Pregenerated sensors for IFI35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010358Ensembl transcript IDs: ENSMUST00000010502.13, ENSMUST00000131024.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAACTGTCAGGGCCTCCACCTCCCCGCCCCCACGAGTGGGCTTCTaGAAGTGGATCTCAAGGATGTCATGCAGTTCCTGGGCATCCATG | + |
|
Preference number: 1 (lower is better) Translates to: TTVRASTSPPPRVGF*KWISRMSCSSWASM Trigger: CATGGATGCCCAGGAACTGCATGACATCCTTGAGATCCACTTCCAGAAGCCCACTCGTGGGGGCGGGGAGGTGGAGGCCCTGACAGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 90 bp | AAACCACTAACGAGCACCCTGTGGTTATCTGGCTGGCTGGACACCTaGATGTTGGTCACCACAGGCAGCTCCAAGGGCTGGACCTGCACC | + |
|
Preference number: 1 (lower is better) Translates to: KPLTSTLWLSGWLDT*MLVTTGSSKGWTCT Trigger: GGTGCAGGTCCAGCCCTTGGAGCTGCCTGTGGTGACCAACATTCAGGTGTCCAGCCAGCCAGATAACCACAGGGTGCTCGTTAGTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR GCA 90 bp | TGCTGGGCCACTTCTTCATCAGCAAACCCTAGCATGACGGTCCCTTaGAGCATCTCCCGGGTCTCTACATCCCCACCTCCATTCTTGGCC | + |
|
Preference number: 1 (lower is better) Translates to: CWATSSSANPSMTVP*SISRVSTSPPPFLA Trigger: GGCCAAGAATGGAGGTGGGGATGTAGAGACCCGGGAGATGCTGCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 90 bp | GAGACCCTCAGGAGGACCTGCTGCCGGTCCAGTGGGACTCTGAACTaGCCAATCTGGCATAAGTGCTGGGCCACTTCTTCATCAGCAAAC | + |
|
Preference number: 1 (lower is better) Translates to: ETLRRTCCRSSGTLN*PIWHKCWATSSSAN Trigger: GTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCAGGTCCTCCTGAGGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 90 bp | TCTGGCATAAGTGCTGGGCCACTTCTTCATCAGCAAACCCTAGCATaGCGGTCCCTTGCAGCATCTCCCGGGTCTCTACATCCCCACCTC | + |
|
Preference number: 1 (lower is better) Translates to: SGISAGPLLHQQTLA*RSLAASPGSLHPHL Trigger: GAGGTGGGGATGTAGAGACCCGGGAGATGCTGCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR GCA 90 bp | TGCTGCCGGTCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTaGTGGGCCACTTCTTCATCAGCAAACCCTAGCATGACGGTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: CCRSSGTLNWPIWHK*WATSSSANPSMTVP Trigger: AGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 90 bp | TGCCGGTCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTGCTaGGCCACTTCTTCATCAGCAAACCCTAGCATGACGGTCCCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: CRSSGTLNWPIWHKC*ATSSSANPSMTVPC Trigger: GCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 90 bp | AGGAGGACCTGCTGCCGGTCCAGTGGGACTCTGAACTGGCCAATCTaGCATAAGTGCTGGGCCACTTCTTCATCAGCAAACCCTAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: RRTCCRSSGTLNWPI*HKCWATSSSANPSM Trigger: CATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCAGGTCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR GCA 90 bp | CCGCCCCCACGAGTGGGCTTCTGGAAGTGGATCTCAAGGATGTCATaGAGTTCCTGGGCATCCATGACATCAGGAATATTTGTCACCAGC | + |
|
Preference number: 1 (lower is better) Translates to: PPPRVGFWKWISRMS*SSWASMTSGIFVTS Trigger: GCTGGTGACAAATATTCCTGATGTCATGGATGCCCAGGAACTGCATGACATCCTTGAGATCCACTTCCAGAAGCCCACTCGTGGGGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 90 bp | TCTGGAAGTGGATCTCAAGGATGTCATGCAGTTCCTGGGCATCCATaGCATCAGGAATATTTGTCACCAGCACTGAATGAGGGGCTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SGSGSQGCHAVPGHP*HQEYLSPALNEGLA Trigger: AGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCCCAGGAACTGCATGACATCCTTGAGATCCACTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 90 bp | GGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTaGAATATACAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: GSLELQASLVYRGNV*NIQRNLVSNERERE Trigger: CTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTGCTGGGCCACTTCTTCATCCAAGGGCTGGACCTaGACCCGCAGCCGGCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSGTLNWPIWHKCWATSSSKGWT*TRSRQS Trigger: GGACTGCCGGCTGCGGGTGCAGGTCCAGCCCTTGGA...TGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGATGCGCACCTTTAATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTGGAGTGCCAGTGTCAAGGTCTaGGTTCTGCCCTCTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VMRTFNLSSWRQRQAAWSASVKV*VLPSLS Trigger: TGAGAGAGAGGGCAGAACGCAGACCTTGACACTGGC...ACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATTAAAGGTGCGCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTGCTGGGCCACTTCTTCATGGACACCTGAATGTTaGTCACCACAGGCAGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSGTLNWPIWHKCWATSSWTPEC*SPQAAP Trigger: TGGAGCTGCCTGTGGTGACCAACATTCAGGTGTCCA...TGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGAAATCTCAAGGTCTGCGTTCTaGCCTCTCTCTCAGCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: SYRPAWSTEGTSGIYREISRSAF*PLSQLS Trigger: AGATAGCTGAGAGAGAGGGCAGAACGCAGACCTTGA...GATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR CCA 72 bp | TCTGGAAGCTCAGGCTCCTGTGTAGGCTGGAGAGGCTaGGGGGCCCTGAGCTCTCCCCGACAAGGAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGSSGSCVGWRG*GALSSPRQGDA Trigger: AGCGTCTCCTTGTCGGGGAGAGCTCAGGGCCCCCCAGCCTCTCCAGCCTACACAGGAGCCTGAGCTTCCAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 72 bp | CCCTCAGGAGGACCTGCTGCCGGTCCAGTGGGACTCTaGACTGGCCAATCTGGCATAAGTGCTGGGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: PSGGPAAGPVGL*TGQSGISAGPL Trigger: AAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCAGGTCCTCCTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | CCCTGTGGTTATCTGGCTGGCTGGACACCTGAATGTTaGTCACCACAGGCAGCTCCAAGGGCTGGACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PCGYLAGWTPEC*SPQAAPRAGPA Trigger: TGCAGGTCCAGCCCTTGGAGCTGCCTGTGGTGACCAACATTCAGGTGTCCAGCCAGCCAGATAACCACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | AGGAGGACCTGCTGCCGGTCCAGTGGGACTCTGAACTaGCCAATCTGGCATAAGTGCTGGGCCACTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRTCCRSSGTLN*PIWHKCWATSS Trigger: TGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCAGGTCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGCTTCCCCAGCCCCACCTTCACGTACCTCGGCTTTCTGGATCTCACCACTCACCTCCATTCTTGGCCTaGCCAAAGAAGATCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLPQPHLHVPRLSGSHHSPPFLA*PKKISS Trigger: GCTGGAGATCTTCTTTGGCAAGGCCAAGAATGGAGG...TGAGTGGTGAGATCCAGAAAGCCGAGGTACGTGAAGGTGGGGCTGGGGAAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 72 bp | AGTGCTGGGCCACTTCTTCATCAGCAAACCCTAGCATaGCGGTCCCTTGCAGCATCTCCCGGGTCTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: SAGPLLHQQTLA*RSLAASPGSLH Trigger: ATGTAGAGACCCGGGAGATGCTGCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR GCA 72 bp | ACTTCTTCATCAGCAAACCCTAGCATGACGGTCCCTTaGAGCATCTCCCGGGTCTCTACATCCCCACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSANPSMTVP*SISRVSTSPPP Trigger: TGGAGGTGGGGATGTAGAGACCCGGGAGATGCTGCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | TGCTGCCGGTCCAGTGGGACTCTGAACTGGCCAATCTaGCATAAGTGCTGGGCCACTTCTTCATCAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CCRSSGTLNWPI*HKCWATSSSAN Trigger: GTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGGCCACTTCTTCATCAGCAAACCCTAGCATGACGGTCCCTTGCAGCATCTCCCCACCTCCATTCTaGGCCTTGCCAAAGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: CWATSSSANPSMTVPCSISPPPF*ALPKKI Trigger: GATCTTCTTTGGCAAGGCCAAGAATGGAGGTGGGGA...GATGCTGCAAGGGACCGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | TTTAATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTaGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: FNLSSWRQRQAA*SYRPAWSTEGT Trigger: CGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR CCA 72 bp | AGCAGGAAAACCACTAACGAGCACCCTGTGGTTATCTaGCTGGCTGGACACCTGAATGTTGGTCACCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRKTTNEHPVVI*LAGHLNVGHHR Trigger: CCTGTGGTGACCAACATTCAGGTGTCCAGCCAGCCAGATAACCACAGGGTGCTCGTTAGTGGTTTTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR GCA 72 bp | TCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTaGTGGGCCACTTCTTCATCAGCAAACCCTAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SSGTLNWPIWHK*WATSSSANPSM Trigger: CATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | AGGCAGAGACAGGCAGCTTGGAGTTACAGGCCAGCCTaGTCTACAGAGGGAACGTCTGGAATATACAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RQRQAAWSYRPA*STEGTSGIYRE Trigger: TTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR CCA 72 bp | AGTGGGACTCTGAACTGGCCAATCTGGCATAAGTGCTaGGCCACTTCTTCATCAGCAAACCCTAGCATGACG | + |
|
Preference number: 3 (lower is better) Translates to: SGTLNWPIWHKC*ATSSSANPSMT Trigger: CGTCATGCTAGGGTTTGCTGATGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 72 bp | GAACGTCTGGAATATACAGAGAAATCTAGTCTCAAATaGAAGAGAGAGAGAGAGCGCGCGCGTGCACGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ERLEYTEKSSLK*KRERERARARA Trigger: CGCTCGTGCACGCGCGCGCTCTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR GCA 72 bp | CGAGTGGGCTTCTGGAAGTGGATCTCAAGGATGTCATaGAGTTCCTGGGCATCCATGACATCAGGAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: RVGFWKWISRMS*SSWASMTSGIF Trigger: AAATATTCCTGATGTCATGGATGCCCAGGAACTGCATGACATCCTTGAGATCCACTTCCAGAAGCCCACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR TCA 72 bp | GGATCTCAAGGATGTCATGCAGTTCCTGGGCATCCATaGCATCAGGAATATTTGTCACCAGCACTGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSQGCHAVPGHP*HQEYLSPALNE Trigger: CTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCCCAGGAACTGCATGACATCCTTGAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| 3UTR CCA 72 bp | GAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTaGAATATACAGAGAAATCTAGTCTCAAATGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELQASLVYRGNV*NIQRNLVSNER Trigger: TCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| 3UTR TCA 72 bp | GGCATCCATGACATCAGGAATATTTGTCACCAGCACTaGATGAGGGGCTTGCTGGAATTTGATCTAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GIHDIRNICHQH*MRGLLEFDLEK Trigger: TTTTTCTAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGCGCGCGCGTGCACGAGCGAGCCATGGGAAAGCCAGTGTCAAGGTCTGCTGCCGGTCCAGTaGGACTCTGAACTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RERARACTSEPWESQCQGLLPVQ*DSELAN Trigger: ATTGGCCAGTTCAGAGTCCCACTGGACCGGCAGCAG...ACCTTGACACTGGCTTTCCCATGGCTCGCTCGTGCACGCGCGCGCTCTCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR GCA 90 bp | ACGCTTCCCCAGCCCCACCTTCACGTACCTCGGCTTTCTGGATCTCACCACTCACGCTCCCTTTTGAGCTaGTGCAGCTCCTGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPQPHLHVPRLSGSHHSRSLLS*CSSCSL Trigger: GAGGCTGCAGGAGCTGCAGCAGCTCAAAAGGGAGCG...TGAGTGGTGAGATCCAGAAAGCCGAGGTACGTGAAGGTGGGGCTGGGGAAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTAATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTGGAGTTACAGGCCAGTCCAAGGGCTGGACCTaGACCCGCAGCCGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLISAVGGRDRQLGVTGQSKGWT*TRSRQS Trigger: GGACTGCCGGCTGCGGGTGCAGGTCCAGCCCTTGGA...CTGGCCTGTAACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATTAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGCTGTGCGCTCCCTTTTaGGCTGCTGCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRQLGVTGQPGLQRERLLCAPF*AAAAPA Trigger: TGCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAG...CAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR GCA 90 bp | ACGCTTCCCCAGCCCCACCTTCACGTACCTCGGCTTTCTGGATCTCACCACTCAAGCTGCTGCAGCTCCTaGAGCCTCATCTTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPQPHLHVPRLSGSHHSSCCSS*SLILSL Trigger: CAGGCTCAAGATGAGGCTGCAGGAGCTGCAGCAGCT...TGAGTGGTGAGATCCAGAAAGCCGAGGTACGTGAAGGTGGGGCTGGGGAAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGGGACTCTGAACTGGCCAATCTGGCATAAGTGCTGGGCCACTTCTTCACTGTGCGCTCCCTTTTaGGCTGCTGCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGTLNWPIWHKCWATSSLCAPF*AAAAPA Trigger: TGCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAG...TGAAGAAGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAGTCACCAGCACTGAATaGGGGGCTTGCTGGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQAAWSYRPAWSTEGTSGVTSTE*GACWNL Trigger: CAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGAC...TCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTGGAGTTACAGGCCAGCCTGGAGTGGGACTCTGAACTaGCCAATCTGGCATAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSSWRQRQAAWSYRPAWSGTLN*PIWHKC Trigger: GCACTTATGCCAGATTGGCCAGTTCAGAGTCCCACT...CCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR GCA 90 bp | GAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGAAATCGCTCCCTTTTGAGCTaGTGCAGCTCCTGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQASLVYRGNVWNIQRNRSLLS*CSSCSL Trigger: GAGGCTGCAGGAGCTGCAGCAGCTCAAAAGGGAGCG...ATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | AGACAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATGTCATGCAGTTCCTaGGCATCCATGACATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQAAWSYRPAWSTEGTSGMSCSS*ASMTSG Trigger: TCCTGATGTCATGGATGCCCAGGAACTGCATGACAT...TCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGCTGAACTGGCCAATCTaGCATAAGTGCTGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGVTGQPGLQRERLEYTELNWPI*HKCWAT Trigger: AGTGGCCCAGCACTTATGCCAGATTGGCCAGTTCAG...CTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGCCACGAGTGGGCTTCTaGAAGTGGATCTCAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGVTGQPGLQRERLEYTEPRVGF*KWISRM Trigger: CATCCTTGAGATCCACTTCCAGAAGCCCACTCGTGG...CTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR TCA 90 bp | ACAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATGTTCCTGGGCATCCATaGCATCAGGAATATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSLELQASLVYRGNVWNVPGHP*HQEYLS Trigger: TGACAAATATTCCTGATGTCATGGATGCCCAGGAAC...ATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR GCA 90 bp | GGGAACGTCTGGAATATACAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAGAGCTGCTGCAGCTCCTaGAGCCTCATCTTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNVWNIQRNLVSNERERESCCSS*SLILSL Trigger: CAGGCTCAAGATGAGGCTGCAGGAGCTGCAGCAGCT...CTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCAGCTATCTTGAAGTAAAGAAGACCATCACACCAGGTTGGCACTTTTGGACACCTGAATGTTaGTCACCACAGGCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSYLEVKKTITPGWHFWTPEC*SPQAAP Trigger: TGGAGCTGCCTGTGGTGACCAACATTCAGGTGTCCA...AAAGTGCCAACCTGGTGTGATGGTCTTCTTTACTTCAAGATAGCTGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR TCA 90 bp | GGGAACGTCTGGAATATACAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAGAGGAACTTCAGGTACTaGGAATGGGATCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNVWNIQRNLVSNERERERNFRY*EWDLGS Trigger: GGAGCCAAGATCCCATTCTCAGTACCTGAAGTTCCT...CTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | AATATACAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAGAGCGCGCGCGTGTGCTTAGTTTGGCCTTaGAATACCAGAGGAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIQRNLVSNERERESARVCLVWP*NTRGTS Trigger: TGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCA...CACGCGCGCGCTCTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CCA 90 bp | AACGTCTGGAATATACAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAGAGCCTGCCCTGCTTAGTTTaGCCTTGGAATACCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVWNIQRNLVSNERERESLPCLV*PWNTRG Trigger: TCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAG...GCTCTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTGTATATTCCAGACGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 90 bp | AATGGGATCTTGGCTCCGGGAGAGCCTGTGCGCTCCCTTTTGAGCTaGTGCAGCTCCTGCAGCCTCATCTTGAGCCTGGCTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGILAPGEPVRSLLS*CSSCSLILSLACSS Trigger: GGAGGAGCAAGCCAGGCTCAAGATGAGGCTGCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAGGCTCTCCCGGAGCCAAGATCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 90 bp | ATCAACCACTTGGCTCCGGGAGAGCCTGTGCGCTCCCTTTTGAGCTaGTGCAGCTCCTGCAGCCTCATCTTGAGCCTGGCTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: INHLAPGEPVRSLLS*CSSCSLILSLACSS Trigger: GGAGGAGCAAGCCAGGCTCAAGATGAGGCTGCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAGGCTCTCCCGGAGCCAAGTGGTTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGGAGACGCTTCCCCAGCCCCACCTTCACGTACCTCGGCTTTCTGGATCTTCCTGCAGCCTCATCTaGAGCCTGGCTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DKETLPQPHLHVPRLSGSSCSLI*SLACSS Trigger: GGAGGAGCAAGCCAGGCTCAAGATGAGGCTGCAGGA...AGATCCAGAAAGCCGAGGTACGTGAAGGTGGGGCTGGGGAAGCGTCTCCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS-3UTR CAA 90 bp | GTGATGCGCACCTTTAATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTGGAGTTCCTGCAGCCTCATCTaGAGCCTGGCTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VMRTFNLSSWRQRQAAWSSCSLI*SLACSS Trigger: GGAGGAGCAAGCCAGGCTCAAGATGAGGCTGCAGGA...ACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATTAAAGGTGCGCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAATCTAGTCTCAAATGAAAGAGAGAGAGAGAGCGCGCGCGTGCACGAGCCTGTGCGCTCCCTTTaGAGCTGCTGCAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRNLVSNERERESARVHEPVRSL*SCCSSC Trigger: GCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAGG...CTCGTGCACGCGCGCGCTCTCTCTCTCTCTTTCATTTGAGACTAGATTTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 90 bp | GCCCTGCTTAGTTTGGCCTTGGAATACCAGAGGAACTTCAGGTACTaGGAATGGGATCTTGGCTCCGGGAGAGCCTGTGCGCTCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSLALEYQRNFRY*EWDLGSGRACALPF Trigger: AAAAGGGAGCGCACAGGCTCTCCCGGAGCCAAGATCCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | GTGATGCGCACCTTTAATCTCAGCAGTTGGAGGCAGAGACAGGCAGCTTGGAGTCCTGCCCTGCTTAGTTaGGCCTTGGAATACCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VMRTFNLSSWRQRQAAWSPALLS*ALEYQR Trigger: CCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGG...ACTCCAAGCTGCCTGTCTCTGCCTCCAACTGCTGAGATTAAAGGTGCGCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATATCCCCACCTCCATTCTaGGCCTTGCCAAAGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QAAWSYRPAWSTEGTSGISPPPF*ALPKKI Trigger: GATCTTCTTTGGCAAGGCCAAGAATGGAGGTGGGGA...TATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 90 bp | CCTTTTGTTGTAGCAACCGATCAACCACTTTGGGGTCCTCAAAGGTaGCCAGAGCAGAACCTTCAGGCAGAGGGCAGCAGACCTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFVVATDQPLWGPQR*PEQNLQAEGSRPSS Trigger: ACTTGAAGGTCTGCTGCCCTCTGCCTGAAGGTTCTGCTCTGGTCACCTTTGAGGACCCCAAAGTGGTTGATCGGTTGCTACAACAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAATACTGCTTAGTTTGGCCTaGGAATACCAGAGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAAWSYRPAWSTEGTSGILLSLA*EYQRNF Trigger: GAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAG...TATTCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | AGACAGGCAGCTTGGAGTTACAGGCCAGCCTGGTCTACAGAGGGAACGTCTGGAAAGAAGATCTCCAGCTaGTCCAACAGTTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQAAWSYRPAWSTEGTSGKKISS*SNSSSS Trigger: TGAAGAGGAACTGTTGGACAAGCTGGAGATCTTCTT...TCCAGACGTTCCCTCTGTAGACCAGGCTGGCCTGTAACTCCAAGCTGCCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | AAGATCTCCAGCTTGTCCAACAGTTCCTCTTCACTCAGCCTAAGTCCAGCAGGACATCTTGAGCCTGGCTaGCTCCTCCTGAAGACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KISSLSNSSSSLSLSPAGHLEPG*LLLKTV Trigger: TACAGTCTTCAGGAGGAGCAAGCCAGGCTCAAGATG...TCCTGCTGGACTTAGGCTGAGTGAAGAGGAACTGTTGGACAAGCTGGAGATCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131024.2 |
||
| CDS TCA 90 bp | TCCTGGGCATCCATGACATCAGGAATATTTGTCACCAGCACTGAATaGGGGGCTTGCTGGAATTTGATCTCGGCTTTCTGGATCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SWASMTSGIFVTSTE*GACWNLISAFWISP Trigger: TGGTGAGATCCAGAAAGCCGAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCCCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 90 bp | CAGTTCCTGGGCATCCATGACATCAGGAATATTTGTCACCAGCACTaGATGAGGGGCTTGCTGGAATTTGATCTCGGCTTTCTGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QFLGIHDIRNICHQH*MRGLLEFDLGFLDL Trigger: GAGATCCAGAAAGCCGAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCCCAGGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 90 bp | AGAGGGCAGCAGACCTTCAAGTTAGAAACTACAAACTTGGGCACTTaGCTGCCCTGCTTAGTTTGGCCTTGGAATACCAGAGGAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGQQTFKLETTNLGT*LPCLVWPWNTRGTS Trigger: TGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTTGAAGGTCTGCTGCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CCA 90 bp | GAAACTACAAACTTGGGCACTTGCCTGCCCTGCTTAGTTTGGCCTTaGAATACCAGAGGAACTTCAGGTACTGAGAATGGGATCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETTNLGTCLPCLVWP*NTRGTSGTENGILA Trigger: AGCCAAGATCCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCTGCGTTCTGCCCTCTCTCTCAGCTATCTTGAAGTAAAGAAGACCATCTACAAACTTGGGCACTaGCCTGCCCTGCTTAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGLRSALSLSYLEVKKTIYKLGH*PALLSL Trigger: CAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTA...GATGGTCTTCTTTACTTCAAGATAGCTGAGAGAGAGGGCAGAACGCAGACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 90 bp | CAGACCTTCAAGTTAGAAACTACAAACTTGGGCACTTGCCTGCCCTaGTTAGTTTGGCCTTGGAATACCAGAGGAACTTCAGGTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QTFKLETTNLGTCLP*LVWPWNTRGTSGTE Trigger: CTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTTGAAGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGAAATCTAGTCTCAAACCTCCATTCTTGGCCTaGCCAAAGAAGATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPGLQRERLEYTEKSSLKPPFLA*PKKISS Trigger: GCTGGAGATCTTCTTTGGCAAGGCCAAGAATGGAGG...TTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CCA 90 bp | AAGTTAGAAACTACAAACTTGGGCACTTGCCTGCCCTGCTTAGTTTaGCCTTGGAATACCAGAGGAACTTCAGGTACTGAGAATGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KLETTNLGTCLPCLV*PWNTRGTSGTENGI Trigger: GATCCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGTCTACAGAGGGAACGTCTGGAATATACAGAGAAATCTAGTCTCAAATCATCTTGAGCCTGGCTaGCTCCTCCTGAAGACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLVYRGNVWNIQRNLVSNHLEPG*LLLKTV Trigger: TACAGTCTTCAGGAGGAGCAAGCCAGGCTCAAGATG...ATTTGAGACTAGATTTCTCTGTATATTCCAGACGTTCCCTCTGTAGACCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 72 bp | TTGGCTCCGGGAGAGCCTGTGCGCTCCCTTTTGAGCTaGTGCAGCTCCTGCAGCCTCATCTTGAGCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAPGEPVRSLLS*CSSCSLILSLA Trigger: AGCCAGGCTCAAGATGAGGCTGCAGGAGCTGCAGCAGCTCAAAAGGGAGCGCACAGGCTCTCCCGGAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010502.13 ENSMUST00000131024.2 |
