Pregenerated sensors for IFI44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028037Ensembl transcript IDs: ENSMUST00000029671.9
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAACGGATCTTCCAAGACTaGTTTGAGGAAGATATCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLNEAEINEVGGEGDKSERIFQD*FEEDIR Trigger: CCTGATATCTTCCTCAAATCAGTCTTGGAAGATCCG...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| 3UTR-3UTR TCA 90 bp | AATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCACTGTCTACACATaGTGGAACTTCTTCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: NTFTFVCECVCVCVCVCVRTVYT*WNFFQL Trigger: TAGCTGGAAGAAGTTCCATCATGTGTAGACAGTGCG...CACACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| 3UTR-3UTR TCA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAACTTCCAAGACTGATTTaGGGAAGATATCAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NEAEINEVGGEGDKSEAKLPRLI*GRYQEG Trigger: TCCTTCCTGATATCTTCCTCAAATCAGTCTTGGAAG...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGTCTATAATCAGAGGTGATAAATATCTACCTAGGAGGAACTACACTAAAATGATGATGGAGGAATaGATCCAGAAAACGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: SESIIRGDKYLPRRNYTKMMMEE*IQKTHC Trigger: ACAGTGCGTTTTCTGGATTCATTCCTCCATCATCAT...TTTAGTGTAGTTCCTCCTAGGTAGATATTTATCACCTCTGATTATAGACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTCCAAGACTGATTaGAGGAAGATATCAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QNTFTFVCECVCVCVCVCSSKTD*RKISGR Trigger: CCTTCCTGATATCTTCCTCAAATCAGTCTTGGAAGA...ACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR TCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAACTCACCCAGCCCCAGTaGGTCACACAGAATAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNEAEINEVGGEGDKSELTQPQ*VTQNKW Trigger: CCATTTATTCTGTGTGACTCACTGGGGCTGGGTGAG...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAACATACATCATCTGTGTaGAAGCCGGCATTCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TLNEAEINEVGGEGDKSEHTSSV*KPAFSP Trigger: GGGTGAGAATGCCGGCTTGCACACAGATGATGTATG...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | GGAACTACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAAAGACTCCATGGAATaGCTCCAGCTTGGACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTTLNEAEINEVGGEGDKKDSME*LQLGLH Trigger: GTGAAGTCCAAGCTGGAGGCATTCCATGGAGTCTTT...TTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGTAGTTCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| 3UTR CAA 72 bp | CAGGTAATCAACAGACCCAGACAAGAATTGGCCAAGTaGATGATACCGTCAAGCTCCGAGATAATCACTCTA | + |
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Preference number: 4 (lower is better) Translates to: QVINRPRQELAK*MIPSSSEIITL Trigger: TAGAGTGATTATCTCGGAGCTTGACGGTATCATCAACTTGGCCAATTCTTGTCTGGGTCTGTTGATTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR TCA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAACTCTTCGAATTTTCTTaGTCTTTGCCACCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NEAEINEVGGEGDKSEAKLFEFS*SLPPAQ Trigger: CTGAGCTGGTGGCAAAGATCAAGAAAATTCGAAGAG...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAAGGCACTTTTCTTGCTaGCATGTCAAACGAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLNEAEINEVGGEGDKSERHFSC*HVKRVL Trigger: GAGAACTCGTTTGACATGGCAGCAAGAAAAGTGCCT...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CCA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAATTCATGGAATCGAACTaGTATCTGTCAGGAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEAEINEVGGEGDKSEAKFMESN*YLSGVW Trigger: CCACACTCCTGACAGATACCAGTTCGATTCCATGAA...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CCA 90 bp | CAAAATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACACAGAATAAATaGCAGGGGGTCACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QNTFTFVCECVCVCVCVCVTQNK*QGVTVI Trigger: GATGACAGTGACCCCCTGCCATTTATTCTGTGTGAC...ACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAAAATTTTCTTGATCTTTaGCACCAGCTCAGAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: NEAEINEVGGEGDKSEAKNFLDL*HQLRRV Trigger: CACTCTTCTGAGCTGGTGGCAAAGATCAAGAAAATT...