Pregenerated sensors for IFIH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026896Ensembl transcript IDs: ENSMUST00000028259.12, ENSMUST00000112459.4
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAATCATCTATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTaGCCTCCAGAGGCACCAGAAATGCATATGGTGCCCATACATACA | + |
|
Preference number: 1 (lower is better) Translates to: TIIYNSNFRGSGAFL*PPEAPEMHMVPIHT Trigger: TGTATGTATGGGCACCATATGCATTTCTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTATAGATGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 90 bp | GTAGTTCAATCAACATTTCACCATAAGGAGGCTGCGGAAGAAGGGTaGACTGAGGAGATGAACTTGACTGTGGAAATCAGTGACCGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: VVQSTFHHKEAAEEG*TEEMNLTVEISDRE Trigger: CTCTCGGTCACTGATTTCCACAGTCAAGTTCATCTCCTCAGTTCACCCTTCTTCCGCAGCCTCCTTATGGTGAAATGTTGATTGAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CCA 90 bp | AAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTaGAAATGTAGCAAGAAAACAGAAATCCTAGCCAGACAGCTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: KPQAKAFLGCESNSW*KCSKKTEILARQLQ Trigger: TTGCAGCTGTCTGGCTAGGATTTCTGTTTTCTTGCTACATTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTaGTGGAAATGTAGCAAGAAAACAGAAATCCTAGCCAGACAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: KKPQAKAFLGCESNS*WKCSKKTEILARQL Trigger: CAGCTGTCTGGCTAGGATTTCTGTTTTCTTGCTACATTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 90 bp | AAAATGACCTCCAAGATTCCTTCCCAAATCATGTCAGTTCATGCGTaGTATCCTGAATTATCTATATCCCCTTGCTTTGAGTGTGGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: KMTSKIPSQIMSVHA*YPELSISPCFECGH Trigger: ATGCCCACACTCAAAGCAAGGGGATATAGATAATTCAGGATATCACGCATGAACTGACATGATTTGGGAAGGAATCTTGGAGGTCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 90 bp | AGATCTTCCTTAATTAATTTAGGACAATACCTCATGGGCATTCCCTaGGCCCAGGTGATTTTAGAACTCATCAAATTGACAATTTTGATT | + |
|
Preference number: 1 (lower is better) Translates to: RSSLINLGQYLMGIP*AQVILELIKLTILI Trigger: AATCAAAATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAATTAATTAAGGAAGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR-3UTR CCA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCACAACTTCAGGGGATCTaGTGCCTTTCTCTGACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPQLQGI*CLSLTS Trigger: GGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTG...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CAA 90 bp | AGCAAGAAAACAGAAATCCTAGCCAGACAGCTGCAAGGAAACGGATaGTCAGTGAGCACCGTTTCCTCCTTCAAGGCCTTTGGATCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKKTEILARQLQGNG*SVSTVSSFKAFGSE Trigger: TTCTGATCCAAAGGCCTTGAAGGAGGAAACGGTGCTCACTGACAATCCGTTTCCTTGCAGCTGTCTGGCTAGGATTTCTGTTTTCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCCTCATGGGCATTCCCTaGGCCCAGGTGATTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CHIALHNEVQSYESKCGLLMGIP*AQVILE Trigger: TTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAG...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGGCTGCGGAAGAAGGGTaGACTGAGGAGATGAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: SYIRFLSSFESFYCSPLKAAEEG*TEEMNL Trigger: CAAGTTCATCTCCTCAGTTCACCCTTCTTCCGCAGC...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR TCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGCTCATGGGCATTCCCTaGGCCCAGGTGATTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVLMGIP*AQVILE Trigger: TTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAG...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGGGAAGAAGGGTGAACTaGGGAGATGAACTTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: SYIRFLSSFESFYCSPLKGRRVN*GDELDC Trigger: ACAGTCAAGTTCATCTCCTCAGTTCACCCTTCTTCC...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCGTTCTGTTACATCACTaGAAGCCAAACAAAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: CHIALHNEVQSYESKCGLVLLHH*KPNKSI Trigger: GATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAAC...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGCTTGCCACATTGCATTaGACAATGAAGTGCAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SYIRFLSSFESFYCSPLKLATLH*TMKCKV Trigger: AACTTTGCACTTCATTGTGCAATGCAATGTGGCAAG...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CAA 90 bp | AACACCCTGACCATAACAACTTTGGAAGAAATGATTTATTGTAGCTaGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NTLTITTLEEMIYCS*QFEVLIHDCVVVTV Trigger: CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTCTTCCAAAGTTGTTATGGTCAGGGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR CCA 90 bp | GAAACTGATTTCAGCCTTGTAAGAAAACGACATCTAGATGTTTGGCATACAAAACACCAGAAATGCATATaGTGCCCATACATACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: ETDFSLVRKRHLDVWHTKHQKCI*CPYIHA Trigger: CGCATGTATGTATGGGCACCATATGCATTTCTGGTG...TTTTGTATGCCAAACATCTAGATGTCGTTTTCTTACAAGGCTGAAATCAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR TCA 90 bp | GAAACTGATTTCAGCCTTGTAAGAAAACGACATCTAGATGTTTGGCATACAAAAGTTCTGTTACATCACTaGAAGCCAAACAAAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: ETDFSLVRKRHLDVWHTKVLLHH*KPNKSI Trigger: GATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAAC...TTTTGTATGCCAAACATCTAGATGTCGTTTTCTTACAAGGCTGAAATCAGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTACATTGCACAATGAAGTaGAAAGTTATGAGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVHCTMK*KVMRAN Trigger: ATTTGCTCTCATAACTTTGCACTTCATTGTGCAATG...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR TCA 72 bp | GTTGAGTACTTGTTGCTCATGCAGAGGACCCATGTTTaGTTCCCGGCCCCCACGTGGTGGCTCACAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: VEYLLLMQRTHV*FPAPTWWLTII Trigger: GATGATTGTGAGCCACCACGTGGGGGCCGGGAATCAAACATGGGTCCTCTGCATGAGCAACAAGTACTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR GCA 72 bp | CTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGAAATaGATATGGTGCCCATACATACATGCGGGCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVPFSDLQRHQK*IWCPYIHAGQA Trigger: TGCTTGGCCCGCATGTATGTATGGGCACCATATGCATTTCTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCAACTGAGGAGATGAACTaGACTGTGGAAATCAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPTEEMN*TVEISD Trigger: GTCACTGATTTCCACAGTCAAGTTCATCTCCTCAGT...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR GCA 72 bp | TTCTCTGACCTCCAGAGGCACCAGAAATGCATATGGTaGCCATACATACATGCGGGCCAAGCAGACATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSDLQRHQKCIW*PYIHAGQADID Trigger: GTCTATGTCTGCTTGGCCCGCATGTATGTATGGGCACCATATGCATTTCTGGTGCCTCTGGAGGTCAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 72 bp | TCAACATTTCACCATAAGGAGGCTGCGGAAGAAGGGTaGACTGAGGAGATGAACTTGACTGTGGAAATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: STFHHKEAAEEG*TEEMNLTVEIS Trigger: ACTGATTTCCACAGTCAAGTTCATCTCCTCAGTTCACCCTTCTTCCGCAGCCTCCTTATGGTGAAATGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGTTAGTGGTTGAGTACTaGTTGCTCATGCAGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SYIRFLSSFESFYCSPLKLVVEY*LLMQRT Trigger: GGTCCTCTGCATGAGCAACAAGTACTCAACCACTAA...