Pregenerated sensors for IFI214 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070501Ensembl transcript IDs: ENSMUST00000090406.6, ENSMUST00000097463.11, ENSMUST00000139092.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATGCACTGTATATATTTATGAACCCATTGCAGCCAACATAGTTTaGGATGGTAAGGACCTTATTTGGTATGAACTTCTCCTTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: RCTVYIYEPIAANIV*DGKDLIWYELLLQD Trigger: GTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTTACCATCTCAAACTATGTTGGCTGCAATGGGTTCATAAATATATACAGTGCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR TCA 90 bp | TGGTCTCAAGATTTCCTTGACATTCTTTCACCCTATATTCAGAGGTaGGATTCTTTACTGTTGCAAGCTGTACAATGTACTCTGATCATC | + |
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Preference number: 1 (lower is better) Translates to: WSQDFLDILSPYIQR*DSLLLQAVQCTLII Trigger: GATGATCAGAGTACATTGTACAGCTTGCAACAGTAAAGAATCTCACCTCTGAATATAGGGTGAAAGAATGTCAAGGAAATCTTGAGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR TCA 90 bp | ATTACTGTGGTGTTAACATTATGGACTTCAAGAGAAGTAGGAGGTTaGCTGACCAACTTGGGTACCATAGGATTTTGTTTATTGCATAGG | + |
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Preference number: 1 (lower is better) Translates to: ITVVLTLWTSREVGG*LTNLGTIGFCLLHR Trigger: CCTATGCAATAAACAAAATCCTATGGTACCCAAGTTGGTCAGTCAACCTCCTACTTCTCTTGAAGTCCATAATGTTAACACCACAGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR TCA 90 bp | GTTAGGAAGAAATATGAAGTCAAAGTGAATAACAGGCCACATAAATaGAGATACGGAAGCATAGCAATTACTGTGGTGTTAACATTATGG | + |
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Preference number: 1 (lower is better) Translates to: VRKKYEVKVNNRPHK*RYGSIAITVVLTLW Trigger: CCATAATGTTAACACCACAGTAATTGCTATGCTTCCGTATCTTCATTTATGTGGCCTGTTATTCACTTTGACTTCATATTTCTTCCTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGATGAAACATGTTTATTaGACCTTGGTCTGCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: EASSALLEGVGYMPQAKWMKHVY*TLVCRP Trigger: GGGTCTGCAGACCAAGGTGCAATAAACATGTTTCAT...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGGAGATTCTTTACTGTTaGAAGCTGTACAATGTACTC | + |
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Preference number: 2 (lower is better) Translates to: EASSALLEGVGYMPQAKWEILYC*KLYNVL Trigger: GAGTACATTGTACAGCTTGCAACAGTAAAGAATCTC...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATATCAAACACCTTGTAGCCACGGTGGCATaGAACATCTTCTCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GKDLIWYELLLQDNIKHLVATVA*NIFSPF Trigger: GAAAGGAGAGAAGATGTTCCATGCCACCGTGGCTAC...AAGGTGTTTGATATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCGACAAATGCAAGATGTAGATCTCAGCCATaGTTTTTCTTCATCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FIAPWSADPVLKQPTNARCRSQP*FFFIWG Trigger: ACCCCAGATGAAGAAAAAGCATGGCTGAGATCTACA...TCTTGCATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCATGGAACATCTTCTCTCCTTTCATGTCATATGCAAATGGTTCTGTTACTGTAGATCTCAGCCATaGTTTTTCTTCATCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GGMEHLLSFHVICKWFCYCRSQP*FFFIWG Trigger: ACCCCAGATGAAGAAAAAGCATGGCTGAGATCTACA...GTAACAGAACCATTTGCATATGACATGAAAGGAGAGAAGATGTTCCATGCCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR-3UTR TCA 90 bp | ATCATCTCCTATCTCATAGCAAATGTAGTACCCCCTTTCTTCTTTCTTACATACGGCGCTTTTCCTCAGTaGAAGTGGGATATTCATTGG | + |
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Preference number: 2 (lower is better) Translates to: IISYLIANVVPPFFFLTYGAFPQ*KWDIHW Trigger: CCAATGAATATCCCACTTTCACTGAGGAAAAGCGCC...GTATGTAAGAAAGAAGAAAGGGGGTACTACATTTGCTATGAGATAGGAGATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR-3UTR GCA 90 bp | AACTTCTCCTTCAGGACAATATCAAACACCTTTACTCTAAAGAATTCTGTTTCCGTCTCTTCAAGTTCCTaGCTGAGTTTCTGCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: NFSFRTISNTFTLKNSVSVSSSS*LSFCFG Trigger: GCCAAAGCAGAAACTCAGGCAGGAACTTGAAGAGAC...GGAAACAGAATTCTTTAGAGTAAAGGTGTTTGATATTGTCCTGAAGGAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGAGGCCTTTGCCTACACAAATTTCCCAAGGGGTCAGAAACACTTATATTCAAGAGCATACAATTaGTTTCTGCTTTCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FTEAFAYTNFPRGQKHLYSRAYN*FLLSAL Trigger: CAGAGCAGAAAGCAGAAAGCAATTGTATGCTCTTGA...ATATAAGTGTTTCTGACCCCTTGGGAAATTTGTGTAGGCAAAGGCCTCAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR CAA 90 bp | CCTTTGCCTACACAAATTTCCCAAGGGGTCAGAAACACTTATATCTaGTACTTATCTTGTTATGGCTGCTATTTCTACCTTTCCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: PLPTQISQGVRNTYI*YLSCYGCYFYLSFA Trigger: AGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATAAGTGTTTCTGACCCCTTGGGAAATTTGTGTAGGCAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGACAATATCAAACACCTTTACTCTAAAGAATTCTGTTTCCGTAGCCACTTTGGCTTCCCTCAATaGAGGAAGCTTAAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQDNIKHLYSKEFCFRSHFGFPQ*RKLKLK Trigger: TTTCAGTTTAAGCTTCCTTCATTGAGGGAAGCCAAA...GTGGCTACGGAAACAGAATTCTTTAGAGTAAAGGTGTTTGATATTGTCCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGAGGCCTTTGCCTACACAAATTTCCCAAGGGGTCAGAAACACTTATATGTCTCAAGATTTCCTTaGCATTCTTTCACCCTATAT | + |
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Preference number: 2 (lower is better) Translates to: FTEAFAYTNFPRGQKHLYVSRFP*HSFTLY Trigger: ATATAGGGTGAAAGAATGTCAAGGAAATCTTGAGAC...ATATAAGTGTTTCTGACCCCTTGGGAAATTTGTGTAGGCAAAGGCCTCAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR CAA 90 bp | ACAAATTTCCCAAGGGGTCAGAAACACTTATATCTTGTACTTATCTaGTTATGGCTGCTATTTCTACCTTTCCTTTGCTCCTTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TNFPRGQKHLYLVLI*LWLLFLPFLCSFSP Trigger: TGGAGAAAAGGAGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATAAGTGTTTCTGACCCCTTGGGAAATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGGGTCTCAAGATTTCCTaGACATTCTTTCACCCTATA | + |
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Preference number: 3 (lower is better) Translates to: EASSALLEGVGYMPQAKWGLKIS*TFFHPI Trigger: TATAGGGTGAAAGAATGTCAAGGAAATCTTGAGACC...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR TCA 72 bp | GTTGATTTTAGGTGTTCGATTGGCGCTTTTCCTCAGTaGAAGTGGGATATTCATTGGTTCGCCATCATTTAC | + |
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Preference number: 3 (lower is better) Translates to: VDFRCSIGAFPQ*KWDIHWFAIIY Trigger: GTAAATGATGGCGAACCAATGAATATCCCACTTTCACTGAGGAAAAGCGCCAATCGAACACCTAAAATCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR TCA 72 bp | ATGAGAGAGGTAATTAACACTGCAGGAAGCCTTGACTaGGACTCATTTGTTTTAGGACAGCTTTCTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: MREVINTAGSLD*DSFVLGQLSHG Trigger: ACCATGAGAAAGCTGTCCTAAAACAAATGAGTCTCAGTCAAGGCTTCCTGCAGTGTTAATTACCTCTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR CCA 72 bp | ACTCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATaGAACATCTTCTCTCCTTTCATGTCATATGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: TLKNSVSVATVA*NIFSPFMSYAN Trigger: ATTTGCATATGACATGAAAGGAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR CCA 72 bp | AGTTTGTCTCATTTATGCACTCAAACAAGTCTAGGCTaGATTAGGCTATCTCTTGTAGCATCAAGGTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: SLSHLCTQTSLG*IRLSLVASRCV Trigger: AACACACCTTGATGCTACAAGAGATAGCCTAATCCAGCCTAGACTTGTTTGAGTGCATAAATGAGACAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATTCTTTCCTTCCCAAGTaGCTTTTGTTCAGAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: VVSQFLALMTFMLLCVVDSFLPK*LLFRML Trigger: AAGCATTCTGAACAAAAGCAACTTGGGAAGGAAAGA...ATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR TCA 72 bp | TCTGCTTTGGCTTCCCTCAATGAAGGAAGCTTAAACTaGAATAAACTCTTTCCTTCCCAAGTTGCTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SALASLNEGSLN*NKLFPSQVAFV Trigger: AACAAAAGCAACTTGGGAAGGAAAGAGTTTATTTCAGTTTAAGCTTCCTTCATTGAGGGAAGCCAAAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| 3UTR GCA 72 bp | AAATATTTCATGAAACATGTTTATTGCACCTTGGTCTaGAGACCCAGTTTTAAAGCAACCGACAAATGCAAG | + |
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Preference number: 3 (lower is better) Translates to: KYFMKHVYCTLV*RPSFKATDKCK Trigger: CTTGCATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTTTCATGAAATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
