Pregenerated sensors for IFI209 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043263Ensembl transcript IDs: ENSMUST00000056071.13, ENSMUST00000193727.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACACCTTTACTCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATaGAACATCTTCTCTTCTGTCACGTCATATGAAAATGGTTCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: NTFTLKNSVSVATVA*NIFSSVTSYENGSV Trigger: AACAGAACCATTTTCATATGACGTGACAGAAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGAGTAAAGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR TCA 90 bp | ATTACTGTGGTGTTGACATTATGGACTTCAAGAGAAGTAGGAGGTTaGCTGACCAACTTGGGTACCATAGGATTTTGTTTATTGCATAGG | + |
|
Preference number: 1 (lower is better) Translates to: ITVVLTLWTSREVGG*LTNLGTIGFCLLHR Trigger: CCTATGCAATAAACAAAATCCTATGGTACCCAAGTTGGTCAGTCAACCTCCTACTTCTCTTGAAGTCCATAATGTCAACACCACAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR GCA 90 bp | AGCTTTGATAACCTGCATGTTACTGTGTGTTGTAGATCTCAGCTGTaGTTTTTCTTCATCTGGGATCAGTTTAAAGCATATGAGTCTAAG | + |
|
Preference number: 1 (lower is better) Translates to: SFDNLHVTVCCRSQL*FFFIWDQFKAYESK Trigger: CTTAGACTCATATGCTTTAAACTGATCCCAGATGAAGAAAAAGCACAGCTGAGATCTACAACACACAGTAACATGCAGGTTATCAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATGTCAAACACCTTGTAGCCACGGTGGCATaGAACATCTTCTCTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GKDLIWYELLLQDNVKHLVATVA*NIFSSV Trigger: GACAGAAGAGAAGATGTTCCATGCCACCGTGGCTAC...AAGGTGTTTGACATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR CAA 90 bp | CCCCAAGCCAAGTGGAGTTCCAGGTTGCTAAACTATACCCTATGCTaGATTGACTTCTTCTCACGTGGGAGTAATATAATAAAATCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PQAKWSSRLLNYTLC*IDFFSRGSNIIKSK Trigger: CTTGGATTTTATTATATTACTCCCACGTGAGAAGAAGTCAATCAAGCATAGGGTATAGTTTAGCAACCTGGAACTCCACTTGGCTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAAGCAGGACTGAGTGGTTGTTTCTCAATTCTTAGCTTTGATAACCTGCATGTCTCTTCAAGTTCTTaGCTGAGTTTCTGTTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KEAGLSGCFSILSFDNLHVSSSS*LSFCLG Trigger: GCCCAAACAGAAACTCAGGCAAGAACTTGAAGAGAC...ATGCAGGTTATCAAAGCTAAGAATTGAGAAACAACCACTCAGTCCTGCTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR CAA 90 bp | ACATCCCTATTAATCCCATTTCCTAATGTCTGTCTACTGAGGTCTTaGCCTACACAAATCTCCCAAGGGGTCAGAAACACATATCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TSLLIPFPNVCLLRS*PTQISQGVRNTYLV Trigger: TACAAGATATGTGTTTCTGACCCCTTGGGAGATTTGTGTAGGCAAAGACCTCAGTAGACAGACATTAGGAAATGGGATTAATAGGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR GCA 90 bp | TATTCAGAGGTGAGATTCTTTACTGTTGCAAGCAGTAAAATGTACTCTGATCATCAACTGCATTCAGCCTaGATTTCAGCCTCCACATCC | + |
|
Preference number: 2 (lower is better) Translates to: YSEVRFFTVASSKMYSDHQLHSA*ISASTS Trigger: GGATGTGGAGGCTGAAATGCAGGCTGAATGCAGTTG...ATGATCAGAGTACATTTTACTGCTTGCAACAGTAAAGAATCTCACCTCTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 90 bp | ACACAAATCTCCCAAGGGGTCAGAAACACATATCTTGTACTTATCTaGTTATGGCTGCTATTTCTACCTTTCCTTTGCTCCTTTTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TQISQGVRNTYLVLI*LWLLFLPFLCSFSP Trigger: TGGAGAAAAGGAGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATGTGTTTCTGACCCCTTGGGAGATTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGTTTGTTTGCCTAGTGTTTGAAAGTAAGTCTCTGAAGCTTCCAGTGCATAAAGCAACTGACAAATaGAAGAAACTTGTGAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RGFVCLVFESKSLKLPVHKATDK*KKLVKY Trigger: GTACTTCACAAGTTTCTTGCATTTGTCAGTTGCTTT...ATGCACTGGAAGCTTCAGAGACTTACTTTCAAACACTAGGCAAACAAACCCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTCTGAAGACATTAGTCATGTTTATTCCTCCTTaGTCTGCAAACCCAGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IDSWKCIGRTASLLKTLVMFIPP*SANPVL