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR GCA 72 bp | GAGGCACCAGAAATGCATATGGTGCCCATACATACATaGGGGCCAAGCAGACATAGACATAAAATAAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: EAPEMHMVPIHT*GPSRHRHKINR Trigger: TCTATTTATTTTATGTCTATGTCTGCTTGGCCCGCATGTATGTATGGGCACCATATGCATTTCTGGTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CCA 72 bp | GCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTaGAAATGTAGCAAGAAAACAGAAATCCTAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AKAFLGCESNSW*KCSKKTEILAR Trigger: TCTGGCTAGGATTTCTGTTTTCTTGCTACATTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 72 bp | TCCAAGATTCCTTCCCAAATCATGTCAGTTCATGCGTaGTATCCTGAATTATCTATATCCCCTTGCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKIPSQIMSVHA*YPELSISPCFE Trigger: CTCAAAGCAAGGGGATATAGATAATTCAGGATATCACGCATGAACTGACATGATTTGGGAAGGAATCTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR GCA 72 bp | TACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTaGTCGCCCTTGAAGAAACACATGATATGTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YIRFLSSFESFY*SPLKKHMICTV Trigger: CACAGTACATATCATGTGTTTCTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR TCA 72 bp | TTAATTAATTTAGGACAATACCTCATGGGCATTCCCTaGGCCCAGGTGATTTTAGAACTCATCAAATTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LINLGQYLMGIP*AQVILELIKLT Trigger: TGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAATTAATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR GCA 72 bp | ATCCAGAGTAAGTTTCAAGTCTGCTTATCGATAAGATaGCTCATCCAAAGCATAATGTATTGTGCTCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: IQSKFQVCLSIR*LIQSIMYCAPN Trigger: ATTAGGAGCACAATACATTATGCTTTGGATGAGGCATCTTATCGATAAGCAGACTTGAAACTTACTCTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR GCA 72 bp | TCTTACCAGTTAACAATCCAGAGTAAGTTTCAAGTCTaGTTATCGATAAGATGCCTCATCCAAAGCATAATG | + |
|
Preference number: 3 (lower is better) Translates to: SYQLTIQSKFQV*LSIRCLIQSIM Trigger: CATTATGCTTTGGATGAGGCATCTTATCGATAAGCAGACTTGAAACTTACTCTGGATTGTTAACTGGTAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCATGGAGACACTCGTCATaGGCAGTCTCAGAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPWRHSS*AVSEEG Trigger: TCCTTCCTCTGAGACTGCCCATGACGAGTGTCTCCA...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCATGGTGCCTGAATCCCTaGCCATGTTGCTGTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPWCLNP*PCCCYV Trigger: GACATAACAGCAACATGGGCAGGGATTCAGGCACCA...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGCCTCAGACTGCTTTTTaGCTGCTCCAACACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQPQTAF*LLQHQV Trigger: CACCTGGTGTTGGAGCAGCCAAAAAGCAGTCTGAGG...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGAATGAGAGAGAAGTCTaGCAGCTGCACACCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQNEREV*QLHTVI Trigger: GATGACGGTGTGCAGCTGTCAGACTTCTCTCTCATT...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGTTTCATCGAAGCAGCTaGCACTTCCTTCTGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQFHRSS*HFLLPN Trigger: GTTTGGCAGAAGGAAGTGTCAGCTGCTTCGATGAAA...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGATTGTTCCCCAAGCCTaGCCACACTTGCAGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQIVPQA*PHLQII Trigger: GATTATCTGCAAGTGTGGCCAGGCTTGGGGAACAAT...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCATTGTGTCTGATTCTGTaGTCACAGACGAATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPLCLIL*SQTNLY Trigger: GTACAGATTCGTCTGTGACCACAGAATCAGACACAA...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | CCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCAAATTGACAATGCAGGCCCATCTCTGTaGGACGAGTTAGCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHGHSLSPGDFRTHQIDNAGPSL*DELAKS Trigger: AGACTTGGCTAACTCGTCTCACAGAGATGGGCCTGC...ATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCCCATTTGGTAAGGCCTaGGCTGCAGTTCTGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CHIALHNEVQSYESKCGLPFGKA*AAVLAR Trigger: CCGAGCCAGAACTGCAGCTCAGGCCTTACCAAATGG...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAATGTAAACAGCCACTCTaGTTTTCCCACTCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKCKQPL*FSHSPW Trigger: CCACGGGGAGTGGGAAAACCAGAGTGGCTGTTTACA...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| 3UTR CAA 72 bp | ATGCGTGATATCCTGAATTATCTATATCCCCTTGCTTaGAGTGTGGGCATGGCCTACCAGCCACACGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: MRDILNYLYPLA*SVGMAYQPHGI Trigger: TATCCCGTGTGGCTGGTAGGCCATGCCCACACTCAAAGCAAGGGGATATAGATAATTCAGGATATCACGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGCTCTTTTTGTCTGGATaGCACTTTCATCTGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQLFLSG*HFHLNH Trigger: GTGATTCAGATGAAAGTGTCATCCAGACAAAAAGAG...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTCCATTTGGTAAGGCCTaGGCTGCAGTTCTGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAPFGKA*AAVLAR Trigger: CCGAGCCAGAACTGCAGCTCAGGCCTTACCAAATGG...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCCCCGCGCCAATCAGGTaGTGCGCTTTGACTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLILCSPRSPTENRSSPAPIR*CALTPT Trigger: AGTTGGAGTCAAAGCGCATCACCTGATTGGCGCGGG...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCCTGAGCCACTGCTGGTaGCCAGGACATACGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHIALHNEVQSYESKCGLLSHCW*PGHTCF Trigger: AAAGCACGTATGTCCTGGTCACCAGCAGTGGCTCAG...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAAAGAGGCCATTGTCCCTaGTCCAAGGTGCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVACHIALHNEVQSYESKRGHCP*SKVLSS Trigger: GCTGCTGAGCACCTTGGAGCAGGGACAATGGCCTCT...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCAAATGATATTTTCAGCTaGGTATCGCCACTTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPNDIFS*VSPLNP Trigger: TGGATTAAGTGGCGATACCCAGCTGAAAATATCATT...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGCTGCAGACAGAAAGATaGGGTGGTCCAGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVLQTER*GGPALA Trigger: AGCCAGTGCTGGACCACCTCATCTTTCTGTCTGCAG...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAACTGAGCCACTGCTGGTaGCCAGGACATACGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVACHIALHNEVQSYESKLSHCW*PGHTCF Trigger: AAAGCACGTATGTCCTGGTCACCAGCAGTGGCTCAG...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CCTTCAAGGCCTTTGGATCAGAACAGTCTGGCTGAAACTGATTTCAGCCTTGTACTTCCTCAAATGTTCTaGACAGACGCGATCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSRPLDQNSLAETDFSLVLPQMF*TDAIFA Trigger: CGCAAAGATCGCGTCTGTGCAGAACATTTGAGGAAG...TACAAGGCTGAAATCAGTTTCAGCCAGACTGTTCTGATCCAAAGGCCTTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGATCCAGGCCTTCCTCTaGCACCGTCGTAGCGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVIQAFL*HRRSDK Trigger: CTTATCGCTACGACGGTGGCAGAGGAAGGCCTGGAT...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCTGGAGACACTCGTCATaGGCAGTCTCAGAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHIALHNEVQSYESKCGLWRHSS*AVSEEG Trigger: TCCTTCCTCTGAGACTGCCCATGACGAGTGTCTCCA...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATAATGAGAGAGAAGTCTaGCAGCTGCACACCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QELEVACHIALHNEVQSYNEREV*QLHTVI Trigger: GATGACGGTGTGCAGCTGTCAGACTTCTCTCTCATT...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CCTTCAAGGCCTTTGGATCAGAACAGTCTGGCTGAAACTGATTTCAGCCTTGTAGATGCATCTTCTCAATaGCATGGATGTTTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSRPLDQNSLAETDFSLVDASSQ*HGCFLP Trigger: CGGGAGAAAACATCCATGTCATTGAGAAGATGCATC...TACAAGGCTGAAATCAGTTTCAGCCAGACTGTTCTGATCCAAAGGCCTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAACTGCTCTTTGGTTTCTaGAGACAGAAAGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKLLFGF*RQKDEV Trigger: CACCTCATCTTTCTGTCTGCAGAAACCAAAGAGCAG...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTAGCACTGGCTCCACCTaGATGTACATTTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSASTGST*MYIFSL Trigger: CAGGCTGAAAATGTACATTCAGGTGGAGCCAGTGCT...