Pregenerated sensors for IFITM10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045777Ensembl transcript IDs: ENSMUST00000059223.15, ENSMUST00000084412.6, ENSMUST00000105988.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCATGGGCCAGGGAGGGCAGCCACTGGTCACTGGGCAGCATCATaGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACAGGGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VHGPGRAATGHWAAS*KEAHRPGASRTGAG Trigger: GCCTGCCCCTGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGCCCTCCCTGGCCCATGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CCA 90 bp | GTAAGCCCTTCTTGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTaGGCAGGGTGCATGGGCCAGGGAGGGCAGCCACTGGTCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: VSPSCWVSGLRGPGS*AGCMGQGGQPLVTG Trigger: CCCAGTGACCAGTGGCTGCCCTCCCTGGCCCATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR GCA 90 bp | GGTGCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTTaGTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: GAGSPYFGSSRVSPS*WVSGLRGPGSWAGC Trigger: GCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR TCA 90 bp | GTGGCTGGGAAGAGTGCGCCACTCGGTCGGGCACTCAGCTTCTGGTaGCCTTGCTGCCATGCATGGCTCTGGGCCTTGGTGGAAGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: VAGKSAPLGRALSFW*PCCHAWLWALVEAH Trigger: ATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCGAGTGGCGCACTCTTCCCAGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CCA 90 bp | GCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTTGCTaGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGCATG | + |
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Preference number: 1 (lower is better) Translates to: AGSPYFGSSRVSPSC*VSGLRGPGSWAGCM Trigger: CATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR GCA 90 bp | TGCGCCACTCGGTCGGGCACTCAGCTTCTGGTGACCTTGCTGCCATaGATGGCTCTGGGCCTTGGTGGAAGCCCATTCTGCCCCACAATC | + |
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Preference number: 1 (lower is better) Translates to: CATRSGTQLLVTLLP*MALGLGGSPFCPTI Trigger: GATTGTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCGAGTGGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR TCA 90 bp | GAGGATGGGTGGGGGTGGGAGTGGGCAGCAGAGCTAGTCCCGGGCTaGTGTGTGTTTGCTGCTCTTGCAGAGGACCGAAGTTTGGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: EDGWGWEWAAELVPG*CVFAALAEDRSLAH Trigger: GTGAGCCAAACTTCGGTCCTCTGCAAGAGCAGCAAACACACATCAGCCCGGGACTAGCTCTGCTGCCCACTCCCACCCCCACCCATCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | AGATGGCTCAGCATGCCAAGACACTCGTTGCCAGGCCTGATGGCCTaGGTTCAGACCCAGGGCCCATATGGGAGAAAGGGGAGAAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: RWLSMPRHSLPGLMA*VQTQGPYGRKGRKG Trigger: GCCCTTTCTCCCCTTTCTCCCATATGGGCCCTGGGTCTGAACTCAGGCCATCAGGCCTGGCAACGAGTGTCTTGGCATGCTGAGCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | CTCGTTGCCAGGCCTGATGGCCTGAGTTCAGACCCAGGGCCCATATaGGAGAAAGGGGAGAAAGGGCACCATCTGACCTCTGCATGCACA | + |
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Preference number: 1 (lower is better) Translates to: LVARPDGLSSDPGPI*EKGEKGHHLTSACT Trigger: TGTGCATGCAGAGGTCAGATGGTGCCCTTTCTCCCCTTTCTCCCATATGGGCCCTGGGTCTGAACTCAGGCCATCAGGCCTGGCAACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR GCA 90 bp | GTGGGAGTGGGCAGCAGAGCTAGTCCCGGGCTGATGTGTGTTTGCTaGTCTTGCAGAGGACCGAAGTTTGGCTCACAGCATTCACATGGG | + |
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Preference number: 1 (lower is better) Translates to: VGVGSRASPGLMCVC*SCRGPKFGSQHSHG Trigger: CCCATGTGAATGCTGTGAGCCAAACTTCGGTCCTCTGCAAGAGCAGCAAACACACATCAGCCCGGGACTAGCTCTGCTGCCCACTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | GAATGTGGTTCCCCGGCCCTGTCTGCCATCCTTCAAGGACGGGTCTaGCCTGTGAGGCATGAGAAACAAGAAAGGCGACAGATTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ECGSPALSAILQGRV*PVRHEKQERRQIAE Trigger: CTCTGCAATCTGTCGCCTTTCTTGTTTCTCATGCCTCACAGGCCAGACCCGTCCTTGAAGGATGGCAGACAGGGCCGGGGAACCACATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | AAAGTTCTGAGCCCCAGAAATGACCGAAGCTCTCTCCTGAACAGCTaGATGAGAGGGCCAGCCCCTGTCTGCTCAGGAAGCTACACCTGG | + |
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Preference number: 1 (lower is better) Translates to: KVLSPRNDRSSLLNS*MRGPAPVCSGSYTW Trigger: CCAGGTGTAGCTTCCTGAGCAGACAGGGGCTGGCCCTCTCATCCAGCTGTTCAGGAGAGAGCTTCGGTCATTTCTGGGGCTCAGAACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | CACTCAGCTTCTGGTGACCTTGCTGCCATGCATGGCTCTGGGCCTTaGTGGAAGCCCATTCTGCCCCACAATCTCAGCATCCTGAATCTC | + |
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Preference number: 1 (lower is better) Translates to: HSASGDLAAMHGSGP*WKPILPHNLSILNL Trigger: GAGATTCAGGATGCTGAGATTGTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR TCA 90 bp | GTGGAAGCCCATTCTGCCCCACAATCTCAGCATCCTGAATCTCAGTaGCCATCAGTCTCAGTGCTGTGTCGCCAAGACCCACTGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: VEAHSAPQSQHPESQ*PSVSVLCRQDPLPA Trigger: AGCAGGCAGTGGGTCTTGGCGACACAGCACTGAGACTGATGGTCACTGAGATTCAGGATGCTGAGATTGTGGGGCAGAATGGGCTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CCA 90 bp | TCAGCTTCTGGTGACCTTGCTGCCATGCATGGCTCTGGGCCTTGGTaGAAGCCCATTCTGCCCCACAATCTCAGCATCCTGAATCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SASGDLAAMHGSGPW*KPILPHNLSILNLS Trigger: ACTGAGATTCAGGATGCTGAGATTGTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR TCA 90 bp | GTCTGTAGCAACACTGCCCAGGTTCGTGACTGCATCCAGACCCACTaGCGGTGCACCTCACAGTGTGAACTGTGTCTTAAGGAAGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VCSNTAQVRDCIQTH*RCTSQCELCLKEAE