Pregenerated sensors for IFI47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078920Ensembl transcript IDs: ENSMUST00000046704.7, ENSMUST00000109202.3, ENSMUST00000213728.2, ENSMUST00000214804.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTAGGGAAGAGCTGGCCTaGGAGTTTGGTGGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GTNGSETGYLLTQRQVVCREELA*EFGGRT Trigger: TGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCT...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTAGCTTAGGGAAGAGCTaGCCTGGGAGTTTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGSLGKS*PGSLVE Trigger: TTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCT...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTTGGGATACACTTCTGTaGAGCTTAGGGAAGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: IRNRLSLNTEAGGMLLLTWDTLL*SLGKSW Trigger: CCAGCTCTTCCCTAAGCTCCACAGAAGTGTATCCCA...AGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTAATGGACTTCCTTCATaGGATACACTTCTGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GTNGSETGYLLTQRQVVCNGLPS*DTLLWS Trigger: GCTCCACAGAAGTGTATCCCATGAAGGAAGTCCATT...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTGACAACCAACCCCATTaGCAATTTGGACACACAATT | + |
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Preference number: 2 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGDNQPH*QFGHTI Trigger: AATTGTGTGTCCAAATTGGCAATGGGGTTGGTTGTC...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTACCCCATTGCCAATTTaGACACACAATTTGAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: GTNGSETGYLLTQRQVVCTPLPI*THNLKS Trigger: GGATTTCAAATTGTGTGTCCAAATTGGCAATGGGGT...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATCAAGAATAATTGGGATACACTTCTGTaGAGCTTAGGGAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLNTEAGGMLLLTIIKNNWDTLL*SLGKSW Trigger: CCAGCTCTTCCCTAAGCTCCACAGAAGTGTATCCCA...ATTATTCTTGATAATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTAATGGACTTCCTTCATaGGATACACTTCTGTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RNRLSLNTEAGGMLLLTINGLPS*DTLLWS Trigger: GCTCCACAGAAGTGTATCCCATGAAGGAAGTCCATT...AATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTACCCCATTGCCAATTTaGACACACAATTTGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGTPLPI*THNLKS Trigger: GGATTTCAAATTGTGTGTCCAAATTGGCAATGGGGT...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATCAAGAATAATACCCCATTGCCAATTTaGACACACAATTTGAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: SLNTEAGGMLLLTIIKNNTPLPI*THNLKS Trigger: GGATTTCAAATTGTGTGTCCAAATTGGCAATGGGGT...ATTATTCTTGATAATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR CCA 72 bp | TCATGGGATACACTTCTGTGGAGCTTAGGGAAGAGCTaGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCA | + |
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Preference number: 3 (lower is better) Translates to: SWDTLLWSLGKS*PGSLVEGQPTP Trigger: TGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGTATCCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTaGGACACACAATTTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: TSVELREELAWEFGGRTTNPIAN*DTQFEI Trigger: GATTTCAAATTGTGTGTCCAAATTGGCAATGGGGTT...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CAA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTAGCTGGCCTGGGAGTTaGGTGGAAGGACAACCAACC | + |
|
Preference number: 3 (lower is better) Translates to: GTNGSETGYLLTQRQVVCSWPGS*VEGQPT Trigger: GGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCT...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTAACCCCATTGCCAATTaGGACACACAATTTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: RNRLSLNTEAGGMLLLTINPIAN*DTQFEI Trigger: GATTTCAAATTGTGTGTCCAAATTGGCAATGGGGTT...AATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCACCAGTGAGGGTTTCTaGAGAGAGCATGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVELREELAWEFGGRTTTSEGF*REHASC Trigger: GCAGGAGGCATGCTCTCTCCAGAAACCCTCACTGGT...