Pregenerated sensors for IFI213 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073491Ensembl transcript IDs: ENSMUST00000097462.9, ENSMUST00000150649.9, ENSMUST00000180215.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGATGCCAAGTCTCCAGGACATTAAGTTTCCATGAAACTTTTTaGATTGTCACTGTTTCTAAGCTCTTGGGCCTGCCATGCAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: QGCQVSRTLSFHETF*IVTVSKLLGLPCSL Trigger: AAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAGTGACAATGCAAAAAGTTTCATGGAAACTTAATGTCCTGGAGACTTGGCATCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR CCA 90 bp | AAGAAGGCATACAGATCCATTCACCAACTAACACAAGAACAAGTTTaGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAG | + |
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Preference number: 1 (lower is better) Translates to: KKAYRSIHQLTQEQV*SIHATGMPSLQDIK Trigger: CTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTTGTTCTTGTGTTAGTTGGTGAATGGATCTGTATGCCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR TCA 90 bp | ACTTTTGCAAATGTTCTCAAAAGGAAGAATGAGGGATTTGAGAGGTaGCTTATGGGAGAAGAGTATTTGCTGCACATACATGAGGACCTA | + |
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Preference number: 1 (lower is better) Translates to: TFANVLKRKNEGFER*LMGEEYLLHIHEDL Trigger: TAGGTCCTCATGTATGTGCAGCAAATACTCTTCTCCCATAAGTCACCTCTCAAATCCCTCATTCTTCCTTTTGAGAACATTTGCAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 90 bp | CTGTATCTTAAAGGAGTAAGGCAGAGACTGATTAAGCAGAGTATTTaGAGTCCTCCTTTGACATCAGTGATATCATGCACACACATGTAT | + |
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Preference number: 1 (lower is better) Translates to: LYLKGVRQRLIKQSI*SPPLTSVISCTHMY Trigger: ATACATGTGTGTGCATGATATCACTGATGTCAAAGGAGGACTTCAAATACTCTGCTTAATCAGTCTCTGCCTTACTCCTTTAAGATACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 90 bp | AGTTTAACGTCCTTTAACAGGCTTTGGAAGGTCATGTCCTTAAACTaGATGCTACTTTTGCAAATGTTCTCAAAAGGAAGAATGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SLTSFNRLWKVMSLN*MLLLQMFSKGRMRD Trigger: ATCCCTCATTCTTCCTTTTGAGAACATTTGCAAAAGTAGCATTCAGTTTAAGGACATGACCTTCCAAAGCCTGTTAAAGGACGTTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGAGATTGGATGATAAGCTGCTTCAAGATTTTTATCATTGTGAAGAAGTCAGACGGGATGGTCTCTaGGGCTTGCTGCCTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGRLDDKLLQDFYHCEEVRRDGL*GLLPTS Trigger: GCTGGTAGGCAGCAAGCCTCAGAGACCATCCCGTCT...GACTTCTTCACAATGATAAAAATCTTGAAGCAGCTTATCATCCAATCTCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGATTTCACACCCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAATTGCTAGCTCCTATCTaGCAAACTGTGAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VRISHPSHNLCYFSEPCELLAPI*QTVRCQ Trigger: CTGGCATCTCACAGTTTGCCAGATAGGAGCTAGCAA...TTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGGGTGTGAAATCCTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR-3UTR GCA 90 bp | AACTGCACTTTGACCATACAAGAGCATAGGATCCTCTTGTCCAGGAACAGAAACGAGAAGAGTATTTGCTaGACATACATGAGGACCTAT | + |
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Preference number: 2 (lower is better) Translates to: NCTLTIQEHRILLSRNRNEKSIC*TYMRTY Trigger: ATAGGTCCTCATGTATGTGCAGCAAATACTCTTCTC...GTTTCTGTTCCTGGACAAGAGGATCCTATGCTCTTGTATGGTCAAAGTGCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGCTGTTTCTAAGCTCTTaGGCCTGCCATGCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMLFLSS*ACHAVF Trigger: GAAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAG...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR-3UTR TCA 90 bp | AGATTGGATGATAAGCTGCTTCAAGATTTTTATCATTGTGAAGAAGTCTGGAGTTTGGGAACTGCACTTTaGCCATACAAGAGCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLDDKLLQDFYHCEEVWSLGTAL*PYKSIG Trigger: TCCTATGCTCTTGTATGGTCAAAGTGCAGTTCCCAA...ACTCCAGACTTCTTCACAATGATAAAAATCTTGAAGCAGCTTATCATCCAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR TCA 90 bp | AGAATGAATAGAGTCAATATTTCTGCCAATCAAATTGTAGCTCACCTGGTAGGTACAAAAGCTTCTCACTaGGGTCTTCATGGAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: RMNRVNISANQIVAHLVGTKASH*GLHGSI Trigger: AATGCTTCCATGAAGACCTCAGTGAGAAGCTTTTGT...ACCTACCAGGTGAGCTACAATTTGATTGGCAGAAATATTGACTCTATTCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCTCTTTTGTGTATTAGAGGTTGAACTTGGGATCTTTTGTGTGCCAAGTACTGGCTGCTACGTTTaGAAATGTTCTCAAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLLFCVLEVELGIFCVPSTGCYV*KCSQKE Trigger: TTCCTTTTGAGAACATTTCCAAACGTAGCAGCCAGT...ACTTGGCACACAAAAGATCCCAAGTTCAACCTCTAATACACAAAAGAGAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR GCA 72 bp | CTCGTGAAAGGCATAGACGGGATGGTCTCTGAGGCTTaGTGCCTACCAGCACAGCTCCAGGTTCAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LVKGIDGMVSEA*CLPAQLQVQRE Trigger: CTCTCTCTGAACCTGGAGCTGTGCTGGTAGGCAGCAAGCCTCAGAGACCATCCCGTCTATGCCTTTCACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR GCA 72 bp | GTGAAAGGCATAGACGGGATGGTCTCTGAGGCTTGCTaGCTACCAGCACAGCTCCAGGTTCAGAGAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: VKGIDGMVSEAC*LPAQLQVQRET Trigger: AGTCTCTCTCTGAACCTGGAGCTGTGCTGGTAGGCAGCAAGCCTCAGAGACCATCCCGTCTATGCCTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | GCCCAGGGTCAGCTCCAGGACTGCCTAGGATATTGGTaGAGGCCAGGAAGCAAAGTTCAACCTGATTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: AQGQLQDCLGYW*RPGSKVQPDLG Trigger: ACCTAAATCAGGTTGAACTTTGCTTCCTGGCCTTCACCAATATCCTAGGCAGTCCTGGAGCTGACCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR GCA 72 bp | AGGAGAGATGAAGTGCTTTGCTTTCACAGGTCCAGTTaGAAAGGACTGTGCAGATTTGCTGACCAGAATCAC | + |
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Preference number: 3 (lower is better) Translates to: RRDEVLCFHRSS*KGLCRFADQNH Trigger: GTGATTCTGGTCAGCAAATCTGCACAGTCCTTTGCAACTGGACCTGTGAAAGCAAAGCACTTCATCTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CAA 90 bp | AACTGCACTTTGACCATACAAGAGCATAGGATCCTCTTGTCCAGGAACAGAAACGGAAGAATGAGGGATTaGAGAGGTGACTTATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: NCTLTIQEHRILLSRNRNGRMRD*RGDLWE Trigger: CTCCCATAAGTCACCTCTCAAATCCCTCATTCTTCC...GTTTCTGTTCCTGGACAAGAGGATCCTATGCTCTTGTATGGTCAAAGTGCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CAA 90 bp | CATATCCCTGTCAAGAACAAAAGCTTCTCACTGAGGTCTTCATGGAAGCATTTGAGTCACATGATGGAATaGTGCAGGCTTCAGGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: HIPVKNKSFSLRSSWKHLSHMME*CRLQGF Trigger: AAACCCCTGAAGCCTGCACAATTCCATCATGTGACT...CAAATGCTTCCATGAAGACCTCAGTGAGAAGCTTTTGTTCTTGACAGGGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | TGCACCAGAGGGGTTCTGCTCTTGCTGACCTTTTCATaGATAATGCAATACTGTAGTTCCTCCTTAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: CTRGVLLLLTFS*IMQYCSSSLNH Trigger: GTGGTTTAAGGAGGAACTACAGTATTGCATTATTCATGAAAAGGTCAGCAAGAGCAGAACCCCTCTGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR GCA 72 bp | AGGGATTTGAGAGGTGACTTATGGGAGAAGAGTATTTaGTGCACATACATGAGGACCTATGATCAGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: RDLRGDLWEKSI*CTYMRTYDQIP Trigger: TGGGATCTGATCATAGGTCCTCATGTATGTGCAGCAAATACTCTTCTCCCATAAGTCACCTCTCAAATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR GCA 72 bp | CTTTTTGCATTGTCACTGTTTCTAAGCTCTTGGGCCTaGCATGCAGTCTTCACTAGAGTTGTTGTAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: LFALSLFLSSWA*HAVFTRVVVAF Trigger: GAATGCTACAACAACTCTAGTGAAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAGTGACAATGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR GCA 72 bp | ACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTTaGACCAGAGGGGTTCTGCTCTTGCTGACCTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: TIYAISLSLVKA*TRGVLLLLTFS Trigger: TGAAAAGGTCAGCAAGAGCAGAACCCCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR GCA 72 bp | GATTTGAGAGGTGACTTATGGGAGAAGAGTATTTGCTaGACATACATGAGGACCTATGATCAGATCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: DLRGDLWEKSIC*TYMRTYDQIPV Trigger: TACTGGGATCTGATCATAGGTCCTCATGTATGTGCAGCAAATACTCTTCTCCCATAAGTCACCTCTCAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR CCA 72 bp | ATGAAACTTTTTGCATTGTCACTGTTTCTAAGCTCTTaGGCCTGCCATGCAGTCTTCACTAGAGTTGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: MKLFALSLFLSS*ACHAVFTRVVV Trigger: TACAACAACTCTAGTGAAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAGTGACAATGCAAAAAGTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR TCA 72 bp | AAAGGAGTAAGGCAGAGACTGATTAAGCAGAGTATTTaGAGTCCTCCTTTGACATCAGTGATATCATGCACA | + |
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Preference number: 3 (lower is better) Translates to: KGVRQRLIKQSI*SPPLTSVISCT Trigger: TGTGCATGATATCACTGATGTCAAAGGAGGACTTCAAATACTCTGCTTAATCAGTCTCTGCCTTACTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | AAGTACAAGTTGAGTTTAATGTCCTTTTACAGGCTGTaGAAGGCCATATCCTTAAACTGGCTGCTACGTTTG | + |
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Preference number: 3 (lower is better) Translates to: KYKLSLMSFYRL*KAISLNWLLRL Trigger: CAAACGTAGCAGCCAGTTTAAGGATATGGCCTTTCACAGCCTGTAAAAGGACATTAAACTCAACTTGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | TCTAATGGCTCATCTTCTCTTTTGTGTATTAGAGGTTaGACTTGGGATCTTTTGTGTGCCAAGTTAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SNGSSSLLCIRG*TWDLLCAKLGS Trigger: GGAACCTAACTTGGCACACAAAAGATCCCAAGTTCAACCTCTAATACACAAAAGAGAAGATGAGCCATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR GCA 72 bp | GGACTGTGCAGATTTGCTGACCAGAATCACATCCAATaGATGATTTGCCAGTGTAATTGTAAAATATGGTCA | + |