Trigger: TAAAACTGGGTTTGCAGACCAAGGAGGAATAAACAT...GACTAATGTCTTCAGAAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 90 bp | GACTCATTTGTTTTAGGACAGCTTCCTCATGGTCTCAAGATTTCCTaGACATTATTTCACCCTATATTCAGAGGTGAGATTCTTTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: DSFVLGQLPHGLKIS*TLFHPIFRGEILYC Trigger: ACAGTAAAGAATCTCACCTCTGAATATAGGGTGAAATAATGTCAAGGAAATCTTGAGACCATGAGGAAGCTGTCCTAAAACAAATGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 90 bp | ACCTTTCCTTTGCTCCTTTTCTCCATGATTGGTCATCATTGCCCATaGTCGTTATTGATACTGATTATAAAGGTAACAGGATATAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: TFPLLLFSMIGHHCP*SLLILIIKVTGYRS Trigger: GGATCTATATCCTGTTACCTTTATAATCAGTATCAATAACGACAATGGGCAATGATGACCAATCATGGAGAAAAGGAGCAAAGGAAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 90 bp | ATATCTTGTACTTATCTTGTTATGGCTGCTATTTCTACCTTTCCTTaGCTCCTTTTCTCCATGATTGGTCATCATTGCCCATTGTCGTTA | + |
|
Preference number: 2 (lower is better) Translates to: ISCTYLVMAAISTFP*LLFSMIGHHCPLSL Trigger: TAACGACAATGGGCAATGATGACCAATCATGGAGAAAAGGAGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR TCA 90 bp | AACTTCTCCTTCAGGACAATGTCAAACACCTTTACTCTAAAGAATTCTGTTTCCTTGGGCTTCCCTCAATaGAGGAAGATTAAACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NFSFRTMSNTFTLKNSVSLGFPQ*RKIKLK Trigger: TTTCAGTTTAATCTTCCTTCATTGAGGGAAGCCCAA...GGAAACAGAATTCTTTAGAGTAAAGGTGTTTGACATTGTCCTGAAGGAGAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTCAGAGGTGAGATTCTTTACTGTTGCAAGCAGTAAAATGTACTCTGATCATCTTTATAAACATCAGTaGTGTCCAAGTCCGCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: YSEVRFFTVASSKMYSDHLYKHQ*CPSPQN Trigger: GTTTTGCGGACTTGGACATCACTGATGTTTATAAAG...ATGATCAGAGTACATTTTACTGCTTGCAACAGTAAAGAATCTCACCTCTGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR GCA 90 bp | TATTCAGAGGTGAGATTCTTTACTGTTGCAAGCAGTAAAATGTACTCTGATCATTATTCCTCCTTGGTCTaGAAACCCAGTTTTAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YSEVRFFTVASSKMYSDHYSSLV*KPSFKA Trigger: TGCTTTAAAACTGGGTTTGCAGACCAAGGAGGAATA...ATGATCAGAGTACATTTTACTGCTTGCAACAGTAAAGAATCTCACCTCTGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAACACATATCTTGTACTTATCTTGTTATGGCTGCTATTTCTACCTTTCCACTCACATTGACTCATaGAAATGCATAGGAAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SETHILYLSCYGCYFYLSTHIDS*KCIGRT Trigger: AGTCCTTCCTATGCATTTCCATGAGTCAATGTGAGT...GGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATGTGTTTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTCAATTCTTAGCTTTGATAACCTGCATGTTACTGTGTGTTGTAGATCTCCTCAGAAGGTTCTTTaGGTACATTTTTCAGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CFSILSFDNLHVTVCCRSPQKVL*VHFSVS Trigger: AGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGG...AGATCTACAACACACAGTAACATGCAGGTTATCAAAGCTAAGAATTGAGAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGCAATATTGGTCAGTCGTCCGTAGACCTCCACTTCCATCATCCCTGTATTGTCTCTTCAAGTTCTaGCCTGAGTTTCTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YKQYWSVVRRPPLPSSLYCLFKF*PEFLFG Trigger: CCCAAACAGAAACTCAGGCAAGAACTTGAAGAGACA...ATACAGGGATGATGGAAGTGGAGGTCTACGGACGACTGACCAATATTGCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR TCA 72 bp | CAAGAGCATACAATTGCTCTCTGCTTTCTGCTCTGCTaGTACAATGTGATCAGCCACAGCACTCTCATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QEHTIALCFLLC*YNVISHSTLIY Trigger: GTAGATGAGAGTGCTGTGGCTGATCACATTGTATCAGCAGAGCAGAAAGCAGAGAGCAATTGTATGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR TCA 