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CCA 90 bp | CAAAATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACATCTTTTCCCTaGAAGCCCTCTTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTFTFVCECVCVCVCVCETSFP*KPSFRY Trigger: GTACCTGAAAGAGGGCTTCCAGGGAAAAGATGTTTC...ACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CCA 90 bp | GGAACTACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAGAAAATCCAGTCTCTTaGAGTGCAAAAATGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GTTLNEAEINEVGGEGDKENPVS*SAKMVI Trigger: TATCACCATTTTTGCACTCCAAGAGACTGGATTTTC...TTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGTAGTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAAAGCCAAATGCAGAATaGCATGTTTTATCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLNEAEINEVGGEGDKSEKPNAE*HVLSSL Trigger: GAGACTTGATAAAACATGGCATTCTGCATTTGGCTT...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CCA 90 bp | AGTGAGTCTATAATCAGAGGTGATAAATATCTACCTAGGAGGAACTACACTAAAGGAATGCCTCCAGCTTaGACTTCACAGGACTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SESIIRGDKYLPRRNYTKGMPPA*TSQDYS Trigger: ACTATAGTCCTGTGAAGTCCAAGCTGGAGGCATTCC...TTTAGTGTAGTTCCTCCTAGGTAGATATTTATCACCTCTGATTATAGACTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAACCAGCTCAGAAGAGTaGATTTCAAAAGAATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLNEAEINEVGGEGDKSETSSEE*ISKELI Trigger: TATCAATTCTTTTGAAATGCACTCTTCTGAGCTGGT...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | AATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCCAAGAATTCATTTaGAGTATACAGGATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTFTFVCECVCVCVCVCVLQEFI*SIQDLL Trigger: AAGGAGATCCTGTATACTGCAAATGAATTCTTGGAG...CACACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR TCA 90 bp | CAAAATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGCTTCACACTCCTaGATAGGTATGACATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: QNTFTFVCECVCVCVCVCKASHS*IGMTLL Trigger: CAATAATGTCATACCTATTCAGGAGTGTGAAGCTTT...ACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR TCA 90 bp | AGTGAGTCTATAATCAGAGGTGATAAATATCTACCTAGGAGGAACTACACTAAATCGGATGGTTTGATGTaGTTGGTTTCATGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SESIIRGDKYLPRRNYTKSDGLM*LVSWNR Trigger: TCGATTCCATGAAACCAATCACATCAAACCATCCGA...TTTAGTGTAGTTCCTCCTAGGTAGATATTTATCACCTCTGATTATAGACTCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | AGTCCATTCCCAGTCCTTTCAGAATTAGCAGTAAATGAACATAATATAGCACTCTCCAGTCTCTTGGAGTaGAAAAATGGTGATAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPFPVLSELAVNEHNIALSSLLE*KNGDRN Trigger: GTTTCTATCACCATTTTTGCACTCCAAGAGACTGGA...GAGTGCTATATTATGTTCATTTACTGCTAATTCTGAAAGGACTGGGAATGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR GCA 90 bp | AGTGAGTCTATAATCAGAGGTGATAAATATCTACCTAGGAGGAACTACACTAAATATGTAACACAGCAATaGCTCTTGTCTTTCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SESIIRGDKYLPRRNYTKYVTQQ*LLSFFH Trigger: ATGAAAGAAAGACAAGAGGCATTGCTGTGTTACATA...TTTAGTGTAGTTCCTCCTAGGTAGATATTTATCACCTCTGATTATAGACTCACT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 90 bp | CCATACATCATCTGTGTGCAAGCCGGCATTCTCACCCAGCCCCAGTaGGTCACACAGAATAAATGGCAGGGGGTCACTGTCATCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PYIICVQAGILTQPQ*VTQNKWQGVTVILG Trigger: GCCAAGGATGACAGTGACCCCCTGCCATTTATTCTGTGTGACTCACTGGGGCTGGGTGAGAATGCCGGCTTGCACACAGATGATGTATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS GCA 90 bp | CTGTCAGGAGTGTGGCCCTTTAAGATGTGCCATACATCATCTGTGTaGAAGCCGGCATTCTCACCCAGCCCCAGTGAGTCACACAGAATA | + |
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Preference number: 5 (lower is better) Translates to: LSGVWPFKMCHTSSV*KPAFSPSPSESHRI Trigger: TATTCTGTGTGACTCACTGGGGCTGGGTGAGAATGCCGGCTTGCACACAGATGATGTATGGCACATCTTAAAGGGCCACACTCCTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 90 bp | CACCAAGATCTGGTGTGTGATGCTGCCCTTGAACACAGACTTGACTaGGTTCACAAAGCTAGACTTCCCAGCTCCAATAGGACCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQDLVCDAALEHRLD*VHKARLPSSNRTQQ Trigger: CTGCTGGGTCCTATTGGAGCTGGGAAGTCTAGCTTTGTGAACTCAGTCAAGTCTGTGTTCAAGGGCAGCATCACACACCAGATCTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAATGTGTGATGCTGCCCTaGAACACAGACTTGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: TLNEAEINEVGGEGDKSECVMLP*NTDLTE Trigger: CTCAGTCAAGTCTGTGTTCAAGGGCAGCATCACACA...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAAGGGTCACTGTCATCCTaGGCCTTGATGGAATATGTC | + |