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| 3UTR TCA 72 bp | AAATATGAAGTCAAAGTGAATAACAGGCCACATAAATaGAGATACGGAAGCATAGCAATTACTGTGGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: KYEVKVNNRPHK*RYGSIAITVVL Trigger: TAACACCACAGTAATTGCTATGCTTCCGTATCTTCATTTATGTGGCCTGTTATTCACTTTGACTTCATATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: EASSALLEGVGYMPQAKWRTPSA*ALLYAV Trigger: AACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCT...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTGAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCGGTCCAGAATCCTGCTaGATGATCTTGTTGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: VSEASSALLEGVGYMPQAGPESC*MILLEF Trigger: AAACTCCAACAAGATCATCCAGCAGGATTCTGGACC...GGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTCAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | TCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATGGAACATCTTCTCTCCTTTTGTTCCTGGAGACACTaGAGGGTCCAGAATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKEFCFRSHGGMEHLLSFCSWRH*RVQNPA Trigger: AGCAGGATTCTGGACCCTCCAGTGTCTCCAGGAACA...AAAGGAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| CDS-3UTR TCA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGTTTCGGGGGACTGAATaGTGCTTTGTAATGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: EASSALLEGVGYMPQAKWFRGTE*CFVMFL Trigger: CAGAAACATTACAAAGCATCATTCAGTCCCCCGAAA...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTGCTATATGCTGTTCCTaGAGACACTGGAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAELSGCFSVPSFDDLHVAICCS*RHWRVQ Trigger: CTGGACCCTCCAGTGTCTCCAGGAACAGCATATAGC...AACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR TCA 90 bp | TTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTCAGAATCCTGCTGGATaGTCTTGTTGGAGTTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: FLALMTFMLLCVVDLSHAQNPAG*SCWSFG Trigger: CCCGAAACTCCAACAAGATCATCCAGCAGGATTCTG...AGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR GCA 90 bp | TTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCGACAAATGCAAGAGAGGGTCCAGAATCCTaGTGGATGATCTTGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FIAPWSADPVLKQPTNAREGPES*WMILLE Trigger: CTCCAACAAGATCATCCAGCAGGATTCTGGACCCTC...TCTTGCATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTTTTTCTTGTTCCTGGAGACACTaGAGGGTCCAGAATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ALMTFMLLCVVDLSHAFSCSWRH*RVQNPA Trigger: AGCAGGATTCTGGACCCTCCAGTGTCTCCAGGAACA...AGAAAAAGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | TTCATGAAACATGTTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCTGTTCCTGGAGACACTaGAGGGTCCAGAATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FMKHVYCTLVCRPSFKATCSWRH*RVQNPA Trigger: AGCAGGATTCTGGACCCTCCAGTGTCTCCAGGAACA...GGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTTTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | AAACCAATTTGGGAATTCAGCCTAAATGTGGGTGACAACATTCTACTGGCAAAGGCTATATGCTGTTCCTaGAGACACTGGAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KPIWEFSLNVGDNILLAKAICCS*RHWRVQ Trigger: CTGGACCCTCCAGTGTCTCCAGGAACAGCATATAGC...CTTTGCCAGTAGAATGTTGTCACCCACATTTAGGCTGAATTCCCAAATTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR TCA 90 bp | TTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTGGCGCTTTTCCTCAGTaGAAGTGGGATATTCATTGG | + |
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Preference number: 4 (lower is better) Translates to: FLALMTFMLLCVVDLSHAGAFPQ*KWDIHW Trigger: CCAATGAATATCCCACTTTCACTGAGGAAAAGCGCC...AGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS-3UTR CCA 90 bp | CATGTTACTGTGTGTTGTAGATCTCAGCCATGCTTTTTCTTCATCTGGGGTCAGGGTCCAGAATCCTGCTaGATGATCTTGTTGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HVTVCCRSQPCFFFIWGQGPESC*MILLEF Trigger: AAACTCCAACAAGATCATCCAGCAGGATTCTGGACC...CTGACCCCAGATGAAGAAAAAGCATGGCTGAGATCTACAACACACAGTAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | GAATTAATGCAGTTTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCGCTATATGCTGTTCCTaGAGACACTGGAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ELMQFHKGSRTEWLFLSSAICCS*RHWRVQ Trigger: CTGGACCCTCCAGTGTCTCCAGGAACAGCATATAGC...GGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAAACTGCATTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | GTCTCTGAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCTATAGTTTTATCAGTTaGACCACTCCAGCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VSEASSALLEGVGYMPQAYSFIS*TTPASF