72 bp | CAATTGCTCTCTGCTTTCTGCTCTGCTGATACAATGTaGTCAGCCACAGCACTCTCATCTACCATTAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLSAFCSADTM*SATALSSTIKL Trigger: CAGTTTAATGGTAGATGAGAGTGCTGTGGCTGATCACATTGTATCAGCAGAGCAGAAAGCAGAGAGCAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR TCA 72 bp | ATTCAGCCTGCATTTCAGCCTCCACATCCTTTTTATTaGTGGCTTGATGTTTCTGAGGATGACACAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IQPAFQPPHPFY*WLDVSEDDTAV Trigger: AACAGCTGTGTCATCCTCAGAAACATCAAGCCATCAATAAAAAGGATGTGGAGGCTGAAATGCAGGCTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGTTTGTTTGCCTAGTGTTTGAAAGTAAGTCTCTGAAGCTTCCAGTGCATCATGTTTATTCCTCCTaGGTCTGCAAACCCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGFVCLVFESKSLKLPVHHVYSS*VCKPSF Trigger: AAAACTGGGTTTGCAGACCAAGGAGGAATAAACATG...ATGCACTGGAAGCTTCAGAGACTTACTTTCAAACACTAGGCAAACAAACCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CCA 72 bp | ACTCTAAAGAATTCTGTTTCCGTAGCCACGGTGGCATaGAACATCTTCTCTTCTGTCACGTCATATGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLKNSVSVATVA*NIFSSVTSYEN Trigger: ATTTTCATATGACGTGACAGAAGAGAAGATGTTCCATGCCACCGTGGCTACGGAAACAGAATTCTTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATGTCAAACACCTTTACTCCTCAGAAGGTTCTTaGGGTACATTTTTCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDLIWYELLLQDNVKHLYSSEGS*GTFFSL Trigger: GAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGA...GTAAAGGTGTTTGACATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGGACTGAGTGGTTGTTTCTCAATTCTTAGCTTTGATAACCTGCATGTTATTTTAGGTGTTCGATaGGCACTTTTCCTCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EAGLSGCFSILSFDNLHVILGVR*ALFLSE Trigger: TTCACTGAGGAAAAGTGCCAATCGAACACCTAAAAT...AACATGCAGGTTATCAAAGCTAAGAATTGAGAAACAACCACTCAGTCCTGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTCTCCTTCAGGACAATGTCAAACACCTTTACTCTAAAGAATTCTGTTTCCTCTTTCCTTTCCAAGTaGCTTTTGTTCAGAATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NFSFRTMSNTFTLKNSVSSFLSK*LLFRML Trigger: AAGCATTCTGAACAAAAGCAACTTGGAAAGGAAAGA...GGAAACAGAATTCTTTAGAGTAAAGGTGTTTGACATTGTCCTGAAGGAGAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR TCA 72 bp | GTATATATTTATGAACCCATTGCAGCCAACATAGTTTaGGATGGTAAGGACCTTATTTGGTATGAACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VYIYEPIAANIV*DGKDLIWYELL Trigger: GAGAAGTTCATACCAAATAAGGTCCTTACCATCTCAAACTATGTTGGCTGCAATGGGTTCATAAATATATAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| 3UTR TCA 72 bp | GATTTCCTTGACATTATTTCACCCTATATTCAGAGGTaGGATTCTTTACTGTTGCAAGCAGTAAAATGTACT | + |
|
Preference number: 3 (lower is better) Translates to: DFLDIISPYIQR*DSLLLQAVKCT Trigger: AGTACATTTTACTGCTTGCAACAGTAAAGAATCTCACCTCTGAATATAGGGTGAAATAATGTCAAGGAAATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGACCATTTTCCTCAGAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCGCTGGATGCTGTTCCTaGAGACACTGGAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGDHFPQKVLWVHFSVSVAGCCS*RHWRVQ Trigger: CTGGACCCTCCAGTGTCTTCAGGAACAGCATCCAGC...GACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTCACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR TCA 90 bp | CTGCATTTCAGCCTCCACATCCTTTTTATTGATGGCTTGATGTTTCTGAGGATGGCTGGATGCTGTTCCTaGAGACACTGGAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFSLHILFIDGLMFLRMAGCCS*RHWRVQ Trigger: CTGGACCCTCCAGTGTCTTCAGGAACAGCATCCAGC...CATCCTCAGAAACATCAAGCCATCAATAAAAAGGATGTGGAGGCTGAAATGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGACCATTTTCCTCAGAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCCTAGTGCCTGGGCACTaGTGGATGCTGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGDHFPQKVLWVHFSVSVLVPGH*WMLFLK