Pregenerated sensors for IFI27L2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021208Ensembl transcript IDs: ENSMUST00000044687.7
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCATCTTaGTACTTTTTCTCCTGGGTAATTCTTATAAGCTTTGAGTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: FEVPSFSEVQRTSAS*YFFSWVILISFELN Trigger: GTTTAACTCAAAGCTTATAAGAATTACCCAGGAGAAAAAGTACCAAGATGCACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| 3UTR TCA 72 bp | TTGGTACTTTTTCTCCTGGGTAATTCTTATAAGCTTTaGGTTAAACTGGTAGAGATGTCATCTCCTAAATTC | + |
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Preference number: 3 (lower is better) Translates to: LVLFLLGNSYKL*VKLVEMSSPKF Trigger: GAATTTAGGAGATGACATCTCTACCAGTTTAACTCAAAGCTTATAAGAATTACCCAGGAGAAAAAGTACCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCAATGCCTGCCCCAGTaGAGCCCACGGCACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVQCLPQ*SPRHSG Trigger: CCCTGAGTGCCGTGGGCTTCACTGGGGCAGGCATTG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGACTCAGGGCGACAGGTaGCCCTGCCACAGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVTQGDR*PCHSQS Trigger: GCTCTGGCTGTGGCAGGGGCACCTGTCGCCCTGAGT...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCCCAGCTGCAATGCCTaGCCCAGTGAAGCCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVPSCNA*PSEAHG Trigger: GCCGTGGGCTTCACTGGGGCAGGCATTGCAGCTGGG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGTCCTGCGGAGGATCCTaGGGCCCTGACTCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVSCGGS*GPDSCS Trigger: AGAGCAGGAGTCAGGGCCTCAGGATCCTCCGCAGGA...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCTGGCTCCTGCTCTCTaGAGGCTCCCATGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVLAPAL*RLPWLL Trigger: CAGGAGCCATGGGAGCCTGCAGAGAGCAGGAGCCAG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGTCCAAGGACCCCCACTaGCTGGAGTGTGGCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVSKDPH*LECGYQ Trigger: CTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGA...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCTCCTGTGGCTCCTaGAGCTCCTGCGGAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGSCGS*SSCGGS Trigger: GGATCCTCCGCAGGAGCTGCAGGAGCCACAGGAGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCGATAGGTGCCCCTaGCACAGCCAGAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGDRCP*HSQSSS Trigger: GGAGGAGCTCTGGCTGTGGCAGGGGCACCTATCGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGTGCAGTCCTGGCTCCTaGTCTCTGCAGGCTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVCSPGS*SLQAPM Trigger: CATGGGAGCCTGCAGAGAGCAGGAGCCAGGACTGCA...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGAGGACCCCCACTGACTaGAGTGTGGCTACCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVRTPTD*SVATRP Trigger: AGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCT...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAAGGATCCTGAGGCCCTaGCTCCTGCTCTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVRILRP*LLLSGG Trigger: GCCTCCAGAGAGCAGGAGTCAGGGCCTCAGGATCCT...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAACTCAGGGCGATAGGTaGCCCTGCCACAGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVTQGDR*PCHSQS Trigger: GCTCTGGCTGTGGCAGGGGCACCTATCGCCCTGAGT...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCTCCCATGGCTCCTaGAGCTGTAGCTCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGSHGS*SCSSCG Trigger: GCCACAGGAGCTACAGCTGCAGGAGCCATGGGAGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCTCCTGTGGCTCCTGTaGCTCCTTTGGCTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVLLWLL*LLWLLL Trigger: CAGCAAGAGCCAAAGGAGCCACAGGAGCCACAGGAG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGTCCTTTGGCTCTTGCTaGAGATCCTGCAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVSFGSC*RSCSPG Trigger: GCCAGGACTGCAGGATCTTCAGCAAGAGCCAAAGGA...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCTCCTGTGGCTCCTaGTGCTTCTGCAGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGSCGS*CFCSSC Trigger: ACAGGAGCTGCAGAAGCAGCAGGAGCCACAGGAGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCTGACTCCTGCTCTCTaGAGGCTCCCATGGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVLTPAL*RLPWIL Trigger: AAGGATCCATGGGAGCCTCCAGAGAGCAGGAGTCAG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATCCAAGGATCCCCACTaGCTGGAGTGTGGCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVSKDPH*LECGYQ Trigger: CTGGTAGCCACACTCCAGTCAGTGGGGATCCTTGGA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGGTCTTCTGCAGTTCCTaGGTCTCCTGTGTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVVFCSS*VSCVSC Trigger: ACAGGAGACACAGGAGACGCAGGAACTGCAGAAGAC...