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGGACAATACCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCTAAGTGATCTTTGGTaGTGTAAACAGCCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRTIPHGHSLSPGDFRTHLSDLW*CKQPLW Trigger: CCAGAGTGGCTGTTTACATCACCAAAGATCACTTAG...ATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCAAATTGACAATCTAAGTGATCTTTGGTaGTGTAAACAGCCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGHSLSPGDFRTHQIDNLSDLW*CKQPLW Trigger: CCAGAGTGGCTGTTTACATCACCAAAGATCACTTAG...ATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGCCTCCTTGTTGGTGTaGTGGCACTCATCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: QELEVACHIALHNEVQSYASLLV*WHSSMI Trigger: TATCATTGATGAGTGCCATCACACCAACAAGGAGGC...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTCCCGCGCCAATCAGGTaGTGCGCTTTGACTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSPAPIR*CALTPT Trigger: AGTTGGAGTCAAAGCGCATCACCTGATTGGCGCGGG...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCAAATTGACAATCTGCTCTTTGGTTTCTaGAGACAGAAAGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHGHSLSPGDFRTHQIDNLLFGF*RQKDEV Trigger: CACCTCATCTTTCTGTCTGCAGAAACCAAAGAGCAG...ATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAAAATCCCTGCCCATGTTaGTGTTATGTCCAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKNPCPC*CYVQDF Trigger: AAAGTCTTGGACATAACAGCAACATGGGCAGGGATT...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTTGGTGCCTGAATCCCTaGCCATGTTGCTGTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAWCLNP*PCCCYV Trigger: GACATAACAGCAACATGGGCAGGGATTCAGGCACCA...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGAATCACTTCCCATGGTaGCTGAATCCCTGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVNHFPW*LNPCPC Trigger: ACATGGGCAGGGATTCAGGCACCATGGGAAGTGATT...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| 3UTR CAA 72 bp | TTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTaGAAGAAACACATGATATGTACTGTGAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSFESFYCSP*KKHMICTVRPS Trigger: GGAAGGCCTCACAGTACATATCATGTGTTTCTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGCCTCCTTGTTGGTGTaGTGGCACTCATCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: TQLVFLILCSPRSPTENRASLLV*WHSSMI Trigger: TATCATTGATGAGTGCCATCACACCAACAAGGAGGC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCAAATTGACAATAATCCCTGCCCATGTTaGTGTTATGTCCAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGHSLSPGDFRTHQIDNNPCPC*CYVQDF Trigger: AAAGTCTTGGACATAACAGCAACATGGGCAGGGATT...ATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGACTTCCTCAAATGTTCTaGACAGACGCGATCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVFLILCSPRSPTENRLPQMF*TDAIFA Trigger: CGCAAAGATCGCGTCTGTGCAGAACATTTGAGGAAG...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGGACAATACCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATGCTGTCATTGAGGACTaGGAACTTCTTTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRTIPHGHSLSPGDFRTHAVIED*ELLFFL Trigger: GAGAAAGAAAAGAAGTTCGCAGTCCTCAATGACAGC...ATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTATCCAGGCCTTCCTCTaGCACCGTCGTAGCGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSIQAFL*HRRSDK Trigger: CTTATCGCTACGACGGTGGCAGAGGAAGGCCTGGAT...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGGCATCATTTCCAGTTTaGCGCAGAACATCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYIRFLSSFESFYCSPLKASFPV*RRTSRK Trigger: CTTCCTGGATGTTCTGCGCCAAACTGGAAATGATGC...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAAAGACTGCCTCCTTGTTaGTGTGATGGCACTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVACHIALHNEVQSYESKRLPPC*CDGTHQ Trigger: TTGATGAGTGCCATCACACCAACAAGGAGGCAGTCT...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAAATGTGCATACTCCTCTaGTTTCATGTTTTGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKMCILL*FHVLNT Trigger: CGTGTTCAAAACATGAAACCAGAGGAGTATGCACAT...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGATTGTTCCCCAAGCCTaGCCACACTTGCAGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVIVPQA*PHLQII Trigger: GATTATCTGCAAGTGTGGCCAGGCTTGGGGAACAAT...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTACTCCTCAGACCTTGTaGATTGTTCCAGTATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSATPQTL*IVPVSC Trigger: ACACGATACTGGAACAATTCACAAGGTCTGAGGAGT...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTCCGAGCAGACCAGCATaGTACAATTTTTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAPSRPA*YNFCRE Trigger: TTCTCTGCAAAAATTGTAGCATGCTGGTCTGCTCGG...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCCTGAATCACTTCCCATaGTGCCTGAATCCCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MFTFLVFCYITESQTKASLNHFP*CLNPCP Trigger: TGGGCAGGGATTCAGGCACCATGGGAAGTGATTCAG...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTCTGAATCACTTCCCATaGTGCCTGAATCCCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSLNHFP*CLNPCP Trigger: TGGGCAGGGATTCAGGCACCATGGGAAGTGATTCAG...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTATGTAAACAGCCACTCTaGTTTTCCCACTCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVCKQPL*FSHSPW Trigger: CCACGGGGAGTGGGAAAACCAGAGTGGCTGTTTACA...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTACCTCAGACTGCTTTTTaGCTGCTCCAACACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVPQTAF*LLQHQV Trigger: CACCTGGTGTTGGAGCAGCCAAAAAGCAGTCTGAGG...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCAGCACTGGCTCCACCTaGATGTACATTTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MFTFLVFCYITESQTKASSTGST*MYIFSL Trigger: CAGGCTGAAAATGTACATTCAGGTGGAGCCAGTGCT...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGACAACTTCTGGAAATaGTATTTTCAGCTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QELEVACHIALHNEVQSYDNFWK*YFQLGI Trigger: GATACCCAGCTGAAAATATCATTTCCAGAAGTTGTC...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGGATGTTGTTATAGACTaGCTCCTTGTTGGTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVDVVID*LLVGVM Trigger: CATCACACCAACAAGGAGGCAGTCTATAACAACATC...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAATTCCAAAATCTTATGTaGATACTCCTCTGGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKFQNLM*ILLWFH Trigger: ATGAAACCAGAGGAGTATGCACATAAGATTTTGGAA...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAAGTCGTTGTATTGCTTTaGAATGCTTCTTTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKPQAKAFLGCESNSWWKVVVLL*NASFDF Trigger: AAAGTCAAAAGAAGCATTGCAAAGCAATACAACGAC...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCGGTGTCATATTGACATaGTGCATCTTCTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVFLILCSPRSPTENRSSGVILT*CIFSMT Trigger: TGTCATTGAGAAGATGCATCATGTCAATATGACACC...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATCAAATTGACAATATCTTTTTAAGAATCTaGTCTTTGGTTTCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHGHSLSPGDFRTHQIDNIFLRI*SLVSAD Trigger: GTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGAT...ATTGTCAATTTGATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTGCATCATTTCCAGTTTaGCGCAGAACATCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSASFPV*RRTSRK Trigger: CTTCCTGGATGTTCTGCGCCAAACTGGAAATGATGC...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGCCACCTGTTAGTTCTTaGAATAGTGCATCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVPPVSS*NSASFP Trigger: TGGAAATGATGCACTATTCCAAGAACTAACAGGTGG...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTAGACTGCCTCCTTGTTaGTGTGATGGCACTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSRLPPC*CDGTHQ Trigger: TTGATGAGTGCCATCACACCAACAAGGAGGCAGTCT...