Pregenerated sensors for IFI208 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066677Ensembl transcript IDs: ENSMUST00000085876.12, ENSMUST00000169857.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAATTCCAAGCCCAGGGTCAGCTCCAGGACTGCCTAGGACATTGGTaGAGGCCAGGAAGCAAAATTCAACCTGATTTAGGTATTAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: KFQAQGQLQDCLGHW*RPGSKIQPDLGISK Trigger: TTTACTAATACCTAAATCAGGTTGAATTTTGCTTCCTGGCCTTCACCAATGTCCTAGGCAGTCCTGGAGCTGACCCTGGGCTTGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR CCA 90 bp | AAGAAAACATACAGATCCATTCACCAACTAACACAAGAACAAGTTTaGAGCATTCATGCTACAGGGATGCCAAGTCTCCAGGACATTAAG | + |
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Preference number: 1 (lower is better) Translates to: KKTYRSIHQLTQEQV*SIHATGMPSLQDIK Trigger: CTTAATGTCCTGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTTGTTCTTGTGTTAGTTGGTGAATGGATCTGTATGTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR TCA 90 bp | AGTCTGCCATACCTGACTGTAATGAGGATTCTAAGTTTACTATTTTaGACTAGTCCTGAGATTTCTAGCTCCTATCTGGCAAACTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLPYLTVMRILSLLF*TSPEISSSYLANCE Trigger: CTCACAGTTTGCCAGATAGGAGCTAGAAATCTCAGGACTAGTTCAAAATAGTAAACTTAGAATCCTCATTACAGTCAGGTATGGCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR-3UTR GCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGCCAAGCTCTTGGGCCTaGCATGCAGTCTTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: PSHNLCYSSEPCESLHQGPSSWA*HAVFTG Trigger: TCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGG...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGCTCTTGGGCCTGCCATaGAGTCTTCACTGGAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GSNLAALLSVCREISIGQLLGLP*SLHWSL Trigger: CAAACTCCAGTGAAGACTGCATGGCAGGCCCAAGAG...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR CAA 90 bp | TTAAGTTTCCATGAAACTTTTTGCCTCAGCACTGTGTCCAAGCTCTaGGGCCTGCCATGCAGTCTTCACTGGAGTTTGTGTAGCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSFHETFCLSTVSKL*GLPCSLHWSLCSIP Trigger: GGGAATGCTACACAAACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCAAAAAGTTTCATGGAAACTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGTTTCTAGCTCCTATCTaGCAAACTGTGAGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSHNLCYSSEPCESLHQGFLAPI*QTVRCQ Trigger: CTGGCATCTCACAGTTTGCCAGATAGGAGCTAGAAA...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR GCA 72 bp | CAAGTCTCCAGGACATTAAGTTTCCATGAAACTTTTTaGCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVSRTLSFHETF*LSTVSKLLGLP Trigger: TGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCAAAAAGTTTCATGGAAACTTAATGTCCTGGAGACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR CCA 72 bp | ATGAAACTTTTTGCCTCAGCACTGTGTCCAAGCTCTTaGGCCTGCCATGCAGTCTTCACTGGAGTTTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: MKLFASALCPSS*ACHAVFTGVCV Trigger: TACACAAACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCAAAAAGTTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGAGTCTTCACTGGAGTTaGTGTAGCATTCCCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GSNLAALLSVCREISIGQSLHWS*CSIPSF Trigger: GAAAGAGGGAATGCTACACAAACTCCAGTGAAGACT...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR GCA 72 bp | AGCCAGGTGAGGATTTCACACCCTAGTCACAATTTATaGTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAG | + |
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Preference number: 3 (lower is better) Translates to: SQVRISHPSHNL*YSSEPCESLHQ Trigger: CTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGGGTGTGAAATCCTCACCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGGTAGGGAAATCTCCATaGGTCAGTAGAACTCAACTT | + |
