Pregenerated sensors for IFNAR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022971Ensembl transcript IDs: ENSMUST00000023693.14, ENSMUST00000089042.7, ENSMUST00000117836.8, ENSMUST00000134491.9
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCAGATGACCCATCTTCAGTCCATAGATCCTGGGAAGGAAGGCTaGGGAGGGGCGGCTGTGTCCTGTCCCCACCAGCTATCCGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: SQMTHLQSIDPGKEG*GGAAVSCPHQLSEG Trigger: ACCTTCGGATAGCTGGTGGGGACAGGACACAGCCGCCCCTCCCCAGCCTTCCTTCCCAGGATCTATGGACTGAAGATGGGTCATCTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR GCA 90 bp | CCTGCTCCAGCTTCATCAGATTCCTCAGCGCCTGAATCTTCTTCATaGAGGGGATCCTCGGGGCTGGCTGAGGTGTCAGAGGTTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: PAPASSDSSAPESSS*RGSSGLAEVSEVCC Trigger: GCAACAAACCTCTGACACCTCAGCCAGCCCCGAGGATCCCCTGCATGAAGAAGATTCAGGCGCTGAGGAATCTGATGAAGCTGGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR GCA 90 bp | ACCCTACACCCTTCATCCACTTTGGGCATCTCTCCCAAGGCTACCTaGTCAGTCCCTTTATTTCATAAGTTGAGAAAACTGAAGGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: TLHPSSTLGISPKAT*SVPLFHKLRKLKVK Trigger: TTTAACCTTCAGTTTTCTCAACTTATGAAATAAAGGGACTGAGCAGGTAGCCTTGGGAGAGATGCCCAAAGTGGATGAAGGGTGTAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | CCGTCCCCCACATCAGCATCGGAATCTGAGGTGTCTGATTTCTCAGATGACCCACTCTGTGGGGAGTTCTaGCTCAGCTCCAGCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PSPTSASESEVSDFSDDPLCGEF*LSSSPC Trigger: GCAGGGGCTGGAGCTGAGCCAGAACTCCCCACAGAG...TGGGTCATCTGAGAAATCAGACACCTCAGATTCCGATGCTGATGTGGGGGACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | TCCGCCCCCTTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTCCATGACAGACACCTaGAGACCACAAGGCATCAAG | + |
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Preference number: 2 (lower is better) Translates to: SAPFQVHSWSPPEHCLASSMTDT*RPQGIK Trigger: CTTGATGCCTTGTGGTCTCCAGGTGTCTGTCATGGA...ACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAAGGGGGCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | CGAGAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTCCTGGGAAGGAAGGCTaGGGAGGGGCGGCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: REMTLKYGHDIPLSESRVPGKEG*GGAAVS Trigger: GGACACAGCCGCCCCTCCCCAGCCTTCCTTCCCAGG...AACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGCCAGCTCAGCATGCCTTACCTCTGACCCTTCCGCCCCCTTTCAGGTTCCCAAATTGTCAATCTaGATAGAGAAGGCCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: PAASSACLTSDPSAPFQVPKLSI*IEKANQ Trigger: CTGATTGGCCTTCTCTATGCAGATTGACAATTTGGG...AACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTCAGCTCCAGCCCCTaGTCCAGCTTCATCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: PPFRFIPGVLLNTAWPVFLSSSP*SSFIRF Trigger: GAATCTGATGAAGCTGGAGCAGGGGCTGGAGCTGAG...AAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAACTCCCAGCAATTATGCAAAGCTTAAAAGAAAGCTGCTGCTCCGGGAGAGCATGCCTTACCTCTaGCCCTTCCGCCCCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: KPTPSNYAKLKRKLLLRESMPYL*PFRPLS Trigger: TGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCT...CTCCCGGAGCAGCAGCTTTCTTTTAAGCTTTGCATAATTGCTGGGAGTTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
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| 3UTR-3UTR TCA 90 bp | AATGTGAAACACTGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTACACCAGAGGAGACAGATGTTaGCATCTGGGAAGGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NVKHWFGGEKSKMGGPYTRGDRC*HLGRAQ Trigger: CTGGGCCCTTCCCAGATGTCAACATCTGTCTCCTCT...GGTGTAGGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCAGTGTTTCACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR GCA 90 bp | AACACAAACCACCTTAGTGCATTAGTGGAAAGGGGGTGGGCAGATCACGCTCATGTAGCCAGTGACACTTaGTGTGGGGACCTCTTCGTC | + |
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Preference number: 2 (lower is better) Translates to: NTNHLSALVERGWADHAHVASDT*CGDLFV Trigger: GACGAAGAGGTCCCCACAGCAAGTGTCACTGGCTAC...ATGAGCGTGATCTGCCCACCCCCTTTCCACTAATGCACTAAGGTGGTTTGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR GCA 90 bp | ACAAACCACCTTAGTGCATTAGTGGAAAGGGGGTGGGCAGATCACGCTCATGACTTTGTTGCAGAGGCTTaGCCGTCAGTCCATGCATGG | + |