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTATGTGCATACTCCTCTaGTTTCATGTTTTGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAMCILL*FHVLNT Trigger: CGTGTTCAAAACATGAAACCAGAGGAGTATGCACAT...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGAGTCCCTTGAATTCTaGTGTCATATTGACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVFLILCSPRSPTENRESLEF*CHIDMM Trigger: CATCATGTCAATATGACACCAGAATTCAAGGGACTC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAAGAGTCCCTTGAATTCTaGTGTCATATTGACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVACHIALHNEVQSYESKESLEF*CHIDMM Trigger: CATCATGTCAATATGACACCAGAATTCAAGGGACTC...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCATTTGGTGTTTGAGTTaGCCAAGATTCTCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLILCSPRSPTENRSSIWCLS*PRFSFT Trigger: AGTGAAAGAGAATCTTGGTCAACTCAAACACCAAAT...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTACTCCTCAGACCTTGTaGATTGTTCCAGTATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSTPQTL*IVPVSC Trigger: ACACGATACTGGAACAATTCACAAGGTCTGAGGAGT...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTACTTTGCATTTTCCATaGTCCACTGGGAAAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSTLHFP*STGKVR Trigger: ACGCACTTTCCCAGTGGATCATGGAAAATGCAAAGT...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAACTTTGCATTTTCCATaGTCCACTGGGAAAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVTLHFP*STGKVR Trigger: ACGCACTTTCCCAGTGGATCATGGAAAATGCAAAGT...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCGATGCATCTTCTCAATaGCATGGATGTTTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MFTFLVFCYITESQTKASDASSQ*HGCFLP Trigger: CGGGAGAAAACATCCATGTCATTGAGAAGATGCATC...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGATTCTGGTGTCATATTaGCATGATGCATCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVILVSY*HDASSQ Trigger: TTGAGAAGATGCATCATGTCAATATGACACCAGAAT...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTATGCCAAACTTGTGTCTaGTTCTGTGTTGTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVCQTCV*FCVVFW Trigger: CCAGAAGACAACACAGAATCAGACACAAGTTTGGCA...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCATTCCCGCTGTTTCCTaGAGCAGAAATCCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MFTFLVFCYITESQTKASIPAVS*SRNPIS Trigger: AGAAATCGGATTTCTGCTGCAGGAAACAGCGGGAAT...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAATTCCCGCTGTTTCCTaGAGCAGAAATCCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVIPAVS*SRNPIS Trigger: AGAAATCGGATTTCTGCTGCAGGAAACAGCGGGAAT...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCTTGTTTCTCAGCTTCTaGTTCAAATATCGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLILCSPRSPTENRSSLFLSF*FKYRLM Trigger: CATGAGACGATATTTGAAGCAGAAGCTGAGAAACAA...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATTTTCCAGGATACTTTaGACCTGCAATTCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVFLILCSPRSPTENRFSRIL*TCNSKI Trigger: GATTTTGGAATTGCAGGTGCAAAGTATCCTGGAAAA...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGTCGTTGTATTGCTTTaGAATGCTTCTTTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QELEVACHIALHNEVQSYVVVLL*NASFDF Trigger: AAAGTCAAAAGAAGCATTGCAAAGCAATACAACGAC...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTCCGAGCAGACCAGCATaGTACAATTTTTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSPSRPA*YNFCRE Trigger: TTCTCTGCAAAAATTGTAGCATGCTGGTCTGCTCGG...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCCCATTTCTTCAAATATaGGTTGAACTCTTTTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHIALHNEVQSYESKCGLPFLQI*VELFSE Trigger: TTCCGAAAAGAGTTCAACCCATATTTGAAGAAATGG...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTAATGATATTTTCAGCTaGGTATCGCCACTTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSANDIFS*VSPLNP Trigger: TGGATTAAGTGGCGATACCCAGCTGAAAATATCATT...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTATCTTTTTAAGAATCTaGTCTTTGGTTTCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAIFLRI*SLVSAD Trigger: GTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGAT...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCGATGTTGTTATAGACTaGCTCCTTGTTGGTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MFTFLVFCYITESQTKASDVVID*LLVGVM Trigger: CATCACACCAACAAGGAGGCAGTCTATAACAACATC...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGTTCCAAAATCTTATGTaGATACTCCTCTGGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVFQNLM*ILLWFH Trigger: ATGAAACCAGAGGAGTATGCACATAAGATTTTGGAA...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTGCATGCTACAATTTTTaGAGAGAAGTGTTATTAACG | + |
|
Preference number: 4 (lower is better) Translates to: TLHCTMKCKVMRANVDSAACYNF*REVLLT Trigger: CGTTAATAACACTTCTCTGCAAAAATTGTAGCATGC...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CCA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGCCATTTCTTCAAATATaGGTTGAACTCTTTTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVPFLQI*VELFSE Trigger: TTCCGAAAAGAGTTCAACCCATATTTGAAGAAATGG...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTCTCTTTTTGTCTGGATaGCACTTTCATCTGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSLFLSG*HFHLNH Trigger: GTGATTCAGATGAAAGTGTCATCCAGACAAAAAGAG...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGACAACTTCTGGAAATaGTATTTTCAGCTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVDNFWK*YFQLGI Trigger: GATACCCAGCTGAAAATATCATTTCCAGAAGTTGTC...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGGTGTCATATTGACATaGTGCATCTTCTCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVGVILT*CIFSMT Trigger: TGTCATTGAGAAGATGCATCATGTCAATATGACACC...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR TCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAATTTGGTGTTTGAGTTaGCCAAGATTCTCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVIWCLS*PRFSFT Trigger: AGTGAAAGAGAATCTTGGTCAACTCAAACACCAAAT...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | GAAACTGATTTCAGCCTTGTAAGAAAACGACATCTAGATGTTTGGCATACAAAATTGTTTCTCAGCTTCTaGTTCAAATATCGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ETDFSLVRKRHLDVWHTKLFLSF*FKYRLM Trigger: CATGAGACGATATTTGAAGCAGAAGCTGAGAAACAA...TTTTGTATGCCAAACATCTAGATGTCGTTTTCTTACAAGGCTGAAATCAGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTTTTTCCAGGATACTTTaGACCTGCAATTCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FTFLVFCYITESQTKASSFSRIL*TCNSKI Trigger: GATTTTGGAATTGCAGGTGCAAAGTATCCTGGAAAA...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR GCA 90 bp | GAAATGATTTATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGCATGCTACAATTTTTaGAGAGAAGTGTTATTAACG | + |
|