Trigger: TTCAGCTTCCTTAAGACACAGTTCACACTGTGAGGTGCACCGTCAGTGGGTCTGGATGCAGTCACGAACCTGGGCAGTGTTGCTACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR GCA 90 bp | AAAGGCGACAGATTGCAGAGGAAGATGGAAGACAGGCTGCCTGCCTaGCCATGTGGGAATTCTGCAAGGGTCATCAAAAAGCCACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: KGDRLQRKMEDRLPA*PCGNSARVIKKPLG Trigger: TCCCAGTGGCTTTTTGATGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCCATCTTCCTCTGCAATCTGTCGCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | CTGGCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTGAGTGGTCTTaGTGGAGAGAGAGAGAGTGGCTACTGGCAGTGTCATCTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LAKGGRTRRLVGEWS*WREREWLLAVSSLW Trigger: CCACAAAGATGACACTGCCAGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCCCTTTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | ACTTCTATCACTGGCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTaGGTGGTCTTGGTGGAGAGAGAGAGAGTGGCTACTGGCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TSITGKGRKDKEISG*VVLVERERVATGSV Trigger: GACACTGCCAGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCCCTTTGCCAGTGATAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | CAGACCCAGGGCCCATATGGGAGAAAGGGGAGAAAGGGCACCATCTaGCCTCTGCATGCACACTGGCATTCTCTCTCTTTCTCTCATAAT | + |
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Preference number: 1 (lower is better) Translates to: QTQGPYGRKGRKGTI*PLHAHWHSLSFSHN Trigger: ATTATGAGAGAAAGAGAGAGAATGCCAGTGTGCATGCAGAGGTCAGATGGTGCCCTTTCTCCCCTTTCTCCCATATGGGCCCTGGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR GCA 90 bp | CAAGAAAGGCGACAGATTGCAGAGGAAGATGGAAGACAGGCTGCCTaGCTGCCCATGTGGGAATTCTGCAAGGGTCATCAAAAAGCCACT | + |
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Preference number: 1 (lower is better) Translates to: QERRQIAEEDGRQAA*LPMWEFCKGHQKAT Trigger: AGTGGCTTTTTGATGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCCATCTTCCTCTGCAATCTGTCGCCTTTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | CTATCACTGGCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTGAGTaGTCTTGGTGGAGAGAGAGAGAGTGGCTACTGGCAGTGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LSLAKGGRTRRLVGE*SWWREREWLLAVSS Trigger: AGATGACACTGCCAGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCCCTTTGCCAGTGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR GCA 90 bp | AAGTCACAGGGACTTCGTGTTCCCTGCCCAAACCCTGGGCTCATGTaGCTCCACAGTGGTATCAAAGACAAATGGGAACATCAAGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: KSQGLRVPCPNPGLM*LHSGIKDKWEHQED Trigger: GTCTTCTTGATGTTCCCATTTGTCTTTGATACCACTGTGGAGGCACATGAGCCCAGGGTTTGGGCAGGGAACACGAAGTCCCTGTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | TGCCTCCACAGTGGTATCAAAGACAAATGGGAACATCAAGAAGACTaGACCAGCATCCTCCATGAACAGCCTGGTACCAGAGTCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: CLHSGIKDKWEHQED*TSILHEQPGTRVRP Trigger: GGGTCTGACTCTGGTACCAGGCTGTTCATGGAGGATGCTGGTCCAGTCTTCTTGATGTTCCCATTTGTCTTTGATACCACTGTGGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | ACTTCGTGTTCCCTGCCCAAACCCTGGGCTCATGTGCCTCCACAGTaGTATCAAAGACAAATGGGAACATCAAGAAGACTGGACCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: TSCSLPKPWAHVPPQ*YQRQMGTSRRLDQH Trigger: ATGCTGGTCCAGTCTTCTTGATGTTCCCATTTGTCTTTGATACCACTGTGGAGGCACATGAGCCCAGGGTTTGGGCAGGGAACACGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | GACTCTAGAGTGAAGGAGACCAGCCACAAAAGACCACATCCCAGATaGGTCCACCAATATTCAACTTCTATCACTGGCAAAGGGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: DSRVKETSHKRPHPR*VHQYSTSITGKGRK Trigger: CTTCCTCCCTTTGCCAGTGATAGAAGTTGAATATTGGTGGACTCATCTGGGATGTGGTCTTTTGTGGCTGGTCTCCTTCACTCTAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | TGGGAATTCTGCAAGGGTCATCAAAAAGCCACTGGGAGCAATGGATaGTGGATAAAAGTGCAGCACACAAGGCCACGTCAACAAAGATGG | + |
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Preference number: 1 (lower is better) Translates to: WEFCKGHQKATGSNG*WIKVQHTRPRQQRW Trigger: CCATCTTTGTTGACGTGGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGATGACCCTTGCAGAATTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 90 bp | ATTGAGAAATGGAAGCACATGTCCACATACACTCTGGCTCACACATaGGGTAGGGAGATGGGTGTAGCAGTTAAAGAAGCTTGCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: IEKWKHMSTYTLAHT*GREMGVAVKEACHQ Trigger: TTGGTGGCAAGCTTCTTTAACTGCTACACCCATCTCCCTACCCCATGTGTGAGCCAGAGTGTATGTGGACATGTGCTTCCATTTCTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR TCA 90 bp | ATCTACGAAAAATATGCAGTGGACTCTGTAGCAAGGACTGGGAGATaGAATGCTTCCCTCAGAGATAAGGAACAAGGCAGGAATGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: IYEKYAVDSVARTGR*NASLRDKEQGRNVV Trigger: AACCACATTCCTGCCTTGTTCCTTATCTCTGAGGGAAGCATTTCATCTCCCAGTCCTTGCTACAGAGTCCACTGCATATTTTTCGTAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR CCA 90 bp | GTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGCATGGGCCAGGGAGGGGGCTCTGGGCCTTGGTaGAAGCCCATTCTGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VSGLRGPGSWAGCMGQGGGSGPW*KPILPH Trigger: GTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCC...CCCTCCCTGGCCCATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR TCA 90 bp | GGGAACCCCAGGTGCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCGCTGGGTGTCAGGTCTaGGGGGTCCAGGATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GNPRCWQPLFRELPCKPFAGCQV*GVQDPG Trigger: CCCAGGATCCTGGACCCCTCAGACCTGACACCCAGC...GAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGCACCTGGGGTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CAA 90 