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Preference number: 2 (lower is better) Translates to: TNHLSALVERGWADHAHDFVAEA*PSVHAW Trigger: CCATGCATGGACTGACGGGCAAGCCTCTGCAACAAA...GTCATGAGCGTGATCTGCCCACCCCCTTTCCACTAATGCACTAAGGTGGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGTTCTCTAGTCCCTCCATGACAGACACCTGGAGACCACAAGGCATCAAGAGGGATAGGAGACCTTaGGCTGCCTCTGAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: VEFSSPSMTDTWRPQGIKRDRRP*AASENH Trigger: GTGGTTTTCAGAGGCAGCCCAAGGTCTCCTATCCCT...CTTGATGCCTTGTGGTCTCCAGGTGTCTGTCATGGAGGGACTAGAGAACTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTACACCCTTCATCCACTTACAGATGTTGACATCTaGGAAGGGCCCAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WFGGEKSKMGGPYTLHPLTDVDI*EGPRQQ Trigger: CTGCTGTCTGGGCCCTTCCCAGATGTCAACATCTGT...AAGTGGATGAAGGGTGTAGGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAATGTGAAACACTGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTCTCTAGTCCCTCCATaGCAGACACCTGGAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: EENVKHWFGGEKSKMGGPSLVPP*QTPGDH Trigger: GTGGTCTCCAGGTGTCTGTCATGGAGGGACTAGAGA...GGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCAGTGTTTCACATTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTTTCGCATGGTGTAGCCAGTaGCACTTGCTGTGGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: FQVHSWSPPEHCLASFSFAWCSQ*HLLWGP Trigger: AGGTCCCCACAGCAAGTGTCACTGGCTACACCATGC...GAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTTTCGCAGCCAGCTCAGCATaGCTTACCTCTGACCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FQVHSWSPPEHCLASFSFAASSA*LTSDPS Trigger: GGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTGC...GAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | CGAGAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTTCTCTAGTCCCTCCATaGCAGACACCTGGAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: REMTLKYGHDIPLSESRVSLVPP*QTPGDH Trigger: GTGGTCTCCAGGTGTCTGTCATGGAGGGACTAGAGA...AACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCCCTGTAAACAATCCTaGTGCCCAAATTGTCAATCT | + |
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Preference number: 2 (lower is better) Translates to: PPFRFIPGVLLNTAWPVFPCKQS*CPNCQS Trigger: AGATTGACAATTTGGGCATCAGGATTGTTTACAGGG...AAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAAGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | GAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTGGAAGGGATAGGAGACCTTaGGCTGCCTCTGAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: EMTLKYGHDIPLSESRVGRDRRP*AASENH Trigger: GTGGTTTTCAGAGGCAGCCCAAGGTCTCCTATCCCT...TCCAACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAAAGCTGCTGCTCCGGGAGAATGAGGATAGCTGTATTCAGAGGGCAGAGCTCCTGAACACTGCTTaGCCAGTTTTTCTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KRKLLLRENEDSCIQRAELLNTA*PVFLSL Trigger: AAGGGAAAGAAAAACTGGCCAAGCAGTGTTCAGGAG...CTCTGCCCTCTGAATACAGCTATCCTCATTCTCCCGGAGCAGCAGCTTTCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCTTTGAGCCAGGACCCATGTACCAGTTCTTCTTTGAAAAGAAGAAAATGCCCAGCGCCAGTCAGTaGACCTCTTTGGAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: EVFEPGPMYQFFFEKKKMPSASQ*TSLESS Trigger: AGATGACTCCAAAGAGGTTCACTGACTGGCGCTGGG...CATTTTCTTCTTTTCAAAGAAGAACTGGTACATGGGTCCTGGCTCAAAGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | CGAGAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTTCCATGACAGACACCTaGAGACCACAAGGCATCAAG | + |
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Preference number: 2 (lower is better) Translates to: REMTLKYGHDIPLSESRVSMTDT*RPQGIK Trigger: CTTGATGCCTTGTGGTCTCCAGGTGTCTGTCATGGA...AACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CAA 90 bp | TCTTCATCATGGAGAACCCTCAGAAACACAGAGTTTAAGTTCACGTaGAAGATAATGTTGTCCCCAGGCTCATCCATGGAGCTGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSSWRTLRNTEFKFT*KIMLSPGSSMELLS Trigger: GGACAACAGCTCCATGGATGAGCCTGGGGACAACATTATCTTCAACGTGAACTTAAACTCTGTGTTTCTGAGGGTTCTCCATGATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCTTTGAGCCAGGACCCATGTACCAGTTCTTCTTTGAAAAGAAGAAAATGTTAGTGGAAAGGGGGTaGGCAGATCACGCTCATGAC | + |
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Preference number: 2 (lower is better) Translates to: EVFEPGPMYQFFFEKKKMLVERG*ADHAHD Trigger: GTCATGAGCGTGATCTGCCCACCCCCTTTCCACTAA...CATTTTCTTCTTTTCAAAGAAGAACTGGTACATGGGTCCTGGCTCAAAGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTTATGGGTGAATGAACTTCCTAGAGTAGAGGAGACAGATGTTGACATCTGGCTCCTGAACACTGCTTaGCCAGTTTTTCTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: ALWVNELPRVEETDVDIWLLNTA*PVFLSL Trigger: AAGGGAAAGAAAAACTGGCCAAGCAGTGTTCAGGAG...CCAGATGTCAACATCTGTCTCCTCTACTCTAGGAAGTTCATTCACCCATAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CAA 90 bp | ATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTaGAACCGCTTTACATGGGTGATCCATTGGAAGTCTTTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: IKSPTRVLSVPQGFL*NRFTWVIHWKSLSQ Trigger: CTGGCTCAAAGACTTCCAATGGATCACCCATGTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR TCA 90 bp | GAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTGGACCCTGTAAACAATCCTaGTGCCCAAATTGTCAATCT | + |
