Pregenerated sensors for IFIT1BL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079339Ensembl transcript IDs: ENSMUST00000112467.2, ENSMUST00000168254.3
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGTAAAGATATCTTGCATTTCTCTCCCTTTTAATGCTCACCATTaGTCATTTATTTTGCTGTCAGATGTTGTTGAAGTTTGGAAGATC | + |
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Preference number: 1 (lower is better) Translates to: TVKISCISLPFNAHH*SFILLSDVVEVWKI Trigger: GATCTTCCAAACTTCAACAACATCTGACAGCAAAATAAATGAGCAATGGTGAGCATTAAAAGGGAGAGAAATGCAAGATATCTTTACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| 3UTR-3UTR GCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGCATCATCTGTATCTTaGTTCATGGGGGTTTATATA | + |
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Preference number: 2 (lower is better) Translates to: SHTHRPSTINYGCRKASNASSVS*FMGVYI Trigger: TATATAAACCCCCATGAAGCAAGATACAGATGATGC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| 3UTR-3UTR CAA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTGGCATCATCTGTATCTaGCTTCATGGGGGTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPGIICI*LHGGLY Trigger: ATATAAACCCCCATGAAGCAAGATACAGATGATGCC...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| 3UTR-3UTR CAA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTTGCTGTCAGATGTTGTaGAAGTTTGGAAGATCCCAT | + |
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Preference number: 3 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPCCQML*KFGRSH Trigger: ATGGGATCTTCCAAACTTCAACAACATCTGACAGCA...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| 3UTR TCA 72 bp | ACAAAAAGATGCTTTGATTATTGGCTTGGGGGTCATTaGCCAGCAGGTTCTGGCTGCAGTAAAGCCTATGAA | + |
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Preference number: 3 (lower is better) Translates to: TKRCFDYWLGGH*PAGSGCSKAYE Trigger: TTCATAGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAAAGCATCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| 3UTR TCA 72 bp | CAGATGTTGTTGAAGTTTGGAAGATCCCATGAAAAATaGGCCTTAATGTGTCAAGTGTCCTTTGATCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: QMLLKFGRSHEK*ALMCQVSFDRG Trigger: ACCCCGATCAAAGGACACTTGACACATTAAGGCTCATTTTTCATGGGATCTTCCAAACTTCAACAACATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGGGTTCACTGCTCCTGTaGGCCTCAGGGCCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRGSLLL*ASGPSH Trigger: ATGAGAGGGCCCTGAGGCTCACAGGAGCAGTGAACC...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTTCACCAGCCTTCTCTTaGTCAACTGCTCGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPSPAFS*STARSG Trigger: TCCAGAGCGAGCAGTTGAGCAAGAGAAGGCTGGTGA...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTCACTTTCAGAGCCTTTaGAAAGCAGGCCATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPHFQSL*KAGHGS Trigger: GGAGCCATGGCCTGCTTTGCAAAGGCTCTGAAAGTG...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGGGCCCTCTCATAGCATaGCATGGCTTCACTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRGPLIA*HGFTCV Trigger: AACACAAGTGAAGCCATGTCATGCTATGAGAGGGCC...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGGTTCACTGCTCCTGTaGGCCTCAGGGCCCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNGSLLL*ASGPSH Trigger: ATGAGAGGGCCCTGAGGCTCACAGGAGCAGTGAACC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTGTTTCTGCAAGGCTCTaGCAAGGAACTCAAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPVSARL*QGTQEL Trigger: AAGCTCTTGAGTTCCTTGGCAGAGCCTTGCAGAAAC...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGGTACTCAGGGTTTTCTaGCTCCACTTTCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRVLRVF*LHFQSL Trigger: AAGGCTCTGAAAGTGGAGCCAGAAAACCCTGAGTAC...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTCCAGGCTGTCATAGATaGGACAACTATGAGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPPGCHR*DNYEIL Trigger: CAAAATCTCATAGTTGTCTCATCTATGACAGCCTGG...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGGGAAATGCAAGAAGGTaGAGCAAGGTTGTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRGNARR*SKVVSA Trigger: TGCAGAAACAACCTTGCTCCACCTTCTTGCATTTCC...