bp | AGGTGCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTaGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RCWQPLFRELPCKPF*LGVRSEGSRILGRV Trigger: CACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGCATGGGCCACATGGCTCTGGGCCTTaGTGGAAGCCCATTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LLGVRSEGSRILGRVHGPHGSGP*WKPILP Trigger: GGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATG...TGGCCCATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CAA 90 bp | TGGGAAGAGTGCGCCACTCGGTCGGGCACTCAGCTTCTGGTGACCTaGCTGCCATGCATGGCTCTGGGCCTTGGTGGAAGCCCATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: WEECATRSGTQLLVT*LPCMALGLGGSPFC Trigger: GCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCGAGTGGCGCACTCTTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACAGGGGCACTCAGCTTCTGGTaGCCTTGCTGCCATGCATGG | + |
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Preference number: 2 (lower is better) Translates to: HWAASWKEAHRPGASRTGALSFW*PCCHAW Trigger: CCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGC...CCCTGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGCAGCCACTGGTCACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCCCTTGCTGCCATGCATaGCTCTGGGCCTTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GRAATGHWAASWKEAHRPPCCHA*LWALVE Trigger: TTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGG...GGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGCCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAACCCCAGGTGCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCGCAGCCACTGGTCACTaGGCAGCATCATGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GNPRCWQPLFRELPCKPFAATGH*AASWKE Trigger: TTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGC...GAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGCACCTGGGGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACAGGGCATCCTGAATCTCAGTaGCCATCAGTCTCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HWAASWKEAHRPGASRTGHPESQ*PSVSVL Trigger: CAGCACTGAGACTGATGGTCACTGAGATTCAGGATG...CCCTGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR TCA 90 bp | CGGGCAGATCAAAACCTTACTGGGAGAGATGGCTCAGCATGCCAAGACACTCGTCACTGCCCAGGTTCGTaGCTGCATCCAGACCCACTG | + |
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Preference number: 2 (lower is better) Translates to: RADQNLTGRDGSACQDTRHCPGS*LHPDPL Trigger: CAGTGGGTCTGGATGCAGTCACGAACCTGGGCAGTG...ACGAGTGTCTTGGCATGCTGAGCCATCTCTCCCAGTAAGGTTTTGATCTGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR TCA 90 bp | GCATGTTCACTGGCTCTCTGTTGCACCCTTCCCATCCCTACCTCAGGGTCCCTGGAGCTAAGGAGGTTCTaGCAGTCACAGGCTGCTATG | + |
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Preference number: 2 (lower is better) Translates to: ACSLALCCTLPIPTSGSLELRRF*QSQAAM Trigger: CATAGCAGCCTGTGACTGTCAGAACCTCCTTAGCTC...CAGGGACCCTGAGGTAGGGATGGGAAGGGTGCAACAGAGAGCCAGTGAACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGATAAGGAACAAGGCAGGAATGTGGTTCCCCGGCCCTGTCTGCCATCCTCTAATTCTCACAGGCTaGCCTCTGAGTTCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SEIRNKAGMWFPGPVCHPLILTG*PLSSAC Trigger: GCAGGCAGAACTCAGAGGGCAGCCTGTGAGAATTAG...AGGATGGCAGACAGGGCCGGGGAACCACATTCCTGCCTTGTTCCTTATCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR CCA 90 bp | CGGGCAGATCAAAACCTTACTGGGAGAGATGGCTCAGCATGCCAAGACACTCGTACTCTGGCTCACACATaGGGTAGGGAGATGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RADQNLTGRDGSACQDTRTLAHT*GREMGV Trigger: TACACCCATCTCCCTACCCCATGTGTGAGCCAGAGT...ACGAGTGTCTTGGCATGCTGAGCCATCTCTCCCAGTAAGGTTTTGATCTGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGCCCATGTGGGAATTCTGCAAGGGTCATCAAAAAGCCACTGGGAGCAACCTTACTGGGAGAGATaGCTCAGCATGCCAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LPAHVGILQGSSKSHWEQPYWER*LSMPRH Trigger: GTGTCTTGGCATGCTGAGCCATCTCTCCCAGTAAGG...TTGCTCCCAGTGGCTTTTTGATGACCCTTGCAGAATTCCCACATGGGCAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR CCA 90 bp | TTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGAGGAGGCGGCAGATAGGGTaGCTGGGAAGAGTGCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FNESSQIQELGAGVTAWRRRQIG*LGRVRH Trigger: GTGGCGCACTCTTCCCAGCCACCCTATCTGCCGCCT...CCTCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR CCA 90 bp | TTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGAGGGGGAACCCCAGGTGCTaGCAGCCCCTATTTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FNESSQIQELGAGVTAWRGNPRC*QPLFRE Trigger: CTCCCGAAATAGGGGCTGCCAGCACCTGGGGTTCCC...CCTCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGAGATAAGGAACAAGGCAGGAATGTGGTTCCCCGGCCCTGTCTGCCATGCAGTGTCATCTTTGTaGATAGTCTGTAGCAACACT | + |
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Preference number: 2 (lower is better) Translates to: PSEIRNKAGMWFPGPVCHAVSSL*IVCSNT Trigger: AGTGTTGCTACAGACTATCCACAAAGATGACACTGC...ATGGCAGACAGGGCCGGGGAACCACATTCCTGCCTTGTTCCTTATCTCTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR-3UTR CCA 90 bp | CTAACAGTCTCTTCTGGATTCTTCAGGTACCTGCAATCACACGTGCACACACCAGATTGCAGAGGAAGATaGAAGACAGGCTGCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTVSSGFFRYLQSHVHTPDCRGR*KTGCLP Trigger: AGGCAGGCAGCCTGTCTTCCATCTTCCTCTGCAATC...TGGTGTGTGCACGTGTGATTGCAGGTACCTGAAGAATCCAGAAGAGACTGTTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | TTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGAGGCACTGGGCAGCATCATaGAAGGAAGCCCATAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: FNESSQIQELGAGVTAWRHWAAS*KEAHRP Trigger: GGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTG...CCTCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGAAGACAGGCTGCCTGCCTGCCCATGTGGGAATTCTGCAAGGGTCATCATCTGGAAAATGGCCTTaGAATGTCACTATACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RWKTGCLPAHVGILQGSSSGKWP*NVTIHR Trigger: TCTGTGTATAGTGACATTGCAAGGCCATTTTCCAGA...TGATGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | CGGGCAGATCAAAACCTTACTGGGAGAGATGGCTCAGCATGCCAAGACACTCGTGGATGCTCTGGAAAATaGCCTTGCAATGTCACTATA | + |