Trigger: AAAAGATGCTGGAGTGGTCCAACTGATAAAACTATA...GGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTCAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTTTTTCTAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ALMTFMLLCVVDLSHAFSRTPSA*ALLYAV Trigger: AACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCT...AGAAAAAGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | TTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTTTTTCTTCGTAGCCACGGTGGCATaGAACATCTTCTCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: FDDLHVTVCCRSQPCFFFVATVA*NIFSPF Trigger: GAAAGGAGAGAAGATGTTCCATGCCACCGTGGCTAC...GAAGAAAAAGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS-3UTR TCA 90 bp | AAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATTTTCGGGGGACTGAATaGTGCTTTGTAATGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KEAELSGCFSVPSFDDLHFRGTE*CFVMFL Trigger: CAGAAACATTACAAAGCATCATTCAGTCCCCCGAAA...ATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR TCA 90 bp | ATCATCTCCTATCTCATAGCAAATGTAGTACCCCCTTTCTTCTTTCTTACATACCAGAATCCTGCTGGATaGTCTTGTTGGAGTTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: IISYLIANVVPPFFFLTYQNPAG*SCWSFG Trigger: CCCGAAACTCCAACAAGATCATCCAGCAGGATTCTG...GTATGTAAGAAAGAAGAAAGGGGGTACTACATTTGCTATGAGATAGGAGATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| CDS-3UTR GCA 90 bp | AAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATATCAAACACCTTTACGAGGGTCCAGAATCCTaGTGGATGATCTTGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KDLIWYELLLQDNIKHLYEGPES*WMILLE Trigger: CTCCAACAAGATCATCCAGCAGGATTCTGGACCCTC...GTAAAGGTGTTTGATATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | GTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VVSQFLALMTFMLLCVVDRTPSA*ALLYAV Trigger: AACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCT...ATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
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| CDS-3UTR CCA 90 bp | AACATGTTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCGACAAATTCAGTCTCTGTCTCTTaGCTGGTGTTGCTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NMFIAPWSADPVLKQPTNSVSVS*LVLLEE Trigger: TTCTTCTAGCAACACCAGCCAAGAGACAGAGACTGA...ATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
||
| 3UTR CAA 72 bp | TTAATCCCATTTTCCAATGTCAGTTTACTGAGGCCTTaGCCTACACAAATTTCCCAAGGGGTCAGAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LIPFSNVSLLRP*PTQISQGVRNT Trigger: AGTGTTTCTGACCCCTTGGGAAATTTGTGTAGGCAAAGGCCTCAGTAAACTGACATTGGAAAATGGGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS-3UTR CCA 90 bp | GTAACCATTTTCCTCAGAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTTGGTCCAGAATCCTGCTaGATGATCTTGTTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTIFLRRFFGYIFQSLSLGPESC*MILLEF Trigger: AAACTCCAACAAGATCATCCAGCAGGATTCTGGACC...AAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| 3UTR CAA 72 bp | CCAAGGGGTCAGAAACACTTATATCTTGTACTTATCTaGTTATGGCTGCTATTTCTACCTTTCCTTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGQKHLYLVLI*LWLLFLPFLCS Trigger: GGAGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATAAGTGTTTCTGACCCCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| 3UTR CAA 72 bp | GGTGTTAACATTATGGACTTCAAGAGAAGTAGGAGGTaGACTGACCAACTTGGGTACCATAGGATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVNIMDFKRSRR*TDQLGYHRILF Trigger: AAACAAAATCCTATGGTACCCAAGTTGGTCAGTCAACCTCCTACTTCTCTTGAAGTCCATAATGTTAACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATTATAGTTTTATCAGTTaGACCACTCCAGCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEAELSGCFSVPSFDDLHYSFIS*TTPASF Trigger: AAAAGATGCTGGAGTGGTCCAACTGATAAAACTATA...ATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR TCA 90 bp | GAACTTCTCCTTCAGGACAATATCAAACACCTTTACTCTAAAGAATTCTGTTTCTTTCGGGGGACTGAATaGTGCTTTGTAATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLLQDNIKHLYSKEFCFFRGTE*CFVMFL Trigger: CAGAAACATTACAAAGCATCATTCAGTCCCCCGAAA...GAAACAGAATTCTTTAGAGTAAAGGTGTTTGATATTGTCCTGAAGGAGAAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| 3UTR CAA 72 bp | TTCTCCATGATTGGTCATCATTGCCCATTGTCGTTATaGATACTGATTATAAAGGTAACAGGATATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FSMIGHHCPLSL*ILIIKVTGYRS Trigger: GGATCTATATCCTGTTACCTTTATAATCAGTATCAATAACGACAATGGGCAATGATGACCAATCATGGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| 3UTR CAA 72 bp | ACACAAATTTCCCAAGGGGTCAGAAACACTTATATCTaGTACTTATCTTGTTATGGCTGCTATTTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQISQGVRNTYI*YLSCYGCYFYL Trigger: AAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATAAGTGTTTCTGACCCCTTGGGAAATTTGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS CCA 90 bp | AGTCTCTGTCTCTTGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTTCCTGGAGACACTGGAGGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCLLAGVARRTPSA*ALLYAVPGDTGGSR Trigger: TCTGGACCCTCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAGACAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
||
| CDS CCA 90 bp | GCTTTGATGACCTTGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTTCCTGGAGACACTGGAGGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALMTLAGVARRTPSA*ALLYAVPGDTGGSR Trigger: TCTGGACCCTCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGGTCATCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS CCA 90 bp | CTCCCTGATTCTGGTTCTGCATCTTCATTTGTGGTGGACATAGGTTaGGAAGTACTGGGTTCTTCTTGCCTTTGTCTTTTTGCTGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPDSGSASSFVVDIG*EVLGSSCLCLFAAV Trigger: AACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGATGCAGAACCAGAATCAGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCAAGTGGGCATCTTTTGGGAACTaGTCTTCCATCAAATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EASSALLEGVGYMPQAKWASFGN*SSIKSA Trigger: TGCTGATTTGATGGAAGACAAGTTCCCAAAAGATGC...CCACTTGGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS GCA 90 bp | TCTTCATTTGTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTTaGCTTTGTCTTTTTGCTGCGGTTTTCCGTTTCCCTTTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFVVDIGWEVLGSS*LCLFAAVFRFPFPF Trigger: GAAAGGGAAAGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAAGCTTCCAGTGCATTGTTAGAAGGGGTTGGTTATATGCCCCAAGCCTGCTGGATGCTATTGTaGGAGAAATTTGAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSEASSALLEGVGYMPQACWMLL*EKFEWL Trigger: AAGCCATTCAAATTTCTCCAACAATAGCATCCAGCA...GGCTTGGGGCATATAACCAACCCCTTCTAACAATGCACTGGAAGCTTCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTCTTGCCTTTGTCTTTTaGCTGCGGTTTTCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EAELSGCFSVPSFDDLHVLAFVF*LRFSVS Trigger: GGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAG...AACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | TCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATGGAACATCTTCTCTCCTTTGGGTTCTTCTTGCCTTaGTCTTTTTGCTGCGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKEFCFRSHGGMEHLLSFGFFLP*SFCCGF Trigger: AAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCC...AAAGGAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | CTGGTAACCATTTTCCTCAGAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCCACTCCAGCATCTTTaGGGAACTTGTCTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LVTIFLRRFFGYIFQSLSPLQHL*GTCLPS Trigger: TGATGGAAGACAAGTTCCCAAAAGATGCTGGAGTGG...AGACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTTACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | AAACCAATTTGGGAATTCAGCCTAAATGTGGGTGACAACATTCTACTGGCAAAGCTTGCCTTTGTCTTTTaGCTGCGGTTTTCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPIWEFSLNVGDNILLAKLAFVF*LRFSVS Trigger: GGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAG...CTTTGCCAGTAGAATGTTGTCACCCACATTTAGGCTGAATTCCCAAATTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTGGGTTCTTCTTGCCTTaGTCTTTTTGCTGCGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLALMTFMLLCVVDLSHAGFFLP*SFCCGF Trigger: AAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCC...AGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTTTAAAGCAACCGACAAATGCAAGAAACTTGTGAAGTACCTGAAGTTTCCACTCCAGCATCTTTaGGGAACTTGTCTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFKATDKCKKLVKYLKFPLQHL*GTCLPS