Pregenerated sensors for IFI206 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037849Ensembl transcript IDs: ENSMUST00000160565.4, ENSMUST00000169797.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCAGGGGTGTCTGGAGACTGCTGGAGGCTGTTGTTGGAAATCTCTaGGGAGTCAGGGGTTCACCCTCAGCCTGGCTTGTGCTGGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SRGVWRLLEAVVGNL*GVRGSPSAWLVLVV Trigger: AACAACCAGCACAAGCCAGGCTGAGGGTGAACCCCTGACTCCTCAGAGATTTCCAACAACAGCCTCCAGCAGTCTCCAGACACCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | AACCACTGGACCATCTTGATGGGGTCAGTTGAAAGCTCTGGCCACTaGTGGCCACTGTTGCTGGAGTCACCCGAGGGTTACTGTAACTGC | + |
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Preference number: 5 (lower is better) Translates to: NHWTILMGSVESSGH*WPLLLESPEGYCNC Trigger: GCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGTCCAGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | GAAGTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGAGTGCTGCTaGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EVLRLPDMSGWSECC*RLSLEAPEKICHRW Trigger: CCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCACTCAGACCATCCAGACATGTCTGGCAACCTCAACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | CACTGGACCATCTTGATGGGGTCAGTCGAAAGCTCTGGCCACTGCTaGCCACTGTTACTGGAGTCACCCGAGGGTTACTGTAACTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: HWTILMGSVESSGHC*PLLLESPEGYCNCC Trigger: ACAGCAGTTACAGTAACCCTCGGGTGACTCCAGTAACAGTGGCCAGCAGTGGCCAGAGCTTTCGACTGACCCCATCAAGATGGTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | CACTGGACCATCTTGATGGGGTCAGTTGAAAGCTCTGGCCACTGCTaGCCACTGTTGCTGGAGTCACCCGAGGGTTACTGTAACTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: HWTILMGSVESSGHC*PLLLESPEGYCNCC Trigger: ACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGTCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | TACAAGGAAGTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGAGTaGTGCTGGAGGCTGTCACTGGAGGCACCCGAGAAGATTTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: YKEVLRLPDMSGWSE*CWRLSLEAPEKICH Trigger: GTGACAAATCTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCACTCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | CACTGCTGGCCACTGTTGCTGGAGTCACCCGAGGGTTACTGTAATTaGTGTGTACTGTTGCTGCAGAGATCTGAGGACTGTTACAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: HCWPLLLESPEGYCN*CVLLLQRSEDCYSH Trigger: ATGGCTGTAACAGTCCTCAGATCTCTGCAGCAACAGTACACAGCAATTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | GGGCCATTGCTGCTGGGGTCATTTGAAAGATCATTTGAAAGGCACTaGTGGGCACTGCTACTTGAGGAATCAAAAGGGACTGGGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: GPLLLGSFERSFERH*WALLLEESKGTGHF Trigger: GAAGTGCCCAGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | TGCTGCAGAGATCTGAGGACTATTACAGCCATGGGCCATTGCTGCTaGGGTCATTTGAAAGATCATTTGAAAGGCACTGCTGGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: CCRDLRTITAMGHCC*GHLKDHLKGTAGHC Trigger: GCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCATGGCTGTAATAGTCCTCAGATCTCTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | TGCTGCAGAGATCTGAGGACTGTTACAGCCATTGGCCATTGCTGCTaGGGTCATTTGAAAGATCATTTGAAAGGCACTGCTGGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: CCRDLRTVTAIGHCC*GHLKDHLKGTAGHC Trigger: GCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAATGGCTGTAACAGTCCTCAGATCTCTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 90 bp | TGTTGCTGCAGAAACATGAGGACTATTAAAACCACTGGACCATCTTaGTGGGGTCAGTCGAAAGCTCTGGCCACTGCTGGCCACTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: CCCRNMRTIKTTGPS*WGQSKALATAGHCY Trigger: GTAACAGTGGCCAGCAGTGGCCAGAGCTTTCGACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAGTCCTCATGTTTCTGCAGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 