Pregenerated sensors for IFNL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059128

Ensembl transcript IDs: ENSMUST00000081684.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTGGCTCAGTGTATGAAGAGGCTGGCCCAGGATGGTGGCCAGGGCTaGGTCAGTCATGTTCTCCCAGACCTTCAGGGTCAGGGCCACCTC	+
Preference number: 5 (lower is better) Translates to: VAQCMKRLAQDGGQG*VSHVLPDLQGQGHL Trigger: GAGGTGGCCCTGACCCTGAAGGTCTGGGAGAACATGACTGACTCAGCCCTGGCCACCATCCTGGGCCAGCCTCTTCATACACTGAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS CCA 90 bp	GAGCAATGTGGCAATCCTTTGCTTCCACTGGGAGCCTGGTGGCCCTaGGGACAGGGTCAGCTTGGGTTCTTGTCAGCACTGCGGCCAGCA	+
Preference number: 5 (lower is better) Translates to: EQCGNPLLPLGAWWP*GQGQLGFLSALRPA Trigger: TGCTGGCCGCAGTGCTGACAAGAACCCAAGCTGACCCTGTCCCCAGGGCCACCAGGCTCCCAGTGGAAGCAAAGGATTGCCACATTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS GCA 72 bp	CCAGCGGGAGAGGCGGCGGCTCGGGGACCTGGGCTCTaGTGTGGCCTGAAGCTGTGTACAGGTCTGCAGCTG	+
Preference number: 6 (lower is better) Translates to: PAGEAAARGPGL*CGLKLCTGLQL Trigger: CAGCTGCAGACCTGTACACAGCTTCAGGCCACAGCAGAGCCCAGGTCCCCGAGCCGCCGCCTCTCCCGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS CCA 72 bp	GGGAGAGGCGGCGGCTCGGGGACCTGGGCTCTGCTGTaGCCTGAAGCTGTGTACAGGTCTGCAGCTGGGAGT	+
Preference number: 6 (lower is better) Translates to: GRGGGSGTWALL*PEAVYRSAAGS Trigger: ACTCCCAGCTGCAGACCTGTACACAGCTTCAGGCCACAGCAGAGCCCAGGTCCCCGAGCCGCCGCCTCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS CCA 72 bp	TGTGCAGCCAGCGGGAGAGGCGGCGGCTCGGGGACCTaGGCTCTGCTGTGGCCTGAAGCTGTGTACAGGTCT	+
Preference number: 6 (lower is better) Translates to: CAASGRGGGSGT*ALLWPEAVYRS Trigger: AGACCTGTACACAGCTTCAGGCCACAGCAGAGCCCAGGTCCCCGAGCCGCCGCCTCTCCCGCTGGCTGCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS CCA 72 bp	GGCAATCCTTTGCTTCCACTGGGAGCCTGGTGGCCCTaGGGACAGGGTCAGCTTGGGTTCTTGTCAGCACTG	+
Preference number: 6 (lower is better) Translates to: GNPLLPLGAWWP*GQGQLGFLSAL Trigger: CAGTGCTGACAAGAACCCAAGCTGACCCTGTCCCCAGGGCCACCAGGCTCCCAGTGGAAGCAAAGGATTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081684.3
CDS CCA 72 bp	GAATGTGGCTCAGTGTATGAAGAGGCTGGCCCAGGATaGTGGCCAGGGCTGAGTCAGTCATGTTCTCCCAGA	+
Preference number: 6 (lower is better) Translates to: ECGSVYEEAGPG*WPGLSQSCSPR Trigger: TCTGGGAGAACATGACTGACTCAGCCCTGGCCACCATCCTGGGCCAGCCTCTTCATACACTGAGCCACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081684.3

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