Trigger: TGATGGAAGACAAGTTCCCAAAAGATGCTGGAGTGG...AAACTTCAGGTACTTCACAAGTTTCTTGCATTTGTCGGTTGCTTTAAAACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GAATTAATGCAGTTTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCCTTGCCTTTGTCTTTTaGCTGCGGTTTTCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELMQFHKGSRTEWLFLSSLAFVF*LRFSVS Trigger: GGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAG...GGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAAACTGCATTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | TTCATGAAACATGTTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCAGTACTGGGTTCTTCTaGCCTTTGTCTTTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FMKHVYCTLVCRPSFKATSTGFF*PLSFCC Trigger: GCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACT...GGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTTTCATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | AACATGTTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCGACAAATAGTACTGGGTTCTTCTaGCCTTTGTCTTTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NMFIAPWSADPVLKQPTNSTGFF*PLSFCC Trigger: GCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACT...ATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACTCCTTCGGGAAGCAGTaGGTAAAGATAACTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FIKEAELSGCFSVPSFDDSFGKQ*VKITEQ Trigger: TTGCTCAGTTATCTTTACCAACTGCTTCCCGAAGGA...GTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | TCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATGGAACATCTTCTCTCCTTTTATTGTTGGAGAAATTaGAATGGCTTGGTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SKEFCFRSHGGMEHLLSFYCWRN*NGLVPS Trigger: CGAAGGAACCAAGCCATTCAAATTTCTCCAACAATA...AAAGGAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | GTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATTTCAGTCTCTGTCTCTaGGCTGGTGTTGCTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVSQFLALMTFMLLCVVDFSLCL*AGVARR Trigger: TCTTCTAGCAACACCAGCCAAGAGACAGAGACTGAA...ATCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS-3UTR CAA 90 bp | GAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTACTGTGTCCTCAGAAGGTTCTTaGGGTACATTTTTCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELSGCFSVPSFDDLHVTVSSEGS*GTFFSL Trigger: GAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGA...CACAGTAACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTTTAAAGCAACCGACAAATGCAAGAAACTTGTGAAGTACCTGAAGTTTGGGTTCTTCTTGCCTTaGTCTTTTTGCTGCGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSFKATDKCKKLVKYLKFGFFLP*SFCCGF Trigger: AAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCC...AAACTTCAGGTACTTCACAAGTTTCTTGCATTTGTCGGTTGCTTTAAAACTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GAATTAATGCAGTTTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCAGTACTGGGTTCTTCTaGCCTTTGTCTTTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELMQFHKGSRTEWLFLSSSTGFF*PLSFCC Trigger: GCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACT...GGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAAACTGCATTAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTTTAAAGCAACCGACAAATGCAAGAAACTTGTGAAGTACCTGAAGTTTTCCTTCGGGAAGCAGTaGGTAAAGATAACTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSFKATDKCKKLVKYLKFSFGKQ*VKITEQ Trigger: TTGCTCAGTTATCTTTACCAACTGCTTCCCGAAGGA...AAACTTCAGGTACTTCACAAGTTTCTTGCATTTGTCGGTTGCTTTAAAACTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTTTAAAGCAACCGACAAATGCAAGAAACTTGTGAAGTACCTGAAGTTTGCATCTTTTGGGAACTaGTCTTCCATCAAATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFKATDKCKKLVKYLKFASFGN*SSIKSA Trigger: TGCTGATTTGATGGAAGACAAGTTCCCAAAAGATGC...AAACTTCAGGTACTTCACAAGTTTCTTGCATTTGTCGGTTGCTTTAAAACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTAAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATATCAAACACGCATCTTTTGGGAACTaGTCTTCCATCAAATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGKDLIWYELLLQDNIKHASFGN*SSIKSA Trigger: TGCTGATTTGATGGAAGACAAGTTCCCAAAAGATGC...GTGTTTGATATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTTACCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | AGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATATCAAACACCTTTACTTCCTTCGGGAAGCAGTaGGTAAAGATAACTGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RTLFGMNFSFRTISNTFTSFGKQ*VKITEQ Trigger: TTGCTCAGTTATCTTTACCAACTGCTTCCCGAAGGA...AGTAAAGGTGTTTGATATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | TTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCTAGCTTTGATGACTATTGTTGGAGAAATTaGAATGGCTTGGTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FIKEAELSGCFSVPSFDDYCWRN*NGLVPS Trigger: CGAAGGAACCAAGCCATTCAAATTTCTCCAACAATA...GTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | AACATGTTTATTGCACCTTGGTCTGCAGACCCAGTTTTAAAGCAACCGACAAATTATTGTTGGAGAAATTaGAATGGCTTGGTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NMFIAPWSADPVLKQPTNYCWRN*NGLVPS Trigger: CGAAGGAACCAAGCCATTCAAATTTCTCCAACAATA...ATTTGTCGGTTGCTTTAAAACTGGGTCTGCAGACCAAGGTGCAATAAACATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGTTTCTCAGTTCCTAGCTTTGATGACCTTCATGTTACTGTGTGTTGTAGATGCTGGATGCTATTGTaGGAGAAATTTGAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCFSVPSFDDLHVTVCCRCWMLL*EKFEWL Trigger: AAGCCATTCAAATTTCTCCAACAATAGCATCCAGCA...TCTACAACACACAGTAACATGAAGGTCATCAAAGCTAGGAACTGAGAAACAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | GAATTAATGCAGTTTCATAAAGGAAGCAGAACTGAGTGGTTGTTTCTCAGTTCCCACTGCTGGATGCTATaGTTGGAGAAATTTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ELMQFHKGSRTEWLFLSSHCWML*LEKFEW Trigger: CCATTCAAATTTCTCCAACAATAGCATCCAGCAGTG...GGAACTGAGAAACAACCACTCAGTTCTGCTTCCTTTATGAAACTGCATTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGACAATATCAAACACCTTTACTCTAAAGAATTCTGTTTCCGTAGCCACCACTGCTGGATGCTATaGTTGGAGAAATTTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LQDNIKHLYSKEFCFRSHHCWML*LEKFEW Trigger: CCATTCAAATTTCTCCAACAATAGCATCCAGCAGTG...GTGGCTACGGAAACAGAATTCTTTAGAGTAAAGGTGTTTGATATTGTCCTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTTTAAAGCAACCGACAAATGCAAGAAACTTGTGAAGTACCTGAAGTTTCACTGCTGGATGCTATaGTTGGAGAAATTTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFKATDKCKKLVKYLKFHCWML*LEKFEW Trigger: CCATTCAAATTTCTCCAACAATAGCATCCAGCAGTG...AAACTTCAGGTACTTCACAAGTTTCTTGCATTTGTCGGTTGCTTTAAAACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000139092.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATGACCTTCATGTTACTGTGTGTTGTAGATCTCAGCCATGCTTTTTCTTCTGCTGGATGCTATTGTaGGAGAAATTTGAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FDDLHVTVCCRSQPCFFFCWMLL*EKFEWL Trigger: AAGCCATTCAAATTTCTCCAACAATAGCATCCAGCA...GAAGAAAAAGCATGGCTGAGATCTACAACACACAGTAACATGAAGGTCATCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 |
||
| CDS GCA 72 bp | CTGGTGTTGCTAGAAGAACTCCAAGTGCCTGGGCACTaGTATATGCTGTTCCTGGAGACACTGGAGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVLLEELQVPGH*YMLFLETLEGP Trigger: TGGACCCTCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
||
| CDS TCA 72 bp | TCCTGGAGACACTGGAGGGTCCAGAATCCTGCTGGATaGTCTTGTTGGAGTTTCGGGGGACTGAATGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWRHWRVQNPAG*SCWSFGGLNDA Trigger: AGCATCATTCAGTCCCCCGAAACTCCAACAAGATCATCCAGCAGGATTCTGGACCCTCCAGTGTCTCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
||
| CDS GCA 72 bp | ATGCTGTTCCTGGAGACACTGGAGGGTCCAGAATCCTaGTGGATGATCTTGTTGGAGTTTCGGGGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MLFLETLEGPES*WMILLEFRGTE Trigger: TTCAGTCCCCCGAAACTCCAACAAGATCATCCAGCAGGATTCTGGACCCTCCAGTGTCTCCAGGAACAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
||
| CDS CCA 72 bp | CACTTGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTTCCTGGAGACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLAGVARRTPSA*ALLYAVPGDTG Trigger: TCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097463.11 |
||
| CDS CCA 72 bp | CTCTTGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTTCCTGGAGACACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLAGVARRTPSA*ALLYAVPGDTG Trigger: TCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS CCA 72 bp | ACCTTGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTaGGCACTGCTATATGCTGTTCCTGGAGACACTGGA | + |
