Pregenerated sensors for IFI30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031838Ensembl transcript IDs: ENSMUST00000222087.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCTTGTCTCTGAGAAGTCTGGAGTCTGGGCTTTGTGGGACATGTaGAAGGTTTTCATAGCGAGGCAGCAGCTCTTGCAGGTTGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: ILVSEKSGVWALWDM*KVFIARQQLLQVGN Trigger: ATTGCCAACCTGCAAGAGCTGCTGCCTCGCTATGAAAACCTTGCACATGTCCCACAAAGCCCAGACTCCAGACTTCTCAGAGACAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR TCA 90 bp | CTGGGCTTTGTGGGACATGTGCAAGGTTTTCATAGCGAGGCAGCAGCTCTTGCAGGTGTAGGGCATCTGTaGGCTGGGCATTCTCATGCA | + |
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Preference number: 4 (lower is better) Translates to: LGFVGHVQGFHSEAAALAGVGHL*AGHSHA Trigger: TGCATGAGAATGCCCAGCTCACAGATGCCCTACACC...TGCAAGAGCTGCTGCCTCGCTATGAAAACCTTGCACATGTCCCACAAAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CCA 90 bp | TGGGCTTTGTGGGACATGTGCAAGGTTTTCATAGCGAGGCAGCAGCTCTTGCAGCACCATCAGCCAGGTTaGGAACAAATCCCGGACGAG | + |
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Preference number: 4 (lower is better) Translates to: WALWDMCKVFIARQQLLQHHQPG*EQIPDE Trigger: CTCGTCCGGGATTTGTTCCCAACCTGGCTGATGGTG...CTGCAAGAGCTGCTGCCTCGCTATGAAAACCTTGCACATGTCCCACAAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTTGTGGGACATGTGCAAGGTTTTCATAGCGAGGCAGCAGCTCTTGCAGGAGGAGCAGATGTCTaGCTTCTCCGTTCCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LGFVGHVQGFHSEAAALAGGADV*LLRSLV Trigger: TACCAGGGAACGGAGAAGCCAGACATCTGCTCCTCC...TGCAAGAGCTGCTGCCTCGCTATGAAAACCTTGCACATGTCCCACAAAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR GCA 90 bp | GCTCTTGCAGGTTGGCAATTTGAAGAAGCTGGGCAGTTTTTCCTGGGACGAGTTACACATCGTGGGCCTTaGAGGTGGTTGTGCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: ALAGWQFEEAGQFFLGRVTHRGP*RWLCLR Trigger: CCGAAGGCACAACCACCTGCAAGGCCCACGATGTGT...AACTCGTCCCAGGAAAAACTGCCCAGCTTCTTCAAATTGCCAACCTGCAAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR GCA 90 bp | TGGGCTTTGTGGGACATGTGCAAGGTTTTCATAGCGAGGCAGCAGCTCTTGCAGGACATTTCTCTCCTGTaGATTCCCGTAGGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: WALWDMCKVFIARQQLLQDISLL*IPVGHQ Trigger: CTGGTGCCCTACGGGAATGCACAGGAGAGAAATGTC...CTGCAAGAGCTGCTGCCTCGCTATGAAAACCTTGCACATGTCCCACAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CCA 90 bp | GCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGGAGTCTGGGTGGGGGAGTCGGCAATaGAGGAGCAGATGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: APFENKARSLSLRSLESGWGSRQ*RSRCLA Trigger: AGCCAGACATCTGCTCCTCCATTGCCGACTCCCCCA...CCCAGACTCCAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| 3UTR CAA 72 bp | TTCATAGCGAGGCAGCAGCTCTTGCAGGTTGGCAATTaGAAGAAGCTGGGCAGTTTTTCCTGGGACGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FIARQQLLQVGN*KKLGSFSWDEF Trigger: AAACTCGTCCCAGGAAAAACTGCCCAGCTTCTTCAAATTGCCAACCTGCAAGAGCTGCTGCCTCGCTATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CCA 90 bp | GCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGGAGTCTGGGTCTGGGAACCTCGAGTaGGAACAGCAGAAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: APFENKARSLSLRSLESGSGNLE*EQQKQK Trigger: CTTCTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGA...CCCAGACTCCAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CCA 90 bp | TTAGCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGGAGTCTCAGGGCACATACTCGTaGGGTGGGTGTAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LAPFENKARSLSLRSLESQGTYS*GGCRAS Trigger: AGATGCCCTACACCCACCCCACGAGTATGTGCCCTG...AGACTCCAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR GCA 90 bp | TTAGCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGGAGTCTTCAGGAGCATACACCTaGAGGCACGGTCCCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LAPFENKARSLSLRSLESSGAYT*RHGPSF Trigger: GAAACTGGGACCGTGCCTGCAGGTGTATGCTCCTGA...AGACTCCAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR TCA 90 bp | TTAAATTTAGCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGCATGATACTCTCTGGTaGCACCTCAGGAGCATACAC | + |
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Preference number: 4 (lower is better) Translates to: LNLAPFENKARSLSLRSLHDTLW*HLRSIH Trigger: GTGTATGCTCCTGAGGTGTCACCAGAGAGTATCATG...CAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGCTAAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 90 bp | GGTGGTGAAGGGGGCAATGGGCGTGGCCCCAAGAGGCACACATCGTaGGCCTTGCAGGTGGTTGTGCCTTCGGAGGATGCTTGCGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: GGEGGNGRGPKRHTS*ALQVVVPSEDACER Trigger: CCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCACGATGTGTGCCTCTTGGGGCCACGCCCATTGCCCCCTTCACCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 90 bp | CACACATCGTGGGCCTTGCAGGTGGTTGTGCCTTCGGAGGATGCTTaGGAAAGGGACGCAGTGGCTGCTCTGGGAACCTCGAGTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HTSWALQVVVPSEDA*ERDAVAALGTSSGN Trigger: GTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCACGATGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 90 bp | TGCAGGTGGTTGTGCCTTCGGAGGATGCTTGCGAAAGGGACGCAGTaGCTGCTCTGGGAACCTCGAGTGGGAACAGCAGAAGCAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: CRWLCLRRMLAKGTQ*LLWEPRVGTAEAEG Trigger: CCCTTCTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 90 bp | GGTGGTTGTGCCTTCGGAGGATGCTTGCGAAAGGGACGCAGTGGCTaGTCTGGGAACCTCGAGTGGGAACAGCAGAAGCAGAAGGGACAA | + |
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Preference number: 5 (lower is better) Translates to: GGCAFGGCLRKGRSG*SGNLEWEQQKQKGQ Trigger: TTGTCCCTTCTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 90 bp | CTGTGTGCCCCGTTTTCCTGTGGCGCACTCCATGATACTCTCTGGTaGCACCTCAGGAGCATACACCTGCAGGCACGGTCCCAGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LCAPFSCGALHDTLW*HLRSIHLQARSQFL Trigger: AAGAAACTGGGACCGTGCCTGCAGGTGTATGCTCCTGAGGTGTCACCAGAGAGTATCATGGAGTGCGCCACAGGAAAACGGGGCACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 90 bp | AGACTATGCTCAGGAGCTCGCTGGGGTCCTTCAAAGGTTTCTCATTaGCCAGCACCCAGGGCACATACTCGTGGGGTGGGTGTAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RLCSGARWGPSKVSH*PAPRAHTRGVGVGH Trigger: ATGCCCTACACCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACCTTTGAAGGACCCCAGCGAGCTCCTGAGCATAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 90 bp | GCAATGGAGGAGCAGATGTCTGGCTTCTCCGTTCCCTGGTACAGCTaGCAGACTATGCTCAGGAGCTCGCTGGGGTCCTTCAAAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: AMEEQMSGFSVPWYS*QTMLRSSLGSFKGF Trigger: GAAACCTTTGAAGGACCCCAGCGAGCTCCTGAGCATAGTCTGTCAGCTGTACCAGGGAACGGAGAAGCCAGACATCTGCTCCTCCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 90 bp | TTGTGCCTTCGGAGGATGCTTGCGAAAGGGACGCAGTGGCTGCTCTaGGAACCTCGAGTGGGAACAGCAGAAGCAGAAGGGACAAAAATG | + |