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCAGCAGACATCATCTTaGCTGCTATGGACCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVQQTSS*LLWTQL Trigger: CAGCTGGGTCCATAGCAGCCAAGATGATGTCTGCTG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAAGGATCCCCACTGACTaGAGTGTGGCTACCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVRIPTD*SVATRP Trigger: AGGCCTGGTAGCCACACTCCAGTCAGTGGGGATCCT...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATGCTATGGACCCAGCTaGAATGCCTGCCCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVCYGPS*NACPSE Trigger: TTCACTGGGGCAGGCATTGCAGCTGGGTCCATAGCA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATACCAGGCCTCCTGCTaGAATTCCACCTCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVYQASC*NSTSIG Trigger: GCCAATGGAGGTGGAATTGCAGCAGGAGGCCTGGTA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCTACCAGGCCTCCTaGTGCAATTCCACCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGYQAS*CNSTSI Trigger: AATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATGTAGCTCCTGTGGCTaGCCCAACAGCTCCAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVCSSCG*PNSSKD Trigger: ATCCTTGGAGCTGTTGGGGCAGCCACAGGAGCTACA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGGCTCCTGTGTCTTCTaGAGTTCCTGCGTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVGSCVF*SSCVSC Trigger: ACAGGAGACGCAGGAACTGCAGAAGACACAGGAGCC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCAACAGCCACCAGGATaGTGTTGGTTATTGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVQQPPG*CWLLWR Trigger: TCTCCACAATAACCAACATCATCCTGGTGGCTGTTG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATCATCTTGGCTGCTATaGACCCAGCTGCAATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVSSWLL*TQLQCL Trigger: CAGGCATTGCAGCTGGGTCCATAGCAGCCAAGATGA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACTCCTGTGGCTCCTTTaGCTCTTGCTGAAGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVLLWLL*LLLKIL Trigger: CAGGATCTTCAGCAAGAGCCAAAGGAGCCACAGGAG...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTATTGCTTCTTACAACTTaGAGGCTCCTGTGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVLLLTT*RLLWLL Trigger: CAGGAGCCACAGGAGCCTCCAAGTTGTAAGAAGCAA...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAAGACATCATCTTGGCTaGTATGGACCCAGCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVRHHLG*YGPSCN Trigger: ATTGCAGCTGGGTCCATAGCAGCCAAGATGATGTCT...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAATTCCACCTCCATTaGCAATTGCTGCAGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVQFHLH*QLLQQT Trigger: TGTCTGCTGCAGCAATTGCCAATGGAGGTGGAATTG...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR TCA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAACAGCTCCAAGGATaGTATTGGTTGATGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLFSDISEGFEVPSFSEVQQLQG*YWLMWR Trigger: TCTCCACATCAACCAATATCATCCTTGGAGCTGTTG...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR GCA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGCCTAAATTCAAATCTTaGTTCTTACAACTTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVPKFKS*FLQLGG Trigger: GCCTCCAAGTTGTAAGAAGCAAGATTTGAATTTAGG...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 90 bp | TGCAATGCCTGCCCCAGTGAAGCCCACGGCACTCAGGGCGACAGGTaGCCCTGCCACAGCCAGAGCTCCTCCTATAGCAGCGCCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: CNACPSEAHGTQGDR*PCHSQSSSYSSAHK Trigger: TTTGTGGGCGCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTGTCGCCCTGAGTGCCGTGGGCTTCACTGGGGCAGGCATTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 90 bp | TGCAATGCCTGCCCCAGTGAAGCCCACGGCACTCAGGGCGATAGGTaGCCCTGCCACAGCCAGAGCTCCTCCTATAGCAGCGCCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: CNACPSEAHGTQGDR*PCHSQSSSYSSAHK Trigger: TTTGTGGGCGCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTATCGCCCTGAGTGCCGTGGGCTTCACTGGGGCAGGCATTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 90 bp | TGTCTCCTGTGTCTCCTGCTGCTTCTGCAGCTCCTGAGGCTCCTGTaGCTCCTGCTGCTTCTGCAGCTCCTGTGGCTCCTGTGGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CLLCLLLLLQLLRLL*LLLLLQLLWLLWLL Trigger: AAGGAGCCACAGGAGCCACAGGAGCTGCAGAAGCAGCAGGAGCCACAGGAGCCTCAGGAGCTGCAGAAGCAGCAGGAGACACAGGAGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 90 bp | AGGATGATGTTGGTTATTGTGGAGAGTCCAAGGACCCCCACTGACTaGAGTGTGGCTACCAGGCCTCCTGCTGCAATTCCACCTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RMMLVIVESPRTPTD*SVATRPPAAIPPPL Trigger: CAATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGACTCTCCACAATAACCAACATCATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CAA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGTGGCTCCTTTGGCTCTaGCTGAAGATCCTGCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVWLLWL*LKILQS Trigger: GGACTGCAGGATCTTCAGCAAGAGCCAAAGGAGCCA...