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATCCTGGAGGGCTTTGTaGATACCAGTGAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSLGKSWPGSLVEGQPTPSWRAL*IPVRVS Trigger: AGAAACCCTCACTGGTATTCACAAAGCCCTCCAGGA...TGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAAACCAGTGAGGGTTTCTaGAGAGAGCATGCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQTSEGF*REHASC Trigger: GCAGGAGGCATGCTCTCTCCAGAAACCCTCACTGGT...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACGAGTCTCCTCCAGCTTaGGGAAATCAAACGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SVELREELAWEFGGRTTNESPPA*GNQTHP Trigger: TGGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTC...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| 3UTR CAA 72 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTaGGTGGAAGGACAACCAACCCCATTGCCAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWSLGKSWPGS*VEGQPTPLPIW Trigger: CCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCATCCTGGAGGGCTTTGTaGATACCAGTGAGGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLWSLGKSWPGSLVEGQPSWRAL*IPVRVS Trigger: AGAAACCCTCACTGGTATTCACAAAGCCCTCCAGGA...TGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCTGCCTCCTGCCTTACTaGTTAATGCAGAGTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: TSVELREELAWEFGGRTTCLLPY*LMQSTE Trigger: CTCAGTACTCTGCATTAATCAGTAAGGCAGGAGGCA...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTCTTTGTGAATACCAGTaGGGGTTTCTGGAGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GKSWPGSLVEGQPTPLPILCEYQ*GFLERA Trigger: TGCTCTCTCCAGAAACCCTCACTGGTATTCACAAAG...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR GCA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCGATGTCTGCCAAGGGTaGGCCCAATTTTTCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TSVELREELAWEFGGRTTDVCQG*AQFFSN Trigger: ATTGCTGAAAAATTGGGCGCACCCTTGGCAGACATC...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCACCCAGATCCAAGTTaGAGATCAGGAAGATGCATG | + |
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Preference number: 4 (lower is better) Translates to: SVELREELAWEFGGRTTNHPDPS*RSGRCM Trigger: CATGCATCTTCCTGATCTCCAACTTGGATCTGGGTG...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTCACCCAGATCCAAGTTaGAGATCAGGAAGATGCATG | + |
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Preference number: 4 (lower is better) Translates to: GKSWPGSLVEGQPTPLPIHPDPS*RSGRCM Trigger: CATGCATCTTCCTGATCTCCAACTTGGATCTGGGTG...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGGACACAAGCATCCGAGATATTaGGCAAGAGCAGGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: AGLGVWWKDNQPHCQFGHKHPRY*ARAGQT Trigger: TGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTT...GTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAAGCATCCGAGATATTaGGCAAGAGCAGGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: TSVELREELAWEFGGRTTKHPRY*ARAGQT Trigger: TGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTT...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | AGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGTTGGAAACTATTTTCTaGAGCACCCTTCAGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLGKSWPGSLVEGQPTPLLETIF*STLQEG Trigger: GCCTTCCTGAAGGGTGCTTCAGAAAATAGTTTCCAA...CAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGTGCCTCCTGCCTTACTaGTTAATGCAGAGTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: EELAWEFGGRTTNPIANLCLLPY*LMQSTE Trigger: CTCAGTACTCTGCATTAATCAGTAAGGCAGGAGGCA...CAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACTTTGTGAATACCAGTaGGGGTTTCTGGAGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQLCEYQ*GFLERA Trigger: TGCTCTCTCCAGAAACCCTCACTGGTATTCACAAAG...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGGACACGGACTTTCTCCTTCTTaGAAGCTATGGGTTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AGLGVWWKDNQPHCQFGHGLSPS*KLWVWL Trigger: AAGCCAAACCCATAGCTTTCAAGAAGGAGAAAGTCC...GTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | TACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACACACCCAGATCCAAGTTaGAGATCAGGAAGATGCATG | + |