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Preference number: 3 (lower is better) Translates to: PSHNLCYSSEPCESLHQGVGKSP*VSRTQL Trigger: AAGTTGAGTTCTACTGACCAATGGAGATTTCCCTAC...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR TCA 72 bp | ACAGGGATGCCAAGTCTCCAGGACATTAAGTTTCCATaGAACTTTTTGCCTCAGCACTGTGTCCAAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: TGMPSLQDIKFP*NFLPQHCVQAL Trigger: AAGAGCTTGGACACAGTGCTGAGGCAAAAAGTTTCATGGAAACTTAATGTCCTGGAGACTTGGCATCCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR TCA 72 bp | TACCTGACTGTAATGAGGATTCTAAGTTTACTATTTTaGACTAGTCCTGAGATTTCTAGCTCCTATCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: YLTVMRILSLLF*TSPEISSSYLA Trigger: TGCCAGATAGGAGCTAGAAATCTCAGGACTAGTTCAAAATAGTAAACTTAGAATCCTCATTACAGTCAGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| 3UTR TCA 72 bp | ACAGAGAAGTTAGGTGACACATCAGCCAAGGTACATTaGAGTAATCTGACACAAAACAAAAGATGCATACAT | + |
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Preference number: 3 (lower is better) Translates to: TEKLGDTSAKVH*SNLTQNKRCIH Trigger: ATGTATGCATCTTTTGTTTTGTGTCAGATTACTTCAATGTACCTTGGCTGATGTGTCACCTAACTTCTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGGCATGGGCCATGGCTaGTGGGTAGAGTTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVGMGHG*WVELQG Trigger: ACCTTGCAACTCTACCCAGCAGCCATGGCCCATGCC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTCAGGTCTGGATGGTCTaGAGGCTGCTGGAGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVQVWMV*RLLETV Trigger: GACAGTCTCCAGCAGCCTCCAGACCATCCAGACCTG...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTTTTGCTGGGGTTAGTTaGAAGGTCTGGGCACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVFAGVS*KVWARL Trigger: CAGCCGTGCCCAGACCTTTCAACTAACCCCAGCAAA...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGCTGGAGGCTGTTGTTaGAAACCTCTGGGGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSAGGCC*KPLGSQ Trigger: CTGACTCCCCAGAGGTTTCCAACAACAGCCTCCAGC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGAGTTTGGACACCGCTaGGTAACATTGCTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVEFGHR*VTLLGS Trigger: TGACCCCAGCAATGTTACTCAGCGGTGTCCAAACTC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTAGGTTGGCATCGGGTTaGCTCTCCTTGCTGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSRLASG*LSLLLS Trigger: AGACAACAGCAAGGAGAGTCAACCCGATGCCAACCT...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGCAAGATCTGGACACTaGTGTGCACTGGAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSARSGH*CALESP Trigger: AGGTGACTCCAGTGCACAGCAGTGTCCAGATCTTGC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTCTTGAGTGGCTTTGCTaGAGACAGAGACATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVLEWLC*RQRHGR Trigger: CCTGCCATGTCTCTGTCTCCAGCAAAGCCACTCAAG...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGGTGCTGAAGAACCCTaGGATGTTGCCAATATGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSGAEEP*DVANMV Trigger: CACCATATTGGCAACATCTCAGGGTTCTTCAGCACC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVGGIWC*RTLRCC Trigger: GCAACATCTCAGGGTTCTTCAGCACCATATTCCACC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGCGGGACAGGCGGGGCTaGTCTGATAAGCCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQRDRRG*SDKPVP Trigger: AGGGACAGGCTTATCAGATCAGCCCCGCCTGTCCCG...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGCTGGGCTCTGTTTTTaGAGACTCCAGAGAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSAGLCF*RLQRSV Trigger: CACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGTTGCTGCAGACATCTaGGGACTATTACAACCACTG | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSVAADI*GLLQPL Trigger: CAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAAC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTATCCTATCTTTGCCTTaGGTGGCTTTGCTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSILSLP*VALLET Trigger: TGTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGAT...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTAGGGCTGGATACTGTTaGTGCAGATACATGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSRAGYC*CRYMRT Trigger: AGTCCTCATGTATCTGCAGCAACAGTATCCAGCCCT...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTAGCGGCTGTTCTTCCTaGTTTCTCCTTCTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVSGCSS*FLLLFS Trigger: AGAGAAGAGAAGGAGAAAGCAGGAAGAACAGCCGCT...