Trigger: CTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAG...GACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTCACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR GCA 90 bp | TACAAGCAATATTGGTCAGTCGTCCGTAGACCTCCACTTCCATCATCCCTGTATTTGCCTTTGTCTTTTTaGTGCGGTTTTCCGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YKQYWSVVRRPPLPSSLYLPLSF*CGFPFP Trigger: GGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAA...ATACAGGGATGATGGAAGTGGAGGTCTACGGACGACTGACCAATATTGCTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTCCTCCTTGGTCTGCAAACCCAGTTTTAAAGCAACTGACAAATGCAAGACTAGTGCCTGGGCACTaGTGGATGCTGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIPPWSANPVLKQLTNARLVPGH*WMLFLK Trigger: CTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAG...TCTTGCATTTGTCAGTTGCTTTAAAACTGGGTTTGCAGACCAAGGAGGAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | TTGTCTCATTTATGCACTCAAACAAGTCTAGGCTGGATTAGGCTATCTCTTGTAAGGTGTACTCCTCCCTaGTTCTGGTTCTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLCTQTSLGWIRLSLVRCTPP*FWFCIF Trigger: GAAGATGCAGAACCAGAATCAGGGAGGAGTACACCT...TACAAGAGATAGCCTAATCCAGCCTAGACTTGTTTGAGTGCATAAATGAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | AAGGACCTTATTTGGTATGAACTTCTCCTTCAGGACAATGTCAAACACCTTTACAGGTGTACTCCTCCCTaGTTCTGGTTCTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDLIWYELLLQDNVKHLYRCTPP*FWFCIF Trigger: GAAGATGCAGAACCAGAATCAGGGAGGAGTACACCT...GTAAAGGTGTTTGACATTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR TCA 90 bp | TACAAGCAATATTGGTCAGTCGTCCGTAGACCTCCACTTCCATCATCCCTGTATTTTTGGGGGACTGAATaGTGCTTTGTAATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKQYWSVVRRPPLPSSLYFWGTE*CFVMFL Trigger: CAGAAACATTACAAAGCATCATTCAGTCCCCCAAAA...ATACAGGGATGATGGAAGTGGAGGTCTACGGACGACTGACCAATATTGCTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR GCA 90 bp | ATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTCTGAAGACATTAGTCATGTTTCTGAAGATCTaGTGCTGGTCTGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IDSWKCIGRTASLLKTLVMFLKI*CWSDHC Trigger: GCAGTGGTCAGACCAGCAGCAGATCTTCAGAAACAT...GACTAATGTCTTCAGAAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | ATTGCTAAAAGAATAATCTACGTCCATGTTGGAAACATATACCTGAAGCCTGATGTGCCTGGGCACTGCTaGATGCTGTTCCTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IAKRIIYVHVGNIYLKPDVPGHC*MLFLKT Trigger: TGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCAC...ATCAGGCTTCAGGTATATGTTTCCAACATGGACGTAGATTATTCTTTTAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAAGTCCGCAAAACAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTGTAGCCACGGTGGCATaGAACATCTTCTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSKSAKQELMQFHKGSRTVATVA*NIFSSV Trigger: GACAGAAGAGAAGATGTTCCATGCCACCGTGGCTAC...AGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTGTTTTGCGGACTTGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | TATTCAGAGGTGAGATTCTTTACTGTTGCAAGCAGTAAAATGTACTCTGATCATGATCTGCTGCTGGTCTaGCCACTGCTGGATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: YSEVRFFTVASSKMYSDHDLLLV*PLLDAI Trigger: AATAGCATCCAGCAGTGGTCAGACCAGCAGCAGATC...ATGATCAGAGTACATTTTACTGCTTGCAACAGTAAAGAATCTCACCTCTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | CTACAATGTACTCACATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTGGCACTTTTCCTCAGTaGAAGTGGGATATTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQCTHIDSWKCIGRTASLGTFPQ*KWDIHW Trigger: CCAATGAATATCCCACTTTCACTGAGGAAAAGTGCC...AAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAATGTGAGTACATTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 72 bp | TCCCAAGGGGTCAGAAACACATATCTTGTACTTATCTaGTTATGGCTGCTATTTCTACCTTTCCTTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGVRNTYLVLI*LWLLFLPFLCS Trigger: GGAGCAAAGGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATGTGTTTCTGACCCCTTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 72 bp | GGTGTTGACATTATGGACTTCAAGAGAAGTAGGAGGTaGACTGACCAACTTGGGTACCATAGGATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDIMDFKRSRR*TDQLGYHRILF Trigger: AAACAAAATCCTATGGTACCCAAGTTGGTCAGTCAACCTCCTACTTCTCTTGAAGTCCATAATGTCAACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | AGAGGGTTTGTTTGCCTAGTGTTTGAAAGTAAGTCTCTGAAGCTTCCAGTGCATTTTTGGGGGACTGAATaGTGCTTTGTAATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGFVCLVFESKSLKLPVHFWGTE*CFVMFL Trigger: CAGAAACATTACAAAGCATCATTCAGTCCCCCAAAA...ATGCACTGGAAGCTTCAGAGACTTACTTTCAAACACTAGGCAAACAAACCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | ATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTCTGAAGACATTAGTCGGACCTTATTTGGTATaGACTTCTCCTTCAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: IDSWKCIGRTASLLKTLVGPYLV*TSPSGQ Trigger: TTGTCCTGAAGGAGAAGTTCATACCAAATAAGGTCC...GACTAATGTCTTCAGAAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | CAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTGAGTGGTTGTTTCTCAATATGTTTCTGAAGATCTaGTGCTGGTCTGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QELMQFHKGSRTEWLFLNMFLKI*CWSDHC Trigger: GCAGTGGTCAGACCAGCAGCAGATCTTCAGAAACAT...ATTGAGAAACAACCACTCAGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR CCA 90 bp | CTGCATTTCAGCCTCCACATCCTTTTTATTGATGGCTTGATGTTTCTGAGGATGGCTGGATGCTATTGTTaGAGAAATTTGAATGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHFSLHILFIDGLMFLRMAGCYC*RNLNGL Trigger: CAAGCCATTCAAATTTCTCCAACAATAGCATCCAGC...CATCCTCAGAAACATCAAGCCATCAATAAAAAGGATGTGGAGGCTGAAATGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | CTACAATGTACTCACATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTTCAGTCTCTGTCTCTTaGCTATTGTTGCTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQCTHIDSWKCIGRTASLSVSVS*LLLLEE Trigger: TTCCTCTAGCAACAATAGCCAAGAGACAGAGACTGA...AAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAATGTGAGTACATTGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTTTGTTTGCCTAGTGTTTGAAAGTAAGTCTCTGAAGCTTCCAGTGCATCCTCAGAAGGTTCTTTaGGTACATTTTTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGFVCLVFESKSLKLPVHPQKVL*VHFSVS Trigger: AGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGG...ATGCACTGGAAGCTTCAGAGACTTACTTTCAAACACTAGGCAAACAAACCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR TCA 90 bp | ATGTCCAAGTCCGCAAAACAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTATTGTTGGAGAAATTTaGATGGCTTGGTTCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MSKSAKQELMQFHKGSRTIVGEI*MAWFLR Trigger: CCGAAGGAACCAAGCCATTCAAATTTCTCCAACAAT...AGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTGTTTTGCGGACTTGGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTCCTCCTTGGTCTGCAAACCCAGTTTTAAAGCAACTGACAAATGCAAGACTGACCACTGCTGGATaGTATTGTTGGAGAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIPPWSANPVLKQLTNARLTTAG*YCWRNL Trigger: CAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAG...TCTTGCATTTGTCAGTTGCTTTAAAACTGGGTTTGCAGACCAAGGAGGAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | ACCATTTTCCTCAGAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTTCAATTGGAGAAATTTGAATaGCTTGGTTCCTTCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIFLRRFFGYIFQSLSLQLEKFE*LGSFGK