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Preference number: 4 (lower is better) Translates to: YTSVELREELAWEFGGRTHPDPS*RSGRCM Trigger: CATGCATCTTCCTGATCTCCAACTTGGATCTGGGTG...TGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAAAAGCATCCGAGATATTaGGCAAGAGCAGGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQKHPRY*ARAGQT Trigger: TGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTT...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGTTGGAAACTATTTTCTaGAGCACCCTTCAGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: EELAWEFGGRTTNPIANLLETIF*STLQEG Trigger: GCCTTCCTGAAGGGTGCTTCAGAAAATAGTTTCCAA...CAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTATTAATGCAGAGTACTaGGGCAGAAACTCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: GKSWPGSLVEGQPTPLPIINAEY*GRNSLA Trigger: AGCTAAGGAGTTTCTGCCTCAGTACTCTGCATTAAT...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGGACACGCACTAATTGCTTTCTaGATCTGGATCATGACATCA | + |
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Preference number: 4 (lower is better) Translates to: AGLGVWWKDNQPHCQFGHALIAF*IWIMTS Trigger: TGATGTCATGATCCAGATTCAGAAAGCAATTAGTGC...GTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTGCACTAATTGCTTTCTaGATCTGGATCATGACATCA | + |
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Preference number: 4 (lower is better) Translates to: GKSWPGSLVEGQPTPLPIALIAF*IWIMTS Trigger: TGATGTCATGATCCAGATTCAGAAAGCAATTAGTGC...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCACTCTGCAGCACTAATTaGTTTCTGAATCTGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: LLWSLGKSWPGSLVEGQPLCSTN*FLNLDH Trigger: ATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAG...TGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR GCA 90 bp | AGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCTCTGCAGCACTAATTaGTTTCTGAATCTGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: SLGKSWPGSLVEGQPTPLLCSTN*FLNLDH Trigger: ATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAG...CAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAGTTTCTTTAGCTCAATaGAAGCATCCGAGATATTGG | + |
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Preference number: 4 (lower is better) Translates to: LLWSLGKSWPGSLVEGQPVSLAQ*KHPRYW Trigger: CCAATATCTCGGATGCTTCCATTGAGCTAAAGAAAC...TGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCGTTTCTTTAGCTCAATaGAAGCATCCGAGATATTGG | + |
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Preference number: 4 (lower is better) Translates to: TSVELREELAWEFGGRTTVSLAQ*KHPRYW Trigger: CCAATATCTCGGATGCTTCCATTGAGCTAAAGAAAC...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR TCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAAGCACTAATTGCTTTCTaGATCTGGATCATGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQALIAF*IWIMTS Trigger: TGATGTCATGATCCAGATTCAGAAAGCAATTAGTGC...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACTCTGCAGCACTAATTaGTTTCTGAATCTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQLCSTN*FLNLDH Trigger: ATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAG...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCACTTTGGGATATTTTaGATGTTGATAGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVELREELAWEFGGRTTNHFGIF*MLIGGF Trigger: AAAACCCCCTATCAACATCCAAAATATCCCAAAGTG...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACACTTTGGGATATTTTaGATGTTGATAGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLWSLGKSWPGSLVEGQHFGIF*MLIGGF Trigger: AAAACCCCCTATCAACATCCAAAATATCCCAAAGTG...TTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | TACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACACACTTTGGGATATTTTaGATGTTGATAGGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YTSVELREELAWEFGGRTHFGIF*MLIGGF Trigger: AAAACCCCCTATCAACATCCAAAATATCCCAAAGTG...TGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | TACACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACACCCAGAAGATCACTTTaGGATATTTTGGATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTSVELREELAWEFGGRTPRRSL*DILDVD Trigger: ATCAACATCCAAAATATCCCAAAGTGATCTTCTGGG...TGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| 3UTR CAA 72 bp | TGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATaGCCAATTTGGACACACAATTTGAAATCCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WPGSLVEGQPTP*PIWTHNLKSIH Trigger: GTGAATGGATTTCAAATTGTGTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTGAGTCTCCTCCAGCTTaGGGAAATCAAACGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNRLSLNTEAGGMLLLTIESPPA*GNQTHP Trigger: TGGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTC...AATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTCTTTGTGAATACCAGTaGGGGTTTCTGGAGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGLCEYQ*GFLERA Trigger: TGCTCTCTCCAGAAACCCTCACTGGTATTCACAAAG...