|
Preference number: 2 (lower is better) Translates to: RADQNLTGRDGSACQDTRGCSGK*PCNVTI Trigger: TATAGTGACATTGCAAGGCCATTTTCCAGAGCATCC...ACGAGTGTCTTGGCATGCTGAGCCATCTCTCCCAGTAAGGTTTTGATCTGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCTAGGTTTATTAAACGACAGGGATGCTCTGGAAAATGGCCTTGCAATGTCAAGGAGATTAGTGGGTaGGTGGTCTTGGTGGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GARFIKRQGCSGKWPCNVKEISG*VVLVER Trigger: TCTCTCCACCAAGACCACTCACCCACTAATCTCCTT...GACATTGCAAGGCCATTTTCCAGAGCATCCCTGTCGTTTAATAAACCTAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | CATGTGCCTCCACAGTGGTATCAAAGACAAATGGGAACATCAAGAAGACTGGACTGGAGAGAGAGAGAGTaGCTACTGGCAGTGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: HVPPQWYQRQMGTSRRLDWRERE*LLAVSS Trigger: AGATGACACTGCCAGTAGCCACTCTCTCTCTCTCCA...GTCCAGTCTTCTTGATGTTCCCATTTGTCTTTGATACCACTGTGGAGGCACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | GATGAGTCCACCAATATTCAACTTCTATCACTGGCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTGAGTaGTCTTGGTGGAGAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DESTNIQLLSLAKGGRTRRLVGE*SWWRER Trigger: TCTCTCTCTCCACCAAGACCACTCACCCACTAATCT...CCTTGTCCTTCCTCCCTTTGCCAGTGATAGAAGTTGAATATTGGTGGACTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAAGCCACTGGGAGCAATGGATGATGGATAAAAGTGCAGCACACAAGGCCAACGCTAAGGTTACATaGGAAACAGGCAAAGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SKSHWEQWMMDKSAAHKANAKVT*ETGKGK Trigger: CTTGCCTTTGCCTGTTTCCCATGTAACCTTAGCGTT...GGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAAGCCACTGGGAGCAATGGATGATGGATAAAAGTGCAGCACACAAGGCCCACACCATTGAGAAATaGAAGCACATGTCCACATAC | + |
|
Preference number: 2 (lower is better) Translates to: SKSHWEQWMMDKSAAHKAHTIEK*KHMSTY Trigger: GTATGTGGACATGTGCTTCCATTTCTCAATGGTGTG...GGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CCA 90 bp | GTAATTCCAGCTCTAGGGGATCTAACAGTCTCTTCTGGATTCTTCAGGTACCTGGAACATCAAGAAGACTaGACCAGCATCCTCCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: VIPALGDLTVSSGFFRYLEHQED*TSILHE Trigger: TTCATGGAGGATGCTGGTCCAGTCTTCTTGATGTTC...CAGGTACCTGAAGAATCCAGAAGAGACTGTTAGATCCCCTAGAGCTGGAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CAA 90 bp | AGAGGAAGAACAGAGCTCTCACCAGAAGTGAGAGTATCTGAGTATTaGAAGTCAGCACATTCCCCATATAAACAGACCGGATCCACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RGRTELSPEVRVSEY*KSAHSPYKQTGSTV Trigger: TACTGTGGATCCGGTCTGTTTATATGGGGAATGTGCTGACTTCAAATACTCAGATACTCTCACTTCTGGTGAGAGCTCTGTTCTTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGAACAATCTCAGCATCCTaGATCTCAGTGACCATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLMKVHRYKSLEQGSQLGTISAS*ISVTIS Trigger: ACTGATGGTCACTGAGATTCAGGATGCTGAGATTGT...TCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTCTCTCTGAGAACGCTAAGGTTACATGGGAAACAGGCAAAGGCAAGCAATTCAACTTCTATCACTaGCAAAGGGAGGAAGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: KCLSENAKVTWETGKGKQFNFYH*QREEGQ Trigger: TTGTCCTTCCTCCCTTTGCCAGTGATAGAAGTTGAA...TTGCTTGCCTTTGCCTGTTTCCCATGTAACCTTAGCGTTCTCAGAGAGACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | CCAGGGAGGGCAGCCACTGGTCACTGGGCAGCATCATaGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PGRAATGHWAAS*KEAHRPGASRT Trigger: TGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGCCCTCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR CCA 72 bp | AGGGTGCATGGGCCAGGGAGGGCAGCCACTGGTCACTaGGCAGCATCATGGAAGGAAGCCCATAGACCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVHGPGRAATGH*AASWKEAHRPG Trigger: ACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGCCCTCCCTGGCCCATGCACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACAGGGGCATGGCTCTGGGCCTaGGTGGAAGCCCATTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HWAASWKEAHRPGASRTGAWLWA*VEAHSA Trigger: GGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGC...CCCTGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR TCA 72 bp | AAGAGTGCGCCACTCGGTCGGGCACTCAGCTTCTGGTaGCCTTGCTGCCATGCATGGCTCTGGGCCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSAPLGRALSFW*PCCHAWLWALV Trigger: CACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCGAGTGGCGCACTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR GCA 72 bp | CGGTCGGGCACTCAGCTTCTGGTGACCTTGCTGCCATaGATGGCTCTGGGCCTTGGTGGAAGCCCATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSGTQLLVTLLP*MALGLGGSPFC Trigger: GCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR TCA 72 bp | TGGGGGTGGGAGTGGGCAGCAGAGCTAGTCCCGGGCTaGTGTGTGTTTGCTGCTCTTGCAGAGGACCGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WGWEWAAELVPG*CVFAALAEDRS Trigger: ACTTCGGTCCTCTGCAAGAGCAGCAAACACACATCAGCCCGGGACTAGCTCTGCTGCCCACTCCCACCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | AGGAACAAGGCAGGAATGTGGTTCCCCGGCCCTGTCTaGCATCCTTCAAGGACGGGTCTGGCCTGTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNKAGMWFPGPV*HPSRTGLACEA Trigger: TGCCTCACAGGCCAGACCCGTCCTTGAAGGATGGCAGACAGGGCCGGGGAACCACATTCCTGCCTTGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | AGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTTaGTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPYFGSSRVSPS*WVSGLRGPGSW