Preference number: 4 (lower is better) Translates to: EMIYCSLQFEVLIHDCVVACYNF*REVLLT Trigger: CGTTAATAACACTTCTCTGCAAAAATTGTAGCATGC...TACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATAAATCATTTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 90 bp | GCGGCTAGGGGATTGCCACTGTGCTCTAGGGCCTCCACGAACATCTaGGTCCATCCCAGAGGCCATTGTCCCTGCTCCAAGGTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AARGLPLCSRASTNI*VHPRGHCPCSKVLS Trigger: GCTGAGCACCTTGGAGCAGGGACAATGGCCTCTGGGATGGACGCAGATGTTCGTGGAGGCCCTAGAGCACAGTGGCAATCCCCTAGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 90 bp | AGGGCCTCCACGAACATCTGCGTCCATCCCAGAGGCCATTGTCCCTaGTCCAAGGTGCTCAGCAGCAGTTCTGCCGCGCTGGTGTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: RASTNICVHPRGHCP*SKVLSSSSAALVLP Trigger: TGGTAACACCAGCGCGGCAGAACTGCTGCTGAGCACCTTGGAGCAGGGACAATGGCCTCTGGGATGGACGCAGATGTTCGTGGAGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 90 bp | ATCAGAAGTTTGTCCACCAAAGTGGGCTGGAGGAGGGTCAGCAAGTaGAGACACTCGTCATGGGCAGTCTCAGAGGAAGGAGAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRSLSTKVGWRRVSK*RHSSWAVSEEGEGR Trigger: TCTGCCCTCTCCTTCCTCTGAGACTGCCCATGACGAGTGTCTCCACTTGCTGACCCTCCTCCAGCCCACTTTGGTGGACAAACTTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCAGCCTCGTCATCACTCTaGTCGCTGTCATTGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPASSSL*SLSLRT Trigger: AGTCCTCAATGACAGCGACAAGAGTGATGACGAGGC...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS GCA 90 bp | TCCCAGAGGCCATTGTCCCTGCTCCAAGGTGCTCAGCAGCAGTTCTaGCGCGCTGGTGTTACCACAGGTGTTGATCTTTTTAAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQRPLSLLQGAQQQF*RAGVTTGVDLFKNL Trigger: CAGATTCTTAAAAAGATCAACACCTGTGGTAACACCAGCGCGGCAGAACTGCTGCTGAGCACCTTGGAGCAGGGACAATGGCCTCTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 90 bp | CGCGCCAATCAGGTGATGCGCTTTGACTCCAACTTCCGCAAACTTTaGATTTTCCATGATCCACTGGGAAAGTGCGTAGGTGCTCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RANQVMRFDSNFRKL*IFHDPLGKCVGALS Trigger: CGACAGAGCACCTACGCACTTTCCCAGTGGATCATGGAAAATGCAAAGTTTGCGGAAGTTGGAGTCAAAGCGCATCACCTGATTGGCGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 90 bp | GTGTCCAAGACATCGTTAATCAGAAGTTTGTCCACCAAAGTGGGCTaGAGGAGGGTCAGCAAGTGGAGACACTCGTCATGGGCAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSKTSLIRSLSTKVG*RRVSKWRHSSWAVS Trigger: TGAGACTGCCCATGACGAGTGTCTCCACTTGCTGACCCTCCTCCAGCCCACTTTGGTGGACAAACTTCTGATTAACGATGTCTTGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAATTGGGCCACTTCCATTaGGTAAGGCCTGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KKPQAKAFLGCESNSWWKLGHFH*VRPELQ Trigger: CTGCAGCTCAGGCCTTACCAAATGGAAGTGGCCCAA...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS TCA 90 bp | CATCTTCTCTCGGAAATCATTAACAATCTCCCGTTCGGTAACTCCTaGGCCACTGCTGGTGACCAGGACATACGTGCTTTCATCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLSEIINNLPFGNS*ATAGDQDIRAFISS Trigger: AGAGCTGATGAAAGCACGTATGTCCTGGTCACCAGCAGTGGCTCAGGAGTTACCGAACGGGAGATTGTTAATGATTTCCGAGAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 90 bp | TCTGCCGCGCTGGTGTTACCACAGGTGTTGATCTTTTTAAGAATCTaGTCTTTGGTTTCTGCAGACAGAAAGATGAGGTGGTCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SAALVLPQVLIFLRI*SLVSADRKMRWSST Trigger: AGTGCTGGACCACCTCATCTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGATCAACACCTGTGGTAACACCAGCGCGGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TACCAGCCACACGGGATAGGAATGCCCAGACATCCTTATCCCAGGTCACTGCCAAATGGCTGGTTTGTTTaGTTTCTTGAGGTCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YQPHGIGMPRHPYPRSLPNGWFV*FLEVIV Trigger: AACAATGACCTCAAGAAACAAAACAAACCAGCCATT...TGGCAGTGACCTGGGATAAGGATGTCTGGGCATTCCTATCCCGTGTGGCTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS TCA 90 bp | CCCTGCCCATGTTGCTGTTATGTCCAAGACTTTCATCGAAGCAGCTaGCACTTCCTTCTGCCAAACTTGTGTCTGATTCTGTGTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PCPCCCYVQDFHRSS*HFLLPNLCLILCCL Trigger: AAGACAACACAGAATCAGACACAAGTTTGGCAGAAGGAAGTGTCAGCTGCTTCGATGAAAGTCTTGGACATAACAGCAACATGGGCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112459.4 |
||
| CDS CCA 90 bp | CAGCCTCCACCTGTTAGTTCTTGGAATAGTGCATCATTTCCAGTTTaGCGCAGAACATCCAGGAAGGTAGAAAACCAGTTTTCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPPPVSSWNSASFPV*RRTSRKVENQFSFC Trigger: GCAGAAGGAAAACTGGTTTTCTACCTTCCTGGATGTTCTGCGCCAAACTGGAAATGATGCACTATTCCAAGAACTAACAGGTGGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 90 bp | TCCGTTTCGTCCAGTTTCAAAGATTTCTTTACATCGCCCTTAAGTTaGTCATTGCAACTGCTGGCCTCGTCATCACTCTTGTCGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSFKDFFTSPLS*SLQLLASSSLLSLS Trigger: TGACAGCGACAAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGGCGATGTAAAGAAATCTTTGAAACTGGACGAAACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCTTAGCCAAGTCTGTGTaGTCTTCTGGGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CHIALHNEVQSYESKCGLLAKSV*SSGQPP Trigger: TGGAGGCTGCCCAGAAGACAACACAGACTTGGCTAA...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | CCTTCAAGGCCTTTGGATCAGAACAGTCTGGCTGAAACTGATTTCAGCCTTGTAGAATCCCTGCCCATGTaGCTGTTATGTCCAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PSRPLDQNSLAETDFSLVESLPM*LLCPRL Trigger: AAGTCTTGGACATAACAGCAACATGGGCAGGGATTC...TACAAGGCTGAAATCAGTTTCAGCCAGACTGTTCTGATCCAAAGGCCTTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | ATAACTCCAACTTCAGGGGATCTGGTGCCTTTCTCTGACCTCCAGAGGCACCAGGCTAACATTACCTTATaGACAAGAACGATAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITPTSGDLVPFSDLQRHQANITL*TRTITF Trigger: GAAGGTTATCGTTCTTGTCAATAAGGTAATGTTAGC...CTGGTGCCTCTGGAGGTCAGAGAAAGGCACCAGATCCCCTGAAGTTGGAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS GCA 90 bp | GTTACCACAGGTGTTGATCTTTTTAAGAATCTGCTCTTTGGTTTCTaGAGACAGAAAGATGAGGTGGTCCAGCACTGGCTCCACCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VTTGVDLFKNLLFGF*RQKDEVVQHWLHLN Trigger: ATTCAGGTGGAGCCAGTGCTGGACCACCTCATCTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGATCAACACCTGTGGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGGCCTCGTCATCACTCTaGTCGCTGTCATTGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVASSSL*SLSLRT Trigger: AGTCCTCAATGACAGCGACAAGAGTGATGACGAGGC...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGCCCTTAAGTTGGTCATaGCAACTGCTGGCCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVPLSWS*QLLASS Trigger: TGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGG...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 90 bp | ATGTCTCCAGGTGGCTATATGCATCAATCATTCGGATCGTGTCGTTaGTTTGTAGGGCTTCGTTGTACTTCCTCAAATGTTCTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: MSPGGYMHQSFGSCR*FVGLRCTSSNVLHR Trigger: TCTGTGCAGAACATTTGAGGAAGTACAACGAAGCCCTACAAATCAACGACACGATCCGAATGATTGATGCATATAGCCACCTGGAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | AAGAAGCCACAGGCTAAAGCATTCCTAGGATGTGAGAGCAATTCCTGGTGGAAATGTTTCTTGAGGTCATaGTTTCTCAGCTTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KKPQAKAFLGCESNSWWKCFLRS*FLSFCF Trigger: GAAGCAGAAGCTGAGAAACAATGACCTCAAGAAACA...TTTCCACCAGGAATTGCTCTCACATCCTAGGAATGCTTTAGCCTGTGGCTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | TTTAGGACAATACCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATAATTCCACCCACTTCTaGTACTGTTTCTTCGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FRTIPHGHSLSPGDFRTHNSTHF*YCFFGE Trigger: CTCACCGAAGAAACAGTACAAGAAGTGGGTGGAATT...ATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTTTGGGCCACTTCCATTaGGTAAGGCCTGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTFLVFCYITESQTKASSLGHFH*VRPELQ Trigger: CTGCAGCTCAGGCCTTACCAAATGGAAGTGGCCCAA...