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTAGCCAGAGTAACATATaGCATCACATATGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPSQSNI*HHICGF Trigger: AAACCCACATATGTGATGGCATATGTTACTCTGGCT...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTGCCAAATGGATGGATTaGTCTGCTCTTTTTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPAKWMD*SALFLS Trigger: AGATAGAAAAAGAGCAGACCAATCCATCCATTTGGC...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGACAACTATGAGATTTTaGACTCATGTTGCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRTTMRF*THVAGT Trigger: AGTCCCAGCAACATGAGTGCAAAATCTCATAGTTGT...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112467.2 |
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| CDS-3UTR GCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGCGATAGGCTACGACTaGATAGCCAGCATTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNAIGYD*IASIVL Trigger: GAGTACAATGCTGGCTATGCAGTCGTAGCCTATCGC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGAACTTCCATGTGAAATaGCATCTCAGCTCAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRNFHVK*HLSSTR Trigger: CCTGGTTGAGCTGAGATGCCATTTCACATGGAAGTT...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTTTGCAAAGCAGGCCATaGCTCCTTTATAATTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPLQSRP*LLYNFV Trigger: TACAAAATTATAAAGGAGCCATGGCCTGCTTTGCAA...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGGGGGCTGCGAGGATATCCTaGGCAGAGTTTCTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: AVEKQAIEKASSVSCFMGAARIS*AEFLQC Trigger: ACATTGAAGAAACTCTGCCCAGGATATCCTCGCAGC...CCCCATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGCCAGGCTGTCATAGATaGGACAACTATGAGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRPGCHR*DNYEIL Trigger: CAAAATCTCATAGTTGTCTCATCTATGACAGCCTGG...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGGTATTGGAAGGGACTTaGAAATTCCTTGCACACCTT | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRVLEGT*KFLAHL Trigger: AAGGTGTGCAAGGAATTTTCAAGTCCCTTCCAATAC...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGCTTTATAATTTTGTATaGCACACTTCAACAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KCPACVTGEWTLLSHTHRLYNFV*HTSTRP Trigger: GGGCCTTGTTGAAGTGTGGCATACAAAATTATAAAG...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGGCCAATCTGGAAATaGAAGAAGGTGGAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNRPIWK*KKVEQG Trigger: ACCTTGCTCCACCTTCTTGCATTTCCAGATTGGCCT...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATTTGCACTCATGTTGCTaGGACTCAGAAGTTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNLHSCC*DSEVAP Trigger: TGGAGCAACTTCTGAGTCCCAGCAACATGAGTGCAA...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112467.2 |
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| CDS-3UTR CCA 90 bp | GCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGGGGCACTCCAGCCTGTATTaGAAGGGACTTGAAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: AVEKQAIEKASSVSCFMGHSSLY*KGLENS Trigger: GGAATTTTCAAGTCCCTTCCAATACAGGCTGGAGTG...CCCCATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGTACTCAGGGTTTTCTaGCTCCACTTTCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNVLRVF*LHFQSL Trigger: AAGGCTCTGAAAGTGGAGCCAGAAAACCCTGAGTAC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGAAGGTATGGATCTTCTaGTTTTACGCTGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRKVWIF*FYADSL Trigger: AAGGCTGTCAGCGTAAAACCAGAAGATCCATACCTT...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCGTTTCTGCAAGGCTCTaGCAAGGAACTCAAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIIVSARL*QGTQEL Trigger: AAGCTCTTGAGTTCCTTGGCAGAGCCTTGCAGAAAC...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGAGCAAGGTTGTTTCTaGAAGGCTCTGCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YGCRKASNRKGIICILLHEQGCF*KALPRN Trigger: GTTCCTTGGCAGAGCCTTGCAGAAACAACCTTGCTC...ATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCAGGCCAATCTGGAAATaGAAGAAGGTGGAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIIRPIWK*KKVEQG Trigger: ACCTTGCTCCACCTTCTTGCATTTCCAGATTGGCCT...