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Preference number: 3 (lower is better) Translates to: GLCRFADQNHIQ*MICQCNCKIWS Trigger: TGACCATATTTTACAATTACACTGGCAAATCATGCATTGGATGTGATTCTGGTCAGCAAATCTGCACAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR-3UTR CAA 90 bp | AGTGGGAGATTGGATGATAAGCTGCTTCAAGATTTTTATCATTGTGAAGAAGTCAACTGGCTGCTACGTTaGGAAATGTTCTCAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SGRLDDKLLQDFYHCEEVNWLLR*EMFSKG Trigger: TCCTTTTGAGAACATTTCCAAACGTAGCAGCCAGTT...GACTTCTTCACAATGATAAAAATCTTGAAGCAGCTTATCATCCAATCTCCCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | AATGTTCTCAAAAGGAAGAATGAGGGATTTGAGAGGTaGCTTATGGGAGAAGAGTATTTGCTGCACATACAT | + |
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Preference number: 3 (lower is better) Translates to: NVLKRKNEGFER*LMGEEYLLHIH Trigger: ATGTATGTGCAGCAAATACTCTTCTCCCATAAGTCACCTCTCAAATCCCTCATTCTTCCTTTTGAGAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| 3UTR TCA 72 bp | TCCTTTAACAGGCTTTGGAAGGTCATGTCCTTAAACTaGATGCTACTTTTGCAAATGTTCTCAAAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SFNRLWKVMSLN*MLLLQMFSKGR Trigger: TCTTCCTTTTGAGAACATTTGCAAAAGTAGCATTCAGTTTAAGGACATGACCTTCCAAAGCCTGTTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTTGCACCAGAGGCGGGACAGGTGGGGCTaGTCTGATAAGCCTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSHNLCYFSEPCESLHQRRDRWG*SDKPVH Trigger: ATGGACAGGCTTATCAGATCAGCCCCACCTGTCCCG...CCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR CCA 90 bp | AAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCTGGTCTGGATGCTGCTaGAGGCTGTCACTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KFGAFMLQGCQVSRTLSFWSGCC*RLSLEA Trigger: TGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCA...GAAACTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR CCA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAACCAGACATGTCTGGATaGTCTGGATGCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSNQAALLSVCREISIGQPDMSG*SGCCWR Trigger: CCTCCAGCAGCATCCAGACCATCCAGACATGTCTGG...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR TCA 90 bp | AAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCGTTGCTGCAGACACCTaGGGACTATTACAGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: KFGAFMLQGCQVSRTLSFVAADT*GLLQPW Trigger: CCACGGCTGTAATAGTCCTCAGGTGTCTGCAGCAAC...GAAACTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR TCA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAAAGGATGGCATCGGGTTaGCTCTCCTTGCTGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSNQAALLSVCREISIGQRMASG*LSLLLS Trigger: AGACAACAGCAAGGAGAGTCAACCCGATGCCATCCT...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR GCA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAAGAAACTGCTGGATACTaGTGCTGTAGGCACCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSNQAALLSVCREISIGQETAGY*CCRHLR Trigger: CCTCAGGTGCCTACAGCAGCAGTATCCAGCAGTTTC...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR TCA 90 bp | GATCAGACCTATCTAAAGGCAGCTATTGACAGGAGCCAGGTGAGGATTTCACACGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTAC | + |
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Preference number: 4 (lower is better) Translates to: DQTYLKAAIDRSQVRISHGGIWC*RTLRCY Trigger: GTAACATCTCAGGGTTCTTCAGCACCATATTCCACC...GTGTGAAATCCTCACCTGGCTCCTGTCAATAGCTGCCTTTAGATAGGTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR TCA 90 bp | GATCAGACCTATCTAAAGGCAGCTATTGACAGGAGCCAGGTGAGGATTTCACACGAGTTTGAACACCACTaGGTAACCTTGCTGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DQTYLKAAIDRSQVRISHEFEHH*VTLLRS Trigger: TGACCTCAGCAAGGTTACTCAGTGGTGTTCAAACTC...GTGTGAAATCCTCACCTGGCTCCTGTCAATAGCTGCCTTTAGATAGGTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR GCA 90 bp | GTGAGGATTTCACACCCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAAGGATGGTCTGGATGCTaGTGGAGGCTGTCACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VRISHPSHNLCYFSEPCEGWSGC*WRLSLE Trigger: CTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCC...TTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGGGTGTGAAATCCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTTGCACCAGAGGGTTGCCAGACATGTCTaGATGGTCTGGATGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSHNLCYFSEPCESLHQRVARHV*MVWMLL Trigger: CAGCAGCATCCAGACCATCCAGACATGTCTGGCAAC...CCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR CCA 90 bp | AAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCCTTGAGTGGTGTTGCTaGAGACAGAGACATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KFGAFMLQGCQVSRTLSFLEWCC*RQRHGR Trigger: CCTGCCATGTCTCTGTCTCCAGCAACACCACTCAAG...GAAACTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR TCA 90 bp | GATCAGACCTATCTAAAGGCAGCTATTGACAGGAGCCAGGTGAGGATTTCACACGGCATCAAAGGAGTTTaGACACCACTGAGTAACCTT | + |