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Preference number: 2 (lower is better) Translates to: EMTLKYGHDIPLSESRVGPCKQS*CPNCQS Trigger: AGATTGACAATTTGGGCATCAGGATTGTTTACAGGG...TCCAACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CAA 90 bp | GGCATCTCTCCCAAGGCTACCTGCTCAGTCCCTTTATTTCATAAGTaGAGAAAACTGAAGGTTAAAGAGGTGACGAGAAATGACCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: GISPKATCSVPLFHK*RKLKVKEVTRNDLK Trigger: TTTAAGGTCATTTCTCGTCACCTCTTTAACCTTCAGTTTTCTCAACTTATGAAATAAAGGGACTGAGCAGGTAGCCTTGGGAGAGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CAA 90 bp | GGGTTTCTTTTGAACCGCTTTACATGGGTGATCCATTGGAAGTCTTaGAGCCAGGACCCATGTACCAGTTCTTCTTTGAAAAGAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GFLLNRFTWVIHWKS*SQDPCTSSSLKRRK Trigger: TTTTCTTCTTTTCAAAGAAGAACTGGTACATGGGTCCTGGCTCAAAGACTTCCAATGGATCACCCATGTAAAGCGGTTCAAAAGAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR TCA 72 bp | TCTTGTGCCAGCAGCCAGCTCAGCATGCCTTACCTCTaGCCCTTCCGCCCCCTTTCAGGTTCATTCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SCASSQLSMPYL*PFRPLSGSFLE Trigger: CTCCAGGAATGAACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTGCTGGCACAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR GCA 72 bp | GCCCGTCAGTCCATGCATGGTGTAGCCAGTGACACTTaGTGTGGGGACCTCTTCGTCACTGTCACTGCCATC | + |
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Preference number: 3 (lower is better) Translates to: ARQSMHGVASDT*CGDLFVTVTAI Trigger: GATGGCAGTGACAGTGACGAAGAGGTCCCCACAGCAAGTGTCACTGGCTACACCATGCATGGACTGACGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR CCA 72 bp | CGCCTGAATCTTCTTCATGCAGGGGATCCTCGGGGCTaGCTGAGGTGTCAGAGGTTTGTTGCAGAGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: RLNLLHAGDPRG*LRCQRFVAEAC Trigger: GCAAGCCTCTGCAACAAACCTCTGACACCTCAGCCAGCCCCGAGGATCCCCTGCATGAAGAAGATTCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR TCA 72 bp | ATCTGGGAAGGGCCCAGACAGCAGGGGCTCAAACCTTaGTGGCTTTTCTTGTGCCAGCAGCCAGCTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: IWEGPRQQGLKP*WLFLCQQPAQH Trigger: ATGCTGAGCTGGCTGCTGGCACAAGAAAAGCCATCAAGGTTTGAGCCCCTGCTGTCTGGGCCCTTCCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR GCA 72 bp | GCTTCATCAGATTCCTCAGCGCCTGAATCTTCTTCATaGAGGGGATCCTCGGGGCTGGCTGAGGTGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ASSDSSAPESSS*RGSSGLAEVSE Trigger: CTCTGACACCTCAGCCAGCCCCGAGGATCCCCTGCATGAAGAAGATTCAGGCGCTGAGGAATCTGATGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR GCA 72 bp | TTGATGGCTTTTCTTGTGCCAGCAGCCAGCTCAGCATaGCTTACCTCTGACCCTTCCGCCCCCTTTCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: LMAFLVPAASSA*LTSDPSAPFQV Trigger: AACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTGCTGGCACAAGAAAAGCCATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CCA 72 bp | TGTCCCCAGGCTCATCCATGGAGCTGTTGTCCTCCCTaGGGAATGAGTCCTCGAGCACACTCTTTCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CPQAHPWSCCPP*GMSPRAHSFFS Trigger: AGAGAAGAAAGAGTGTGCTCGAGGACTCATTCCCCAGGGAGGACAACAGCTCCATGGATGAGCCTGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR TCA 72 bp | CAGCGCCAGTCAGTGAACCTCTTTGGAGTCATCTCATaGTGTAGCCGTCCCCCACATCAGCATCGGAATCTG | + |
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Preference number: 3 (lower is better) Translates to: QRQSVNLFGVIS*CSRPPHQHRNL Trigger: CAGATTCCGATGCTGATGTGGGGGACGGCTACATCATGAGATGACTCCAAAGAGGTTCACTGACTGGCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR GCA 72 bp | TATTCCTGCGGCTTCTCCCCCTCCTCACGTGCACTGTaGGGGGCTTTATGGGTGAATGAACTTCCTAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: YSCGFSPSSRAL*GALWVNELPRV Trigger: TACTCTAGGAAGTTCATTCACCCATAAAGCCCCGCACAGTGCACGTGAGGAGGGGGAGAAGCCGCAGGAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CCA 72 bp | ACCTCTGACCCTTCCGCCCCCTTTCAGGTTCATTCCTaGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: TSDPSAPFQVHS*SPPEHCLASFS Trigger: AGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAAGGGGGCGGAAGGGTCAGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CCA 72 bp | TTCTCCCCCTCCTCACGTGCACTGTGCGGGGCTTTATaGGTGAATGAACTTCCTAGAGTAGAGGAGACAGAT | + |