Trigger: CCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR CCA 72 bp | CCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTTGCTaGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PYFGSSRVSPSC*VSGLRGPGSWA Trigger: TGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR CCA 72 bp | TCCCCGGCCCTGTCTGCCATCCTTCAAGGACGGGTCTaGCCTGTGAGGCATGAGAAACAAGAAAGGCGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SPALSAILQGRV*PVRHEKQERRQ Trigger: CTGTCGCCTTTCTTGTTTCTCATGCCTCACAGGCCAGACCCGTCCTTGAAGGATGGCAGACAGGGCCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | GGTGACCTTGCTGCCATGCATGGCTCTGGGCCTTGGTaGAAGCCCATTCTGCCCCACAATCTCAGCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GDLAAMHGSGPW*KPILPHNLSIL Trigger: CAGGATGCTGAGATTGTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR CCA 72 bp | TCTGGTGACCTTGCTGCCATGCATGGCTCTGGGCCTTaGTGGAAGCCCATTCTGCCCCACAATCTCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SGDLAAMHGSGP*WKPILPHNLSI Trigger: GATGCTGAGATTGTGGGGCAGAATGGGCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR TCA 72 bp | TCTGTTGCACCCTTCCCATCCCTACCTCAGGGTCCCTaGACCTTCTCTGGATCTCCCTTCAGAACTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVAPFPSLPQGP*TFSGSPFRTGV Trigger: CACCCCAGTTCTGAAGGGAGATCCAGAGAAGGTTCAGGGACCCTGAGGTAGGGATGGGAAGGGTGCAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | GGCAGCAGAGCTAGTCCCGGGCTGATGTGTGTTTGCTaGTCTTGCAGAGGACCGAAGTTTGGCTCACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSRASPGLMCVC*SCRGPKFGSQH Trigger: ATGCTGTGAGCCAAACTTCGGTCCTCTGCAAGAGCAGCAAACACACATCAGCCCGGGACTAGCTCTGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | TCACCAGCGGGCAGATCAAAACCTTACTGGGAGAGATaGCTCAGCATGCCAAGACACTCGTTGCCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPAGRSKPYWER*LSMPRHSLPGL Trigger: CAGGCCTGGCAACGAGTGTCTTGGCATGCTGAGCCATCTCTCCCAGTAAGGTTTTGATCTGCCCGCTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | CCCTGTCTGCCATCCTTCAAGGACGGGTCTGGCCTGTaGGGCATGAGAAACAAGAAAGGCGACAGATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLPSFKDGSGL*GMRNKKGDRLQ Trigger: CTGCAATCTGTCGCCTTTCTTGTTTCTCATGCCTCACAGGCCAGACCCGTCCTTGAAGGATGGCAGACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | GGAAGACAGGCTGCCTGCCTGCCCATGTGGGAATTCTaGAAGGGTCATCAAAAAGCCACTGGGAGCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRQAACLPMWEF*KGHQKATGSNG Trigger: TCCATTGCTCCCAGTGGCTTTTTGATGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | AAGGCGACAGATTGCAGAGGAAGATGGAAGACAGGCTaGCTGCCTGCCCATGTGGGAATTCTGCAAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KATDCRGRWKTG*LPAHVGILQGS Trigger: TGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCCATCTTCCTCTGCAATCTGTCGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | GAGGAAGATGGAAGACAGGCTGCCTGCCTGCCCATGTaGGAATTCTGCAAGGGTCATCAAAAAGCCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EEDGRQAACLPM*EFCKGHQKATG Trigger: CCCAGTGGCTTTTTGATGACCCTTGCAGAATTCCCACATGGGCAGGCAGGCAGCCTGTCTTCCATCTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | AACACTGCCCAGGTTCGTGACTGCATCCAGACCCACTaGCGGTGCACCTCACAGTGTGAACTGTGTCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NTAQVRDCIQTH*RCTSQCELCLK Trigger: CTTAAGACACAGTTCACACTGTGAGGTGCACCGTCAGTGGGTCTGGATGCAGTCACGAACCTGGGCAGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | GGAGGAAGGACAAGGAGATTAGTGGGTGAGTGGTCTTaGTGGAGAGAGAGAGAGTGGCTACTGGCAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGRTRRLVGEWS*WREREWLLAVS Trigger: TGACACTGCCAGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | GCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTGAGTaGTCTTGGTGGAGAGAGAGAGAGTGGCTACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AKGGRTRRLVGE*SWWREREWLLA Trigger: TGCCAGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCCCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTTCACTGGCTCTCTGTTGCACCCTTCCCATCCCTACCTCAGGGTCCCTGCTCTGGAAAATGGCCTaGCAATGTCACTATACACAG | + |
|
Preference number: 3 (lower is better) Translates to: ACSLALCCTLPIPTSGSLLWKMA*QCHYTQ Trigger: CTGTGTATAGTGACATTGCAAGGCCATTTTCCAGAG...CAGGGACCCTGAGGTAGGGATGGGAAGGGTGCAACAGAGAGCCAGTGAACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | ACTGGCAAAGGGAGGAAGGACAAGGAGATTAGTGGGTaGGTGGTCTTGGTGGAGAGAGAGAGAGTGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TGKGRKDKEISG*VVLVERERVAT Trigger: AGTAGCCACTCTCTCTCTCTCCACCAAGACCACTCACCCACTAATCTCCTTGTCCTTCCTCCCTTTGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | TGCCATCCTTCAAGGACGGGTCTGGCCTGTGAGGCATaGGAAACAAGAAAGGCGACAGATTGCAGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CHPSRTGLACEA*ETRKATDCRGR Trigger: TCTTCCTCTGCAATCTGTCGCCTTTCTTGTTTCTCATGCCTCACAGGCCAGACCCGTCCTTGAAGGATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | GGACTTCGTGTTCCCTGCCCAAACCCTGGGCTCATGTaGCTCCACAGTGGTATCAAAGACAAATGGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GLRVPCPNPGLM*LHSGIKDKWEH Trigger: ATGTTCCCATTTGTCTTTGATACCACTGTGGAGGCACATGAGCCCAGGGTTTGGGCAGGGAACACGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | AAAGTCACAGGGACTTCGTGTTCCCTGCCCAAACCCTaGGCTCATGTGCCTCCACAGTGGTATCAAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: KVTGTSCSLPKP*AHVPPQWYQRQ Trigger: TTGTCTTTGATACCACTGTGGAGGCACATGAGCCCAGGGTTTGGGCAGGGAACACGAAGTCCCTGTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | CTGCTCAGGAAGCTACACCTGGAGCTAAGGAGGTTCTaGCAGTCACAGGCTGCTATGGTACCTTATACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLRKLHLELRRF*QSQAAMVPYTD