90 bp | TGTTGCTGCAGAAACATGAGGACTATTAAAACCACTGGACCATCTTaGTGGGGTCAGTTGAAAGCTCTGGCCACTGCTGGCCACTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CCCRNMRTIKTTGPS*WGQLKALATAGHCC Trigger: GCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAGTCCTCATGTTTCTGCAGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | GCTGGGCACTGCTACTTGAGGAATCAAAAGGGACTGGGCACTTCTTaGCACTGTTGCTGGAGTTACCTGAGGGTTATTATAACTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: AGHCYLRNQKGLGTS*HCCWSYLRVIITAG Trigger: TCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAAGTGCCCAGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | TGCTGGGGTCACCTGAGGTTTAATGAAACTGCTGGATACTGGTGCTaGAGGCACCTGAGGACAATTATGACCACTTGCCTTTATTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CWGHLRFNETAGYWC*RHLRTIMTTCLYCL Trigger: CAAGCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTGCAGCACCAGTATCCAGCAGTTTCATTAAACCTCAGGTGACCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | CATTGCTGGGGTCACCTGAGGTTTAATGAAACTGCTGGATACTGGTaGTGCAGGCACCTGAGGACAATTATGACCACTTGCCTTTATTGC | + |
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Preference number: 5 (lower is better) Translates to: HCWGHLRFNETAGYW*CRHLRTIMTTCLYC Trigger: GCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTGCAGCACCAGTATCCAGCAGTTTCATTAAACCTCAGGTGACCCCAGCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | TGTTGCTGCAGACATCTGAGGACTATTACAACCATTGGTCATTGTTaGTGGGTTCATTTCAAAGGTCTGGGCACAGCTGGGCACTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CCCRHLRTITTIGHC*WVHFKGLGTAGHCC Trigger: GCAACAGTGCCCAGCTGTGCCCAGACCTTTGAAATGAACCCAGCAACAATGACCAATGGTTGTAATAGTCCTCAGATGTCTGCAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | TGCTGCAGACATCTGAGGACTATTACAACCATTGGTCATTGTTGCTaGGTTCATTTCAAAGGTCTGGGCACAGCTGGGCACTGTTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CCRHLRTITTIGHCC*VHFKGLGTAGHCCL Trigger: CAAGCAACAGTGCCCAGCTGTGCCCAGACCTTTGAAATGAACCCAGCAACAATGACCAATGGTTGTAATAGTCCTCAGATGTCTGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 90 bp | ACCCGAGAAGATTTGTCACAGGTGGAATATGGTACTGAAGAACCCTaGGATGTTGCCAATATGGTGGACGATATTTCTGGAGGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TREDLSQVEYGTEEP*DVANMVDDISGGSR Trigger: CCTGGAGCCTCCAGAAATATCGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGTACCATATTCCACCTGTGACAAATCTTCTCGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 90 bp | CACTGGAGGCACCCGAGAAGATTTGTCACAGGTGGAATATGGTACTaGAGAACCCTGAGATGTTGCCAATATGGTGGACGATATTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: HWRHPRRFVTGGIWY*RTLRCCQYGGRYFW Trigger: CCAGAAATATCGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGTACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | TTCTTGGCACTGTTGCTGGAGTTACCTGAGGGTTATTATAACTGCTaGATATTGTTGCTGCAGACATCTGAGGACTGTTACAACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: FLALLLELPEGYYNC*ILLLQTSEDCYNHW Trigger: CCAGTGGTTGTAACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 90 bp | AACACCTTCACTCTGAAGAATTCAGTTTCCGTAGCCACGGTGGCATaGAACATTCTTTTGTCTTTTCTAATGTCATATGTGAATGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: NTFTLKNSVSVATVA*NILLSFLMSYVNGS Trigger: AGAGCCATTCACATATGACATTAGAAAAGACAAAAGAATGTTCCATGCCACCGTGGCTACGGAAACTGAATTCTTCAGAGTGAAGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 90 bp | AAATGTTCCTGCTCTTTGTGTACAAAGAGTACTAATTTTAGGTGTTaGGTTGGCTTTTTGTCTCAGGGAAGTTGGGATATTCATCACATT | + |
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Preference number: 5 (lower is better) Translates to: KCSCSLCTKSTNFRC*VGFLSQGSWDIHHI Trigger: AATGTGATGAATATCCCAACTTCCCTGAGACAAAAAGCCAACGCAACACCTAAAATTAGTACTCTTTGTACACAAAGAGCAGGAACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