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGGACAATACCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATACAATATTGCACTCTTaGATATCCAGGCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FRTIPHGHSLSPGDFRTHTILHS*ISRPSS Trigger: AGAGGAAGGCCTGGATATCAAAGAGTGCAATATTGT...ATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | CCTTCAAGGCCTTTGGATCAGAACAGTCTGGCTGAAACTGATTTCAGCCTTGTACTTTTCCAGGATACTTaGCACCTGCAATTCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSRPLDQNSLAETDFSLVLFQDT*HLQFQN Trigger: ATTTTGGAATTGCAGGTGCAAAGTATCCTGGAAAAG...TACAAGGCTGAAATCAGTTTCAGCCAGACTGTTCTGATCCAAAGGCCTTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | TGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAATTCCACCCACTTCTaGTACTGTTTCTTCGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CHIALHNEVQSYESKCGLNSTHF*YCFFGE Trigger: CTCACCGAAGAAACAGTACAAGAAGTGGGTGGAATT...GAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGGACAATACCTCATGGGCATTCCCTGAGCCCAGGTGATTTTAGAACTCATGGTTTGTTTTGTTTCTaGAGGTCATTGTTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRTIPHGHSLSPGDFRTHGLFCF*RSLFLS Trigger: GCTGAGAAACAATGACCTCAAGAAACAAAACAAACC...ATGAGTTCTAAAATCACCTGGGCTCAGGGAATGCCCATGAGGTATTGTCCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCCCCTTAAGTTGGTCATaGCAACTGCTGGCCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MFTFLVFCYITESQTKASPLSWS*QLLASS Trigger: TGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGG...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATTTAAGAATCTGCTCTTaGGTTTCTGCAGACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QELEVACHIALHNEVQSYLRICS*VSADRK Trigger: CTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAA...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTTTCTTGAGGTCATaGTTTCTCAGCTTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVACHIALHNEVQSYESKCFLRS*FLSFCF Trigger: GAAGCAGAAGCTGAGAAACAATGACCTCAAGAAACA...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGCATGGTTCCTTTATTaGGTGTTTGAGTTGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVFLILCSPRSPTENRAWFLY*VFELTK Trigger: CTTGGTCAACTCAAACACCAAATAAAGGAACCATGC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATATTTGTAGGGCTTCGTaGTACTTCCTCAAATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QELEVACHIALHNEVQSYICRAS*YFLKCS Trigger: AGAACATTTGAGGAAGTACAACGAAGCCCTACAAAT...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCACAATATTGCACTCTTaGATATCCAGGCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVFLILCSPRSPTENRSSTILHS*ISRPSS Trigger: AGAGGAAGGCCTGGATATCAAAGAGTGCAATATTGT...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATTAAGAATCTGCTCTTaGGTTTCTGCAGACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EVACHIALHNEVQSYESKLRICS*VSADRK Trigger: CTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAA...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGTGTTACCACAGGTGTaGATCTTTTTAAGAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVFLILCSPRSPTENRVLPQV*IFLRIC Trigger: GCAGATTCTTAAAAAGATCAACACCTGTGGTAACAC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGGTGTTACCACAGGTGTaGATCTTTTTAAGAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVVLPQV*IFLRIC Trigger: GCAGATTCTTAAAAAGATCAACACCTGTGGTAACAC...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTGAATCCCTGCCCATGTaGCTGTTATGTCCAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: FTFLVFCYITESQTKASSESLPM*LLCPRL Trigger: AAGTCTTGGACATAACAGCAACATGGGCAGGGATTC...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAATGTGGACTCAGCTGGAGTTTTCAAGGATTaGAGCAGTGCTGATAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLHCTMKCKVMRANVDSAGVFKD*SSADNN Trigger: GTTATTATCAGCACTGCTCAAATCCTTGAAAACTCC...AGCTGAGTCCACATTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGATCTTCCGGTTTGTTTTGTTTCTaGAGGTCATTGTTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFLILCSPRSPTENRSSGLFCF*RSLFLS Trigger: GCTGAGAAACAATGACCTCAAGAAACAAAACAAACC...GGAAGATCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | AGTTACATAAGATTCCTTAGTAGCTTTGAGAGTTTCTACTGCTCGCCCTTGAAGACTAATGACTTCTTTTaGTTCAGTCTGAGTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SYIRFLSSFESFYCSPLKTNDFF*FSLSHG Trigger: CCCATGACTCAGACTGAACAAAAAGAAGTCATTAGT...CTTCAAGGGCGAGCAGTAGAAACTCTCAAAGCTACTAAGGAATCTTATGTAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCTTGAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATCTCTGGTTTCATGTTTaGAACACGGTTAATAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QELEVACHIALHNEVQSYLWFHV*NTVNSF Trigger: AAAGCTATTAACCGTGTTCAAAACATGAAACCAGAG...ATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTCAAGCTCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAACTTTTCCAGGATACTTaGCACCTGCAATTCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EVACHIALHNEVQSYESKLFQDT*HLQFQN Trigger: ATTTTGGAATTGCAGGTGCAAAGTATCCTGGAAAAG...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAAAACGATGGATTGTCGTaGTATTGCTTTGCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EVACHIALHNEVQSYESKNDGLS*YCFAML Trigger: AAGCATTGCAAAGCAATACAACGACAATCCATCGTT...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAACTGATTTCAGCCTTGTAAGAAAACGACATCTAGATGTTTGGCATACAAAATTCCTTCTGCCAAACTaGTGTCTGATTCTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETDFSLVRKRHLDVWHTKFLLPN*CLILWS Trigger: TGACCACAGAATCAGACACAAGTTTGGCAGAAGGAA...TTTTGTATGCCAAACATCTAGATGTCGTTTTCTTACAAGGCTGAAATCAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGCTAACATTACCTTATaGACAAGAACGATAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQLVFLILCSPRSPTENRANITL*TRTITF Trigger: GAAGGTTATCGTTCTTGTCAATAAGGTAATGTTAGC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGCTTGCAGTTTGAGGTTTTAATCCATGACTGTGTGGTAGTCACAGTGAATGGCTGGTTTGTTTaGTTTCTTGAGGTCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YCSLQFEVLIHDCVVVTVNGWFV*FLEVIV Trigger: AACAATGACCTCAAGAAACAAAACAAACCAGCCATT...CACTGTGACTACCACACAGTCATGGATTAAAACCTCAAACTGCAAGCTACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGAGCAATCACAAATTTCTaGCATGGTTCCTTTATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVFLILCSPRSPTENRAITNF*HGSFIW Trigger: CCAAATAAAGGAACCATGCAAGAAATTTGTGATTGC...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGCTTGCCACATTGCATTGCACAATGAAGTGCAAAGTTATGAGAGCAAAGCAATCACAAATTTCTaGCATGGTTCCTTTATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVACHIALHNEVQSYESKAITNF*HGSFIW Trigger: CCAAATAAAGGAACCATGCAAGAAATTTGTGATTGC...TTTGCTCTCATAACTTTGCACTTCATTGTGCAATGCAATGTGGCAAGCTACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCTAGTTTTCTTAATTTTATGTAGCCCGAGATCACCCACAGAGAACAGACTCTGGTTTCATGTTTaGAACACGGTTAATAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TQLVFLILCSPRSPTENRLWFHV*NTVNSF Trigger: AAAGCTATTAACCGTGTTCAAAACATGAAACCAGAG...TCTGTTCTCTGTGGGTGATCTCGGGCTACATAAAATTAAGAAAACTAGCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTGCATGGTTCCTTTATTaGGTGTTTGAGTTGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTFLVFCYITESQTKASSAWFLY*VFELTK Trigger: CTTGGTCAACTCAAACACCAAATAAAGGAACCATGC...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTTTCCTTCTGCCAAACTaGTGTCTGATTCTGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FTFLVFCYITESQTKASSFLLPN*CLILCC Trigger: ACAACACAGAATCAGACACAAGTTTGGCAGAAGGAA...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112459.4 |
||