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGCTGGATATTGTTGCTaGAGACACCTGAGGACTATT | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVAGYCC*RHLRTI Trigger: AATAGTCCTCAGGTGTCTGCAGCAACAATATCCAGC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTCCAGACTGGGGATTCTaGATTTCATTGTCCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSPDWGF*ISLSSN Trigger: GTTTGAGGACAATGAAATGCAGAATCCCCAGTCTGG...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTGGTCTGGAGGCTGCTaGAGACTGTCACTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQWSGGC*RLSLEA Trigger: TGCCTCCAGTGACAGTCTCCAGCAGCCTCCAGACCA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTTATCTTTGCCTTGAGTaGCTTTGCTGGAGACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVYLCLE*LCWRQR Trigger: TCTCTGTCTCCAGCAAAGCCACTCAAGGCAAAGATA...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGTCCCTAATCCAGACTaGGGATTCTGCATTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVVPNPD*GFCISL Trigger: CAATGAAATGCAGAATCCCCAGTCTGGATTAGGGAC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR TCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGACTGCTGGATACTGCTaGTGCAGGCACCTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQTAGYC*CRHLRT Trigger: TGTCCTCAGGTGCCTGCATCAGCAGTATCCAGCAGT...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGCAGGCTGGAGGTAAGTaGGAGAGGACTGGATTCCGA | + |
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Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGQAGGK*ERTGFR Trigger: TCGGAATCCAGTCCTCTCCCACTTACCTCCAGCCTG...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGGGTTCACCCTCAGCCTaGCTTGTGCTGGTTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQGSPSA*LVLVAE Trigger: TTCAGCAACCAGCACAAGCCAGGCTGAGGGTGAACC...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGCTTGAGTCATCTGAGTaGCCTGGACACTGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQLESSE*PGHCWA Trigger: AGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAG...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGACGGCTGGGCACTGTTaGTTGAGGCATCAAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGTAGHC*LRHQRS Trigger: ACTCCTTTGATGCCTCAAGCAACAGTGCCCAGCCGT...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTGCCTTGAGTGGCTTTaGTGGAGACAGAGACATGGC | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQCLEWL*WRQRHG Trigger: GCCATGTCTCTGTCTCCAGCAAAGCCACTCAAGGCA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGCGGGTTGACTCTCCTTaGTGTTGTCTGTGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQRVDSP*CCLWWR Trigger: TCTCCACCACAGACAACAGCAAGGAGAGTCAACCCG...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGGTTGTTGGAAACCTCTaGGGAGTCAGTGGTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQVVGNL*GVSGSP Trigger: GGGTGAACCACTGACTCCCCAGAGGTTTCCAACAAC...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGACTATTACAACCACTaGTCATTTTTGCTGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVDYYNH*SFLLGL Trigger: TAACCCCAGCAAAAATGACCAGTGGTTGTAATAGTC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTGACTATTACAACCAATaGTCATTGCTGCTAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ASALCPSSWACHAVFTGVDYYNQ*SLLLGS Trigger: TGAACCTAGCAGCAATGACCATTGGTTGTAATAGTC...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR GCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTCCTTCTCTTCTCTGTaGGGCTTTGTGTTCGGGACA | + |
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Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQSFSSL*GFVFGT Trigger: TGTCCCGAACACAAAGCCGCACAGAGAAGAGAAGGA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR TCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTTGTCCTCAAACTGGTaGTCCTTTACCAGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQLSSNW*SFTSWS Trigger: AGACCAGCTGGTAAAGGATCACCAGTTTGAGGACAA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGAGCTGTCACCATAGCTaGTTCTACTTCCCAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQSCHHS*FYFPSF Trigger: GAAGCTTGGGAAGTAGAACCAGCTATGGTGACAGCT...