Trigger: CTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAA...TTGAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTGAGTGGTTGTTTCTCAATATTGTTGGAGAAATTTaGATGGCTTGGTTCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QELMQFHKGSRTEWLFLNIVGEI*MAWFLR Trigger: CCGAAGGAACCAAGCCATTCAAATTTCTCCAACAAT...ATTGAGAAACAACCACTCAGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR TCA 90 bp | CTACAATGTACTCACATTGACTCATGGAAATGCATAGGAAGGACTGCATCACTTCACTGTATATATTTATaGACCCATTGCAGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LQCTHIDSWKCIGRTASLHCIYL*THCSQH Trigger: ATGTTGGCTGCAATGGGTTCATAAATATATACAGTG...AAGTGATGCAGTCCTTCCTATGCATTTCCATGAGTCAATGTGAGTACATTGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | ATTGCTAAAAGAATAATCTACGTCCATGTTGGAAACATATACCTGAAGCCTGATTTGCCTTTGTCTTTTTaGTGCGGTTTTCCGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IAKRIIYVHVGNIYLKPDLPLSF*CGFPFP Trigger: GGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAA...ATCAGGCTTCAGGTATATGTTTCCAACATGGACGTAGATTATTCTTTTAGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCATTTATGCACTCAAACAAGTCTAGGCTGGATTAGGCTATCTCTTGTATGTAGATCTCAGCTGTaGTTTTTCTTCATCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLCTQTSLGWIRLSLVCRSQL*FFFIWD Trigger: ATCCCAGATGAAGAAAAAGCACAGCTGAGATCTACA...TACAAGAGATAGCCTAATCCAGCCTAGACTTGTTTGAGTGCATAAATGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAAGTCCGCAAAACAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTGCTGGATGCTATTGTTaGAGAAATTTGAATGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSKSAKQELMQFHKGSRTAGCYC*RNLNGL Trigger: CAAGCCATTCAAATTTCTCCAACAATAGCATCCAGC...AGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTGTTTTGCGGACTTGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAAGTCCGCAAAACAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTGGTAAGGACCTTATTTaGTATGAACTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSKSAKQELMQFHKGSRTGKDLI*YELLLQ Trigger: CTGAAGGAGAAGTTCATACCAAATAAGGTCCTTACC...AGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTGTTTTGCGGACTTGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 72 bp | GTTTTAGGACAGCTTCCTCATGGTCTCAAGATTTCCTaGACATTATTTCACCCTATATTCAGAGGTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLGQLPHGLKIS*TLFHPIFRGEI Trigger: AATCTCACCTCTGAATATAGGGTGAAATAATGTCAAGGAAATCTTGAGACCATGAGGAAGCTGTCCTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| 3UTR CAA 72 bp | CTACACAAATCTCCCAAGGGGTCAGAAACACATATCTaGTACTTATCTTGTTATGGCTGCTATTTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHKSPKGSETHI*YLSCYGCYFYL Trigger: AAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATGTGTTTCTGACCCCTTGGGAGATTTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CCA 90 bp | TCAGAAACACATATCTTGTACTTATCTTGTTATGGCTGCTATTTCTACCTTTCCTTGGAGAAATTTGAATaGCTTGGTTCCTTCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SETHILYLSCYGCYFYLSLEKFE*LGSFGK Trigger: CTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAA...GGAAAGGTAGAAATAGCAGCCATAACAAGATAAGTACAAGATATGTGTTTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCATTTATGCACTCAAACAAGTCTAGGCTGGATTAGGCTATCTCTTGTATTAGCTTTGATAACCTaGATGTTACTGTGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLCTQTSLGWIRLSLVLALIT*MLLCVV Trigger: TACAACACACAGTAACATGCAGGTTATCAAAGCTAA...TACAAGAGATAGCCTAATCCAGCCTAGACTTGTTTGAGTGCATAAATGAGACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR GCA 90 bp | AACTTCTCCTTCAGGACAATGTCAAACACCTTTACTCTAAAGAATTCTGTTTCCCCAAGTCCTGGAATCTaGTTATATAGTTTTATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFSFRTMSNTFTLKNSVSPSPGI*LYSFIS Trigger: ACTGATAAAACTATATAAGCAGATTCCAGGACTTGG...GGAAACAGAATTCTTTAGAGTAAAGGTGTTTGACATTGTCCTGAAGGAGAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS-3UTR GCA 90 bp | ATTGCTAAAAGAATAATCTACGTCCATGTTGGAAACATATACCTGAAGCCTGATCCAAGTCCTGGAATCTaGTTATATAGTTTTATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IAKRIIYVHVGNIYLKPDPSPGI*LYSFIS Trigger: ACTGATAAAACTATATAAGCAGATTCCAGGACTTGG...ATCAGGCTTCAGGTATATGTTTCCAACATGGACGTAGATTATTCTTTTAGCAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CCA 90 bp | TCTTGGCTATTGTTGCTAGAGGAACTCCTAGTGCCTGGGCACTGCTaGATGCTGTTCCTGAAGACACTGGAGGGTCCAGAATACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLLLLEELLVPGHC*MLFLKTLEGPEYCW Trigger: CCAGCAGTATTCTGGACCCTCCAGTGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CCA 90 bp | ACTTGGCTATTGTTGCTAGAGGAACTCCTAGTGCCTGGGCACTGCTaGATGCTGTTCCTGAAGACACTGGAGGGTCCAGAATACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TWLLLLEELLVPGHC*MLFLKTLEGPEYCW Trigger: CCAGCAGTATTCTGGACCCTCCAGTGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS GCA 90 bp | TCTTCATTTGTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTTaGCTTTGTCTTTTTGCTGCGGTTTTCCGTTTCCCTGTCCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFVVDIGWEVLGSS*LCLFAAVFRFPVRV Trigger: GACACGGACAGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCAAGTCCGCAAAACAAGAATTAATGCAGTTTCATAAAGGAAGCAGGACTTCTGTCTCTTGGCTATaGTTGCTAGAGGAACTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: MSKSAKQELMQFHKGSRTSVSWL*LLEELL Trigger: TAGGAGTTCCTCTAGCAACAATAGCCAAGAGACAGA...AGTCCTGCTTCCTTTATGAAACTGCATTAATTCTTGTTTTGCGGACTTGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS-3UTR CAA 90 bp | ATTGCTAAAAGAATAATCTACGTCCATGTTGGAAACATATACCTGAAGCCTGATATTTTAGGTGTTCGATaGGCACTTTTCCTCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IAKRIIYVHVGNIYLKPDILGVR*ALFLSE Trigger: TTCACTGAGGAAAAGTGCCAATCGAACACCTAAAAT...ATCAGGCTTCAGGTATATGTTTCCAACATGGACGTAGATTATTCTTTTAGCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CCA 72 bp | TTGTTGCTAGAGGAACTCCTAGTGCCTGGGCACTGCTaGATGCTGTTCCTGAAGACACTGGAGGGTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLEELLVPGHC*MLFLKTLEGPE Trigger: TTCTGGACCCTCCAGTGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | CTCTTGGCTATTGTTGCTAGAGGAACTCCTAGTGCCTaGGCACTGCTGGATGCTGTTCCTGAAGACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLAIVARGTPSA*ALLDAVPEDTG Trigger: TCCAGTGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CCA 72 bp | CACTTGGCTATTGTTGCTAGAGGAACTCCTAGTGCCTaGGCACTGCTGGATGCTGTTCCTGAAGACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLAIVARGTPSA*ALLDAVPEDTG Trigger: TCCAGTGTCTTCAGGAACAGCATCCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | TCTGCTGCTGGTCTGACCACTGCTGGATGCTATTGTTaGAGAAATTTGAATGGCTTGGTTCCTTCGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAAGLTTAGCYC*RNLNGLVPSGS Trigger: GCTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CAA 72 bp | TGGGTACATTTTTCAGTCTCTGTCTCTTGGCTATTGTaGCTAGAGGAACTCCTAGTGCCTGGGCACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVHFSVSVSWLL*LEELLVPGHCW Trigger: CCAGCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGAGACAGAGACTGAAAAATGTACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS GCA 72 bp | GTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTTaGCTTTGTCTTTTTGCTGCGGTTTTCCGTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVDIGWEVLGSS*LCLFAAVFRFP Trigger: AGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CAA 