| CDS CCA 90 bp | AAATGGATTTTCTCTGGTGTCATCAGCAATCACAAATTTCTTGCATaGTTCCTTTATTTGGTGTTTGAGTTGACCAAGATTCTCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KWIFSGVISNHKFLA*FLYLVFELTKILFH Trigger: GTGAAAGAGAATCTTGGTCAACTCAAACACCAAATAAAGGAACCATGCAAGAAATTTGTGATTGCTGATGACACCAGAGAAAATCCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCGGAGTTTTCAAGGATTaGAGCAGTGCTGATAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: MFTFLVFCYITESQTKASGVFKD*SSADNN Trigger: GTTATTATCAGCACTGCTCAAATCCTTGAAAACTCC...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCATTTGTAGGGCTTCGTaGTACTTCCTCAAATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MFTFLVFCYITESQTKASICRAS*YFLKCS Trigger: AGAACATTTGAGGAAGTACAACGAAGCCCTACAAAT...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCACTAATGACTTCTTTTaGTTCAGTCTGAGTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: MFTFLVFCYITESQTKASTNDFF*FSLSHG Trigger: CCCATGACTCAGACTGAACAAAAAGAAGTCATTAGT...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | GAAACTGATTTCAGCCTTGTAAGAAAACGACATCTAGATGTTTGGCATACAAAAAACGATGGATTGTCGTaGTATTGCTTTGCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETDFSLVRKRHLDVWHTKNDGLS*YCFAML Trigger: AAGCATTGCAAAGCAATACAACGACAATCCATCGTT...TTTTGTATGCCAAACATCTAGATGTCGTTTTCTTACAAGGCTGAAATCAGTTTC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS TCA 90 bp | GCAATCACAAATTTCTTGCATGGTTCCTTTATTTGGTGTTTGAGTTaGCCAAGATTCTCTTTCACTGTTTTAATGGTAAAGGCATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AITNFLHGSFIWCLS*PRFSFTVLMVKASR Trigger: TCTTGATGCCTTTACCATTAAAACAGTGAAAGAGAATCTTGGTCAACTCAAACACCAAATAAAGGAACCATGCAAGAAATTTGTGATTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 90 bp | TGCAATTCCAAAATCTTATGTGCATACTCCTCTGGTTTCATGTTTTaGACACGGTTAATAGCTTTATACATCATCTTCTCTCGGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: CNSKILCAYSSGFMF*TRLIALYIIFSRKS Trigger: TGATTTCCGAGAGAAGATGATGTATAAAGCTATTAACCGTGTTCAAAACATGAAACCAGAGGAGTATGCACATAAGATTTTGGAATTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTCTTGGATTGTCGTTGTATaGCTTTGCAATGCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FTFLVFCYITESQTKASSWIVVV*LCNASF Trigger: AAAAGAAGCATTGCAAAGCAATACAACGACAATCCA...AGAGGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACATTTTTGGTGTTCTGTTACATCACTGAAAGCCAAACAAAAGCATCCTGGATTGTCGTTGTATaGCTTTGCAATGCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MFTFLVFCYITESQTKASWIVVV*LCNASF Trigger: AAAAGAAGCATTGCAAAGCAATACAACGACAATCCA...GGATGCTTTTGTTTGGCTTTCAGTGATGTAACAGAACACCAAAAATGTAAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | GCGTCCATCCCAGAGGCCATTGTCCCTGCTCCAAGGTaGTCAGCAGCAGTTCTGCCGCGCTGGTGTTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASIPEAIVPAPR*SAAVLPRWCYH Trigger: GTGGTAACACCAGCGCGGCAGAACTGCTGCTGAGCACCTTGGAGCAGGGACAATGGCCTCTGGGATGGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | ACGAACATCTGCGTCCATCCCAGAGGCCATTGTCCCTaGTCCAAGGTGCTCAGCAGCAGTTCTGCCGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TNICVHPRGHCP*SKVLSSSSAAL Trigger: CAGCGCGGCAGAACTGCTGCTGAGCACCTTGGAGCAGGGACAATGGCCTCTGGGATGGACGCAGATGTTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | GGCTGGAGGAGGGTCAGCAAGTGGAGACACTCGTCATaGGCAGTCTCAGAGGAAGGAGAGGGCAGATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GWRRVSKWRHSS*AVSEEGEGRSV Trigger: CACTGATCTGCCCTCTCCTTCCTCTGAGACTGCCCATGACGAGTGTCTCCACTTGCTGACCCTCCTCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | TTGTCCACCAAAGTGGGCTGGAGGAGGGTCAGCAAGTaGAGACACTCGTCATGGGCAGTCTCAGAGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSTKVGWRRVSK*RHSSWAVSEEG Trigger: TCCTTCCTCTGAGACTGCCCATGACGAGTGTCTCCACTTGCTGACCCTCCTCCAGCCCACTTTGGTGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | GGCTTGACTTCACTGCTGTGCCCCGCGCCAATCAGGTaGTGCGCTTTGACTCCAACTTCCGCAAACTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLTSLLCPAPIR*CALTPTSANFA Trigger: TGCAAAGTTTGCGGAAGTTGGAGTCAAAGCGCATCACCTGATTGGCGCGGGGCACAGCAGTGAAGTCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | CTAGAGCTGGTTGGGCCACTTCCATTTGGTAAGGCCTaGGCTGCAGTTCTGGCTCGGGGGATACTCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LELVGPLPFGKA*AAVLARGILFL Trigger: CAAAAAGAGTATCCCCCGAGCCAGAACTGCAGCTCAGGCCTTACCAAATGGAAGTGGCCCAACCAGCTCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | CCATTGTCCCTGCTCCAAGGTGCTCAGCAGCAGTTCTaGCGCGCTGGTGTTACCACAGGTGTTGATCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSLLQGAQQQF*RAGVTTGVDLF Trigger: AAAAAGATCAACACCTGTGGTAACACCAGCGCGGCAGAACTGCTGCTGAGCACCTTGGAGCAGGGACAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | GGCCACTTCCATTTGGTAAGGCCTGAGCTGCAGTTCTaGCTCGGGGGATACTCTTTTTGTCTGGATGACACT | + |
|
Preference number: 6 (lower is better) Translates to: GHFHLVRPELQF*LGGYSFCLDDT Trigger: AGTGTCATCCAGACAAAAAGAGTATCCCCCGAGCCAGAACTGCAGCTCAGGCCTTACCAAATGGAAGTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | CTTCTGCACAATCCTTCTCAGCAGCTCTCTTACACCTaGCTCATTCCCGCTGTTTCCTGCAGCAGAAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLHNPSQQLSYT*LIPAVSCSRNP Trigger: CGGATTTCTGCTGCAGGAAACAGCGGGAATGAGTCAGGTGTAAGAGAGCTGCTGAGAAGGATTGTGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | TATGTCGTCTACGTTCCAGGCCTCTGTCTCCAGACTTaGCTCATCGACAGCAGGCAGAAGACACTCATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: YVVYVPGLCLQT*LIDSRQKTLIS Trigger: GCTAATGAGTGTCTTCTGCCTGCTGTCGATGAGTCAAGTCTGGAGACAGAGGCCTGGAACGTAGACGACATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS TCA 72 bp | GCAGTTCTGGCTCGGGGGATACTCTTTTTGTCTGGATaGCACTTTCATCTGAATCACTTCCCATGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVLARGILFLSG*HFHLNHFPWCL Trigger: CAGGCACCATGGGAAGTGATTCAGATGAAAGTGTCATCCAGACAAAAAGAGTATCCCCCGAGCCAGAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | TCGGAAATCATTAACAATCTCCCGTTCGGTAACTCCTaGGCCACTGCTGGTGACCAGGACATACGTGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SEIINNLPFGNS*ATAGDQDIRAF Trigger: GAAAGCACGTATGTCCTGGTCACCAGCAGTGGCTCAGGAGTTACCGAACGGGAGATTGTTAATGATTTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | TCGAAGCAAGTGTCCAAGACATCGTTAATCAGAAGTTaGTCCACCAAAGTGGGCTGGAGGAGGGTCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKQVSKTSLIRS*STKVGWRRVSK Trigger: CTTGCTGACCCTCCTCCAGCCCACTTTGGTGGACAAACTTCTGATTAACGATGTCTTGGACACTTGCTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | CAGATGCCTGCTTCTTCTTGTCTAAGTGATCTTTGGTaGTGTAAACAGCCACTCTGGTTTTCCCACTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QMPASSCLSDLW*CKQPLWFSHSP Trigger: CGGGGAGTGGGAAAACCAGAGTGGCTGTTTACATCACCAAAGATCACTTAGACAAGAAGAAGCAGGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | CAGGTGATGCGCTTTGACTCCAACTTCCGCAAACTTTaGATTTTCCATGATCCACTGGGAAAGTGCGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QVMRFDSNFRKL*IFHDPLGKCVG Trigger: ACCTACGCACTTTCCCAGTGGATCATGGAAAATGCAAAGTTTGCGGAAGTTGGAGTCAAAGCGCATCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | AGCTGCAGTTCTGGCTCGGGGGATACTCTTTTTGTCTaGATGACACTTTCATCTGAATCACTTCCCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSGSGDTLFV*MTLSSESLPMV Trigger: CACCATGGGAAGTGATTCAGATGAAAGTGTCATCCAGACAAAAAGAGTATCCCCCGAGCCAGAACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | CAACTGCTGGCCTCGTCATCACTCTTGTCGCTGTCATaGAGGACTGCGAACTTCTTTTCTTTCTCATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLASSSLLSLS*RTANFFSFSSV Trigger: CACTGATGAGAAAGAAAAGAAGTTCGCAGTCCTCAATGACAGCGACAAGAGTGATGACGAGGCCAGCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | AGTTGGTCATTGCAACTGCTGGCCTCGTCATCACTCTaGTCGCTGTCATTGAGGACTGCGAACTTCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SWSLQLLASSSL*SLSLRTANFFS Trigger: AGAAAAGAAGTTCGCAGTCCTCAATGACAGCGACAAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | ACACTTCCTTCTGCCAAACTTGTGTCTGATTCTGTGTaGTCTTCTGGGCAGCCTCCACCTGTTAGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLPSAKLVSDSV*SSGQPPPVSSW Trigger: CCAAGAACTAACAGGTGGAGGCTGCCCAGAAGACAACACAGAATCAGACACAAGTTTGGCAGAAGGAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | AAGGTGCTCAGCAGCAGTTCTGCCGCGCTGGTGTTACCACAGGTGTaGATCTTTTTAAGAATCTGCTCTTTGGTTTCTGCAGACAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KVLSSSSAALVLPQV*IFLRICSLVSADRK Trigger: CTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGATCAACACCTGTGGTAACACCAGCGCGGCAGAACTGCTGCTGAGCACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | AAGCAGCTGACACTTCCTTCTGCCAAACTTGTGTCTGATTCTGTGTaGTCTTCTGGGCAGCCTCCACCTGTTAGTTCTTGGAATAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KQLTLPSAKLVSDSV*SSGQPPPVSSWNSA Trigger: TGCACTATTCCAAGAACTAACAGGTGGAGGCTGCCCAGAAGACAACACAGAATCAGACACAAGTTTGGCAGAAGGAAGTGTCAGCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | ATCCGTTTCGTCCAGTTTCAAAGATTTCTTTACATCGCCCTTAAGTaGGTCATTGCAACTGCTGGCCTCGTCATCACTCTTGTCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IRFVQFQRFLYIALK*VIATAGLVITLVAV Trigger: GACAGCGACAAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGGCGATGTAAAGAAATCTTTGAAACTGGACGAAACGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | GAAGCAGCTGACACTTCCTTCTGCCAAACTTGTGTCTaGTTCTGTGGTCACAGACGAATCTGTACAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAADTSFCQTCV*FCGHRRICTRS Trigger: GCTTCTTGTACAGATTCGTCTGTGACCACAGAATCAGACACAAGTTTGGCAGAAGGAAGTGTCAGCTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028259.12 |