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTGGACTTTCTCCTTCTTaGAAGCTATGGGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTNGSETGYLLTQRQVVCGLSPS*KLWVWL Trigger: AAGCCAAACCCATAGCTTTCAAGAAGGAGAAAGTCC...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTGATGTCTGCCAAGGGTaGGCCCAATTTTTCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRNRLSLNTEAGGMLLLTDVCQG*AQFFSN Trigger: ATTGCTGAAAAATTGGGCGCACCCTTGGCAGACATC...AGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTGGACTTTCTCCTTCTTaGAAGCTATGGGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRNRLSLNTEAGGMLLLTGLSPS*KLWVWL Trigger: AAGCCAAACCCATAGCTTTCAAGAAGGAGAAAGTCC...AGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATCAAGAATAATTCCTGGAGGGCTTTGTaGATACCAGTGAGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLNTEAGGMLLLTIIKNNSWRAL*IPVRVS Trigger: AGAAACCCTCACTGGTATTCACAAAGCCCTCCAGGA...ATTATTCTTGATAATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATTAATGCAGAGTACTaGGGCAGAAACTCCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNRLSLNTEAGGMLLLTIINAEY*GRNSLA Trigger: AGCTAAGGAGTTTCTGCCTCAGTACTCTGCATTAAT...AATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATCAAGAATAATTGCCTCCTGCCTTACTaGTTAATGCAGAGTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLNTEAGGMLLLTIIKNNCLLPY*LMQSTE Trigger: CTCAGTACTCTGCATTAATCAGTAAGGCAGGAGGCA...ATTATTCTTGATAATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTATCAAGAATAATTTGGAAACTATTTTCTaGAGCACCCTTCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNTEAGGMLLLTIIKNNLETIF*STLQEG Trigger: GCCTTCCTGAAGGGTGCTTCAGAAAATAGTTTCCAA...ATTATTCTTGATAATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTCCCAGAAGATCACTTTaGGATATTTTGGATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGPRRSL*DILDVD Trigger: ATCAACATCCAAAATATCCCAAAGTGATCTTCTGGG...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCAAGAGTCTCCTCCAGCTaGGGGAAATCAAACGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: WSLGKSWPGSLVEGQPTPRVSSS*GKSNAP Trigger: GGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTCT...TGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACGCCAGGAGAGCATCATaGAGGCTGAAGCGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVELREELAWEFGGRTTNARRAS*RLKREE Trigger: TTCTTCCCGCTTCAGCCTCAATGATGCTCTCCTGGC...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGAGAGTCTCCTCCAGCTaGGGGAAATCAAACGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGKSWPGSLVEGQPTPLRVSSS*GKSNAP Trigger: GGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTCT...CAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTCACTTAAGTTCCCCCTaGATGTCTGCCAAGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GKSWPGSLVEGQPTPLPIHLSSP*MSAKGA Trigger: CGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTG...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCACTTAAGTTCCCCCTaGATGTCTGCCAAGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVELREELAWEFGGRTTNHLSSP*MSAKGA Trigger: CGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTG...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGGACACCACTTAAGTTCCCCCTaGATGTCTGCCAAGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGLGVWWKDNQPHCQFGHHLSSP*MSAKGA Trigger: CGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTG...GTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS CCA 90 bp | GACGCTTGTGCCCAGGGAGCTCCTTTAGCAGAGTCTCCTCCAGCTTaGGGAAATCAAACGCACCCAGATCCAAGTTGGAGATCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DACAQGAPLAESPPA*GNQTHPDPSWRSGR Trigger: TCTTCCTGATCTCCAACTTGGATCTGGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTCTGCTAAAGGAGCTCCCTGGGCACAAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCGAAGCATCCGAGATATaGGGCAAGAGCAGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSVELREELAWEFGGRTTEASEI*GKSRAN Trigger: GTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTC...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAGAAGCATCCGAGATATaGGGCAAGAGCAGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLWSLGKSWPGSLVEGQPEASEI*GKSRAN Trigger: GTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTC...TGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS TCA 90 bp | TCAATGGAAGCATCCGAGATATTGGGCAAGAGCAGGGCAAACATATaGCGCTTGTGCCCAGGGAGCTCCTTTAGCAGAGTCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SMEASEILGKSRANI*RLCPGSSFSRVSSS Trigger: GCTGGAGGAGACTCTGCTAAAGGAGCTCCCTGGGCACAAGCGTCATATGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTCCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS GCA 90 bp | AGCCCTCGAAGGGCATTTATAAAACTGGACTTGCCAGTCCCAGACTaGCCGATCACAGCCACCTCCAGGATAGCATTCTCTGCAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAFIKLDLPVPD*PITATSRIAFSAAL Trigger: TAGTGCTGCAGAGAATGCTATCCTGGAGGTGGCTGTGATCGGGCAGTCTGGGACTGGCAAGTCCAGTTTTATAAATGCCCTTCGAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTGGACACGCACCCAGATCCAAGTaGGAGATCAGGAAGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLGVWWKDNQPHCQFGHAPRSK*EIRKMH Trigger: ATGCATCTTCCTGATCTCCAACTTGGATCTGGGTGC...GTGTCCAAATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACGCACCCAGATCCAAGTaGGAGATCAGGAAGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVELREELAWEFGGRTTNAPRSK*EIRKMH Trigger: ATGCATCTTCCTGATCTCCAACTTGGATCTGGGTGC...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCAAGGACTTTCTCCTTCTaGAAAGCTATGGGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSLGKSWPGSLVEGQPTPRTFSF*KAMGLA Trigger: AGCCAAACCCATAGCTTTCAAGAAGGAGAAAGTCCT...TGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCACTTCAAGCACTGTTCTaGTTCAGGCAAATCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSLGKSWPGSLVEGQPTPLQALF*FRQIKA Trigger: GGCTTTGATTTGCCTGAACAAGAACAGTGCTTGAAG...TGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCTCAGTCACCCCAGTTTaGATGAGATTAGTCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TSVELREELAWEFGGRTTSVTPV*MRLVTQ Trigger: CTGTGTGACTAATCTCATCAAAACTGGGGTGACTGA...GGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCTTCAAGCACTGTTCTaGTTCAGGCAAATCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVELREELAWEFGGRTTNLQALF*FRQIKA Trigger: GGCTTTGATTTGCCTGAACAAGAACAGTGCTTGAAG...GTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS TCA 90 bp | ATCTGGATCATGACATCAGAGAGATTTCCCTCCTGGAGGGCTTTGTaGATACCAGTGAGGGTTTCTGGAGAGAGCATGCCTCCTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: IWIMTSERFPSWRAL*IPVRVSGESMPPAL Trigger: TAAGGCAGGAGGCATGCTCTCTCCAGAAACCCTCACTGGTATTCACAAAGCCCTCCAGGAGGGAAATCTCTCTGATGTCATGATCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
||
| CDS GCA 90 bp | AGTCCCAGACTGCCCGATCACAGCCACCTCCAGGATAGCATTCTCTaGAGCACTAATTGCTTTCTGAATCTGGATCATGACATCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRLPDHSHLQDSIL*STNCFLNLDHDIRE Trigger: CTCTCTGATGTCATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAGAATGCTATCCTGGAGGTGGCTGTGATCGGGCAGTCTGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
||
| CDS TCA 90 bp | ACAGCCACCTCCAGGATAGCATTCTCTGCAGCACTAATTGCTTTCTaGATCTGGATCATGACATCAGAGAGATTTCCCTCCTGGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TATSRIAFSAALIAF*IWIMTSERFPSWRA Trigger: AGCCCTCCAGGAGGGAAATCTCTCTGATGTCATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAGAATGCTATCCTGGAGGTGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGTGGAGCTTAGGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCATCACTTTGGGATATTTaGGATGTTGATAGGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLWSLGKSWPGSLVEGQPSLWDI*DVDRGF Trigger: AAACCCCCTATCAACATCCAAAATATCCCAAAGTGA...TGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCCTAAGCTCCACAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGAGCTGGCCTGGGAGTTTGGTGGAAGGACAACCAACCCCATTGCCAATTTCACTTTGGGATATTTaGGATGTTGATAGGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKSWPGSLVEGQPTPLPISLWDI*DVDRGF Trigger: AAACCCCCTATCAACATCCAAAATATCCCAAAGTGA...AATTGGCAATGGGGTTGGTTGTCCTTCCACCAAACTCCCAGGCCAGCTCTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS CCA 90 bp | CCTCCAGCCAGATCTTCTCCCGAAGAAAATGTTTCTTTAGCTCAATaGAAGCATCCGAGATATTGGGCAAGAGCAGGGCAAACATATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPARSSPEENVSLAQ*KHPRYWARAGQTYD Trigger: GTCATATGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTCCATTGAGCTAAAGAAACATTTTCTTCGGGAGAAGATCTGGCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
||
| CDS-3UTR CAA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTGCCAGGAGAGCATCATaGAGGCTGAAGCGGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGARRAS*RLKREE Trigger: TTCTTCCCGCTTCAGCCTCAATGATGCTCTCCTGGC...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CAA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTGAAGCATCCGAGATATaGGGCAAGAGCAGGGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GTNGSETGYLLTQRQVVCEASEI*GKSRAN Trigger: GTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTC...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS GCA 90 bp | TACAAGGGACCAGAAATCCAAGCACTTAAGTTCCCCCTTGATGTCTaGCAAGGGTGCGCCCAATTTTTCAGCAATCTCTTTAATCGATTG | + |
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Preference number: 5 (lower is better) Translates to: YKGPEIQALKFPLDV*QGCAQFFSNLFNRL Trigger: CAATCGATTAAAGAGATTGCTGAAAAATTGGGCGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTGCTTGGATTTCTGGTCCCTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CAA 90 bp | GGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTGCACCCAGATCCAAGTaGGAGATCAGGAAGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: GTNGSETGYLLTQRQVVCAPRSK*EIRKMH Trigger: ATGCATCTTCCTGATCTCCAACTTGGATCTGGGTGC...ACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CAA 90 bp | TATTGGTACAAATGGATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTTCAGTCACCCCAGTTTaGATGAGATTAGTCACACAG | + |
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Preference number: 5 (lower is better) Translates to: YWYKWIRNRLSLNTEAGGSVTPV*MRLVTQ Trigger: CTGTGTGACTAATCTCATCAAAACTGGGGTGACTGA...ACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGATCCATTTGTACCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTCTTCAAGCACTGTTCTaGTTCAGGCAAATCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: IRNRLSLNTEAGGMLLLTLQALF*FRQIKA Trigger: GGCTTTGATTTGCCTGAACAAGAACAGTGCTTGAAG...AGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS-3UTR CAA 90 bp | AGAAACAGGTTATCTCTTAACACAGAGGCAGGTGGTATGTTATTGCTGACTATTTCAGTCACCCCAGTTTaGATGAGATTAGTCACACAG | + |
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Preference number: 5 (lower is better) Translates to: RNRLSLNTEAGGMLLLTISVTPV*MRLVTQ Trigger: CTGTGTGACTAATCTCATCAAAACTGGGGTGACTGA...AATAGTCAGCAATAACATACCACCTGCCTCTGTGTTAAGAGATAACCTGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS CCA 72 bp | GCCCAGGGAGCTCCTTTAGCAGAGTCTCCTCCAGCTTaGGGAAATCAAACGCACCCAGATCCAAGTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: AQGAPLAESPPA*GNQTHPDPSWR Trigger: TCTCCAACTTGGATCTGGGTGCGTTTGATTTCCCCAAGCTGGAGGAGACTCTGCTAAAGGAGCTCCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS TCA 72 bp | GCATCCGAGATATTGGGCAAGAGCAGGGCAAACATATaGCGCTTGTGCCCAGGGAGCTCCTTTAGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASEILGKSRANI*RLCPGSSFSRV Trigger: GACTCTGCTAAAGGAGCTCCCTGGGCACAAGCGTCATATGTTTGCCCTGCTCTTGCCCAATATCTCGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS CCA 72 bp | ATCCCACTTGGTCTAGATAAGCGTCTGCGTGGAAATTaGGTGTCCCAGTCCCAGGCAGGTCCCAGAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: IPLGLDKRLRGN*VSQSQAGPRRS Trigger: TGATCTTCTGGGACCTGCCTGGGACTGGGACACCCAATTTCCACGCAGACGCTTATCTAGACCAAGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