||
| CDS CAA 90 bp | TGGCCTTGGAATACCAGAGGAACTTCAGGTACTGAGAATGGGATCTaGGCTCCGGGAGAGCCTGTGCGCTCCCTTTTGAGCTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPWNTRGTSGTENGI*APGEPVRSLLSCCS Trigger: GCTGCAGCAGCTCAAAAGGGAGCGCACAGGCTCTCCCGGAGCCAAGATCCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 72 bp | AGTTTGGCCTTGGAATACCAGAGGAACTTCAGGTACTaGGAATGGGATCTTGGCTCCGGGAGAGCCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLALEYQRNFRY*EWDLGSGRACA Trigger: CGCACAGGCTCTCCCGGAGCCAAGATCCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CCA 72 bp | AACTTGGGCACTTGCCTGCCCTGCTTAGTTTGGCCTTaGAATACCAGAGGAACTTCAGGTACTGAGAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: NLGTCLPCLVWP*NTRGTSGTENG Trigger: CCCATTCTCAGTACCTGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CAA 72 bp | AGAGGGCAGCAGACCTTCAAGTTAGAAACTACAAACTaGGGCACTTGCCTGCCCTGCTTAGTTTGGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGQQTFKLETTN*GTCLPCLVWPW Trigger: CCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTTGAAGGTCTGCTGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CAA 90 bp | CAGAGGGCAGCAGACCTTCAAGTTAGAAACTACAAACTTGGGCACTaGCCTGCCCTGCTTAGTTTGGCCTTGGAATACCAGAGGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRAADLQVRNYKLGH*PALLSLALEYQRNF Trigger: GAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTTGAAGGTCTGCTGCCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 72 bp | TTGTCACCAGCACTGAATGAGGGGCTTGCTGGAATTTaGTCTCGGCTTTCTGGATCTCACCACTCACATAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPALNEGLAGI*SRLSGSHHSHR Trigger: CCTATGTGAGTGGTGAGATCCAGAAAGCCGAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS CAA 72 bp | CTGTGTTCCTTTTGTTGTAGCAACCGATCAACCACTTaGGGGTCCTCAAAGGTGACCAGAGCAGAACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCSFCCSNRSTT*GSSKVTRAEPS Trigger: TGAAGGTTCTGCTCTGGTCACCTTTGAGGACCCCAAAGTGGTTGATCGGTTGCTACAACAAAAGGAACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 72 bp | TCCATGACATCAGGAATATTTGTCACCAGCACTGAATaGGGGGCTTGCTGGAATTTGATCTCGGCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMTSGIFVTSTE*GACWNLISAFW Trigger: CCAGAAAGCCGAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS TCA 72 bp | GGCATCCATGACATCAGGAATATTTGTCACCAGCACTaGATGAGGGGCTTGCTGGAATTTGATCTCGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GIHDIRNICHQH*MRGLLEFDLGF Trigger: AAAGCCGAGATCAAATTCCAGCAAGCCCCTCATTCAGTGCTGGTGACAAATATTCCTGATGTCATGGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 72 bp | CAGACCTTCAAGTTAGAAACTACAAACTTGGGCACTTaGCTGCCCTGCTTAGTTTGGCCTTGGAATACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QTFKLETTNLGT*LPCLVWPWNTR Trigger: TCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTTGAAGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||
| CDS GCA 72 bp | AAGTTAGAAACTACAAACTTGGGCACTTGCCTGCCCTaGTTAGTTTGGCCTTGGAATACCAGAGGAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KLETTNLGTCLP*LVWPWNTRGTS Trigger: TGAAGTTCCTCTGGTATTCCAAGGCCAAACTAAGCAGGGCAGGCAAGTGCCCAAGTTTGTAGTTTCTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010502.13 |
||