Trigger: GTCAGTATAAGGTACCATAGCAGCCTGTGACTGTCAGAACCTCCTTAGCTCCAGGTGTAGCTTCCTGAGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACAGGCAAAGGCAAGCAAATGGAGAGATGTGGACCCTGTGTGGTGCTAGGATGTGTGCAGTGGGATaGTATTTGGCTATAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GNRQRQANGEMWTLCGARMCAVG*YLAIRR Trigger: CCTTCTTATAGCCAAATACAATCCCACTGCACACAT...CCTAGCACCACACAGGGTCCACATCTCTCCATTTGCTTGCCTTTGCCTGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | ATTCTGCAAGGGTCATCAAAAAGCCACTGGGAGCAATaGATGATGGATAAAAGTGCAGCACACAAGGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: ILQGSSKSHWEQ*MMDKSAAHKAT Trigger: CGTGGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGATGACCCTTGCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAAAGCCACTGGGAGCAATGGATGATGGATAAAAGTGCAGCACACAAGGCCTCCCTGAGCACACCATaGAGAAATGGAAGCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSHWEQWMMDKSAAHKASLSTP*RNGSTC Trigger: ACATGTGCTTCCATTTCTCAATGGTGTGCTCAGGGA...GGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | TTGGCTATAAGAAGGGAGACATGCATGACTCTAGAGTaGAGGAGACCAGCCACAAAAGACCACATCCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LAIRRETCMTLE*RRPATKDHIPD Trigger: ATCTGGGATGTGGTCTTTTGTGGCTGGTCTCCTTCACTCTAGAGTCATGCATGTCTCCCTTCTTATAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | AAATATGCAGTGGACTCTGTAGCAAGGACTGGGAGATaGAATGCTTCCCTCAGAGATAAGGAACAAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KYAVDSVARTGR*NASLRDKEQGR Trigger: CCTGCCTTGTTCCTTATCTCTGAGGGAAGCATTTCATCTCCCAGTCCTTGCTACAGAGTCCACTGCATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | ATGGGAAACAGGCAAAGGCAAGCAAATGGAGAGATGTaGACCCTGTGTGGTGCTAGGTTTATTAAACGACAG | + |
|
Preference number: 3 (lower is better) Translates to: MGNRQRQANGEM*TLCGARFIKRQ Trigger: CTGTCGTTTAATAAACCTAGCACCACACAGGGTCCACATCTCTCCATTTGCTTGCCTTTGCCTGTTTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR TCA 72 bp | CACGTCAACAAAGATGGCAAACTCAATCTAAAGGACTaGAGCCACTGTCAGAATGGGCAGGTTCCAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HVNKDGKLNLKD*SHCQNGQVPKN Trigger: GTTCTTTGGAACCTGCCCATTCTGACAGTGGCTTCAGTCCTTTAGATTGAGTTTGCCATCTTTGTTGACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR GCA 72 bp | ATGAGTGTCCCTCCATGTTTACCTGTGGTATATGTGTaGAGTGGGATTGTATTTGGCTATAAGAAGGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MSVPPCLPVVYV*SGIVFGYKKGD Trigger: GTCTCCCTTCTTATAGCCAAATACAATCCCACTGCACACATATACCACAGGTAAACATGGAGGGACACTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CCA 72 bp | ATAAAAGTGCAGCACACAAGGCCACGTCAACAAAGATaGCAAACTCAATCTAAAGGACTGAAGCCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKVQHTRPRQQR*QTQSKGLKPLS Trigger: TGACAGTGGCTTCAGTCCTTTAGATTGAGTTTGCCATCTTTGTTGACGTGGCCTTGTGTGCTGCACTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR GCA 72 bp | TTTATTAAACGACAGGGATGCTCTGGAAAATGGCCTTaGAATGTCACTATACACAGACTTATCATAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FIKRQGCSGKWP*NVTIHRLIIGS Trigger: GGAGCCTATGATAAGTCTGTGTATAGTGACATTGCAAGGCCATTTTCCAGAGCATCCCTGTCGTTTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CCA 72 bp | TTTTTAAAATGTCTCTCTGAGAACGCTAAGGTTACATaGGAAACAGGCAAAGGCAAGCAAATGGAGAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: FLKCLSENAKVT*ETGKGKQMERC Trigger: ACATCTCTCCATTTGCTTGCCTTTGCCTGTTTCCCATGTAACCTTAGCGTTCTCAGAGAGACATTTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CAA 72 bp | TGCGCCACTCGGTCGGGCACTCAGCTTCTGGTGACCTaGCTGCCATGCATGGCTCTGGGCCTTGGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CATRSGTQLLVT*LPCMALGLGGS Trigger: GCTTCCACCAAGGCCCAGAGCCATGCATGGCAGCAAGGTCACCAGAAGCTGAGTGCCCGACCGAGTGGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS-3UTR GCA 90 bp | GGGCAGCCACTGGTCACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCGGTGAAGTGCTTGCAGGCTTaGGGGACACCCGATGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPLVTGQHHGRKPIDPVKCLQA*GTPDAR Trigger: TCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTT...CACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACCAGTGGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS-3UTR CCA 90 bp | TTGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGCATGGGCCAACAGCCGTGCTGTCTTaGCATCCTCCACAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVRSEGSRILGRVHGPTAVLS*HPPQLH Trigger: ATGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGT...TGGCCCATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| 3UTR CAA 72 bp | CAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCTaGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLFRELPCKPF*LGVRSEGSRIL Trigger: CAGGATCCTGGACCCCTCAGACCTGACACCCAGCAAGAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS-3UTR GCA 90 bp | GCATGTTCACTGGCTCTCTGTTGCACCCTTCCCATCCCTACCTCAGGGTCCCTGAAGTGCTTGCAGGCTTaGGGGACACCCGATGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACSLALCCTLPIPTSGSLKCLQA*GTPDAR Trigger: TCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTT...CAGGGACCCTGAGGTAGGGATGGGAAGGGTGCAACAGAGAGCCAGTGAACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| CDS-3UTR GCA 90 bp | TTGCTGGGTGTCAGGTCTGAGGGGTCCAGGATCCTGGGCAGGGTGCATGGGCCAGATGATGCAGGAGGCTaGCAGAGCAGAACTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVRSEGSRILGRVHGPDDAGG*QSRTGD Trigger: ATCACCAGTTCTGCTCTGGCAGCCTCCTGCATCATC...TGGCCCATGCACCCTGCCCAGGATCCTGGACCCCTCAGACCTGACACCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS-3UTR GCA 90 bp | GGGAACCCCAGGTGCTGGCAGCCCCTATTTCGGGAGCTCCCGTGTAAGCCCTTCGATGTTAAACAGCCGTaGTGTCTTGGCATCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNPRCWQPLFRELPCKPFDVKQP*CLGILH