Pregenerated sensors for IFITM6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059108Ensembl transcript IDs: ENSMUST00000081924.5, ENSMUST00000209328.2, ENSMUST00000211330.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCTCTGGCCAGGATAAGGGGCAACTCTGAGGGGCAGAGCACATaGATGCTTTCTTCACGAAGACAGTGCATGGAAGAATTTAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: GPLARIRGNSEGQST*MLSSRRQCMEEFSS Trigger: ACTACTAAATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAGAGTTGCCCCTTATCCTGGCCAGAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGAATCCACTGTGAACATATGCATGAGGATAAACATTTACAGGAGGGTAGAGGGCAGAGCACATGAATaGTTTCTTCACGAAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: IESTVNICMRINIYRRVEGRAHE*FLHEDS Trigger: ACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCC...CTCTACCCTCCTGTAAATGTTTATCCTCATGCATATGTTCACAGTGGATTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| 3UTR TCA 72 bp | CAGGTTAGGGCCTCTGGCCAGGATAAGGGGCAACTCTaGGGGGCAGAGCACATGAATGCTTTCTTCACGAAG | + |
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Preference number: 3 (lower is better) Translates to: QVRASGQDKGQL*GAEHMNAFFTK Trigger: CTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAGAGTTGCCCCTTATCCTGGCCAGAGGCCCTAACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| 3UTR TCA 72 bp | GCCAGGATAAGGGGCAACTCTGAGGGGCAGAGCACATaGATGCTTTCTTCACGAAGACAGTGCATGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: ARIRGNSEGQST*MLSSRRQCMEE Trigger: TTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAGAGTTGCCCCTTATCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| 3UTR TCA 72 bp | ATATGCATGAGGATAAACATTTACAGGAGGGTAGAGTaGCAGGTTAGGGCCTCTGGCCAGGATAAGGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: ICMRINIYRRVE*QVRASGQDKGQ Trigger: TTGCCCCTTATCCTGGCCAGAGGCCCTAACCTGTCACTCTACCCTCCTGTAAATGTTTATCCTCATGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATTTTGTGTGGCTGACTTaGTTCAGACCAGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRGRAHECFLHEDSAWKNFVWLT*FRPGPE Trigger: CTCTGGCCCTGGTCTGAAGCAAGTCAGCCACACAAA...ATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATGGATGTTCAGAATCTTaGCGGTTGAAGCATGGGATT | + |
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Preference number: 4 (lower is better) Translates to: LRGRAHECFLHEDSAWKNGCSES*RLKHGI Trigger: AATCCCATGCTTCAACCGCCAAGATTCTGAACATCC...ATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR TCA 90 bp | CGAAGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTTGACAGTGCATGGAAGTAGATGTAGGCAATaGAACCCAGGCAGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RRQCMEEFSSPLTLTVHGSRCRQ*NPGSSH Trigger: ATGGCTGCTGCCTGGGTTTCATTGCCTACATCTACT...TCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR TCA 90 bp | CGAAGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTTGACAGTGCATGGAATGTTTTTGTGTGGCTaGCTTGCTTCAGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RRQCMEEFSSPLTLTVHGMFLCG*LASDQG Trigger: GCCCTGGTCTGAAGCAAGTCAGCCACACAAAAACAT...TCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATAACCATGTTTTTGTGTaGCTGACTTGCTTCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LRGRAHECFLHEDSAWKNNHVFV*LTCFRP Trigger: TGGTCTGAAGCAAGTCAGCCACACAAAAACATGGTT...ATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| 3UTR CAA 72 bp | TCACGAAGACAGTGCATGGAAGAATTTAGTAGTCCATaGACTTTGACAGTGCATGGAGTCCCACCCTTAGTA | + |
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Preference number: 4 (lower is better) Translates to: SRRQCMEEFSSP*TLTVHGVPPLV Trigger: TACTAAGGGTGGGACTCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR TCA 90 bp | ATTGAATCCACTGTGAACATATGCATGAGGATAAACATTTACAGGAGGGTAGAGAGTAGATGTAGGCAATaGAACCCAGGCAGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IESTVNICMRINIYRRVESRCRQ*NPGSSH Trigger: ATGGCTGCTGCCTGGGTTTCATTGCCTACATCTACT...CTCTACCCTCCTGTAAATGTTTATCCTCATGCATATGTTCACAGTGGATTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| 3UTR CAA 72 bp | AGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTaGACAGTGCATGGAGTCCCACCCTTAGTATCTAAT | + |
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Preference number: 4 (lower is better) Translates to: RQCMEEFSSPLT*TVHGVPPLVSN Trigger: ATTAGATACTAAGGGTGGGACTCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CCA 90 bp | ATTGAATCCACTGTGAACATATGCATGAGGATAAACATTTACAGGAGGGTAGAGGGATGTTCAGAATCTTaGCGGTTGAAGCATGGGATT | + |