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| CDS TCA 72 bp | GGAAGTGTTGAGGTTGCCAGACATGTCTGGATGGTCTaGGTGCTGCTGGAGGCTGTCACTGGAGGCACCCGA | + |
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Preference number: 6 (lower is better) Translates to: GSVEVARHVWMV*VLLEAVTGGTR Trigger: TCGGGTGCCTCCAGTGACAGCCTCCAGCAGCACTCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | GTGTTGAGGTTGCCAGACATGTCTGGATGGTCTGAGTaGTGCTGGAGGCTGTCACTGGAGGCACCCGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLRLPDMSGWSE*CWRLSLEAPEK Trigger: CTTCTCGGGTGCCTCCAGTGACAGCCTCCAGCAGCACTCAGACCATCCAGACATGTCTGGCAACCTCAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | ACCATCTTGATGGGGTCAGTCGAAAGCTCTGGCCACTaGTGGCCACTGTTACTGGAGTCACCCGAGGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: TILMGSVESSGH*WPLLLESPEGY Trigger: GTAACCCTCGGGTGACTCCAGTAACAGTGGCCAGCAGTGGCCAGAGCTTTCGACTGACCCCATCAAGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | GGTCAGTTGAAAGCTCTGGCCACTGCTGGCCACTGTTaGTGGAGTCACCCGAGGGTTACTGTAACTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GQLKALATAGHC*WSHPRVTVTAV Trigger: CACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | ACCATCTTGATGGGGTCAGTTGAAAGCTCTGGCCACTaGTGGCCACTGTTGCTGGAGTCACCCGAGGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: TILMGSVESSGH*WPLLLESPEGY Trigger: GTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 72 bp | GGGTCAGTTGAAAGCTCTGGCCACTGCTGGCCACTGTaGCTGGAGTCACCCGAGGGTTACTGTAACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSVESSGHCWPL*LESPEGYCNCC Trigger: ACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | ACCCTGAGATGTTGCCAATATGGTGGACGATATTTCTaGAGGCTCCAGGGGTGTCTGGAGACTGCTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TLRCCQYGGRYF*RLQGCLETAGG Trigger: GCCTCCAGCAGTCTCCAGACACCCCTGGAGCCTCCAGAAATATCGTCCACCATATTGGCAACATCTCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CAGTCGAAAGCTCTGGCCACTGCTGGCCACTGTTACTaGAGTCACCCGAGGGTTACTGTAACTGCTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QSKALATAGHCY*SHPRVTVTAVY Trigger: GTACACAGCAGTTACAGTAACCCTCGGGTGACTCCAGTAACAGTGGCCAGCAGTGGCCAGAGCTTTCGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | ATCTTGATGGGGTCAGTCGAAAGCTCTGGCCACTGCTaGCCACTGTTACTGGAGTCACCCGAGGGTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: ILMGSVESSGHC*PLLLESPEGYC Trigger: ACAGTAACCCTCGGGTGACTCCAGTAACAGTGGCCAGCAGTGGCCAGAGCTTTCGACTGACCCCATCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CAGTTGAAAGCTCTGGCCACTGCTGGCCACTGTTGCTaGAGTCACCCGAGGGTTACTGTAACTGCTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QLKALATAGHCC*SHPRVTVTAVY Trigger: GTACACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | ATCTTGATGGGGTCAGTTGAAAGCTCTGGCCACTGCTaGCCACTGTTGCTGGAGTCACCCGAGGGTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: ILMGSVESSGHC*PLLLESPEGYC Trigger: ACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CATCTGAGGACTGTTACAACCACTGGTCATTGCTGCTaGGGTCTGTCGCAAGGTTTGGGCATTGTGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: HLRTVTTTGHCC*GLSQGLGIVGH Trigger: GTGCCCCACAATGCCCAAACCTTGCGACAGACCCCAGCAGCAATGACCAGTGGTTGTAACAGTCCTCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | GTTCATTTCAAAGGTCTGGGCACAGCTGGGCACTGTTaGTTGAGGCATCAAAGGAGCTTGGACACCGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VHFKGLGTAGHC*LRHQRSLDTAE Trigger: CTCAGCGGTGTCCAAGCTCCTTTGATGCCTCAAGCAACAGTGCCCAGCTGTGCCCAGACCTTTGAAATGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | TACAAGGAAGTGTTGAGGTTGCCAGACATGTCTGGATaGTCTGAGTGCTGCTGGAGGCTGTCACTGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: YKEVLRLPDMSG*SECCWRLSLEA Trigger: TGCCTCCAGTGACAGCCTCCAGCAGCACTCAGACCATCCAGACATGTCTGGCAACCTCAACACTTCCTTGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CATCTGAGGACTGTTACAACCACTGGTCATTGCTGCTaGGGTCTGTTGCAAGGTTTGGGCATTGTGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: HLRTVTTTGHCC*GLLQGLGIVGH Trigger: GTGCCCCACAATGCCCAAACCTTGCAACAGACCCCAGCAGCAATGACCAGTGGTTGTAACAGTCCTCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 90 bp | ATCTTGATGGGGTCAGTTGAAAGCTCTGGCCACTGCTGGCCACTGTaGCTGGAGTCACCCGAGGGTTACTGTAACTGCTGTGTACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILMGSVESSGHCWPL*LESPEGYCNCCVLL Trigger: CAACAGTACACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 72 bp | ATTTCAAAGGTCTGGGCACAGCTGGGCACTGTTGCTTaGGGCATCAAAGGAGCTTGGACACCGCTGAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: ISKVWAQLGTVA*GIKGAWTPLSN Trigger: GTTACTCAGCGGTGTCCAAGCTCCTTTGATGCCTCAAGCAACAGTGCCCAGCTGTGCCCAGACCTTTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | TGCAGACATCTGAGGACTGTTACAACCACTGGTCATTaGTGCTGGGGTCTGTCGCAAGGTTTGGGCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: CRHLRTVTTTGH*CWGLSQGLGIV Trigger: CACAATGCCCAAACCTTGCGACAGACCCCAGCAGCAATGACCAGTGGTTGTAACAGTCCTCAGATGTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 90 bp | TGCTGGATACTGGTGCTGCAGGCACCTGAGGACAATTATGACCACTaGCCTTTATTGCTTGAGTCATCTGAGTGGCCTGGACACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CWILVLQAPEDNYDH*PLLLESSEWPGHCW Trigger: CCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCTGCAGCACCAGTATCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 90 bp | ATCTTGATGGGGTCAGTCGATAGCTCTGGTCACTGCTGGCCACTGTaGCTGGAGTCACCCGAGGGTTACTGTAATTGCTGTGTACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILMGSVDSSGHCWPL*LESPEGYCNCCVLL Trigger: CAACAGTACACAGCAATTACAGTAACCCTCGGGTGACTCCAGCAACAGTGGCCAGCAGTGACCAGAGCTATCGACTGACCCCATCAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 72 bp | CTATTAAAACCACTGGACCATCTTGATGGGGTCAGTTaGAAGCTCTGGCCACTGCTGGCCACTGTTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLKPLDHLDGVS*KLWPLLATVAG Trigger: TCCAGCAACAGTGGCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | AGGCACCTGAGGACAATTATGACCACTTGCCTTTATTaGTTGAGTCATCTGAGTGGCCTGGACACTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RHLRTIMTTCLY*LSHLSGLDTAG Trigger: CCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTCATAATTGTCCTCAGGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | CTGTTACAACCACTGGTCATTGCTGCTGGGGTCTGTTaGAAGGTTTGGGCATTGTGGGGCACTATTGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: LLQPLVIAAGVC*KVWALWGTIAR Trigger: TCTAGCAATAGTGCCCCACAATGCCCAAACCTTGCAACAGACCCCAGCAGCAATGACCAGTGGTTGTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | CCACTGTTGCTGGAGTCACCCGAGGGTTACTGTAACTaGTGTGTACTGTTGCTGCAGAGATCTGAGGACTAT | + |
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Preference number: 6 (lower is better) Translates to: PLLLESPEGYCN*CVLLLQRSEDY Trigger: ATAGTCCTCAGATCTCTGCAGCAACAGTACACAGCAGTTACAGTAACCCTCGGGTGACTCCAGCAACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | CCACTGTTGCTGGAGTCACCCGAGGGTTACTGTAATTaGTGTGTACTGTTGCTGCAGAGATCTGAGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: PLLLESPEGYCN*CVLLLQRSEDC Trigger: ACAGTCCTCAGATCTCTGCAGCAACAGTACACAGCAATTACAGTAACCCTCGGGTGACTCCAGCAACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | TTGTTGCTGGGTTCATTTCAAAGGTCTGGGCACAGCTaGGCACTGTTGCTTGAGGCATCAAAGGAGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLLGSFQRSGHS*ALLLEASKELG Trigger: TCCAAGCTCCTTTGATGCCTCAAGCAACAGTGCCCAGCTGTGCCCAGACCTTTGAAATGAACCCAGCAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 90 bp | GATCTGAGGACTATTACAGCCATGGGCCATTGCTGCTGGGGTCATTaGAAAGATCATTTGAAAGGCACTGCTGGGCACTGCTACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DLRTITAMGHCCWGH*KDHLKGTAGHCYLR Trigger: CCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCATGGCTGTAATAGTCCTCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 72 bp | AGAAACATGAGGACTATTAAAACCACTGGACCATCTTaGTGGGGTCAGTCGAAAGCTCTGGCCACTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RNMRTIKTTGPS*WGQSKALATAG Trigger: GCCAGCAGTGGCCAGAGCTTTCGACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAGTCCTCATGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | GGTCACCTGAGGTTTAATGAAACTGCTGGATACTGGTaGTGCAGGCACCTGAGGACAATTATGACCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GHLRFNETAGYW*CRHLRTIMTTC Trigger: GCAAGTGGTCATAATTGTCCTCAGGTGCCTGCAGCACCAGTATCCAGCAGTTTCATTAAACCTCAGGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS GCA 72 bp | CCACTGTTACTGGAGTCACCCGAGGGTTACTGTAACTaGTGTGTACTGTTGCTGCAGACATCTGAGGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLLESPEGYCN*CVLLLQTSEDY Trigger: ATAGTCCTCAGATGTCTGCAGCAACAGTACACAGCAGTTACAGTAACCCTCGGGTGACTCCAGTAACAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | AGTCACCCGAGGGTTACTGTAATTGCTGTGTACTGTTaGTGCAGAGATCTGAGGACTGTTACAGCCATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHPRVTVIAVYC*CRDLRTVTAIG Trigger: GCCAATGGCTGTAACAGTCCTCAGATCTCTGCAGCAACAGTACACAGCAATTACAGTAACCCTCGGGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CTGTCACTGGAGGCACCCGAGAAGATTTGTCACAGGTaGAATATGGTACTGAAGAACCCTGAGATGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLEAPEKICHR*NMVLKNPEMLP Trigger: TGGCAACATCTCAGGGTTCTTCAGTACCATATTCCACCTGTGACAAATCTTCTCGGGTGCCTCCAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 72 bp | AGAAACATGAGGACTATTAAAACCACTGGACCATCTTaGTGGGGTCAGTTGAAAGCTCTGGCCACTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RNMRTIKTTGPS*WGQLKALATAG Trigger: GCCAGCAGTGGCCAGAGCTTTCAACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAGTCCTCATGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS TCA 72 bp | AGAAACATGAGGACTATTAAAACCACTGGACCATCTTaGTGGGGTCAGTCGATAGCTCTGGTCACTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RNMRTIKTTGPS*WGQSIALVTAG Trigger: GCCAGCAGTGACCAGAGCTATCGACTGACCCCATCAAGATGGTCCAGTGGTTTTAATAGTCCTCATGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | TATGACCACTTGCCTTTATTGCTTGAGTCATCTGAGTaGCCTGGACACTGCTGGGCTCTGTTTTTGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: YDHLPLLLESSE*PGHCWALFLET Trigger: AGTCTCCAAAAACAGAGCCCAGCAGTGTCCAGGCCACTCAGATGACTCAAGCAATAAAGGCAAGTGGTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CATCTGAGGACTATTACAACCATTGGTCATTGTTGCTaGGTTCATTTCAAAGGTCTGGGCACAGCTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLRTITTIGHCC*VHFKGLGTAGH Trigger: GTGCCCAGCTGTGCCCAGACCTTTGAAATGAACCCAGCAACAATGACCAATGGTTGTAATAGTCCTCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CCA 72 bp | CTGGGGTCATTTGAAAGATCATTTGAAAGGCACTGCTaGGCACTGCTACTTGAGGAATCAAAAGGGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGSFERSFERHC*ALLLEESKGTG Trigger: CCCAGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 72 bp | GAGTCACCCGAGGGTTACTGTAACTGCTGTGTACTGTaGCTGCAGACATCTGAGGACTATTACAACCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: ESPEGYCNCCVL*LQTSEDYYNHW Trigger: CCAATGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAGTACACAGCAGTTACAGTAACCCTCGGGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | GAGGAATCAAAAGGGACTGGGCACTTCTTGGCACTGTaGCTGGAGTTACCTGAGGGTTATTATAACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EESKGTGHFLAL*LELPEGYYNCW