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Preference number: 3 (lower is better) Translates to: FSPSSRALCGAL*VNELPRVEETD Trigger: ATCTGTCTCCTCTACTCTAGGAAGTTCATTCACCCATAAAGCCCCGCACAGTGCACGTGAGGAGGGGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR CCA 72 bp | CTGACTCTGTCCTCTGGGGACCTTCGTCTAGGAGGATaGTGTCTTCTTCGAGAGATAATGTCTCTGAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LTLSSGDLRLGG*CLLREIMSLRH Trigger: ATGCCTCAGAGACATTATCTCTCGAAGAAGACACCATCCTCCTAGACGAAGGTCCCCAGAGGACAGAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTACACCCTTCATCCACTTTGGTACATGGGTGATCCATaGGAAGTCTTTGAGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: FGGEKSKMGGPYTLHPLWYMGDP*EVFEPG Trigger: TCCTGGCTCAAAGACTTCCAATGGATCACCCATGTA...CCAAAGTGGATGAAGGGTGTAGGGTCCTCCCATCTTACTCTTCTCACCCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CAA 90 bp | CCCCCTTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTACGTTGAAGATAATGTaGTCCCCAGGCTCATCCATG | + |
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Preference number: 3 (lower is better) Translates to: PPFRFIPGVLLNTAWPVFTLKIM*SPGSSM Trigger: CATGGATGAGCCTGGGGACAACATTATCTTCAACGT...AAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR TCA 72 bp | CGTAATTCCACAGTCTCTTCTTCTTGTTTGTGGGGATaGTTTCCAGCCGATCGATGGCTTCTGAAGGTGACC | + |
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Preference number: 3 (lower is better) Translates to: RNSTVSSSCLWG*FPADRWLLKVT Trigger: GGTCACCTTCAGAAGCCATCGATCGGCTGGAAATCATCCCCACAAACAAGAAGAAGAGACTGTGGAATTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| 3UTR-3UTR CAA 90 bp | GAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTGGAGCAGGGGCTCAAACCTaGATGGCTTTTCTTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: EMTLKYGHDIPLSESRVGAGAQT*MAFLVP Trigger: TGGCACAAGAAAAGCCATCAAGGTTTGAGCCCCTGC...TCCAACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAAATGTGAAACACTGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCCACAGTCTCTTCTTCTaGTTTGTGGGGATGATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EENVKHWFGGEKSKMGGPHSLFF*FVGMIS Trigger: GGAAATCATCCCCACAAACAAGAAGAAGAGACTGTG...GGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCAGTGTTTCACATTTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTATCACACAGGATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCATCCATGGAGCTGTaGTCCTCCCTGGGGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: FITQDKKSDKGFISPTRVSSMEL*SSLGNE Trigger: CTCATTCCCCAGGGAGGACAACAGCTCCATGGATGA...AACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTATCCTGTGTGATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTATCACACAGGATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTGCAGGGGCTCAAACCTaGATGGCTTTTCTTGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FITQDKKSDKGFISPTRVAGAQT*MAFLVP Trigger: TGGCACAAGAAAAGCCATCAAGGTTTGAGCCCCTGC...AACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTATCCTGTGTGATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAACCCTCAGAAACACAGAGTTTAAGTTCACGTTGAAGATAATGTTGTCCCCACCTCCTGAACACTGCTaGGCCAGTTTTTCTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTLRNTEFKFTLKIMLSPPPEHC*ASFSFP Trigger: AGGGAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGG...TGGGGACAACATTATCTTCAACGTGAACTTAAACTCTGTGTTTCTGAGGGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
||
| 3UTR GCA 72 bp | CAACTCCCAGCAATTATGCAAAGCTTAAAAGAAAGCTaGTGCTCCGGGAGAATGAGGATAGCTGTATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLPAIMQSLKES*CSGRMRIAVFR Trigger: TCTGAATACAGCTATCCTCATTCTCCCGGAGCAGCAGCTTTCTTTTAAGCTTTGCATAATTGCTGGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | CAGACACCTGGAGACCACAAGGCATCAAGTCGGACTCTGAAGAGAAACCCTGTACCTGGGAAGGAAGGCTaGGGAGGGGCGGCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTPGDHKASSRTLKRNPVPGKEG*GGAAVS Trigger: GGACACAGCCGCCCCTCCCCAGCCTTCCTTCCCAGG...TACAGGGTTTCTCTTCAGAGTCCGACTTGATGCCTTGTGGTCTCCAGGTGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAAGTCGGACTCTGAAGAGAAACCCTGTAGGTGCCCAGCGCCAGTCATCTCATAGGGGCCAGTaGGGTCTTCTGAAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KASSRTLKRNPVGAQRQSSHRGQ*GLLKAP Trigger: CGGGGCCTTCAGAAGACCCCACTGGCCCCTATGAGA...TGACTGGCGCTGGGCACCTACAGGGTTTCTCTTCAGAGTCCGACTTGATGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| 3UTR CAA 72 bp | CATCTGGGAAGGGCCCAGACAGCAGGGGCTCAAACCTaGATGGCTTTTCTTGTGCCAGCAGCCAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLGRAQTAGAQT*MAFLVPAASSA Trigger: TGCTGAGCTGGCTGCTGGCACAAGAAAAGCCATCAAGGTTTGAGCCCCTGCTGTCTGGGCCCTTCCCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGCTCAGCATGCCTTACCTCTGACCCTTCCGCCCCCTTTCAGGTTCATTCCTTTCGTCTTTGCTCATaGCTGTGTACCAGAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSACLTSDPSAPFQVHSFRLCS*LCTRGC Trigger: ACACCCTCTGGTACACAGTCATGAGCAAAGACGAAA...GGAATGAACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGCTCAGCATGCCTTACCTCTGACCCTTCCGCCCCCTTTCAGGTTCATTGATTCCTGGCCAGGCTaGAGGACGATGCATTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPAQHALPLTLPPPFRFIDSWPG*RTMHFK Trigger: CTTAAAATGCATCGTCCTTCAGCCTGGCCAGGAATC...AATGAACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | AACACAAACCACCTTAGTGCATTAGTGGAAAGGGGGTGGGCAGATCACGCTCATCCCCAGGCTCATCCATaGAGCTGTTGTCCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTNHLSALVERGWADHAHPQAHP*SCCPPW Trigger: CCAGGGAGGACAACAGCTCCATGGATGAGCCTGGGG...ATGAGCGTGATCTGCCCACCCCCTTTCCACTAATGCACTAAGGTGGTTTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTTTCCCTGTCAAGTCCCCTCTGTaGACTATGACGATGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: QVHSWSPPEHCLASFSFPVKSPL*TMTMAT Trigger: CGTCGCCATCGTCATAGTGCACAGAGGGGACTTGAC...AGGGAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR GCA 90 bp | AATGTGAAACACTGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTACACCGTCAAGTCCCCTCTGTaGACTATGACGATGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: NVKHWFGGEKSKMGGPYTVKSPL*TMTMAT Trigger: CGTCGCCATCGTCATAGTGCACAGAGGGGACTTGAC...GGTGTAGGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCAGTGTTTCACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATGTGAAACACTGGTTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTCTGACTCTGTCCTCTaGGGACCTTCGTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EENVKHWFGGEKSKMGGPSDSVL*GPSSRR Trigger: CCTCCTAGACGAAGGTCCCCAGAGGACAGAGTCAGA...GGGTCCTCCCATCTTACTCTTCTCACCCCCAAACCAGTGTTTCACATTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR TCA 90 bp | GTAGAGTTCTCTAGTCCCTCCATGACAGACACCTGGAGACCACAAGGCATCAAGTTTCGTCTTTGCTCATaGCTGTGTACCAGAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VEFSSPSMTDTWRPQGIKFRLCS*LCTRGC Trigger: ACACCCTCTGGTACACAGTCATGAGCAAAGACGAAA...CTTGATGCCTTGTGGTCTCCAGGTGTCTGTCATGGAGGGACTAGAGAACTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR GCA 90 bp | CCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTTGAACCGCTTTACATGGGTAGCCAGTGACACTTaGTGTGGGGACCTCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTRVLSVPQGFLLNRFTWVASDT*CGDLFV Trigger: GACGAAGAGGTCCCCACAGCAAGTGTCACTGGCTAC...CCATGTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAAGTCGGACTCTGAAGAGAAACCCTGTAGGTGCCCAGCGCCAGTCAAGTGCAAGGTTCATCTaGATACCCATCAAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KASSRTLKRNPVGAQRQSSARFI*IPIKSR Trigger: TCTGCTTTTGATGGGTATCCAGATGAACCTTGCACT...TGACTGGCGCTGGGCACCTACAGGGTTTCTCTTCAGAGTCCGACTTGATGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | TTTATCACACAGGATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTCTCTGTGGGGAGTTCTaGCTCAGCTCCAGCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FITQDKKSDKGFISPTRVLCGEF*LSSSPC Trigger: GCAGGGGCTGGAGCTGAGCCAGAACTCCCCACAGAG...AACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTATCCTGTGTGATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | CAACTCCCAGCAATTATGCAAAGCTTAAAAGAAAGCTGCTGCTCCGGGAGAATGTCAGTCCATAGATCCTaGGAAGGAAGGCTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPAIMQSLKESCCSGRMSVHRS*EGRLGR Trigger: CCTCCCCAGCCTTCCTTCCCAGGATCTATGGACTGA...CATTCTCCCGGAGCAGCAGCTTTCTTTTAAGCTTTGCATAATTGCTGGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR TCA 90 bp | TCTCCCAAGGCTACCTGCTCAGTCCCTTTATTTCATAAGTTGAGAAAACTGAAGGCATGGTGTAGCCAGTaGCACTTGCTGTGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKATCSVPLFHKLRKLKAWCSQ*HLLWGP Trigger: AGGTCCCCACAGCAAGTGTCACTGGCTACACCATGC...CTTCAGTTTTCTCAACTTATGAAATAAAGGGACTGAGCAGGTAGCCTTGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGTCAAGTCCCCTCTGTaGACTATGACGATGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: AAQWCAFIGRSTFSVLELVKSPL*TMTMAT Trigger: CGTCGCCATCGTCATAGTGCACAGAGGGGACTTGAC...AAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
||