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATCACTCCAGCCTGTATTaGAAGGGACTTGAAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNHSSLY*KGLENS Trigger: GGAATTTTCAAGTCCCTTCCAATACAGGCTGGAGTG...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGATCAGTCGTTTCTTATaGCAAAGGCCAATCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRISRFL*QRPIWK Trigger: TTTCCAGATTGGCCTTTGCCATAAGAAACGACTGAT...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATTTGCACTCACGTTGCTaGGACTCAGAAGTTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YGCRKASNRKGIICILLHLHSRC*DSEVAP Trigger: TGGAGCAACTTCTGAGTCCCAGCAACGTGAGTGCAA...ATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGTATTGGAAGGGACTTaGAAATTCCTTGCACACCTT | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNVLEGT*KFLAHL Trigger: AAGGTGTGCAAGGAATTTTCAAGTCCCTTCCAATAC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGGAGAACTTTAAGGTATaGATCTTCTGGTTTTACGCT | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRENFKV*IFWFYA Trigger: AGCGTAAAACCAGAAGATCCATACCTTAAAGTTCTC...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGCTGCGAGGATATCCTaGGCAGAGTTTCTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: YGCRKASNRKGIICILLHAARIS*AEFLQC Trigger: ACATTGAAGAAACTCTGCCCAGGATATCCTCGCAGC...ATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGGGGATCAGTCGTTTCTTATaGCAAAGGCCAATCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AVEKQAIEKASSVSCFMGISRFL*QRPIWK Trigger: TTTCCAGATTGGCCTTTGCCATAAGAAACGACTGAT...CCCCATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATTCTTCCCCTCTTGGTTaGATGTTTGAAGCTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNSSPLG*MFEAFF Trigger: AAAGAAAGCTTCAAACATGCAACCAAGAGGGGAAGA...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGCCAGAGTAACATATaGCATCACATATGTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SHTHRPSTINYGCRKASNSQSNI*HHICGF Trigger: AAACCCACATATGTGATGGCATATGTTACTCTGGCT...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCACAACTATGAGATTTTaGACTCACGTTGCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIITTMRF*THVAGT Trigger: AGTCCCAGCAACGTGAGTGCAAAATCTCATAGTTGT...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGTCCTTCGGTAAAATTTaGCTACATATCCAAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRSFGKI*LHIQRH Trigger: ATGTCTTTGGATATGTAGCCAAATTTTACCGAAGGA...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGGAAATGCAAGAAGGTaGAGCAAGGTTGTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YGCRKASNRKGIICILLHGNARR*SKVVSA Trigger: TGCAGAAACAACCTTGCTCCACCTTCTTGCATTTCC...ATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR TCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCGATGGCTGCCTCTTCTaGTTTCTTATAGTATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIIDGCLF*FLIVLL Trigger: CAACAATACTATAAGAAATCAGAAGAGGCAGCCATC...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | TATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATAAGGTATGGATCTTCTaGTTTTACGCTGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YGCRKASNRKGIICILLHKVWIF*FYADSL Trigger: AAGGCTGTCAGCGTAAAACCAGAAGATCCATACCTT...ATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCGCCAAATGGATGGATTaGTCTGCTCTTTTTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIIAKWMD*SALFLS Trigger: AGATAGAAAAAGAGCAGACCAATCCATCCATTTGGC...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR GCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCCTTTATAATTTTGTATaGCACACTTCAACAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIILYNFV*HTSTRP Trigger: GGGCCTTGTTGAAGTGTGGCATACAAAATTATAAAG...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCGAGAACTTTAAGGTATaGATCTTCTGGTTTTACGCT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIIENFKV*IFWFYA Trigger: AGCGTAAAACCAGAAGATCCATACCTTAAAGTTCTC...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CCA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTCCTTCGGTAAAATTTaGCTACATATCCAAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: PSTINYGCRKASNRKGIISFGKI*LHIQRH Trigger: ATGTCTTTGGATATGTAGCCAAATTTTACCGAAGGA...