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Preference number: 4 (lower is better) Translates to: DQTYLKAAIDRSQVRISHGIKGV*TPLSNL Trigger: AAGGTTACTCAGTGGTGTTCAAACTCCTTTGATGCC...GTGTGAAATCCTCACCTGGCTCCTGTCAATAGCTGCCTTTAGATAGGTCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR GCA 90 bp | TGGCAAACTGTGAGATGCCAGATTACTAACTGTAAACACTGGGGCATTTCATCTGCAAGATCTGGACACTaGTGGGCACTGGAGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: WQTVRCQITNCKHWGISSARSGH*WALESH Trigger: ATGTGACTCCAGTGCCCAGCAGTGTCCAGATCTTGC...AGATGAAATGCCCCAGTGTTTACAGTTAGTAATCTGGCATCTCACAGTTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGGCCGTGGGCCATGGCTaGTGGGTAGAGTTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMAVGHG*WVELQG Trigger: ACCTTGCAACTCTACCCAGCAGCCATGGCCCACGGC...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR GCA 90 bp | AAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCACTTCCAGGAAATGTTaGTGGAGTCACCCAAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: KFGAFMLQGCQVSRTLSFTSRKC*WSHPRV Trigger: AACCCTTGGGTGACTCCAGCAACATTTCCTGGAAGT...GAAACTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS-3UTR CCA 90 bp | GAACAAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTCCAGGAAATGTTGCTaGAGTCACCCAAGGGTTATT | + |
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Preference number: 4 (lower is better) Translates to: EQVWSIHATGMPSLQDIKSRKCC*SHPRVI Trigger: AATAACCCTTGGGTGACTCCAGCAACATTTCCTGGA...CTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| 3UTR CAA 72 bp | CACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTaGCACCAGAGGGGTTCTGCTCTTGCTGACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNLCYFSEPCES*HQRGSALADLF Trigger: GAAAAGGTCAGCAAGAGCAGAACCCCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | GCATTGTCACTGTTTCTAAGCTCTTGGGCCTGCCATGCAGTCTTCACTAGAGTTAGAGTCTCTTCATTTTaGTTGCAAGTGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSLFLSSWACHAVFTRVRVSSF*LQVAVL Trigger: AAGAACAGCCACTTGCAACCAAAATGAAGAGACTCT...AACTCTAGTGAAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAGTGACAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGTGCCTTGAGTGGTGTTaGTGGAGACAGAGACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMCLEWC*WRQRHG Trigger: GCCATGTCTCTGTCTCCAGCAACACCACTCAAGGCA...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGAGATCTGGACACTGCTaGGCACTGGAGTCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMRSGHC*ALESHE Trigger: CTCATGTGACTCCAGTGCCCAGCAGTGTCCAGATCT...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTTGGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCGTCCATAATCCAGACTaGGGATTCTGCATTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KFGAFMLQGCQVSRTLSFVHNPD*GFCISL Trigger: CAATGAAATGCAGAATCCCCAGTCTGGATTATGGAC...GAAACTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAAGCATTAAAGCAAGCATaGCCAAAAACATTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSNQAALLSVCREISIGQALKQA*PKTLTL Trigger: CAGAGTCAATGTTTTTGGCCATGCTTGCTTTAATGC...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR TCA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATGTTGTTGGAAATCTCTaGGGAGTCAGGGGTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPINKTILKEGIQIHVVGNL*GVRGSP Trigger: GGGTGAACCCCTGACTCCTCAGAGATTTCCAACAAC...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| 3UTR CAA 72 bp | ACACTTCATGCACATCACTACTCTATGCACATGTCCTaGGTGGGAGAACACCTACATTTAGAAAGTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLHAHHYSMHMS*VGEHLHLESTS Trigger: ACTTGTACTTTCTAAATGTAGGTGTTCTCCCACCAAGGACATGTGCATAGAGTAGTGATGTGCATGAAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
||