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Preference number: 4 (lower is better) Translates to: IESTVNICMRINIYRRVEGCSES*RLKHGI Trigger: AATCCCATGCTTCAACCGCCAAGATTCTGAACATCC...CTCTACCCTCCTGTAAATGTTTATCCTCATGCATATGTTCACAGTGGATTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATTCAGAATCTTGGCGGTaGAAGCATGGGATTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LRGRAHECFLHEDSAWKNSESWR*KHGIGP Trigger: GGGCCCAATCCCATGCTTCAACCGCCAAGATTCTGA...ATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS TCA 90 bp | ACTGGAGCTGAGTCAGGATCCCTCTTAACCATGTTTTTGTGTGGCTaGCTTGCTTCAGACCAGGGCCAGAGAAAGCTACAAATCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: TGAESGSLLTMFLCG*LASDQGQRKLQITA Trigger: GGCAGTGATTTGTAGCTTTCTCTGGCCCTGGTCTGAAGCAAGTCAGCCACACAAAAACATGGTTAAGAGGGATCCTGACTCAGCTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS TCA 90 bp | GATAACATCACTGTTGATGCAAACCACAGTGGATGGCACTGGAGCTaGGTCAGGATCCCTCTTAACCATGTTTTTGTGTGGCTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: DNITVDANHSGWHWS*VRIPLNHVFVWLTC Trigger: GCAAGTCAGCCACACAAAAACATGGTTAAGAGGGATCCTGACTCAGCTCCAGTGCCATCCACTGTGGTTTGCATCAACAGTGATGTTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | CGAAGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTTGACAGTGCATGGATCAGAATCTTGGCGGTaGAAGCATGGGATTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RRQCMEEFSSPLTLTVHGSESWR*KHGIGP Trigger: GGGCCCAATCCCATGCTTCAACCGCCAAGATTCTGA...TCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATAGGATGTTCAGAATCTaGGCGGTTGAAGCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LRGRAHECFLHEDSAWKNRMFRI*AVEAWD Trigger: ATCCCATGCTTCAACCGCCAAGATTCTGAACATCCT...ATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | CGAAGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTTGACAGTGCATGGAAGGATGTTCAGAATCTaGGCGGTTGAAGCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: RRQCMEEFSSPLTLTVHGRMFRI*AVEAWD Trigger: ATCCCATGCTTCAACCGCCAAGATTCTGAACATCCT...TCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCAGAGCACATGAATGCTTTCTTCACGAAGACAGTGCATGGAAGAATTTATGGATAACATCACTGTaGATGCAAACCACAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: RGRAHECFLHEDSAWKNLWITSL*MQTTVD Trigger: ATCCACTGTGGTTTGCATCAACAGTGATGTTATCCA...TAAATTCTTCCATGCACTGTCTTCGTGAAGAAAGCATTCATGTGCTCTGCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | CGAAGACAGTGCATGGAAGAATTTAGTAGTCCATTGACTTTGACAGTGCATGGATGGATAACATCACTGTaGATGCAAACCACAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: RRQCMEEFSSPLTLTVHGWITSL*MQTTVD Trigger: ATCCACTGTGGTTTGCATCAACAGTGATGTTATCCA...TCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCACTGTCTTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | ATTGAATCCACTGTGAACATATGCATGAGGATAAACATTTACAGGAGGGTAGAGAGGATGTTCAGAATCTaGGCGGTTGAAGCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: IESTVNICMRINIYRRVERMFRI*AVEAWD Trigger: ATCCCATGCTTCAACCGCCAAGATTCTGAACATCCT...CTCTACCCTCCTGTAAATGTTTATCCTCATGCATATGTTCACAGTGGATTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS-3UTR CAA 90 bp | ATTGAATCCACTGTGAACATATGCATGAGGATAAACATTTACAGGAGGGTAGAGTGGATAACATCACTGTaGATGCAAACCACAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: IESTVNICMRINIYRRVEWITSL*MQTTVD Trigger: ATCCACTGTGGTTTGCATCAACAGTGATGTTATCCA...CTCTACCCTCCTGTAAATGTTTATCCTCATGCATATGTTCACAGTGGATTCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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| CDS TCA 72 bp | GAGTCAGGATCCCTCTTAACCATGTTTTTGTGTGGCTaGCTTGCTTCAGACCAGGGCCAGAGAAAGCTACAA | + |
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Preference number: 6 (lower is better) Translates to: ESGSLLTMFLCG*LASDQGQRKLQ Trigger: TTGTAGCTTTCTCTGGCCCTGGTCTGAAGCAAGTCAGCCACACAAAAACATGGTTAAGAGGGATCCTGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS TCA 72 bp | ACTGTTGATGCAAACCACAGTGGATGGCACTGGAGCTaGGTCAGGATCCCTCTTAACCATGTTTTTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TVDANHSGWHWS*VRIPLNHVFVW Trigger: CCACACAAAAACATGGTTAAGAGGGATCCTGACTCAGCTCCAGTGCCATCCACTGTGGTTTGCATCAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211330.2 |
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| CDS TCA 72 bp | TTCATGAACACTGTGTTAAATGTAGACCAGGTAATGTaGTCCGGCTGGATAACATCACTGTTGATGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: FMNTVLNVDQVM*SGWITSLLMQT Trigger: GGTTTGCATCAACAGTGATGTTATCCAGCCGGATCACATTACCTGGTCTACATTTAACACAGTGTTCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081924.5 ENSMUST00000209328.2 ENSMUST00000211330.2 |
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