Trigger: CCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAAGTGCCCAGTCCCTTTTGATTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 72 bp | AAAGATCATTTGAAAGGCACTGCTGGGCACTGCTACTaGAGGAATCAAAAGGGACTGGGCACTTCTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KDHLKGTAGHCY*RNQKGLGTSWH Trigger: GTGCCAAGAAGTGCCCAGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | ATGGGCCATTGCTGCTGGGGTCATTTGAAAGATCATTaGAAAGGCACTGCTGGGCACTGCTACTTGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MGHCCWGHLKDH*KGTAGHCYLRN Trigger: ATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 72 bp | CCTGCGCATTGTTGCAGAAGACACCTGAGGGGAATTTaGGTAACTGCTGGGTATTGTTGCTGCAGAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: PAHCCRRHLRGI*VTAGYCCCRNM Trigger: CATGTTTCTGCAGCAACAATACCCAGCAGTTACCAAAATTCCCCTCAGGTGTCTTCTGCAACAATGCGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 90 bp | GAAGAGGCTAAGCTTATCCCCAGGCTCACAGTACAGTTTGGTAAATaGTCCGTAGACCACCACTTCCATCCTCCCCGTTCTATCTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: EEAKLIPRLTVQFGK*SVDHHFHPPRSIFY Trigger: ATAGAAGATAGAACGGGGAGGATGGAAGTGGTGGTCTACGGACAATTTACCAAACTGTACTGTGAGCCTGGGGATAAGCTTAGCCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
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| CDS CAA 90 bp | GTTGCGTTGGCTTTTTGTCTCAGGGAAGTTGGGATATTCATCACATaGCTGTCGTTCACCTCTGATACGCAGGAGGCTGTGTATATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VALAFCLREVGIFIT*LSFTSDTQEAVYIS Trigger: AGAGATATACACAGCCTCCTGCGTATCAGAGGTGAACGACAGCAATGTGATGAATATCCCAACTTCCCTGAGACAAAAAGCCAACGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
||
| CDS GCA 72 bp | AGGAATCAAAAGGGACTGGGCACTTCTTGGCACTGTTaGTGGAGTTACCTGAGGGTTATTATAACTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RNQKGLGTSWHC*WSYLRVIITAG Trigger: TCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAAGTGCCCAGTCCCTTTTGATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | CTGCTGGGGTCATTTGAAAGATCATTTGAAAGGCACTaGTGGGCACTGCTACTTGAGGAATCAAAAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LLGSFERSFERH*WALLLEESKGT Trigger: AGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | AATATGGTACTGAAGAACCCTGAGATGTTGCCAATATaGTGGACGATATTTCTGGAGGCTCCAGGGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NMVLKNPEMLPI*WTIFLEAPGVS Trigger: AGACACCCCTGGAGCCTCCAGAAATATCGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGTACCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | GATCTGAGGACTATTACAGCCATGGGCCATTGCTGCTaGGGTCATTTGAAAGATCATTTGAAAGGCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DLRTITAMGHCC*GHLKDHLKGTA Trigger: AGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCATGGCTGTAATAGTCCTCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | GATCTGAGGACTGTTACAGCCATTGGCCATTGCTGCTaGGGTCATTTGAAAGATCATTTGAAAGGCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DLRTVTAIGHCC*GHLKDHLKGTA Trigger: AGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAATGGCTGTAACAGTCCTCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | CTGTTGCTGCAGAGATCTGAGGACTGTTACAGCCATTaGCCATTGCTGCTGGGGTCATTTGAAAGATCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLQRSEDCYSH*PLLLGSFERSF Trigger: AAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAATGGCTGTAACAGTCCTCAGATCTCTGCAGCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | CTGCAGACATCTGAGGACTATTACAACCATTGGTCATaGTTGCTGGGTTCATTTCAAAGGTCTGGGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQTSEDYYNHWS*LLGSFQRSGHS Trigger: GCTGTGCCCAGACCTTTGAAATGAACCCAGCAACAATGACCAATGGTTGTAATAGTCCTCAGATGTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