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTGGCAGGAAAACTCCTaGGCACTGTTACAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQWQENS*ALLQKT Trigger: TGTCTTCTGTAACAGTGCCCAGGAGTTTTCCTGCCA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR GCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGGAGGGTTACTGTAACTaGTGTATACTGTTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGEGYCN*CILLLQ Trigger: CTGCAGCAACAGTATACAGCAGTTACAGTAACCCTC...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGAGAGTCTCTTCATTTTaGTTGCAAGCGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGRVSSF*LQAAVL Trigger: AAGAACAGCCGCTTGCAACCAAAATGAAGAGACTCT...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR GCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGAGAACCCTGAGATGTTaGCAATATGGTGGACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGRTLRC*QYGGQY Trigger: ATATTGTCCACCATATTGGCAACATCTCAGGGTTCT...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGAAAACTGTGTTGTCATaGTATCAGGTGATTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSNLAALLSVCREISIGQKTVLS*YQVIQG Trigger: TCCCTGAATCACCTGATACCATGACAACACAGTTTT...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGCTATTAAAGCAAGCATaGCCAAAAACATTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGLLKQA*PKTLSL Trigger: CAGAGACAATGTTTTTGGCCATGCTTGCTTTAATAG...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| 3UTR CAA 72 bp | ATACAGATCCATTCACCAACTAACACAAGAACAAGTTaGGAGCATTCATGCTACAGGGATGCCAAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQIHSPTNTRTS*EHSCYRDAKSP Trigger: TGGAGACTTGGCATCCCTGTAGCATGAATGCTCCAAACTTGTTCTTGTGTTAGTTGGTGAATGGATCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CCA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGTATTATTGTAACTGCTaGATATTGTTGCTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSHNLCYSSEPCESLHQGYYCNC*ILLLQT Trigger: TGTCTGCAGCAACAATATCCAGCAGTTACAATAATA...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS CCA 90 bp | TTCTGTAGGCTCCAGGGGTGTCTGGAGACTGCTGGAGGCTGTTGTTaGAAACCTCTGGGGAGTCAGTGGTTCACCCTCAGCCTGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCRLQGCLETAGGCC*KPLGSQWFTLSLAC Trigger: ACAAGCCAGGCTGAGGGTGAACCACTGACTCCCCAGAGGTTTCCAACAACAGCCTCCAGCAGTCTCCAGACACCCCTGGAGCCTACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTCACGGCTGGGCACTGTaGCTTGAGGCATCAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASALCPSSWACHAVFTGVHGWAL*LEASKE Trigger: CTCCTTTGATGCCTCAAGCAACAGTGCCCAGCCGTG...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS CCA 90 bp | TGCTGCAGACACCTGAGGACTATTACAGGCATGGGCCATGGCTGCTaGGTAGAGTTGCAAGGTCTGGGCATTTCGGGGAAATGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCRHLRTITGMGHGC*VELQGLGISGKCCW Trigger: CCAGCAACATTTCCCCGAAATGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCATGCCTGTAATAGTCCTCAGGTGTCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTAAGGAAGTGTTGAGGTaGCCTGACAGGTCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSKEVLR*PDRSGW Trigger: CCATCCAGACCTGTCAGGCAACCTCAACACTTCCTT...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTCATTTCGGGGAAATGTaGCTGGAGTCACCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASALCPSSWACHAVFTGVHFGEM*LESPKG Trigger: ACCCTTGGGTGACTCCAGCAACATTTCCCCGAAATG...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CAA 90 bp | GCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTTCCTGGCTTGTGCTGGTaGCTGAAAGTAATGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ASALCPSSWACHAVFTGVPGLCW*LKVMET Trigger: AGTTTCCATTACTTTCAGCAACCAGCACAAGCCAGG...AACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGTCTCTTCATTTTGGTaGCAAGCGGCTGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSVSSFW*QAAVLP Trigger: AGGAAGAACAGCCGCTTGCAACCAAAATGAAGAGAC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGCACTGTGTCCAAGCTCTTGGGCCTGCCATGCAGTCTTCACTGGAGTGAGAGTCTCTTCATTTaGGTTGCAAGCGGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSTVSKLLGLPCSLHWSESLFI*VASGCS Trigger: AGAACAGCCGCTTGCAACCAAAATGAAGAGACTCTC...ACTCCAGTGAAGACTGCATGGCAGGCCCAAGAGCTTGGACACAGTGCTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS TCA 90 bp | TGTTTTTGGAGACTCCAGAGAAGTGTGGTGACTACAAGGAAGTGTTaGGGTTGCCTGACAGGTCTGGATGGTCTGGAGGCTGCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CFWRLQRSVVTTRKC*GCLTGLDGLEAAGD Trigger: GTCTCCAGCAGCCTCCAGACCATCCAGACCTGTCAGGCAACCTCAACACTTCCTTGTAGTCACCACACTTCTCTGGAGTCTCCAAAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 90 bp | GTTGCCAATATGGTGGACAATATTTCTGTAGGCTCCAGGGGTGTCTaGAGACTGCTGGAGGCTGTTGTTGGAAACCTCTGGGGAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VANMVDNISVGSRGV*RLLEAVVGNLWGVS Trigger: ACTGACTCCCCAGAGGTTTCCAACAACAGCCTCCAGCAGTCTCCAGACACCCCTGGAGCCTACAGAAATATTGTCCACCATATTGGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGGACTGCTGGAGGCTGTaGTTGGAAACCTCTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYSSEPCESLHQGDCWRL*LETSGE Trigger: CTCCCCAGAGGTTTCCAACAACAGCCTCCAGCAGTC...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS GCA 90 bp | GACCACTTGCCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTaGTGGGCTCTGTTTTTGGAGACTCCAGAGAAGTGTGGTGACTAC | + |
|
Preference number: 5 (lower is better) Translates to: DHLPLLLESSEWPGH*WALFLETPEKCGDY Trigger: GTAGTCACCACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 90 bp | GTCTGTAGCACCCAGATGAGATCCTATCTTTGCCTTGAGTGGCTTTaGTGGAGACAGAGACATGGCAGGAAAACTCCTGGGCACTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VCSTQMRSYLCLEWL*WRQRHGRKTPGHCY Trigger: GTAACAGTGCCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGATCTCATCTGGGTGCTACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 90 bp | GATAGGGAGAGTCTCTTCATTTTGGTTGCAAGCGGCTGTTCTTCCTaGTTTCTCCTTCTCTTCTCTGTGCGGCTTTGTGTTCGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRESLFILVASGCSS*FLLLFSVRLCVRDR Trigger: CCTGTCCCGAACACAAAGCCGCACAGAGAAGAGAAGGAGAAAGCAGGAAGAACAGCCGCTTGCAACCAAAATGAAGAGACTCTCCCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 90 bp | GCTGTTGTTGGAAACCTCTGGGGAGTCAGTGGTTCACCCTCAGCCTaGCTTGTGCTGGTTGCTGAAAGTAATGGAAACTTAGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVVGNLWGVSGSPSA*LVLVAESNGNLGFS Trigger: GGAAAAGCCTAAGTTTCCATTACTTTCAGCAACCAGCACAAGCCAGGCTGAGGGTGAACCACTGACTCCCCAGAGGTTTCCAACAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGCACCCTCAGCCTGGCTaGTGCTGGTTGCTGAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSNLAALLSVCREISIGQHPQPG*CWLLKV Trigger: TACTTTCAGCAACCAGCACAAGCCAGGCTGAGGGTG...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS CCA 90 bp | CACTTGCCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTGCTaGGCTCTGTTTTTGGAGACTCCAGAGAAGTGTGGTGACTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLPLLLESSEWPGHC*ALFLETPEKCGDYK Trigger: CTTGTAGTCACCACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 90 bp | TGTAGCACCCAGATGAGATCCTATCTTTGCCTTGAGTGGCTTTGCTaGAGACAGAGACATGGCAGGAAAACTCCTGGGCACTGTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSTQMRSYLCLEWLC*RQRHGRKTPGHCYR Trigger: TCTGTAACAGTGCCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGATCTCATCTGGGTGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 90 bp | ATCCTTTACCAGCTGGTCTGTAGCACCCAGATGAGATCCTATCTTTaGCTTGAGTGGCTTTGCTGGAGACAGAGACATGGCAGGAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ILYQLVCSTQMRSYL*LEWLCWRQRHGRKT Trigger: AGTTTTCCTGCCATGTCTCTGTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGATCTCATCTGGGTGCTACAGACCAGCTGGTAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 90 bp | TGCTGTATACTGTTGCTGCAGACATCTGAGGACTATTACAACCACTaGTCATTTTTGCTGGGGTTAGTTGAAAGGTCTGGGCACGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCILLLQTSEDYYNH*SFLLGLVERSGHGW Trigger: CCAGCCGTGCCCAGACCTTTCAACTAACCCCAGCAAAAATGACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGTGCTGGGCTCTGTTTTaGGAGACTCCAGAGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYSSEPCESLHQGCWALF*ETPEKC Trigger: ACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGCA...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGAAGGGCTGGATACTGTaGCTGCAGATACATGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYSSEPCESLHQGKGWIL*LQIHED Trigger: GTCCTCATGTATCTGCAGCAACAGTATCCAGCCCTT...