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| CDS TCA 72 bp | AGAGATTTCCCTCCTGGAGGGCTTTGTGAATACCAGTaGGGGTTTCTGGAGAGAGCATGCCTCCTGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: RDFPPGGLCEYQ*GFLERACLLPY Trigger: GTAAGGCAGGAGGCATGCTCTCTCCAGAAACCCTCACTGGTATTCACAAAGCCCTCCAGGAGGGAAATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
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| CDS CAA 72 bp | ACAAGGGACCAGAAATCCAAGCACTTAAGTTCCCCCTaGATGTCTGCCAAGGGTGCGCCCAATTTTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TRDQKSKHLSSP*MSAKGAPNFSA Trigger: TGCTGAAAAATTGGGCGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTGCTTGGATTTCTGGTCCCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS GCA 72 bp | CCAGAAATCCAAGCACTTAAGTTCCCCCTTGATGTCTaGCAAGGGTGCGCCCAATTTTTCAGCAATCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PEIQALKFPLDV*QGCAQFFSNLF Trigger: AAAGAGATTGCTGAAAAATTGGGCGCACCCTTGGCAGACATCAAGGGGGAACTTAAGTGCTTGGATTTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS CCA 72 bp | AATGTTTCTTTAGCTCAATGGAAGCATCCGAGATATTaGGCAAGAGCAGGGCAAACATATGACGCTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: NVSLAQWKHPRY*ARAGQTYDACA Trigger: GGCACAAGCGTCATATGTTTGCCCTGCTCTTGCCCAATATCTCGGATGCTTCCATTGAGCTAAAGAAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS TCA 72 bp | TCCAGGATAGCATTCTCTGCAGCACTAATTGCTTTCTaGATCTGGATCATGACATCAGAGAGATTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRIAFSAALIAF*IWIMTSERFPS Trigger: GGAGGGAAATCTCTCTGATGTCATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAGAATGCTATCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
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| CDS GCA 72 bp | AGCCACCTCCAGGATAGCATTCTCTGCAGCACTAATTaGTTTCTGAATCTGGATCATGACATCAGAGAGATT | + |
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Preference number: 6 (lower is better) Translates to: SHLQDSILCSTN*FLNLDHDIREI Trigger: AATCTCTCTGATGTCATGATCCAGATTCAGAAAGCAATTAGTGCTGCAGAGAATGCTATCCTGGAGGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
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| CDS CAA 72 bp | TTTCACAGCACAAAAAGCTTCAGCAGCACTCGTAGCTaGCGCTATTATGCTGTTATCCTTTACAAGGGACCA | + |
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Preference number: 6 (lower is better) Translates to: FHSTKSFSSTRS*RYYAVILYKGP Trigger: TGGTCCCTTGTAAAGGATAACAGCATAATAGCGCAAGCTACGAGTGCTGCTGAAGCTTTTTGTGCTGTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS TCA 72 bp | AGCATGCCTCCTGCCTTACTGATTAATGCAGAGTACTaGGGCAGAAACTCCTTAGCTAATTGTTGGAAACTA | + |
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Preference number: 6 (lower is better) Translates to: SMPPALLINAEY*GRNSLANCWKL Trigger: TAGTTTCCAACAATTAGCTAAGGAGTTTCTGCCTCAGTACTCTGCATTAATCAGTAAGGCAGGAGGCATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 ENSMUST00000214804.2 |
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| CDS CAA 72 bp | GGGTGCGCCCAATTTTTCAGCAATCTCTTTAATCGATaGATCATCCAAGCCAAAATAGCTTCGGTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GCAQFFSNLFNR*IIQAKIASVIL Trigger: AAGGATTACCGAAGCTATTTTGGCTTGGATGATCAATCGATTAAAGAGATTGCTGAAAAATTGGGCGCACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS CAA 72 bp | GCCAAAATAGCTTCGGTAATCCTTCAAGCACTGTTCTaGTTCAGGCAAATCAAAGCCCTTAAAGAAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: AKIASVILQALF*FRQIKALKESH Trigger: ATGACTTTCTTTAAGGGCTTTGATTTGCCTGAACAAGAACAGTGCTTGAAGGATTACCGAAGCTATTTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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| CDS TCA 72 bp | AGTAGTCTCGAATCTGCTGAAGGACTTTCTCCTTCTTaGAAGCTATGGGTTTGGCTTTCTGTTCATTATATA | + |
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Preference number: 6 (lower is better) Translates to: SSLESAEGLSPS*KLWVWLSVHYI Trigger: TATATAATGAACAGAAAGCCAAACCCATAGCTTTCAAGAAGGAGAAAGTCCTTCAGCAGATTCGAGACTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046704.7 ENSMUST00000109202.3 ENSMUST00000213728.2 |
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