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | TTGATTATTGGCTTGGGGGTCATTGACCAGCAGGTTCTGGCTGCAGTAAAGCCTGTCACCAGCCTTCTCTaGCTCAACTGCTCGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LIIGLGVIDQQVLAAVKPVTSLL*LNCSLW Trigger: CCAGAGCGAGCAGTTGAGCAAGAGAAGGCTGGTGAC...AGGCTTTACTGCAGCCAGAACCTGCTGGTCAATGACCCCCAAGCCAATAATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGGTCACCAGCCTTCTCTaGCTCAACTGCTCGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRVTSLL*LNCSLW Trigger: CCAGAGCGAGCAGTTGAGCAAGAGAAGGCTGGTGAC...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGGAAGGTGGAGCAAGGTaGTTTCTGCAAGGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GDAIKGTLIRKMSSMCDREGGAR*FLQGSA Trigger: GGCAGAGCCTTGCAGAAACAACCTTGCTCCACCTTC...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGAAGGTGGAGCAAGGTaGTTTCTGCAAGGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SHTHRPSTINYGCRKASNEGGAR*FLQGSA Trigger: GGCAGAGCCTTGCAGAAACAACCTTGCTCCACCTTC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGGATTTTGCACTCACGTaGCTGGGACTCAGAAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRDFALT*LGLRSC Trigger: GCAACTTCTGAGTCCCAGCAACGTGAGTGCAAAATC...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGTTCTATCTTCCCCTCTaGGTTGCATGTTTGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: KCPACVTGEWTLLSHTHRFYLPL*VACLKL Trigger: AAGCTTCAAACATGCAACCAAGAGGGGAAGATAGAA...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | AAATGTCCAGCATGTGTGACAGGAGAATGGACACTCCTGTCACACACTCATAGGCCGGAAGTGAATCTCTaGCTGAATATGATCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KCPACVTGEWTLLSHTHRPEVNL*LNMIFQ Trigger: TTGGAAGATCATATTCAGCAAGAGATTCACTTCCGG...CCTATGAGTGTGTGACAGGAGTGTCCATTCTCCTGTCACACATGCTGGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | GGAGATGCAATTAAAGGCACACTCATAAGGAAAATGTCCAGCATGTGTGACAGGCCGGAAGTGAATCTCTaGCTGAATATGATCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GDAIKGTLIRKMSSMCDRPEVNL*LNMIFQ Trigger: TTGGAAGATCATATTCAGCAAGAGATTCACTTCCGG...CCTGTCACACATGCTGGACATTTTCCTTATGAGTGTGCCTTTAATTGCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | CCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCGATTTTGCACTCATGTaGCTGGGACTCAGAAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PSTINYGCRKASNRKGIIDFALM*LGLRSC Trigger: GCAACTTCTGAGTCCCAGCAACATGAGTGCAAAATC...GATGATGCCTTTTCTATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112467.2 |
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| CDS-3UTR CAA 90 bp | GCTGTAGAAAAGCAAGCAATAGAAAAGGCATCATCTGTATCTTGCTTCATGGGGTGTATTGGAAGGGACTaGAAAATTCCTTGCACACCT | + |
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Preference number: 5 (lower is better) Translates to: AVEKQAIEKASSVSCFMGCIGRD*KIPCTP Trigger: AGGTGTGCAAGGAATTTTCAAGTCCCTTCCAATACA...CCCCATGAAGCAAGATACAGATGATGCCTTTTCTATTGCTTGCTTTTCTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATTTCTATCTTCCCCTCTaGGTTGCATGTTTGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SHTHRPSTINYGCRKASNFYLPL*VACLKL Trigger: AAGCTTCAAACATGCAACCAAGAGGGGAAGATAGAA...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS-3UTR CAA 90 bp | TCACACACTCATAGGCCCTCAACCATAAATTATGGCTGTAGAAAAGCAAGCAATGGCTCCTTTATAATTTaGTATGCCACACTTCAACAA | + |
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Preference number: 5 (lower is better) Translates to: SHTHRPSTINYGCRKASNGSFII*YATLQQ Trigger: TTGTTGAAGTGTGGCATACAAAATTATAAAGGAGCC...ATTGCTTGCTTTTCTACAGCCATAATTTATGGTTGAGGGCCTATGAGTGTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS TCA 90 bp | TATGCCATCACATATGTGGGTTTCAGTTCTAAAGTCCGTTTAAAATaGCATATAGCCAAATGGATGGATTGGTCTGCTCTTTTTCTATCT | + |