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Preference number: 5 (lower is better) Translates to: NEAEINEVGGEGDKSEAKGSLSS*ALMEYV Trigger: GACATATTCCATCAAGGCCAAGGATGACAGTGACCC...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 90 bp | AATTCTGTCCTTCAGCAGTGGGTCATGGGTATAGTTCGGATGGTTTaGTGTGATTGGTTTCATGGAATCGAACTGGTATCTGTCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: NSVLQQWVMGIVRMV*CDWFHGIELVSVRS Trigger: ACTCCTGACAGATACCAGTTCGATTCCATGAAACCAATCACATCAAACCATCCGAACTATACCCATGACCCACTGCTGAAGGACAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | GGAACTACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAATATCATGGTAGGACCTaGATTCTCACATGTGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GTTLNEAEINEVGGEGDKYHGRT*ILTCAE Trigger: CTCTGCACATGTGAGAATCAAGGTCCTACCATGATA...TTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGTAGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAACTGTCATCCTTGGCCTaGATGGAATATGTCCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: TLNEAEINEVGGEGDKSELSSLA*MEYVLY Trigger: GTACAGGACATATTCCATCAAGGCCAAGGATGACAG...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | GGAACTACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAATCTCTTCGAATTTTCTaGATCTTTGCCACCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GTTLNEAEINEVGGEGDKSLRIF*IFATSS Trigger: TGAGCTGGTGGCAAAGATCAAGAAAATTCGAAGAGA...TTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGTAGTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | ACACTAAATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGTGAATCTGGTCCTTTaGCACATAGTGAAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: TLNEAEINEVGGEGDKSEVNLVL*HIVKIQ Trigger: CTGGATTTTCACTATGTGCAAAAGGACCAGATTCAC...TTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATTTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | AATGAAGCAGAAATAAATGAGGTCGGGGGTGAGGGAGACAAAAGTGAAGCTAAACCTCCAAGAATTCATTaGCAGTATACAGGATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NEAEINEVGGEGDKSEAKPPRIH*QYTGSP Trigger: AGGAGATCCTGTATACTGCAAATGAATTCTTGGAGG...TTTAGCTTCACTTTTGTCTCCCTCACCCCCGACCTCATTTATTTCTGCTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS-3UTR CAA 90 bp | CAAAATACTTTTACATTTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACAGCAATGCCTCTaGTCTTTCTTTCATCCAACA | + |
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Preference number: 5 (lower is better) Translates to: QNTFTFVCECVCVCVCVCTQQCL*SFFHPT Trigger: TGTTGGATGAAAGAAAGACAAGAGGCATTGCTGTGT...ACACACACACACACACACACACACACACTCACACACAAATGTAAAAGTATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 90 bp | GCTAGACTTCCCAGCTCCAATAGGACCCAGCAGCAGAACTCGTGTTaGCTGAACCAGGTCTCCATAGGGCTTGTAGTCTCTCAGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARLPSSNRTQQQNSC*LNQVSIGLVVSQGL Trigger: CAGGCCCTGAGAGACTACAAGCCCTATGGAGACCTGGTTCAGCAAACACGAGTTCTGCTGCTGGGTCCTATTGGAGCTGGGAAGTCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 72 bp | ATCTGTGTGCAAGCCGGCATTCTCACCCAGCCCCAGTaGGTCACACAGAATAAATGGCAGGGGGTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: ICVQAGILTQPQ*VTQNKWQGVTV Trigger: GACAGTGACCCCCTGCCATTTATTCTGTGTGACTCACTGGGGCTGGGTGAGAATGCCGGCTTGCACACAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS GCA 72 bp | GTGTGGCCCTTTAAGATGTGCCATACATCATCTGTGTaGAAGCCGGCATTCTCACCCAGCCCCAGTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VWPFKMCHTSSV*KPAFSPSPSES Trigger: TGACTCACTGGGGCTGGGTGAGAATGCCGGCTTGCACACAGATGATGTATGGCACATCTTAAAGGGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 72 bp | CCCAGCTCCAATAGGACCCAGCAGCAGAACTCGTGTTaGCTGAACCAGGTCTCCATAGGGCTTGTAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSSNRTQQQNSC*LNQVSIGLVVS Trigger: AGAGACTACAAGCCCTATGGAGACCTGGTTCAGCAAACACGAGTTCTGCTGCTGGGTCCTATTGGAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 90 bp | AGGGGGTCACTGTCATCCTTGGCCTTGATGGAATATGTCCTGTACTaGTCAGAGATTCCATCTTCATCACAGCCCACCAAGATCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RGSLSSLALMEYVLY*SEIPSSSQPTKIWC Trigger: ACACCAGATCTTGGTGGGCTGTGATGAAGATGGAATCTCTGACAAGTACAGGACATATTCCATCAAGGCCAAGGATGACAGTGACCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS GCA 72 bp | AACTGGTATCTGTCAGGAGTGTGGCCCTTTAAGATGTaGCATACATCATCTGTGTGCAAGCCGGCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: NWYLSGVWPFKM*HTSSVCKPAFS Trigger: TGAGAATGCCGGCTTGCACACAGATGATGTATGGCACATCTTAAAGGGCCACACTCCTGACAGATACCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 90 bp | CCCAGTGAGTCACACAGAATAAATGGCAGGGGGTCACTGTCATCCTaGGCCTTGATGGAATATGTCCTGTACTTGTCAGAGATTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PSESHRINGRGSLSS*ALMEYVLYLSEIPS Trigger: AGATGGAATCTCTGACAAGTACAGGACATATTCCATCAAGGCCAAGGATGACAGTGACCCCCTGCCATTTATTCTGTGTGACTCACTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 72 bp | CTGTCATCCTTGGCCTTGATGGAATATGTCCTGTACTaGTCAGAGATTCCATCTTCATCACAGCCCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSLALMEYVLY*SEIPSSSQPTK Trigger: CTTGGTGGGCTGTGATGAAGATGGAATCTCTGACAAGTACAGGACATATTCCATCAAGGCCAAGGATGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 90 bp | GAGTCACACAGAATAAATGGCAGGGGGTCACTGTCATCCTTGGCCTaGATGGAATATGTCCTGTACTTGTCAGAGATTCCATCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: ESHRINGRGSLSSLA*MEYVLYLSEIPSSS Trigger: TGATGAAGATGGAATCTCTGACAAGTACAGGACATATTCCATCAAGGCCAAGGATGACAGTGACCCCCTGCCATTTATTCTGTGTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 72 bp | GCAGTGGGTCATGGGTATAGTTCGGATGGTTTGATGTaGTTGGTTTCATGGAATCGAACTGGTATCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: AVGHGYSSDGLM*LVSWNRTGICQ Trigger: CTGACAGATACCAGTTCGATTCCATGAAACCAATCACATCAAACCATCCGAACTATACCCATGACCCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CCA 72 bp | GGATGGTTTGATGTGATTGGTTTCATGGAATCGAACTaGTATCTGTCAGGAGTGTGGCCCTTTAAGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: GWFDVIGFMESN*YLSGVWPFKMC Trigger: GCACATCTTAAAGGGCCACACTCCTGACAGATACCAGTTCGATTCCATGAAACCAATCACATCAAACCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS TCA 72 bp | CTTCAGCAGTGGGTCATGGGTATAGTTCGGATGGTTTaGTGTGATTGGTTTCATGGAATCGAACTGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: LQQWVMGIVRMV*CDWFHGIELVS Trigger: AGATACCAGTTCGATTCCATGAAACCAATCACATCAAACCATCCGAACTATACCCATGACCCACTGCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CCA 72 bp | AGGCAAAACCAAAGACTCCATGGAATGCCTCCAGCTTaGACTTCACAGGACTATAGTTGTATATGTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: RQNQRLHGMPPA*TSQDYSCICLS Trigger: TGACAGACATATACAACTATAGTCCTGTGAAGTCCAAGCTGGAGGCATTCCATGGAGTCTTTGGTTTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 90 bp | GCCAATAACACACTTTTCACTGTAAACCACTATCATGGTAGGACCTaGATTCTCACATGTGCAGAGCAAATTCTGATGAGAAAACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ANNTLFTVNHYHGRT*ILTCAEQILMRKLL Trigger: CAGAAGTTTTCTCATCAGAATTTGCTCTGCACATGTGAGAATCAAGGTCCTACCATGATAGTGGTTTACAGTGAAAAGTGTGTTATTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 72 bp | ACACTTTTCACTGTAAACCACTATCATGGTAGGACCTaGATTCTCACATGTGCAGAGCAAATTCTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: TLFTVNHYHGRT*ILTCAEQILMR Trigger: TCTCATCAGAATTTGCTCTGCACATGTGAGAATCAAGGTCCTACCATGATAGTGGTTTACAGTGAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 72 bp | AGAATGCCATGTTTTATCAAGTCTCTTCGAATTTTCTaGATCTTTGCCACCAGCTCAGAAGAGTGCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: RMPCFIKSLRIF*IFATSSEECIS Trigger: TGAAATGCACTCTTCTGAGCTGGTGGCAAAGATCAAGAAAATTCGAAGAGACTTGATAAAACATGGCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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| CDS CAA 72 bp | TTTTATGGAACAATAAATATGGTGAATCTGGTCCTTTaGCACATAGTGAAAATCCAGTCTCTTGGAGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FYGTINMVNLVL*HIVKIQSLGVQ Trigger: TTGCACTCCAAGAGACTGGATTTTCACTATGTGCAAAAGGACCAGATTCACCATATTTATTGTTCCATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029671.9 |
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