| CDS-3UTR GCA 90 bp | CGAGAAATGACCTTAAAATATGGCCATGATATCCCTCTCTCTGAGTCACGCGTTCTCAGCTCCAGCCCCTaGTCCAGCTTCATCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: REMTLKYGHDIPLSESRVLSSSP*SSFIRF Trigger: GAATCTGATGAAGCTGGAGCAGGGGCTGGAGCTGAG...AACGCGTGACTCAGAGAGAGGGATATCATGGCCATATTTTAAGGTCATTTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGCTCAAACCTTGATGGCTTTTCTTGTGCCAGCAGCCAGCTCAGCATGGGAAGTTCAAGACATTaGGCAAATTGTCTTTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNLDGFSCASSQLSMGSSRH*ANCLLG Trigger: GCCTAAAAGACAATTTGCCCAATGTCTTGAACTTCC...CATGCTGAGCTGGCTGCTGGCACAAGAAAAGCCATCAAGGTTTGAGCCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGAGAAACCTAGCCATACCTaGTTCCTGGCCAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQWCAFIGRSTFSVLELEKPSHT*FLARLK Trigger: CTTCAGCCTGGCCAGGAATCAGGTATGGCTAGGTTT...CTCAAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAAACCTTGATGGCTTTTCTTGTGCCAGCAGCCAGCTCAGCATGCCTTACCATCCAGGTTAAAAAGTaGCGGAAGTTCAAGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: AQTLMAFLVPAASSACLTIQVKK*RKFKTL Trigger: CAATGTCTTGAACTTCCGCCACTTTTTAACCTGGAT...GGTAAGGCATGCTGAGCTGGCTGCTGGCACAAGAAAAGCCATCAAGGTTTGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR TCA 90 bp | ACACTGAACCTGTTCCCTGGGAAATGTAACACAAACCACCTTAGTGCATTAGTGGATTCCTGGCCAGGCTaGAGGACGATGCATTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLNLFPGKCNTNHLSALVDSWPG*RTMHFK Trigger: CTTAAAATGCATCGTCCTTCAGCCTGGCCAGGAATC...CACTAATGCACTAAGGTGGTTTGTGTTACATTTCCCAGGGAACAGGTTCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR TCA 90 bp | TTTATCACACAGGATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTAAGTGGCGGAAGTTCTaGTTCCTGGCCAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FITQDKKSDKGFISPTRVKWRKF*FLARLK Trigger: CTTCAGCCTGGCCAGGAATCAGAACTTCCGCCACTT...AACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTATCCTGTGTGATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTTTCCCTTTTGGAAGTGACAGGTaGAAATTCCATCGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVHSWSPPEHCLASFSFPFGSDR*KFHRHV Trigger: AACGTGACGATGGAATTTCCACCTGTCACTTCCAAA...AGGGAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGAGTTTCGTCTTTGCTCATaGCTGTGTACCAGAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQWCAFIGRSTFSVLELEFRLCS*LCTRGC Trigger: ACACCCTCTGGTACACAGTCATGAGCAAAGACGAAA...CTCAAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
||
| 3UTR CAA 72 bp | CCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTaGAACCGCTTTACATGGGTGATCCATTGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTRVLSVPQGFL*NRFTWVIHWKS Trigger: AGACTTCCAATGGATCACCCATGTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| 3UTR CAA 72 bp | TGGAGAACCCTCAGAAACACAGAGTTTAAGTTCACGTaGAAGATAATGTTGTCCCCAGGCTCATCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WRTLRNTEFKFT*KIMLSPGSSME Trigger: CTCCATGGATGAGCCTGGGGACAACATTATCTTCAACGTGAACTTAAACTCTGTGTTTCTGAGGGTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | CCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTTGAACCGCTTTACATGGAGTGCAAGGTTCATCTaGATACCCATCAAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTRVLSVPQGFLLNRFTWSARFI*IPIKSR Trigger: TCTGCTTTTGATGGGTATCCAGATGAACCTTGCACT...CCATGTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGTTCATTCCTGGAGTCCTCCTGAACACTGCTTGGCCAGTTTTTCTTTCTTTGGAAGTGACAGGTaGAAATTCCATCGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVHSWSPPEHCLASFSFFGSDR*KFHRHV Trigger: AACGTGACGATGGAATTTCCACCTGTCACTTCCAAA...GAAAGAAAAACTGGCCAAGCAGTGTTCAGGAGGACTCCAGGAATGAACCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGAGAGTGCAAGGTTCATCTaGATACCCATCAAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQWCAFIGRSTFSVLELESARFI*IPIKSR Trigger: TCTGCTTTTGATGGGTATCCAGATGAACCTTGCACT...CTCAAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCACACAGGATAAAAAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTGAGGCATCTTCATCATaGAGAACCCTCAGAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: FITQDKKSDKGFISPTRVEASSS*RTLRNT Trigger: TGTGTTTCTGAGGGTTCTCCATGATGAAGATGCCTC...AACCCTTGTGGGACTGATAAAACCCTTGTCGGACTTTTTATCCTGTGTGATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTTGAGCCAGGACCCATGTACCAGTTCTTCTTTGAAAAGAAGAAAATGCTTCGTCTAGGAGGATaGTGTCTTCTTCGAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: EVFEPGPMYQFFFEKKKMLRLGG*CLLREI Trigger: TATCTCTCGAAGAAGACACCATCCTCCTAGACGAAG...CATTTTCTTCTTTTCAAAGAAGAACTGGTACATGGGTCCTGGCTCAAAGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CCA 90 bp | CCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTTGAACCGCTTTACATGGGTCTTCATCTTTTCCTaGATTATTTTGGAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTRVLSVPQGFLLNRFTWVFIFS*IILEVT Trigger: TGTCACTTCCAAAATAATCCAGGAAAAGATGAAGAC...CCATGTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | AAGTCCGACAAGGGTTTTATCAGTCCCACAAGGGTTTCTTTTGAACCGCTTTACGTCTTCATCTTTTCCTaGATTATTTTGGAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSDKGFISPTRVSFEPLYVFIFS*IILEVT Trigger: TGTCACTTCCAAAATAATCCAGGAAAAGATGAAGAC...GTAAAGCGGTTCAAAAGAAACCCTTGTGGGACTGATAAAACCCTTGTCGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGTCTTCATCTTTTCCTaGATTATTTTGGAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AAQWCAFIGRSTFSVLELVFIFS*IILEVT Trigger: TGTCACTTCCAAAATAATCCAGGAAAAGATGAAGAC...AAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
||
| CDS-3UTR CAA 90 bp | CAGACACCTGGAGACCACAAGGCATCAAGTCGGACTCTGAAGAGAAACCCTGTAGCGGGTGGGCCAGACTaGTTCTCTAATTCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QTPGDHKASSRTLKRNPVAGGPD*FSNSQD Trigger: ATCCTGGGAATTAGAGAACAAGTCTGGCCCACCCGC...TACAGGGTTTCTCTTCAGAGTCCGACTTGATGCCTTGTGGTCTCCAGGTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGGTGAGAAGAGTAAGATGGGAGGACCCTACACCCTTCATCCACTTTGGGCGGGTGGGCCAGACTaGTTCTCTAATTCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FGGEKSKMGGPYTLHPLWAGGPD*FSNSQD Trigger: ATCCTGGGAATTAGAGAACAAGTCTGGCCCACCCGC...CCAAAGTGGATGAAGGGTGTAGGGTCCTCCCATCTTACTCTTCTCACCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGCCAGCTCAGCATGCCTTACCTCTGACCCTTCCGCCCCCTTTCAGGTTCGGAAGTTCAAGACATaGGGCAAATTGTCTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAASSACLTSDPSAPFQVRKFKT*GKLSFR Trigger: CCTAAAAGACAATTTGCCCAATGTCTTGAACTTCCG...AACCTGAAAGGGGGCGGAAGGGTCAGAGGTAAGGCATGCTGAGCTGGCTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CAA 90 bp | GGTGAGAAGAGTAAGATGGGAGGACCCTACACCCTTCATCCACTTTGGGCATCTTCATCCATGGAGCTGTaGTCCTCCCTGGGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GEKSKMGGPYTLHPLWASSSMEL*SSLGNE Trigger: CTCATTCCCCAGGGAGGACAACAGCTCCATGGATGA...AGATGCCCAAAGTGGATGAAGGGTGTAGGGTCCTCCCATCTTACTCTTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGCCAAGAGGGCTGTAGAGTTCTCTAGTCCCTCCATGACAGACACCTGGCACAGTCTCTTCTTCTaGTTTGTGGGGATGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARAKRAVEFSSPSMTDTWHSLFF*FVGMIS Trigger: GGAAATCATCCCCACAAACAAGAAGAAGAGACTGTG...CCAGGTGTCTGTCATGGAGGGACTAGAGAACTCTACAGCCCTCTTGGCCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
||
| CDS-3UTR CAA 90 bp | CTTCCTAGAGTAGAGGAGACAGATGTTGACATCTGGGAAGGGCCCAGACAGCAGTCCCCTATCTGTTCTTaGATGACAAAGGGTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRVEETDVDIWEGPRQQSPICS*MTKGVV Trigger: GACTACACCCTTTGTCATCAAAGAACAGATAGGGGA...CTGCTGTCTGGGCCCTTCCCAGATGTCAACATCTGTCTCCTCTACTCTAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| CDS-3UTR CAA 90 bp | GCAGCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGCGGGTGGGCCAGACTaGTTCTCTAATTCCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: AAQWCAFIGRSTFSVLELAGGPD*FSNSQD Trigger: ATCCTGGGAATTAGAGAACAAGTCTGGCCCACCCGC...AAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
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| CDS-3UTR CAA 90 bp | GGTGAGAAGAGTAAGATGGGAGGACCCTACACCCTTCATCCACTTTGGGCATCTTCCCCTATCTGTTCTTaGATGACAAAGGGTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: GEKSKMGGPYTLHPLWASSPICS*MTKGVV Trigger: GACTACACCCTTTGTCATCAAAGAACAGATAGGGGA...AGATGCCCAAAGTGGATGAAGGGTGTAGGGTCCTCCCATCTTACTCTTCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| CDS-3UTR CAA 90 bp | TCCATGCATGGTGTAGCCAGTGACACTTGCTGTGGGGACCTCTTCGTCACTGTCTTTTCCTGGATTATTTaGGAAGTGACAGGTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: SMHGVASDTCCGDLFVTVFSWII*EVTGGN Trigger: ATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAA...GACAGTGACGAAGAGGTCCCCACAGCAAGTGTCACTGGCTACACCATGCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089042.7 |
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| CDS GCA 90 bp | AGGACAAATGTGAAGTTCCCAGTGACATTATTCACTTTGGGCTCGTaGTTCTTCCTAACGCTGTCCCCTATCTGTTCTTTGATGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: RTNVKFPVTLFTLGS*FFLTLSPICSLMTK Trigger: CTTTGTCATCAAAGAACAGATAGGGGACAGCGTTAGGAAGAAGCACGAGCCCAAAGTGAATAATGTCACTGGGAACTTCACATTTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGTGGTGTGCATTTATTGGCAGGAGTACATTTAGTGTGCTAGAACTTGAGTCCCCTATCTGTTCTTaGATGACAAAGGGTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: AQWCAFIGRSTFSVLELESPICS*MTKGVV Trigger: GACTACACCCTTTGTCATCAAAGAACAGATAGGGGA...CTCAAGTTCTAGCACACTAAATGTACTCCTGCCAATAAATGCACACCACTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117836.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCAAGGCTACCTGCTCAGTCCCTTTATTTCATAAGTTGAGAAAACTGAAGACGTTGAAGATAATGTaGTCCCCAGGCTCATCCATG | + |