Trigger: GTGGAGGATGCCAAGACAGCACGGCTGTTTAACATC...GAAGGGCTTACACGGGAGCTCCCGAAATAGGGGCTGCCAGCACCTGGGGTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS-3UTR TCA 90 bp | GACATGCATGACTCTAGAGTGAAGGAGACCAGCCACAAAAGACCACATCCCAGACCGGGTAGACCTCGATaGCTGTGGTGGGGTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DMHDSRVKETSHKRPHPRPGRPR*LWWGSS Trigger: TGACGAACCCCACCACAGTCATCGAGGTCTACCCGG...TCTGGGATGTGGTCTTTTGTGGCTGGTCTCCTTCACTCTAGAGTCATGCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| 3UTR CAA 72 bp | GGTAGTCTGTTCTCTTGCATGTTCACTGGCTCTCTGTaGCACCCTTCCCATCCCTACCTCAGGGTCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLFSCMFTGSL*HPSHPYLRVPE Trigger: TTCAGGGACCCTGAGGTAGGGATGGGAAGGGTGCAACAGAGAGCCAGTGAACATGCAAGAGAACAGACTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS-3UTR TCA 90 bp | TTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGAGGCCGGGTAGACCTCGATaGCTGTGGTGGGGTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNESSQIQELGAGVTAWRPGRPR*LWWGSS Trigger: TGACGAACCCCACCACAGTCATCGAGGTCTACCCGG...CCTCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGCCACTGGGAGCAATGGATGATGGATAAAAGTGCAGCACACAAGGCCCTGGGATTGTATGTGTaGCCCACCACACAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKSHWEQWMMDKSAAHKALGLYV*PTTQAL Trigger: CAGGGCCTGTGTGGTGGGGCACACATACAATCCCAG...GGCCTTGTGTGCTGCACTTTTATCCATCATCCATTGCTCCCAGTGGCTTTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS-3UTR GCA 90 bp | GGTGCTAGGTTTATTAAACGACAGGGATGCTCTGGAAAATGGCCTTGCAATGTCGGTGTTGTCTCGCTGTaGCATCCAGGTTCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GARFIKRQGCSGKWPCNVGVVSL*HPGSFL Trigger: GAGGAAGGAACCTGGATGGCACAGCGAGACAACACC...GACATTGCAAGGCCATTTTCCAGAGCATCCCTGTCGTTTAATAAACCTAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS-3UTR CCA 90 bp | GACATGCATGACTCTAGAGTGAAGGAGACCAGCCACAAAAGACCACATCCCAGACTCTTACATAGCAGATaGCTCCATCACCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DMHDSRVKETSHKRPHPRLLHSR*LHHPPQ Trigger: CTGAGGAGGGTGATGGAGCCATCTGCTATGTAAGAG...TCTGGGATGTGGTCTTTTGTGGCTGGTCTCCTTCACTCTAGAGTCATGCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS-3UTR CCA 90 bp | AAATGTCTCTCTGAGAACGCTAAGGTTACATGGGAAACAGGCAAAGGCAAGCAACTGCCTCTCCAGGACTaGGATTGTATGTGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCLSENAKVTWETGKGKQLPLQD*DCMCAP Trigger: TGGGGCACACATACAATCCCAGTCCTGGAGAGGCAG...TTGCTTGCCTTTGCCTGTTTCCCATGTAACCTTAGCGTTCTCAGAGAGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| CDS-3UTR TCA 90 bp | CTAACAGTCTCTTCTGGATTCTTCAGGTACCTGCAATCACACGTGCACACACCATTAACAATGCTGAGCTaGGTTCTTCTCAAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTVSSGFFRYLQSHVHTPLTMLS*VLLKGV Trigger: AACACCTTTGAGAAGAACTCAGCTCAGCATTGTTAA...TGGTGTGTGCACGTGTGATTGCAGGTACCTGAAGAATCCAGAAGAGACTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS-3UTR CCA 90 bp | GTTTTAATGAAAGTTCACAGATACAAGAGCTTGGAGCAGGGGTCACAGCTTGGATCAGTAGTCAGTGAGTaGGTACCGCAGGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLMKVHRYKSLEQGSQLGSVVSE*VPQENE Trigger: TTCATTTTCCTGCGGTACCCACTCACTGACTACTGA...TCCAAGCTGTGACCCCTGCTCCAAGCTCTTGTATCTGTGAACTTTCATTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
||
| 3UTR CAA 72 bp | ACAGAGCTCTCACCAGAAGTGAGAGTATCTGAGTATTaGAAGTCAGCACATTCCCCATATAAACAGACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TELSPEVRVSEY*KSAHSPYKQTG Trigger: TCCGGTCTGTTTATATGGGGAATGTGCTGACTTCAAATACTCAGATACTCTCACTTCTGGTGAGAGCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CAA 72 bp | GTTTACCTGTGGTATATGTGTGCAGTGGGATTGTATTaGGCTATAAGAAGGGAGACATGCATGACTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYLWYMCAVGLY*AIRRETCMTLE Trigger: CTCTAGAGTCATGCATGTCTCCCTTCTTATAGCCAAATACAATCCCACTGCACACATATACCACAGGTAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| 3UTR CAA 72 bp | CTCCATGTTTACCTGTGGTATATGTGTGCAGTGGGATaGTATTTGGCTATAAGAAGGGAGACATGCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LHVYLWYMCAVG*YLAIRRETCMT Trigger: AGTCATGCATGTCTCCCTTCTTATAGCCAAATACAATCCCACTGCACACATATACCACAGGTAAACATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
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| CDS TCA 90 bp | CTGCAGGGCAGGAGGCTTGGACACACAGGCGAAGCAGCCCTTGGGTaGACCTGCTGGTGGCCTGGGAATCCAGAAGGCCCCGTCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQGRRLGHTGEAALG*TCWWPGNPEGPVQG Trigger: CCCTTGGACGGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
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| CDS CCA 90 bp | TGGACACACAGGCGAAGCAGCCCTTGGGTGAACCTGCTGGTGGCCTaGGAATCCAGAAGGCCCCGTCCAAGGGGACTCGGGCTTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WTHRRSSPWVNLLVA*ESRRPRPRGLGLPG Trigger: CCCAGGAAGCCCGAGTCCCCTTGGACGGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
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| CDS CCA 90 bp | CAGCCTGCAGGGCAGGAGGCTTGGACACACAGGCGAAGCAGCCCTTaGGTGAACCTGCTGGTGGCCTGGGAATCCAGAAGGCCCCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPAGQEAWTHRRSSP*VNLLVAWESRRPRP Trigger: TGGACGGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCCTGCAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
||
| CDS-3UTR CAA 90 bp | GGTCACTGGGCAGCATCATGGAAGGAAGCCCATAGACCCGGTGCCAGCAGGACAAACAGCCGTGCTGTCTaGGCATCCTCCACAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHWAASWKEAHRPGASRTNSRAV*ASSTAP Trigger: TGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGTT...TGTCCTGCTGGCACCGGGTCTATGGGCTTCCTTCCATGATGCTGCCCAGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084412.6 |