| CDS-3UTR GCA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATTCCTTCTCTTCTCTGTaGAGCTTTGTGTGCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPINKTILKEGIQIHSFSSL*SFVCGT Trigger: TGTCCCGCACACAAAGCTGCACAGAGAAGAGAAGGA...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGTTCATTTGCAAGATCTaGACACTGCTGGGCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMFICKI*TLLGTG Trigger: TCCAGTGCCCAGCAGTGTCCAGATCTTGCAAATGAA...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGTCAAGAACAAAAGCTTCTCACTGAGGTCTTCATGGAAGCATTTGATAGAAGAACAATTTGCTTaGAGTAATTCACCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPVKNKSFSLRSSWKHLIEEQFA*SNSPSL Trigger: GAGAGATGGTGAATTACTGCAAGCAAATTGTTCTTC...TATCAAATGCTTCCATGAAGACCTCAGTGAGAAGCTTTTGTTCTTGACAGGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTAGGGAAATCTCCATTGGTCAATAGAACTCAACTTTCTTCAAAAATGATCTCAGAAGAACTCTaGATTAAAGCAAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSVGKSPLVNRTQLSSKMISEEL*IKASMA Trigger: GGCCATGCTTGCTTTAATGCAGAGTTCTTCTGAGAT...CATTTTTGAAGAAAGTTGAGTTCTATTGACCAATGGAGATTTCCCTACAGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR GCA 90 bp | ATTATGAATATGTTCACCCTTCATTTTGTTTCAGCTAGGTCCTTGGCACACATGGAAGAACAATTTGCTTaGAGTAATTCACCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMNMFTLHFVSARSLAHMEEQFA*SNSPSL Trigger: GAGAGATGGTGAATTACTGCAAGCAAATTGTTCTTC...CATGTGTGCCAAGGACCTAGCTGAAACAAAATGAAGGGTGAACATATTCATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097462.9 ENSMUST00000180215.2 |
||
| CDS-3UTR GCA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATTCTCTTCATTTTGGTTaGAAGTGGCTGTTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPINKTILKEGIQIHSLHFG*KWLFFL Trigger: AAGGAAGAACAGCCACTTGCAACCAAAATGAAGAGA...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR GCA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATGAAGAACAATTTGCTTaGAGTAATTCACCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPINKTILKEGIQIHEEQFA*SNSPSL Trigger: GAGAGATGGTGAATTACTGCAAGCAAATTGTTCTTC...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CCA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATCATTTTGGTTGCAAGTaGCTGTTCTTCCTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPINKTILKEGIQIHHFGCK*LFFLLF Trigger: AAAAAGAAGGAAGAACAGCCACTTGCAACCAAAATG...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS TCA 90 bp | TCCAGGGGTGTCTGGAGACTGCTGGAGGCTGTTGTTGGAAATCTCTaGGGAGTCAGGGGTTCACCCTCAGCCTGGCTTGTGCTGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGVWRLLEAVVGNL*GVRGSPSAWLVLVA Trigger: AGCAACCAGCACAAGCCAGGCTGAGGGTGAACCCCTGACTCCTCAGAGATTTCCAACAACAGCCTCCAGCAGTCTCCAGACACCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | GAAGTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGGATGCTGCTaGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVLRLPDMSGWSGCC*RLSLEAPEKICHRW Trigger: CCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS GCA 90 bp | AAGGAAGTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGGATGCTaGTGGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEVLRLPDMSGWSGC*WRLSLEAPEKICHR Trigger: CCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | CAGCTGGTCTGTAGCACCCAGATGAGATCCTATCCTTGCCTTGAGTaGTGTTGCTGGAGACAGAGACATGGCAGGAAAACTCCTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLVCSTQMRSYPCLE*CCWRQRHGRKTPGH Trigger: GTGCCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAACACCACTCAAGGCAAGGATAGGATCTCATCTGGGTGCTACAGACCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS TCA 90 bp | CTTCACGAGTCAGCTTCTTTAGTTGTCCCCAGGATGGCATCGGGTTaGCTCTCCTTGCTGTTGTCTGTGGTGGAGATAGGGAGAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHESASLVVPRMASG*LSLLLSVVEIGRVS Trigger: AGAGACTCTCCCTATCTCCACCACAGACAACAGCAAGGAGAGTCAACCCGATGCCATCCTGGGGACAACTAAAGAAGCTGACTCGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS GCA 90 bp | GCTGGATACTGCTGCTGTAGGCACCTGAGGACAATTATGACCACTTaGCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGYCCCRHLRTIMTT*LYCLSHLSGLDTAG Trigger: CCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTACAGCAGCAGTATCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | TGCTGGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTaGAATATGGTGCTGAAGAACCCTGAGATGTTACCAATATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWRLSLEAPEKICHR*NMVLKNPEMLPIWW Trigger: CCACCATATTGGTAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTTGCACCAGAGGCTTCTCTGTGCAGCTTaGTGTGCGGGACAGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYFSEPCESLHQRLLCAA*CAGQVG Trigger: CCCCACCTGTCCCGCACACAAAGCTGCACAGAGAAG...CCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS TCA 90 bp | TGTTTTTGGAGACTTCAGAGTAGCTTGGTGACTACAAGGAAGTGTTaGGGTTGCCAGACATGTCTGGATGGTCTGGATGCTGCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CFWRLQSSLVTTRKC*GCQTCLDGLDAAGG Trigger: GCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTTGTAGTCACCAAGCTACTCTGAAGTCTCCAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | TGCTGTATACTGTTGCTGCAGACATCTGAGGACTATTACAACCACTaGTCATTTTTGCTGGGGTTAGTCGAAAGGTCTGGGCACGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCILLLQTSEDYYNH*SFLLGLVERSGHGW Trigger: CCAGCCGTGCCCAGACCTTTCGACTAACCCCAGCAAAAATGACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAACACTTCCAGGAAATGTaGCTGGAGTCACCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSNQAALLSVCREISIGQHFQEM*LESPKG Trigger: ACCCTTGGGTGACTCCAGCAACATTTCCTGGAAGTG...