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Preference number: 5 (lower is better) Translates to: YAITYVGFSSKVRLK*HIAKWMDWSALFLS Trigger: AGATAGAAAAAGAGCAGACCAATCCATCCATTTGGCTATATGTCATTTTAAACGGACTTTAGAACTGAAACCCACATATGTGATGGCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS TCA 90 bp | TGTAGTGAGAAGTTACCTCTATTTTTAGGCCTTTTAAGTAATGTGTaGTGGCTGCCTCTTCTGATTTCTTATAGTATTGTTGGAAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CSEKLPLFLGLLSNV*WLPLLISYSIVGSC Trigger: GCAACTTCCAACAATACTATAAGAAATCAGAAGAGGCAGCCATCACACATTACTTAAAAGGCCTAAAAATAGAGGTAACTTCTCACTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS CCA 72 bp | CGTAGGCCAGGAGGTTGTGCATCCCGATGCTGTAGCTaGCATCAAAGAACTCAGTCTCTGAGATTCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: RRPGGCASRCCS*HQRTQSLRFLL Trigger: AAGTAAGAATCTCAGAGACTGAGTTCTTTGATGCCAGCTACAGCATCGGGATGCACAACCTCCTGGCCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS CCA 72 bp | TCTTATGGCAAAGGCCAATCTGGAAATGCAAGAAGGTaGAGCAAGGTTGTTTCTGCAAGGCTCTGCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SYGKGQSGNARR*SKVVSARLCQG Trigger: TCCTTGGCAGAGCCTTGCAGAAACAACCTTGCTCCACCTTCTTGCATTTCCAGATTGGCCTTTGCCATAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS CAA 72 bp | GCCTCAGGGCCCTCTCATAGCATGACATGGCTTCACTaGTGTTCCCTTTCAGTTTGTAGACAAACCCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: ASGPSHSMTWLH*CSLSVCRQTQV Trigger: TACTTGGGTTTGTCTACAAACTGAAAGGGAACACAAGTGAAGCCATGTCATGCTATGAGAGGGCCCTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS GCA 72 bp | ATCTGGAAATGCAAGAAGGTGGAGCAAGGTTGTTTCTaGAAGGCTCTGCCAAGGAACTCAAGAGCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: IWKCKKVEQGCF*KALPRNSRASF Trigger: GAAAGAAGCTCTTGAGTTCCTTGGCAGAGCCTTGCAGAAACAACCTTGCTCCACCTTCTTGCATTTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS GCA 72 bp | AACCAGGCTGTCATAGATGAGACAACTATGAGATTTTaGACTCACGTTGCTGGGACTCAGAAGTTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: NQAVIDETTMRF*THVAGTQKLLH Trigger: ATGGAGCAACTTCTGAGTCCCAGCAACGTGAGTGCAAAATCTCATAGTTGTCTCATCTATGACAGCCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168254.3 |
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| CDS GCA 72 bp | AACCAGGCTGTCATAGATGAGACAACTATGAGATTTTaGACTCATGTTGCTGGGACTCAGAAGTTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: NQAVIDETTMRF*THVAGTQKLLH Trigger: ATGGAGCAACTTCTGAGTCCCAGCAACATGAGTGCAAAATCTCATAGTTGTCTCATCTATGACAGCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112467.2 |
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| CDS TCA 72 bp | TCCCCTCTTGGTTGCATGTTTGAAGCTTTCTTTATTTaGATCAGTCGTTTCTTATGGCAAAGGCCAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPLGCMFEAFFI*ISRFLWQRPIW Trigger: CCAGATTGGCCTTTGCCATAAGAAACGACTGATTCAAATAAAGAAAGCTTCAAACATGCAACCAAGAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS GCA 72 bp | CTGCCTCTTCTGATTTCTTATAGTATTGTTGGAAGTTaGCATACCGGAAGTGAATCTCTTGCTGAATATGAT | + |
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Preference number: 6 (lower is better) Translates to: LPLLISYSIVGS*HTGSESLAEYD Trigger: ATCATATTCAGCAAGAGATTCACTTCCGGTATGGCAACTTCCAACAATACTATAAGAAATCAGAAGAGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS CAA 72 bp | GTATTGTTGGAAGTTGCCATACCGGAAGTGAATCTCTaGCTGAATATGATCTTCCAAGTTACTCATGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VLLEVAIPEVNL*LNMIFQVTHVQ Trigger: TTGAACATGAGTAACTTGGAAGATCATATTCAGCAAGAGATTCACTTCCGGTATGGCAACTTCCAACAATAC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS TCA 72 bp | ACATATGTGGGTTTCAGTTCTAAAGTCCGTTTAAAATaGCATATAGCCAAATGGATGGATTGGTCTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: TYVGFSSKVRLK*HIAKWMDWSAL Trigger: AAGAGCAGACCAATCCATCCATTTGGCTATATGTCATTTTAAACGGACTTTAGAACTGAAACCCACATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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| CDS CAA 72 bp | CTGCTCTTTTTCTATCTTCCCCTCTTGGTTGCATGTTaGAAGCTTTCTTTATTTGAATCAGTCGTTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LLFFYLPLLVAC*KLSLFESVVSY Trigger: ATAAGAAACGACTGATTCAAATAAAGAAAGCTTCAAACATGCAACCAAGAGGGGAAGATAGAAAAAGAGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112467.2 ENSMUST00000168254.3 |
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