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| CDS GCA 90 bp | TCGATGACTGTGGTGGGGTTCGTCATCGTCTTCTTCTCAGCTAAGTaGTTGCAGGCTTGCGGGACACCCGATGCCCGAACGCTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMTVVGFVIVFFSAK*LQACGTPDARTLSV Trigger: GACTGACAGCGTTCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCACCACAGTCATCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS GCA 90 bp | GATGCAGGAGGCTGCCAGAGCAGAACTGGTGATGTTAAACAGCCGTaGTGTCTTGGCATCCTCCACAGCTCCATTCAGGTCATTCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DAGGCQSRTGDVKQP*CLGILHSSIQVIQE Trigger: CTCTTGAATGACCTGAATGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCCTCCTGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS GCA 90 bp | GAGTGGGTACCGCAGGAAAATGAAGATAAGGATGATGCAGGAGGCTaGCAGAGCAGAACTGGTGATGTTAAACAGCCGTGCTGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EWVPQENEDKDDAGG*QSRTGDVKQPCCLG Trigger: GCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCCTCCTGCATCATCCTTATCTTCATTTTCCTGCGGTACCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS GCA 72 bp | GAGGCCGAAGGCTCAGGAGCTGGAGCCGCTGCAGCCTaGAGGGCAGGAGGCTTGGACACACAGGCGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAEGSGAGAAAA*RAGGLDTQAKQ Trigger: CTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCCTGCAGGCTGCAGCGGCTCCAGCTCCTGAGCCTTCGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
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| CDS CAA 90 bp | GCAGCCTGCAGGGCAGGAGGCTTGGACACACAGGCGAAGCAGCCCTaGGGTGAACCTGCTGGTGGCCTGGGAATCCAGAAGGCCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AACRAGGLDTQAKQP*GEPAGGLGIQKAPS Trigger: GGACGGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCCTGCAGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
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| CDS TCA 72 bp | AGGAGGCTTGGACACACAGGCGAAGCAGCCCTTGGGTaGACCTGCTGGTGGCCTGGGAATCCAGAAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLGHTGEAALG*TCWWPGNPEGP Trigger: GGGGCCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
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| CDS CCA 72 bp | GGGCAGGAGGCTTGGACACACAGGCGAAGCAGCCCTTaGGTGAACCTGCTGGTGGCCTGGGAATCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQEAWTHRRSSP*VNLLVAWESRR Trigger: CCTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
||
| CDS CAA 72 bp | AGGGCAGGAGGCTTGGACACACAGGCGAAGCAGCCCTaGGGTGAACCTGCTGGTGGCCTGGGAATCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RAGGLDTQAKQP*GEPAGGLGIQK Trigger: CTTCTGGATTCCCAGGCCACCAGCAGGTTCACCCAAGGGCTGCTTCGCCTGTGTGTCCAAGCCTCCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105988.2 |
||
| CDS GCA 72 bp | GTGGTGGGGTTCGTCATCGTCTTCTTCTCAGCTAAGTaGTTGCAGGCTTGCGGGACACCCGATGCCCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: VVGFVIVFFSAK*LQACGTPDART Trigger: CGTTCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS CAA 72 bp | GTGGGGTTCGTCATCGTCTTCTTCTCAGCTAAGTGCTaGCAGGCTTGCGGGACACCCGATGCCCGAACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGFVIVFFSAKC*QACGTPDARTL Trigger: CAGCGTTCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS GCA 72 bp | TGGGGTTCGTCATCGTCTTCTTCTCAGCTAAGTGCTTaGAGGCTTGCGGGACACCCGATGCCCGAACGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WGSSSSSSQLSA*RLAGHPMPERC Trigger: ACAGCGTTCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
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| CDS CAA 90 bp | ATGACTGTGGTGGGGTTCGTCATCGTCTTCTTCTCAGCTAAGTGCTaGCAGGCTTGCGGGACACCCGATGCCCGAACGCTGTCAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MTVVGFVIVFFSAKC*QACGTPDARTLSVL Trigger: CAAGACTGACAGCGTTCGGGCATCGGGTGTCCCGCAAGCCTGCAAGCACTTAGCTGAGAAGAAGACGATGACGAACCCCACCACAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
||
| CDS CCA 72 bp | CCACCACACAGGCCCTGTGATCTCTTACATAGCAGATaGCTCCATCACCCTCCTCAGGGTGGGCACCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPHRPCDLLHSR*LHHPPQGGHLV Trigger: TACAAGGTGCCCACCCTGAGGAGGGTGATGGAGCCATCTGCTATGTAAGAGATCACAGGGCCTGTGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059223.15 |
||
| CDS GCA 72 bp | GGCTGCCAGAGCAGAACTGGTGATGTTAAACAGCCGTaGTGTCTTGGCATCCTCCACAGCTCCATTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCQSRTGDVKQP*CLGILHSSIQV Trigger: GACCTGAATGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084412.6 ENSMUST00000105988.2 |
||
| CDS CAA 72 bp | GCTTGCGGGACACCCGATGCCCGAACGCTGTCAGTCTaGCTGCTTTTAGACTCCATAGGAAACAGAGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ACGTPDARTLSV*LLLDSIGNRVG Trigger: ACCCACTCTGTTTCCTATGGAGTCTAAAAGCAGCAAGACTGACAGCGTTCGGGCATCGGGTGTCCCGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059223.15 ENSMUST00000084412.6 ENSMUST00000105988.2 |
||
| CDS CAA 90 bp | GAGGCTGCCAGAGCAGAACTGGTGATGTTAAACAGCCGTGCTGTCTaGGCATCCTCCACAGCTCCATTCAGGTCATTCAAGAGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EAARAELVMLNSRAV*ASSTAPFRSFKSFL Trigger: CAAGAAGCTCTTGAATGACCTGAATGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCTGGCAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084412.6 ENSMUST00000105988.2 |
||
| CDS CAA 72 bp | AGAGCAGAACTGGTGATGTTAAACAGCCGTGCTGTCTaGGCATCCTCCACAGCTCCATTCAGGTCATTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RAELVMLNSRAV*ASSTAPFRSFK Trigger: CTTGAATGACCTGAATGGAGCTGTGGAGGATGCCAAGACAGCACGGCTGTTTAACATCACCAGTTCTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084412.6 ENSMUST00000105988.2 |
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