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS GCA 90 bp | TCTGGACACTGCTGGGCACTGGAGTCACATGAGGGTTACTATAACTaGTGTATACTGTTGCTGCAGACATCTGAGGACTATTACAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGHCWALESHEGYYN*CILLLQTSEDYYNH Trigger: GTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCAGTTATAGTAACCCTCATGTGACTCCAGTGCCCAGCAGTGTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | GCATTGTCACTGTTTCTAAGCTCTTGGGCCTGCCATGCAGTCTTCACTAGAGTTAACCACTGGTCATTTTaGCTGGGGTTAGTCGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSLFLSSWACHAVFTRVNHWSF*LGLVER Trigger: CCTTTCGACTAACCCCAGCAAAAATGACCAGTGGTT...AACTCTAGTGAAGACTGCATGGCAGGCCCAAGAGCTTAGAAACAGTGACAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS TCA 90 bp | CACTGGAGGCACCCGAGAAGATTTGTCACAGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTACCAATATGGTGGACGATATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HWRHPRRFVTGGIWC*RTLRCYQYGGRYFC Trigger: ACAGAAATATCGTCCACCATATTGGTAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | CAATGGTCATTGCTGCTAGGTTCATTTGCAAGATCTGGACACTGCTaGGCACTGGAGTCACATGAGGGTTACTATAACTGCTGTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: QWSLLLGSFARSGHC*ALESHEGYYNCCIL Trigger: CAGTATACAGCAGTTATAGTAACCCTCATGTGACTCCAGTGCCCAGCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGTAACCAGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAACCTGGCTTGTGCTGGTaGCTGAAAGTAATGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSNQAALLSVCREISIGQPGLCW*LKVMES Trigger: AGATTCCATTACTTTCAGCAACCAGCACAAGCCAGG...TTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCTGGTTACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTCACCCTTCATTTTGTTTCAGCTAGGTCCTTGGCACACATGAGGGGCGTAAGAGAGAAGAACAATTaGCTTGCAGTAATTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: MFTLHFVSARSLAHMRGVREKNN*LAVIHH Trigger: ATGGTGAATTACTGCAAGCAAATTGTTCTTCTCTCT...TACGCCCCTCATGTGTGCCAAGGACCTAGCTGAAACAAAATGAAGGGTGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097462.9 ENSMUST00000180215.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTTCTCTGAGCCTTGTGAAAGCTTGCACCAGAGGCCTTCAAAAACGGTGTaGTCATGGTATCAGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYFSEPCESLHQRPSKTV*SWYQVI Trigger: AATCACCTGATACCATGACAACACCGTTTTTGAAGG...CCTCTGGTGCAAGCTTTCACAAGGCTCAGAGAAATAGCATAAATTGTGACTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATCAGGATGGCATCGGGTaGACTCTCCTTGCTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YLEAPINKTILKEGIQIHQDGIG*TLLAVV Trigger: GACAACAGCAAGGAGAGTCAACCCGATGCCATCCTG...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | TGTCGTAGTTACAAATCTCAGAAGAACTCTGCATTAAAGCAAGCATaGCCAAAAACATTGACTCTGATGAAAGCTTGTTGCCCGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRSYKSQKNSALKQA*PKTLTLMKACCPFC Trigger: ACAGAACGGGCAACAAGCTTTCATCAGAGTCAATGTTTTTGGCCATGCTTGCTTTAATGCAGAGTTCTTCTGAGATTTGTAACTACGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAAACTGTGAGATGCCAGATTACTAACTGTAAACACTGGGGCATTTCATCTAGAGAGAAGAACAATTaGCTTGCAGTAATTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: WQTVRCQITNCKHWGISSREKNN*LAVIHH Trigger: ATGGTGAATTACTGCAAGCAAATTGTTCTTCTCTCT...AGATGAAATGCCCCAGTGTTTACAGTTAGTAATCTGGCATCTCACAGTTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATAATGGCTGGATACTGTaGCTGCAGATACATGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLEAPINKTILKEGIQIHNGWIL*LQIHED Trigger: GTCCTCATGTATCTGCAGCAACAGTATCCAGCCATT...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 90 bp | TTTCTCCATCTCTTTTCTAAGTATATCAACACGAGCTGCAAGTTCTaGAATGTCTTCACATACTTCTATCAGTTTGCTCAATCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FLHLFSKYINTSCKF*NVFTYFYQFAQSSI Trigger: GATGCTGGATTGAGCAAACTGATAGAAGTATGTGAAGACATTCCAGAACTTGCAGCTCGTGTTGATATACTTAGAAAAGAGATGGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097462.9 ENSMUST00000150649.9 ENSMUST00000180215.2 |
||