72 bp | ATCTGCTGCTGGTCTGACCACTGCTGGATGCTATTGTaGGAGAAATTTGAATGGCTTGGTTCCTTCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ICCWSDHCWMLL*EKFEWLGSFGK Trigger: CTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CAA 72 bp | AAGATCTGCTGCTGGTCTGACCACTGCTGGATGCTATaGTTGGAGAAATTTGAATGGCTTGGTTCCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KICCWSDHCWML*LEKFEWLGSFG Trigger: CCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CAA 72 bp | CTTTGGGTACATTTTTCAGTCTCTGTCTCTTGGCTATaGTTGCTAGAGGAACTCCTAGTGCCTGGGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWVHFSVSVSWL*LLEELLVPGHC Trigger: GCAGTGCCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CAA 90 bp | ATTTGTGGTGGACATAGGTTGGGAAGTACTGGGTTCTTCTTGCCTTaGTCTTTTTGCTGCGGTTTTCCGTTTCCCTGTCCGTGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ICGGHRLGSTGFFLP*SFCCGFPFPCPCPF Trigger: AAAAGGACACGGACAGGGAAACGGAAAACCGCAGCAAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | AAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTTaGCTATTGTTGCTAGAGGAACTCCTAGTGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KVLWVHFSVSVS*LLLLEELLVPG Trigger: CCCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CAA 72 bp | GAGAAATTTGAATGGCTTGGTTCCTTCGGGAAGCAGTaGGTAAAGATAACTGAGCAACCTGTGTGTCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EKFEWLGSFGKQ*VKITEQPVCQV Trigger: CACCTGACACACAGGTTGCTCAGTTATCTTTACCAACTGCTTCCCGAAGGAACCAAGCCATTCAAATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CAA 72 bp | GAAGGTTCTTTGGGTACATTTTTCAGTCTCTGTCTCTaGGCTATTGTTGCTAGAGGAACTCCTAGTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EGSLGTFFSLCL*AIVARGTPSAW Trigger: CCAGGCACTAGGAGTTCCTCTAGCAACAATAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CCA 72 bp | GACCACTGCTGGATGCTATTGTTGGAGAAATTTGAATaGCTTGGTTCCTTCGGGAAGCAGTTGGTAAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: DHCWMLLLEKFE*LGSFGKQLVKI Trigger: TATCTTTACCAACTGCTTCCCGAAGGAACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | ATGTTTCTGAAGATCTGCTGCTGGTCTGACCACTGCTaGATGCTATTGTTGGAGAAATTTGAATGGCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MFLKICCWSDHC*MLLLEKFEWLG Trigger: ACCAAGCCATTCAAATTTCTCCAACAATAGCATCCAGCAGTGGTCAGACCAGCAGCAGATCTTCAGAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | TCTGGTTCTGCATCTTCATTTGTGGTGGACATAGGTTaGGAAGTACTGGGTTCTTCTTGCCTTTGTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGSASSFVVDIG*EVLGSSCLCLF Trigger: AAAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGATGCAGAACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS CCA 72 bp | AACCTTGCTGGTGACCATTTTCCTCAGAAGGTTCTTTaGGTACATTTTTCAGTCTCTGTCTCTTGGCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: NLAGDHFPQKVL*VHFSVSVSWLL Trigger: CAATAGCCAAGAGACAGAGACTGAAAAATGTACCCAAAGAACCTTCTGAGGAAAATGGTCACCAGCAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056071.13 |
||
| CDS CAA 72 bp | TTCTGGTTCTGCATCTTCATTTGTGGTGGACATAGGTaGGGAAGTACTGGGTTCTTCTTGCCTTTGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FWFCIFICGGHR*GSTGFFLPLSF Trigger: AAAAGACAAAGGCAAGAAGAACCCAGTACTTCCCAACCTATGTCCACCACAAATGAAGATGCAGAACCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||
| CDS GCA 72 bp | TTGAGTTTATTAGCAATGTCTCCAAGTCCTGGAATCTaGTTATATAGTTTTATCAGTTGGTCCACTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLLAMSPSPGI*LYSFISWSTPA Trigger: TGCTGGAGTGGACCAACTGATAAAACTATATAAGCAGATTCCAGGACTTGGAGACATTGCTAATAAACTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056071.13 ENSMUST00000193727.2 |
||