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Preference number: 5 (lower is better) Translates to: LCLRRMLAKGTQWLL*EPRVGTAEAEGTKM Trigger: CATTTTTGTCCCTTCTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 90 bp | GCGCACTCCATGATACTCTCTGGTGACACCTCAGGAGCATACACCTaGAGGCACGGTCCCAGTTTCTTCTCCATATCATCCATCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AHSMILSGDTSGAYT*RHGPSFFSISSISS Trigger: GGAGGAGATGGATGATATGGAGAAGAAACTGGGACCGTGCCTGCAGGTGTATGCTCCTGAGGTGTCACCAGAGAGTATCATGGAGTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 90 bp | GGGCACCAGGGTGATGTTCATGATTTCCATCACCATCAGCCAGGTTaGGAACAAATCCCGGACGAGGAAGTAGCGACAAGCTCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: GHQGDVHDFHHHQPG*EQIPDEEVATSSTQ Trigger: CTGTGTGGAGCTTGTCGCTACTTCCTCGTCCGGGATTTGTTCCCAACCTGGCTGATGGTGATGGAAATCATGAACATCACCCTGGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 90 bp | TCCTTCAAAGGTTTCTCATTGACCAGCACCCAGGGCACATACTCGTaGGGTGGGTGTAGGGCATCTGTGAGCTGGGCATTCTCATGCATG | + |
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Preference number: 5 (lower is better) Translates to: SFKGFSLTSTQGTYS*GGCRASVSWAFSCM Trigger: CATGCATGAGAATGCCCAGCTCACAGATGCCCTACACCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACCTTTGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS-3UTR CAA 90 bp | TTAAATTTAGCACCATTTGAAAATAAGGCAAGATCCTTGTCTCTGAGAAGTCTGTCACCATCAGCCAGGTaGGGAACAAATCCCGGACGA | + |
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Preference number: 5 (lower is better) Translates to: LNLAPFENKARSLSLRSLSPSAR*GTNPGR Trigger: TCGTCCGGGATTTGTTCCCAACCTGGCTGATGGTGA...CAGACTTCTCAGAGACAAGGATCTTGCCTTATTTTCAAATGGTGCTAAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CAA 90 bp | GAAGGGGGCAATGGGCGTGGCCCCAAGAGGCACACATCGTGGGCCTaGCAGGTGGTTGTGCCTTCGGAGGATGCTTGCGAAAGGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: EGGNGRGPKRHTSWA*QVVVPSEDACERDA Trigger: TGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCACGATGTGTGCCTCTTGGGGCCACGCCCATTGCCCCCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 72 bp | TGGGCCTTGCAGGTGGTTGTGCCTTCGGAGGATGCTTaGGAAAGGGACGCAGTGGCTGCTCTGGGAACCTCG | + |
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Preference number: 6 (lower is better) Translates to: WALQVVVPSEDA*ERDAVAALGTS Trigger: CGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | GTGGCCCCAAGAGGCACACATCGTGGGCCTTGCAGGTaGTTGTGCCTTCGGAGGATGCTTGCGAAAGGGACG | + |
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Preference number: 6 (lower is better) Translates to: VAPRGTHRGPCR*LCLRRMLAKGT Trigger: CGTCCCTTTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCACGATGTGTGCCTCTTGGGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 72 bp | GCCTTCGGAGGATGCTTGCGAAAGGGACGCAGTGGCTaGTCTGGGAACCTCGAGTGGGAACAGCAGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AFGGCLRKGRSG*SGNLEWEQQKQ Trigger: CTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | CGGAGGATGCTTGCGAAAGGGACGCAGTGGCTGCTCTaGGAACCTCGAGTGGGAACAGCAGAAGCAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRMLAKGTQWLL*EPRVGTAEAEG Trigger: CCCTTCTGCTTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CAA 72 bp | AATGGGCGTGGCCCCAAGAGGCACACATCGTGGGCCTaGCAGGTGGTTGTGCCTTCGGAGGATGCTTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: NGRGPKRHTSWA*QVVVPSEDACE Trigger: TTCGCAAGCATCCTCCGAAGGCACAACCACCTGCAAGGCCCACGATGTGTGCCTCTTGGGGCCACGCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CAA 72 bp | CTCAGGAGCTCGCTGGGGTCCTTCAAAGGTTTCTCATaGACCAGCACCCAGGGCACATACTCGTGGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LRSSLGSFKGFS*TSTQGTYSWGG Trigger: CCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACCTTTGAAGGACCCCAGCGAGCTCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CAA 90 bp | CAGACTATGCTCAGGAGCTCGCTGGGGTCCTTCAAAGGTTTCTCATaGACCAGCACCCAGGGCACATACTCGTGGGGTGGGTGTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QTMLRSSLGSFKGFS*TSTQGTYSWGGCRA Trigger: TGCCCTACACCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACCTTTGAAGGACCCCAGCGAGCTCCTGAGCATAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 72 bp | CCGTTTTCCTGTGGCGCACTCCATGATACTCTCTGGTaGCACCTCAGGAGCATACACCTGCAGGCACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PFSCGALHDTLW*HLRSIHLQARS Trigger: GGACCGTGCCTGCAGGTGTATGCTCCTGAGGTGTCACCAGAGAGTATCATGGAGTGCGCCACAGGAAAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 72 bp | TCAGGAGCTCGCTGGGGTCCTTCAAAGGTTTCTCATTaGCCAGCACCCAGGGCACATACTCGTGGGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SGARWGPSKVSH*PAPRAHTRGVG Trigger: ACCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACCTTTGAAGGACCCCAGCGAGCTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS TCA 72 bp | GAGCAGATGTCTGGCTTCTCCGTTCCCTGGTACAGCTaGCAGACTATGCTCAGGAGCTCGCTGGGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: EQMSGFSVPWYS*QTMLRSSLGSF Trigger: GAAGGACCCCAGCGAGCTCCTGAGCATAGTCTGTCAGCTGTACCAGGGAACGGAGAAGCCAGACATCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | TTGTGCCTTCGGAGGATGCTTGCGAAAGGGACGCAGTaGCTGCTCTGGGAACCTCGAGTGGGAACAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LCLRRMLAKGTQ*LLWEPRVGTAE Trigger: TTCTGCTGTTCCCACTCGAGGTTCCCAGAGCAGCCACTGCGTCCCTTTCGCAAGCATCCTCCGAAGGCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | GGTTTCTCATTGACCAGCACCCAGGGCACATACTCGTaGGGTGGGTGTAGGGCATCTGTGAGCTGGGCATTC | + |
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Preference number: 6 (lower is better) Translates to: GFSLTSTQGTYS*GGCRASVSWAF Trigger: GAATGCCCAGCTCACAGATGCCCTACACCCACCCCACGAGTATGTGCCCTGGGTGCTGGTCAATGAGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | TCCACCATGTTCAGTCTACACTCCAGCTCCCCGTGCTaGCACGTGAACTCCCACGTACCGCTGACATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: STMFSLHSSSPC*HVNSHVPLTFL Trigger: GAGAAATGTCAGCGGTACGTGGGAGTTCACGTGCCAGCACGGGGAGCTGGAGTGTAGACTGAACATGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | CTTCCTGGGGGAGTCGGCAATGGAGGAGCAGATGTCTaGCTTCTCCGTTCCCTGGTACAGCTGACAGACTAT | + |
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Preference number: 6 (lower is better) Translates to: LPGGVGNGGADV*LLRSLVQLTDY Trigger: ATAGTCTGTCAGCTGTACCAGGGAACGGAGAAGCCAGACATCTGCTCCTCCATTGCCGACTCCCCCAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | ACATACTCGTGGGGTGGGTGTAGGGCATCTGTGAGCTaGGCATTCTCATGCATGAGCTGTGTGCCCCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: TYSWGGCRASVS*AFSCMSCVPRF Trigger: AAAACGGGGCACACAGCTCATGCATGAGAATGCCCAGCTCACAGATGCCCTACACCCACCCCACGAGTATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS GCA 72 bp | CGTGAACTCCCACGTACCGCTGACATTTCTCTCCTGTaGATTCCCGTAGGGCACCAGGGTGATGTTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: RELPRTADISLL*IPVGHQGDVHD Trigger: ATCATGAACATCACCCTGGTGCCCTACGGGAATGCACAGGAGAGAAATGTCAGCGGTACGTGGGAGTTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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| CDS CCA 72 bp | GGTGATGTTCATGATTTCCATCACCATCAGCCAGGTTaGGAACAAATCCCGGACGAGGAAGTAGCGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: GDVHDFHHHQPG*EQIPDEEVATS Trigger: GCTTGTCGCTACTTCCTCGTCCGGGATTTGTTCCCAACCTGGCTGATGGTGATGGAAATCATGAACATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222087.4 |
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