| CDS-3UTR CAA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATGTCTCTTCATTTTGGTaGCAAGTGGCTGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLEAPINKTILKEGIQIHVSSFW*QVAVLP Trigger: AGGAAGAACAGCCACTTGCAACCAAAATGAAGAGAC...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | TACTTGGAGGCACCTATTAATAAAACAATACTGAAAGAAGGCATACAGATCCATGAGAGTCTCTTCATTTaGGTTGCAAGTGGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLEAPINKTILKEGIQIHESLFI*VASGCS Trigger: AGAACAGCCACTTGCAACCAAAATGAAGAGACTCTC...ATGGATCTGTATGCCTTCTTTCAGTATTGTTTTATTAATAGGTGCCTCCAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGATTGGATGATAAGCTGCTTCAAGATTTTTATCATTGTGAAGAAGTCAGAGAGAAGAACAATTaGCTTGCAGTAATTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGRLDDKLLQDFYHCEEVREKNN*LAVIHH Trigger: ATGGTGAATTACTGCAAGCAAATTGTTCTTCTCTCT...GACTTCTTCACAATGATAAAAATCTTGAAGCAGCTTATCATCCAATCTCCCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097462.9 |
||
| CDS GCA 72 bp | GTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGGATaGTGCTGGAGGCTGTCACTGGAGGCACCCGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLRLPDMSGWSG*CWRLSLEAPEK Trigger: CTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS GCA 72 bp | AGACACCTGAGGACTATTACAGCCGTGGGCCATGGCTaGTGGGTAGAGTTGCAAGGTCTGGGCACTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHLRTITAVGHG*WVELQGLGTSR Trigger: CCTGGAAGTGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCACGGCTGTAATAGTCCTCAGGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 72 bp | CTGCAGACACCTGAGGACTATTACAGCCGTGGGCCATaGCTGCTGGGTAGAGTTGCAAGGTCTGGGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQTPEDYYSRGP*LLGRVARSGHF Trigger: GAAGTGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCACGGCTGTAATAGTCCTCAGGTGTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS CCA 72 bp | CACCTGAGGACTATTACAGCCGTGGGCCATGGCTGCTaGGTAGAGTTGCAAGGTCTGGGCACTTCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HLRTITAVGHGC*VELQGLGTSRK Trigger: TTTCCTGGAAGTGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCACGGCTGTAATAGTCCTCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
||
| CDS GCA 72 bp | TTGAGGTTGCCAGACATGTCTGGATGGTCTGGATGCTaGTGGAGGCTGTCACTGGAGGCACCCGAGAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: LRLPDMSGWSGC*WRLSLEAPEKI Trigger: AATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | AGGTTGCCAGACATGTCTGGATGGTCTGGATGCTGCTaGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: RLPDMSGWSGCC*RLSLEAPEKIC Trigger: ACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | ACTATTACAGCCGTGGGCCATGGCTGCTGGGTAGAGTaGCAAGGTCTGGGCACTTCCAGGAAATGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TITAVGHGCWVE*QGLGTSRKCCW Trigger: CCAGCAACATTTCCTGGAAGTGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCACGGCTGTAATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | TGTCTGGATGGTCTGGATGCTGCTGGAGGCTGTCACTaGAGGCACCCGAGAAGATTTGTCACAGGTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: CLDGLDAAGGCH*RHPRRFVTGGI Trigger: TATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | TACAAGGAAGTGTTGAGGTTGCCAGACATGTCTGGATaGTCTGGATGCTGCTGGAGGCTGTCACTGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: YKEVLRLPDMSG*SGCCWRLSLEA Trigger: TGCCTCCAGTGACAGCCTCCAGCAGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTTGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 90 bp | GCTTCACGAGTCAGCTTCTTTAGTTGTCCCCAGGATGGCATCGGGTaGACTCTCCTTGCTGTTGTCTGTGGTGGAGATAGGGAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ASRVSFFSCPQDGIG*TLLAVVCGGDRESL Trigger: GAGACTCTCCCTATCTCCACCACAGACAACAGCAAGGAGAGTCAACCCGATGCCATCCTGGGGACAACTAAAGAAGCTGACTCGTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS GCA 72 bp | ACCCAGATGAGATCCTATCCTTGCCTTGAGTGGTGTTaGTGGAGACAGAGACATGGCAGGAAAACTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TQMRSYPCLEWC*WRQRHGRKTPG Trigger: CCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAACACCACTCAAGGCAAGGATAGGATCTCATCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | CAGATGAGATCCTATCCTTGCCTTGAGTGGTGTTGCTaGAGACAGAGACATGGCAGGAAAACTCCTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QMRSYPCLEWCC*RQRHGRKTPGH Trigger: GTGCCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAACACCACTCAAGGCAAGGATAGGATCTCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | GTCAGCTTCTTTAGTTGTCCCCAGGATGGCATCGGGTaGACTCTCCTTGCTGTTGTCTGTGGTGGAGATAGG | + |