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGAACTGCTGGATATTGTaGCTGCAGACACCTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYSSEPCESLHQGNCWIL*LQTPED Trigger: GTCCTCAGGTGTCTGCAGCAACAATATCCAGCAGTT...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCACAATTTATGCTATTCCTCTGAGCCTTGTGAAAGCTTGCACCAGGGGGATCCTATCTTTGCCTaGAGTGGCTTTGCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSHNLCYSSEPCESLHQGDPIFA*SGFAGD Trigger: GTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGATC...CCCCTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATAAATTGTGACTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
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| CDS TCA 90 bp | CATTGCTGGGGTCACCTGAGGTTTAATGAAACTGCTGGATACTGCTaGTGCAGGCACCTGAGGACAATTATGACCACTTGCCTTTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: HCWGHLRFNETAGYC*CRHLRTIMTTCLYC Trigger: GCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTGCATCAGCAGTATCCAGCAGTTTCATTAAACCTCAGGTGACCCCAGCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGTGTAACTGCTGGATATaGTTGCTGCAGACACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSNLAALLSVCREISIGQCNCWI*LLQTPE Trigger: CTCAGGTGTCTGCAGCAACAATATCCAGCAGTTACA...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS TCA 90 bp | CACTGGAGGCACCCGAGAAGATTTGTCACAGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTGCCAATATGGTGGACAATATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HWRHPRRFVTGGIWC*RTLRCCQYGGQYFC Trigger: ACAGAAATATTGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGAACCACTGGTCATTTTaGCTGGGGTTAGTTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSNLAALLSVCREISIGQNHWSF*LGLVER Trigger: CCTTTCAACTAACCCCAGCAAAAATGACCAGTGGTT...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS-3UTR CAA 90 bp | GGGAGTAACCTGGCTGCTCTTTTAAGTGTCTGTAGGGAAATCTCCATTGGTCAGGCATGGCCAAAAACATaGTCTCTGATGAAAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSNLAALLSVCREISIGQAWPKT*SLMKAC Trigger: ACAAGCTTTCATCAGAGACAATGTTTTTGGCCATGC...CTGACCAATGGAGATTTCCCTACAGACACTTAAAAGAGCAGCCAGGTTACTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085876.12 |
||
| CDS CCA 72 bp | GTCTGGAGACTGCTGGAGGCTGTTGTTGGAAACCTCTaGGGAGTCAGTGGTTCACCCTCAGCCTGGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VWRLLEAVVGNL*GVSGSPSAWLV Trigger: CACAAGCCAGGCTGAGGGTGAACCACTGACTCCCCAGAGGTTTCCAACAACAGCCTCCAGCAGTCTCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS TCA 72 bp | TTCTCTGTGCGGCTTTGTGTTCGGGACAGGCGGGGCTaGTCTGATAAGCCTGTCCCTAATCCAGACTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSVRLCVRDRRG*SDKPVPNPDWG Trigger: TCCCCAGTCTGGATTAGGGACAGGCTTATCAGATCAGCCCCGCCTGTCCCGAACACAAAGCCGCACAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS CCA 72 bp | GGTCTGGATGGTCTGGAGGCTGCTGGAGACTGTCACTaGAGGCACCCGAGAAGATTTGTCACAGGTGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: GLDGLEAAGDCH*RHPRRFVTGGI Trigger: TATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGTCTCCAGCAGCCTCCAGACCATCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS CAA 72 bp | CCAGAGAAGTGTGGTGACTACAAGGAAGTGTTGAGGTaGCCTGACAGGTCTGGATGGTCTGGAGGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PEKCGDYKEVLR*PDRSGWSGGCW Trigger: CCAGCAGCCTCCAGACCATCCAGACCTGTCAGGCAACCTCAACACTTCCTTGTAGTCACCACACTTCTCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS CAA 90 bp | GCCTCACGAGTCAGCTTCTTTAGTTGTCCCCAGGTTGGCATCGGGTaGACTCTCCTTGCTGTTGTCTGTGGTGGAGATAGGGAGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASRVSFFSCPQVGIG*TLLAVVCGGDRESL Trigger: GAGACTCTCCCTATCTCCACCACAGACAACAGCAAGGAGAGTCAACCCGATGCCAACCTGGGGACAACTAAAGAAGCTGACTCGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS CAA 72 bp | ACTATTACAGGCATGGGCCATGGCTGCTGGGTAGAGTaGCAAGGTCTGGGCATTTCGGGGAAATGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TITGMGHGCWVE*QGLGISGKCCW Trigger: CCAGCAACATTTCCCCGAAATGCCCAGACCTTGCAACTCTACCCAGCAGCCATGGCCCATGCCTGTAATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