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Preference number: 6 (lower is better) Translates to: TLAGVARRTPSA*ALLYAVPGDTG Trigger: TCCAGTGTCTCCAGGAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139092.8 |
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| CDS CAA 72 bp | TGGGTACATTTTTCAGTCTCTGTCTCTTGGCTGGTGTaGCTAGAAGAACTCCAAGTGCCTGGGCACTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: WVHFSVSVSWLV*LEELQVPGHCY Trigger: ATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAGACAGAGACTGAAAAATGTACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS CAA 90 bp | TTTCTGAAGATCTGCTGCTGGTCTGACCACTGCTGGATGCTATTGTaGGAGAAATTTGAATGGCTTGGTTCCTTCGGGAAGCAGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: FLKICCWSDHCWMLL*EKFEWLGSFGKQLV Trigger: TACCAACTGCTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGATCTTCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS CAA 90 bp | ATGTTTCTGAAGATCTGCTGCTGGTCTGACCACTGCTGGATGCTATaGTTGGAGAAATTTGAATGGCTTGGTTCCTTCGGGAAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MFLKICCWSDHCWML*LEKFEWLGSFGKQL Trigger: CAACTGCTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGATCTTCAGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS CAA 90 bp | AAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTTGGCTGGTGTaGCTAGAAGAACTCCAAGTGCCTGGGCACTGCTATATGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KVLWVHFSVSVSWLV*LEELQVPGHCYMLF Trigger: GAACAGCATATAGCAGTGCCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS CCA 72 bp | AAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTTaGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KVLWVHFSVSVS*LVLLEELQVPG Trigger: CCCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS CAA 72 bp | GAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTaGGCTGGTGTTGCTAGAAGAACTCCAAGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: EGSLGTFFSLCL*AGVARRTPSAW Trigger: CCAGGCACTTGGAGTTCTTCTAGCAACACCAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS CAA 90 bp | CTATTGTTGGAGAAATTTGAATGGCTTGGTTCCTTCGGGAAGCAGTaGGTAAAGATAACTGAGCAACCTGTGTGTCAGGTGTACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLLEKFEWLGSFGKQ*VKITEQPVCQVYSS Trigger: GGAGGAGTACACCTGACACACAGGTTGCTCAGTTATCTTTACCAACTGCTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS CAA 90 bp | ATTTGTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTTGCCTTaGTCTTTTTGCTGCGGTTTTCCGTTTCCCTTTCCCTTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ICGGHRLGSTGFFLP*SFCCGFPFPFPFPF Trigger: AAAAGGAAAGGGAAAGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS CAA 90 bp | ATCTTCATTTGTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTaGCCTTTGTCTTTTTGCTGCGGTTTTCCGTTTCCCTTTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IFICGGHRLGSTGFF*PLSFCCGFPFPFPF Trigger: AAAGGGAAAGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS TCA 72 bp | ATCCTGCTGGATGATCTTGTTGGAGTTTCGGGGGACTaGATGATGCTTTGTAATGTTTCTGAAGATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ILLDDLVGVSGD*MMLCNVSEDLL Trigger: CAGCAGATCTTCAGAAACATTACAAAGCATCATTCAGTCCCCCGAAACTCCAACAAGATCATCCAGCAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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| CDS CCA 72 bp | AACCTTGCTGGTAACCATTTTCCTCAGAAGGTTCTTTaGGTACATTTTTCAGTCTCTGTCTCTTGGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: NLAGNHFPQKVL*VHFSVSVSWLV Trigger: CACCAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTTACCAGCAAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090406.6 |
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| CDS GCA 72 bp | TTGAGTTTATTAGCAATGTCTCCAAGTCCTGGAATCTaGTTATATAGTTTTATCAGTTGGACCACTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSLLAMSPSPGI*LYSFISWTTPA Trigger: TGCTGGAGTGGTCCAACTGATAAAACTATATAAGCAGATTCCAGGACTTGGAGACATTGCTAATAAACTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090406.6 ENSMUST00000097463.11 ENSMUST00000139092.8 |
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