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CAA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGGCCACCAGGATGATGTaGGTTATTGTGGAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVATRMM*VIVESP Trigger: TGGACTCTCCACAATAACCAACATCATCCTGGTGGC...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CAA 90 bp | TCATTATTCTCTGACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTAGCTCCTGTGGCTCCTTaGGCTCTTGCTGAAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: SLFSDISEGFEVPSFSEVAPVAP*ALAEDP Trigger: AGGATCTTCAGCAAGAGCCAAAGGAGCCACAGGAGC...TACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGTCAGAGAATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS-3UTR CAA 90 bp | ACATCAGTGAGGGTTTTGAAGTACCCTCATTCTCTGAAGTACAAAGAACCAGTGGCTCCAAGGATGATATaGGTTGATGTGGAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: TSVRVLKYPHSLKYKEPVAPRMI*VDVESP Trigger: TGGACTCTCCACATCAACCAATATCATCCTTGGAGC...CACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCTCACTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 72 bp | AGTGAAGCCCACGGCACTCAGGGCGACAGGTGCCCCTaGCACAGCCAGAGCTCCTCCTATAGCAGCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SEAHGTQGDRCP*HSQSSSYSSAH Trigger: GTGGGCGCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTGTCGCCCTGAGTGCCGTGGGCTTCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 72 bp | TGCCCCAGTGAAGCCCACGGCACTCAGGGCGACAGGTaGCCCTGCCACAGCCAGAGCTCCTCCTATAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPSEAHGTQGDR*PCHSQSSSYSS Trigger: GCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTGTCGCCCTGAGTGCCGTGGGCTTCACTGGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 72 bp | AGTGAAGCCCACGGCACTCAGGGCGATAGGTGCCCCTaGCACAGCCAGAGCTCCTCCTATAGCAGCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SEAHGTQGDRCP*HSQSSSYSSAH Trigger: GTGGGCGCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTATCGCCCTGAGTGCCGTGGGCTTCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS GCA 72 bp | TGCCCCAGTGAAGCCCACGGCACTCAGGGCGATAGGTaGCCCTGCCACAGCCAGAGCTCCTCCTATAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPSEAHGTQGDR*PCHSQSSSYSS Trigger: GCTGCTATAGGAGGAGCTCTGGCTGTGGCAGGGGCACCTATCGCCCTGAGTGCCGTGGGCTTCACTGGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS TCA 72 bp | TGGCTCCTGCAGCTCCTGCGGAGGATCCTGAGGCCCTaGCTCCTGCTCTCTGGAGGCTCCCATGGATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: WLLQLLRRILRP*LLLSGGSHGSF Trigger: GAAGGATCCATGGGAGCCTCCAGAGAGCAGGAGTCAGGGCCTCAGGATCCTCCGCAGGAGCTGCAGGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 72 bp | TTGTGGAGAGTCCAAGGACCCCCACTGACTGGAGTGTaGCTACCAGGCCTCCTGCTGCAATTCCACCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LWRVQGPPLTGV*LPGLLLQFHLH Trigger: ATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGACTCTCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 72 bp | ATGTGGAGAGTCCAAGGATCCCCACTGACTGGAGTGTaGCTACCAGGCCTCCTGCTGCAATTCCACCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: MWRVQGSPLTGV*LPGLLLQFHLH Trigger: ATGGAGGTGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGATCCTTGGACTCTCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CAA 90 bp | GCAGCTGTAGCTCCTGTGGCTGCCCCAACAGCTCCAAGGATGATATaGGTTGATGTGGAGAGTCCAAGGATCCCCACTGACTGGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: AAVAPVAAPTAPRMI*VDVESPRIPTDWSV Trigger: CACACTCCAGTCAGTGGGGATCCTTGGACTCTCCACATCAACCAATATCATCCTTGGAGCTGTTGGGGCAGCCACAGGAGCTACAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS TCA 72 bp | GATGTTGGTTATTGTGGAGAGTCCAAGGACCCCCACTaGCTGGAGTGTGGCTACCAGGCCTCCTGCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: DVGYCGESKDPH*LECGYQASCCN Trigger: ATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGACTCTCCACAATAACCAACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 72 bp | TTGGTTATTGTGGAGAGTCCAAGGACCCCCACTGACTaGAGTGTGGCTACCAGGCCTCCTGCTGCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVIVESPRTPTD*SVATRPPAAIP Trigger: TGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGGTCCTTGGACTCTCCACAATAACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CCA 72 bp | TTGGTTGATGTGGAGAGTCCAAGGATCCCCACTGACTaGAGTGTGGCTACCAGGCCTCCTGCTGCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVDVESPRIPTD*SVATRPPAAIP Trigger: TGGAATTGCAGCAGGAGGCCTGGTAGCCACACTCCAGTCAGTGGGGATCCTTGGACTCTCCACATCAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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| CDS CAA 72 bp | GCTCCTGTGGCTGCCCCAACAGCTCCAAGGATGATATaGGTTGATGTGGAGAGTCCAAGGATCCCCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: APVAAPTAPRMI*VDVESPRIPTD Trigger: GTCAGTGGGGATCCTTGGACTCTCCACATCAACCAATATCATCCTTGGAGCTGTTGGGGCAGCCACAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044687.7 |
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