||
| CDS TCA 72 bp | AACTGCTGGCCTCGTCATCACTCTTGTCGCTGTCATTaGGGACTGCGAACTTCTTTTCTTTCTCATCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NCWPRHHSCRCH*GLRTSFLSHQC Trigger: ACACTGATGAGAAAGAAAAGAAGTTCGCAGTCCTCAATGACAGCGACAAGAGTGATGACGAGGCCAGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | ATCATTCGGATCGTGTCGTTGATTTGTAGGGCTTCGTaGTACTTCCTCAAATGTTCTGCACAGACGCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: IIRIVSLICRAS*YFLKCSAQTRS Trigger: AGATCGCGTCTGTGCAGAACATTTGAGGAAGTACAACGAAGCCCTACAAATCAACGACACGATCCGAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | TTCAAAGATTTCTTTACATCGCCCTTAAGTTGGTCATaGCAACTGCTGGCCTCGTCATCACTCTTGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FKDFFTSPLSWS*QLLASSSLLSL Trigger: CAGCGACAAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGGCGATGTAAAGAAATCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | TGTTGCTGTTATGTCCAAGACTTTCATCGAAGCAGCTaGCACTTCCTTCTGCCAAACTTGTGTCTGATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCCYVQDFHRSS*HFLLPNLCLIL Trigger: CAGAATCAGACACAAGTTTGGCAGAAGGAAGTGTCAGCTGCTTCGATGAAAGTCTTGGACATAACAGCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | TCCAGTTTCAAAGATTTCTTTACATCGCCCTTAAGTTaGTCATTGCAACTGCTGGCCTCGTCATCACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSFKDFFTSPLS*SLQLLASSSLL Trigger: CAAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGGCGATGTAAAGAAATCTTTGAAACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | GTCCAGTTTCAAAGATTTCTTTACATCGCCCTTAAGTaGGTCATTGCAACTGCTGGCCTCGTCATCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQFQRFLYIALK*VIATAGLVITL Trigger: AAGAGTGATGACGAGGCCAGCAGTTGCAATGACCAACTTAAGGGCGATGTAAAGAAATCTTTGAAACTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | TATGCATCAATCATTCGGATCGTGTCGTTGATTTGTAGGGCTTCGTaGTACTTCCTCAAATGTTCTGCACAGACGCGATCTTTGCGATTT | + |
|
Preference number: 6 (lower is better) Translates to: YASIIRIVSLICRAS*YFLKCSAQTRSLRF Trigger: AAATCGCAAAGATCGCGTCTGTGCAGAACATTTGAGGAAGTACAACGAAGCCCTACAAATCAACGACACGATCCGAATGATTGATGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | CTGGTGTTACCACAGGTGTTGATCTTTTTAAGAATCTaGTCTTTGGTTTCTGCAGACAGAAAGATGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVLPQVLIFLRI*SLVSADRKMRW Trigger: CCACCTCATCTTTCTGTCTGCAGAAACCAAAGAGCAGATTCTTAAAAAGATCAACACCTGTGGTAACACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | TTCCTTATTTTAAGACAAGGCAAATCTAAACCTTTGTaGACCATCATTGTTCCCCAAGCCTGGCCACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLILRQGKSKPL*TIIVPQAWPHL Trigger: CAAGTGTGGCCAGGCTTGGGGAACAATGATGGTGCACAAAGGTTTAGATTTGCCTTGTCTTAAAATAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | CCTGTTAGTTCTTGGAATAGTGCATCATTTCCAGTTTaGCGCAGAACATCCAGGAAGGTAGAAAACCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PVSSWNSASFPV*RRTSRKVENQF Trigger: AAACTGGTTTTCTACCTTCCTGGATGTTCTGCGCCAAACTGGAAATGATGCACTATTCCAAGAACTAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | GGGTTGAACTCTTTTCGGAAAAGTTGTTCTGCTAACATTACCTTATaGACAAGAACGATAACCTTCCCGGATTCAGATGCCTGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLNSFRKSCSANITL*TRTITFPDSDACFF Trigger: GAAGAAGCAGGCATCTGAATCCGGGAAGGTTATCGTTCTTGTCAATAAGGTAATGTTAGCAGAACAACTTTTCCGAAAAGAGTTCAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS GCA 72 bp | TGTTTTCTCCCGAGCAGACCAGCATGCTACAATTTTTaGAGAGAAGTGTTATTAACGATGGATTGTCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CFLPSRPACYNF*REVLLTMDCRC Trigger: ACAACGACAATCCATCGTTAATAACACTTCTCTGCAAAAATTGTAGCATGCTGGTCTGCTCGGGAGAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS TCA 72 bp | CATTGTTTCTCAGCTTCTGCTTCAAATATCGTCTCATaGTGTTGTTATAGACTGCCTCCTTGTTGGTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HCFSASASNIVS*CCYRLPPCWCD Trigger: ATCACACCAACAAGGAGGCAGTCTATAACAACATCATGAGACGATATTTGAAGCAGAAGCTGAGAAACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | TCTTTTCGGAAAAGTTGTTCTGCTAACATTACCTTATaGACAAGAACGATAACCTTCCCGGATTCAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFRKSCSANITL*TRTITFPDSDA Trigger: GGCATCTGAATCCGGGAAGGTTATCGTTCTTGTCAATAAGGTAATGTTAGCAGAACAACTTTTCCGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CCA 72 bp | TTCTCTGGTGTCATCAGCAATCACAAATTTCTTGCATaGTTCCTTTATTTGGTGTTTGAGTTGACCAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: FSGVISNHKFLA*FLYLVFELTKI Trigger: AATCTTGGTCAACTCAAACACCAAATAAAGGAACCATGCAAGAAATTTGTGATTGCTGATGACACCAGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | TCTGGTGTCATCAGCAATCACAAATTTCTTGCATGGTTCCTTTATTaGGTGTTTGAGTTGACCAAGATTCTCTTTCACTGTTTTAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGVISNHKFLAWFLY*VFELTKILFHCFNG Trigger: ACCATTAAAACAGTGAAAGAGAATCTTGGTCAACTCAAACACCAAATAAAGGAACCATGCAAGAAATTTGTGATTGCTGATGACACCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | CTGCAATTCCAAAATCTTATGTGCATACTCCTCTGGTTTCATGTTTaGAACACGGTTAATAGCTTTATACATCATCTTCTCTCGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LQFQNLMCILLWFHV*NTVNSFIHHLLSEI Trigger: GATTTCCGAGAGAAGATGATGTATAAAGCTATTAACCGTGTTCAAAACATGAAACCAGAGGAGTATGCACATAAGATTTTGGAATTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | CTTGCAGATAATCTCTCCATTGGTCTGATAATCAGCAAATTTCTTTaGCAGTGCTTTGTTTTCTCTTACAATGTAGAGTCCCTTGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: LADNLSIGLIISKFL*QCFVFSYNVESLEF Trigger: GAATTCAAGGGACTCTACATTGTAAGAGAAAACAAAGCACTGCAAAAGAAATTTGCTGATTATCAGACCAATGGAGAGATTATCTGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 90 bp | AGCAATCACAAATTTCTTGCATGGTTCCTTTATTTGGTGTTTGAGTaGACCAAGATTCTCTTTCACTGTTTTAATGGTAAAGGCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SNHKFLAWFLYLVFE*TKILFHCFNGKGIK Trigger: CTTGATGCCTTTACCATTAAAACAGTGAAAGAGAATCTTGGTCAACTCAAACACCAAATAAAGGAACCATGCAAGAAATTTGTGATTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | CAAAATCTTATGTGCATACTCCTCTGGTTTCATGTTTaGAACACGGTTAATAGCTTTATACATCATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QNLMCILLWFHV*NTVNSFIHHLL Trigger: GAGAAGATGATGTATAAAGCTATTAACCGTGTTCAAAACATGAAACCAGAGGAGTATGCACATAAGATTTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||
| CDS CAA 72 bp | CTACAATTTTTGCAGAGAAGTGTTATTAACGATGGATaGTCGTTGTATTGCTTTGCAATGCTTCTTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LQFLQRSVINDG*SLYCFAMLLLT Trigger: AGTCAAAAGAAGCATTGCAAAGCAATACAACGACAATCCATCGTTAATAACACTTCTCTGCAAAAATTGTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028259.12 ENSMUST00000112459.4 |
||