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Preference number: 5 (lower is better) Translates to: SPKATCSVPLFHKLRKLKTLKIM*SPGSSM Trigger: CATGGATGAGCCTGGGGACAACATTATCTTCAACGT...CTTCAGTTTTCTCAACTTATGAAATAAAGGGACTGAGCAGGTAGCCTTGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
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| CDS CCA 90 bp | GGGTGTAGTCTTCATCTTTTCCTGGATTATTTTGGAAGTGACAGGTaGAAATTCCATCGTCACGTTTATGTGGTCTGTAAAGCCAACGAT | + |
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Preference number: 5 (lower is better) Translates to: GCSLHLFLDYFGSDR*KFHRHVYVVCKAND Trigger: ATCGTTGGCTTTACAGACCACATAAACGTGACGATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAGACTACACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CCA 90 bp | ATGGCTTCTGAAGGTGACCGTTCAGGGATTATCCAGGTTAAAAAGTaGCGGAAGTTCAAGACATTGGGCAAATTGTCTTTTAGGCATATA | + |
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Preference number: 5 (lower is better) Translates to: MASEGDRSGIIQVKK*RKFKTLGKLSFRHI Trigger: TATATGCCTAAAAGACAATTTGCCCAATGTCTTGAACTTCCGCCACTTTTTAACCTGGATAATCCCTGAACGGTCACCTTCAGAAGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023693.14 |
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| CDS-3UTR CAA 90 bp | GCTTTATGGGTGAATGAACTTCCTAGAGTAGAGGAGACAGATGTTGACATCTGGTTTTCCTGGATTATTTaGGAAGTGACAGGTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: ALWVNELPRVEETDVDIWFSWII*EVTGGN Trigger: ATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAA...CCAGATGTCAACATCTGTCTCCTCTACTCTAGGAAGTTCATTCACCCATAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 |
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| CDS CCA 90 bp | CCTATCTGTTCTTTGATGACAAAGGGTGTAGTCTTCATCTTTTCCTaGATTATTTTGGAAGTGACAGGTGGAAATTCCATCGTCACGTTT | + |
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Preference number: 5 (lower is better) Translates to: PICSLMTKGVVFIFS*IILEVTGGNSIVTF Trigger: AAACGTGACGATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAGACTACACCCTTTGTCATCAAAGAACAGATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS GCA 72 bp | GTGAAGTTCCCAGTGACATTATTCACTTTGGGCTCGTaGTTCTTCCTAACGCTGTCCCCTATCTGTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VKFPVTLFTLGS*FFLTLSPICSL Trigger: CAAAGAACAGATAGGGGACAGCGTTAGGAAGAAGCACGAGCCCAAAGTGAATAATGTCACTGGGAACTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CAA 72 bp | TCGTGCTTCTTCCTAACGCTGTCCCCTATCTGTTCTTaGATGACAAAGGGTGTAGTCTTCATCTTTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCFFLTLSPICS*MTKGVVFIFSW Trigger: CCAGGAAAAGATGAAGACTACACCCTTTGTCATCAAAGAACAGATAGGGGACAGCGTTAGGAAGAAGCACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CAA 90 bp | TCTTTGATGACAAAGGGTGTAGTCTTCATCTTTTCCTGGATTATTTaGGAAGTGACAGGTGGAAATTCCATCGTCACGTTTATGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLMTKGVVFIFSWII*EVTGGNSIVTFMWS Trigger: AGACCACATAAACGTGACGATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAGACTACACCCTTTGTCATCAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CAA 72 bp | ACAAAGGGTGTAGTCTTCATCTTTTCCTGGATTATTTaGGAAGTGACAGGTGGAAATTCCATCGTCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: TKGVVFIFSWII*EVTGGNSIVTF Trigger: AAACGTGACGATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAGACTACACCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CCA 72 bp | CTTCATCTTTTCCTGGATTATTTTGGAAGTGACAGGTaGAAATTCCATCGTCACGTTTATGTGGTCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LHLFLDYFGSDR*KFHRHVYVVCK Trigger: TTTACAGACCACATAAACGTGACGATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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| CDS CCA 72 bp | TCTTTGATGACAAAGGGTGTAGTCTTCATCTTTTCCTaGATTATTTTGGAAGTGACAGGTGGAAATTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SLMTKGVVFIFS*IILEVTGGNSI Trigger: GATGGAATTTCCACCTGTCACTTCCAAAATAATCCAGGAAAAGATGAAGACTACACCCTTTGTCATCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023693.14 ENSMUST00000089042.7 ENSMUST00000117836.8 ENSMUST00000134491.9 |
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