||
| CDS CAA 90 bp | TTGGAGACTCCAGAGAAGTGTGGTGACTACAAGGAAGTGTTGAGGTaGCCTGACAGGTCTGGATGGTCTGGAGGCTGCTGGAGACTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LETPEKCGDYKEVLR*PDRSGWSGGCWRLS Trigger: TGACAGTCTCCAGCAGCCTCCAGACCATCCAGACCTGTCAGGCAACCTCAACACTTCCTTGTAGTCACCACACTTCTCTGGAGTCTCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | ATGGTGGACAATATTTCTGTAGGCTCCAGGGGTGTCTaGAGACTGCTGGAGGCTGTTGTTGGAAACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MVDNISVGSRGV*RLLEAVVGNLW Trigger: CCAGAGGTTTCCAACAACAGCCTCCAGCAGTCTCCAGACACCCCTGGAGCCTACAGAAATATTGTCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | GGTAGAGTTGCAAGGTCTGGGCATTTCGGGGAAATGTaGCTGGAGTCACCCAAGGGTTATTGTAAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRVARSGHFGEM*LESPKGYCKGW Trigger: CCAGCCCTTACAATAACCCTTGGGTGACTCCAGCAACATTTCCCCGAAATGCCCAGACCTTGCAACTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 90 bp | CTGTTTTTGGAGACTCCAGAGAAGTGTGGTGACTACAAGGAAGTGTaGAGGTTGCCTGACAGGTCTGGATGGTCTGGAGGCTGCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LFLETPEKCGDYKEV*RLPDRSGWSGGCWR Trigger: TCTCCAGCAGCCTCCAGACCATCCAGACCTGTCAGGCAACCTCAACACTTCCTTGTAGTCACCACACTTCTCTGGAGTCTCCAAAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 90 bp | TGCTGGATACTGCTGATGCAGGCACCTGAGGACAATTATGACCACTaGCCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CWILLMQAPEDNYDH*PLLLESSEWPGHCW Trigger: CCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTGCATCAGCAGTATCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | ACCCAGATGAGATCCTATCTTTGCCTTGAGTGGCTTTaGTGGAGACAGAGACATGGCAGGAAAACTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TQMRSYLCLEWL*WRQRHGRKTPG Trigger: CCCAGGAGTTTTCCTGCCATGTCTCTGTCTCCAGCAAAGCCACTCAAGGCAAAGATAGGATCTCATCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | CTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTaGAATATGGTGCTGAAGAACCCTGAGATGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLEAPEKICHR*NMVLKNPEMLP Trigger: TGGCAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | CCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTaGTGGGCTCTGTTTTTGGAGACTCCAGAGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PLLLESSEWPGH*WALFLETPEKC Trigger: ACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | TTATTGCTTGAGTCATCTGAGTGGCCTGGACACTGCTaGGCTCTGTTTTTGGAGACTCCAGAGAAGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLESSEWPGHC*ALFLETPEKCG Trigger: ACCACACTTCTCTGGAGTCTCCAAAAACAGAGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | AGCATGGCCAAAAACATTGTCTCTGATGAAAGCTTGTaGCCCGTTCTCTGTACTAGTCCCTCCGCCTCACGA | + |
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Preference number: 6 (lower is better) Translates to: SMAKNIVSDESL*PVLCTSPSASR Trigger: TCGTGAGGCGGAGGGACTAGTACAGAGAACGGGCAACAAGCTTTCATCAGAGACAATGTTTTTGGCCATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | GCAAGCATGGCCAAAAACATTGTCTCTGATGAAAGCTaGTTGCCCGTTCTCTGTACTAGTCCCTCCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASMAKNIVSDES*LPVLCTSPSAS Trigger: TGAGGCGGAGGGACTAGTACAGAGAACGGGCAACAAGCTTTCATCAGAGACAATGTTTTTGGCCATGCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 90 bp | ATTAAAGCAAGCATGGCCAAAAACATTGTCTCTGATGAAAGCTTGTaGCCCGTTCTCTGTACTAGTCCCTCCGCCTCACGAGTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IKASMAKNIVSDESL*PVLCTSPSASRVSF Trigger: GAAGCTGACTCGTGAGGCGGAGGGACTAGTACAGAGAACGGGCAACAAGCTTTCATCAGAGACAATGTTTTTGGCCATGCTTGCTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS TCA 72 bp | CACCCGAGAAGATTTGTCACAGGTGGAATATGGTGCTaGAGAACCCTGAGATGTTGCCAATATGGTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: HPRRFVTGGIWC*RTLRCCQYGGQ Trigger: TTGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGCACCATATTCCACCTGTGACAAATCTTCTCGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | CTGTTGCTGCAGACATCTGAGGACTATTACAACCACTaGTCATTTTTGCTGGGGTTAGTTGAAAGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLLQTSEDYYNH*SFLLGLVERSG Trigger: CCCAGACCTTTCAACTAACCCCAGCAAAAATGACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | GAGTCACCTGAGGGTTACTGTAACTGCTGTATACTGTaGCTGCAGACATCTGAGGACTATTACAACCACTGG | + |