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Preference number: 6 (lower is better) Translates to: VSFFSCPQDGIG*TLLAVVCGGDR Trigger: CCTATCTCCACCACAGACAACAGCAAGGAGAGTCAACCCGATGCCATCCTGGGGACAACTAAAGAAGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS GCA 72 bp | GTAGAGTTGCAAGGTCTGGGCACTTCCAGGAAATGTTaGTGGAGTCACCCAAGGGTTATTGTAATGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VELQGLGTSRKC*WSHPRVIVMAG Trigger: TCCAGCCATTACAATAACCCTTGGGTGACTCCAGCAACATTTCCTGGAAGTGCCCAGACCTTGCAACTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | CTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTaGAATATGGTGCTGAAGAACCCTGAGATGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: LSLEAPEKICHR*NMVLKNPEMLP Trigger: TGGTAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | GAGTTGCAAGGTCTGGGCACTTCCAGGAAATGTTGCTaGAGTCACCCAAGGGTTATTGTAATGGCTGGATAC | + |
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Preference number: 6 (lower is better) Translates to: ELQGLGTSRKCC*SHPRVIVMAGY Trigger: GTATCCAGCCATTACAATAACCCTTGGGTGACTCCAGCAACATTTCCTGGAAGTGCCCAGACCTTGCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS TCA 72 bp | AGACTTCAGAGTAGCTTGGTGACTACAAGGAAGTGTTaGGGTTGCCAGACATGTCTGGATGGTCTGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: RLQSSLVTTRKC*GCQTCLDGLDA Trigger: AGCATCCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTTGTAGTCACCAAGCTACTCTGAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS GCA 72 bp | GCATGGCCAAAAACATTGACTCTGATGAAAGCTTGTTaGCCGTTCTGTGTACTAGTCCCTCTGCTTCACGAG | + |
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Preference number: 6 (lower is better) Translates to: AWPKTLTLMKAC*PFCVLVPLLHE Trigger: CTCGTGAAGCAGAGGGACTAGTACACAGAACGGGCAACAAGCTTTCATCAGAGTCAATGTTTTTGGCCATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CCA 72 bp | CTGTTGCTGCAGACATCTGAGGACTATTACAACCACTaGTCATTTTTGCTGGGGTTAGTCGAAAGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLLQTSEDYYNH*SFLLGLVERSG Trigger: CCCAGACCTTTCGACTAACCCCAGCAAAAATGACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS TCA 72 bp | CACCCGAGAAGATTTGTCACAGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTACCAATATGGTGGACGA | + |
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Preference number: 6 (lower is better) Translates to: HPRRFVTGGIWC*RTLRCYQYGGR Trigger: TCGTCCACCATATTGGTAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS GCA 72 bp | TCATTGCTGCTAGGTTCATTTGCAAGATCTGGACACTaGTGGGCACTGGAGTCACATGAGGGTTACTATAAC | + |
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Preference number: 6 (lower is better) Translates to: SLLLGSFARSGH*WALESHEGYYN Trigger: GTTATAGTAACCCTCATGTGACTCCAGTGCCCAGCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS GCA 72 bp | CTATTACAACCAATGGTCATTGCTGCTAGGTTCATTTaGAAGATCTGGACACTGCTGGGCACTGGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LLQPMVIAARFI*KIWTLLGTGVT Trigger: TGTGACTCCAGTGCCCAGCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTGGTTGTAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 90 bp | ATACTGTTGCTGCAGATACATGAGGACTATTACAACCAATGGTCATaGCTGCTAGGTTCATTTGCAAGATCTGGACACTGCTGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: ILLLQIHEDYYNQWS*LLGSFARSGHCWAL Trigger: CAGTGCCCAGCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTGGTTGTAATAGTCCTCATGTATCTGCAGCAACAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | AAGACACCTGAGGGGTATTATTGTAACTGCTGGATATaGTTGCTGCAGACACCTGAGGACTATTACAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: KTPEGYYCNCWI*LLQTPEDYYSR Trigger: ACGGCTGTAATAGTCCTCAGGTGTCTGCAGCAACAATATCCAGCAGTTACAATAATACCCCTCAGGTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | GAGTCACATGAGGGTTACTATAACTGCTGTATACTGTaGCTGCAGACATCTGAGGACTATTACAACCACTGG | + |
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Preference number: 6 (lower is better) Translates to: ESHEGYYNCCIL*LQTSEDYYNHW Trigger: CCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCAGTTATAGTAACCCTCATGTGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | CTGCAGATACATGAGGACTATTACAACCAATGGTCATaGCTGCTAGGTTCATTTGCAAGATCTGGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: LQIHEDYYNQWS*LLGSFARSGHC Trigger: GCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTGGTTGTAATAGTCCTCATGTATCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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| CDS CAA 72 bp | GAGTCACCCAAGGGTTATTGTAATGGCTGGATACTGTaGCTGCAGATACATGAGGACTATTACAACCAATGG | + |
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Preference number: 6 (lower is better) Translates to: ESPKGYCNGWIL*LQIHEDYYNQW Trigger: CCATTGGTTGTAATAGTCCTCATGTATCTGCAGCAACAGTATCCAGCCATTACAATAACCCTTGGGTGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150649.9 |
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