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Preference number: 6 (lower is better) Translates to: ESPEGYCNCCIL*LQTSEDYYNHW Trigger: CCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCAGTTACAGTAACCCTCAGGTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | CACCTGAGGGTTACTGTAACTGCTGTATACTGTTGCTaGAGACATCTGAGGACTATTACAACCACTGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLRVTVTAVYCC*RHLRTITTTGH Trigger: ATGACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCAGTTACAGTAACCCTCAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | AGTCACCTGAGGGTTACTGTAACTGCTGTATACTGTTaGTGCAGACATCTGAGGACTATTACAACCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: SHLRVTVTAVYC*CRHLRTITTTG Trigger: ACCAGTGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTATACAGCAGTTACAGTAACCCTCAGGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | GAGTCACCCAAGGGTTATTGTAAGGGCTGGATACTGTaGCTGCAGATACATGAGGACTATTACAACCAATGG | + |
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Preference number: 6 (lower is better) Translates to: ESPKGYCKGWIL*LQIHEDYYNQW Trigger: CCATTGGTTGTAATAGTCCTCATGTATCTGCAGCAACAGTATCCAGCCCTTACAATAACCCTTGGGTGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 90 bp | ATACTGTTGCTGCAGATACATGAGGACTATTACAACCAATGGTCATaGCTGCTAGGTTCATTTGCAAGATCTGGACACTGCTGTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: ILLLQIHEDYYNQWS*LLGSFARSGHCCAL Trigger: CAGTGCACAGCAGTGTCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTGGTTGTAATAGTCCTCATGTATCTGCAGCAACAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | CTGTTACAGAAGACACCTGAGGGGTATTATTGTAACTaGTGGATATTGTTGCTGCAGACACCTGAGGACTAT | + |
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Preference number: 6 (lower is better) Translates to: LLQKTPEGYYCN*WILLLQTPEDY Trigger: ATAGTCCTCAGGTGTCTGCAGCAACAATATCCAGCAGTTACAATAATACCCCTCAGGTGTCTTCTGTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | TTCTACTTCCCAAGCTTCCATCAGGCTGGAGGTAAGTaGGAGAGGACTGGATTCCGATTTTATTTTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FYFPSFHQAGGK*ERTGFRFYFGF Trigger: AAAACCAAAATAAAATCGGAATCCAGTCCTCTCCCACTTACCTCCAGCCTGATGGAAGCTTGGGAAGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CAA 72 bp | AAGACACCTGAGGGGTATTATTGTAACTGCTGGATATaGTTGCTGCAGACACCTGAGGACTATTACAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KTPEGYYCNCWI*LLQTPEDYYRH Trigger: ATGCCTGTAATAGTCCTCAGGTGTCTGCAGCAACAATATCCAGCAGTTACAATAATACCCCTCAGGTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | CTGTTGCTGCAGATACATGAGGACTATTACAACCAATaGTCATTGCTGCTAGGTTCATTTGCAAGATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLLQIHEDYYNQ*SLLLGSFARSG Trigger: TCCAGATCTTGCAAATGAACCTAGCAGCAATGACCATTGGTTGTAATAGTCCTCATGTATCTGCAGCAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | TTACAGAAGACACCTGAGGGGTATTATTGTAACTGCTaGATATTGTTGCTGCAGACACCTGAGGACTATTAC | + |
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Preference number: 6 (lower is better) Translates to: LQKTPEGYYCNC*ILLLQTPEDYY Trigger: GTAATAGTCCTCAGGTGTCTGCAGCAACAATATCCAGCAGTTACAATAATACCCCTCAGGTGTCTTCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS GCA 72 bp | TTTCTCCATCTCTTTTCTAAGTATATCAACACGAGCTaGAAGTTCTGGAATGTCTTCACATACTTCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: FLHLFSKYINTS*KFWNVFTYFYQ Trigger: CTGATAGAAGTATGTGAAGACATTCCAGAACTTGCAGCTCGTGTTGATATACTTAGAAAAGAGATGGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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| CDS CCA 72 bp | CTCTTTTCTAAGTATATCAACACGAGCTGCAAGTTCTaGAATGTCTTCACATACTTCTATCAGTTTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LFSKYINTSCKF*NVFTYFYQFAQ Trigger: TTGAGCAAACTGATAGAAGTATGTGAAGACATTCCAGAACTTGCAGCTCGTGTTGATATACTTAGAAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085876.12 ENSMUST00000169857.2 |
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