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| CDS CAA 72 bp | CTGCAGAGATCTGAGGACTATTACAGCCATGGGCCATaGCTGCTGGGGTCATTTGAAAGATCATTTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQRSEDYYSHGP*LLGSFERSFER Trigger: CCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCATGGCTGTAATAGTCCTCAGATCTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | ATTGGCCATTGCTGCTGGGGTCATTTGAAAGATCATTaGAAAGGCACTGCTGGGCACTGCTACTTGAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: IGHCCWGHLKDH*KGTAGHCYLRN Trigger: ATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | CTGCAGAGATCTGAGGACTGTTACAGCCATTGGCCATaGCTGCTGGGGTCATTTGAAAGATCATTTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQRSEDCYSHWP*LLGSFERSFER Trigger: CCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAATGGCTGTAACAGTCCTCAGATCTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 90 bp | CTGTTGCTGGAGTTACCTGAGGGTTATTATAACTGCTGGATATTGTaGCTGCAGACATCTGAGGACTGTTACAACCACTGGTCATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLELPEGYYNCWIL*LQTSEDCYNHWSLL Trigger: CAGCAATGACCAGTGGTTGTAACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 90 bp | AGGAAAACTCCTGCGCATTGTTGCAGAAGACACCTGAGGGGAATTTaGGTAACTGCTGGGTATTGTTGCTGCAGAAACATGAGGACTATT | + |
|
Preference number: 6 (lower is better) Translates to: RKTPAHCCRRHLRGI*VTAGYCCCRNMRTI Trigger: AATAGTCCTCATGTTTCTGCAGCAACAATACCCAGCAGTTACCAAAATTCCCCTCAGGTGTCTTCTGCAACAATGCGCAGGAGTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | GCACTGTTGCTGGAGTTACCTGAGGGTTATTATAACTaGTGGATATTGTTGCTGCAGACATCTGAGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALLLELPEGYYN*WILLLQTSEDC Trigger: ACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | CATTTGAAAGATCATTTGAAAGGCACTGCTGGGCACTaGTACTTGAGGAATCAAAAGGGACTGGGCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLKDHLKGTAGH*YLRNQKGLGTS Trigger: AGAAGTGCCCAGTCCCTTTTGATTCCTCAAGTAGCAGTGCCCAGCAGTGCCTTTCAAATGATCTTTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | AGAGATCTGAGGACTATTACAGCCATGGGCCATTGCTaGTGGGGTCATTTGAAAGATCATTTGAAAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RDLRTITAMGHC*WGHLKDHLKGT Trigger: AGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCCATGGCTGTAATAGTCCTCAGATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | AGAGATCTGAGGACTGTTACAGCCATTGGCCATTGCTaGTGGGGTCATTTGAAAGATCATTTGAAAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RDLRTVTAIGHC*WGHLKDHLKGT Trigger: AGTGCCTTTCAAATGATCTTTCAAATGACCCCAGCAGCAATGGCCAATGGCTGTAACAGTCCTCAGATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | CTGTTGCTGCAGACATCTGAGGACTATTACAACCATTaGTCATTGTTGCTGGGTTCATTTCAAAGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLQTSEDYYNH*SLLLGSFQRSG Trigger: CCCAGACCTTTGAAATGAACCCAGCAACAATGACCAATGGTTGTAATAGTCCTCAGATGTCTGCAGCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | TGCTACTTGAGGAATCAAAAGGGACTGGGCACTTCTTaGCACTGTTGCTGGAGTTACCTGAGGGTTATTATA | + |
|
Preference number: 6 (lower is better) Translates to: CYLRNQKGLGTS*HCCWSYLRVII Trigger: TATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAAGTGCCCAGTCCCTTTTGATTCCTCAAGTAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | TTGTTGCAGAAGACACCTGAGGGGAATTTTGGTAACTaGTGGGTATTGTTGCTGCAGAAACATGAGGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLQKTPEGNFGN*WVLLLQKHEDY Trigger: ATAGTCCTCATGTTTCTGCAGCAACAATACCCAGCAGTTACCAAAATTCCCCTCAGGTGTCTTCTGCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CCA 72 bp | AATCAAAAGGGACTGGGCACTTCTTGGCACTGTTGCTaGAGTTACCTGAGGGTTATTATAACTGCTGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: NQKGLGTSWHCC*SYLRVIITAGY Trigger: ATATCCAGCAGTTATAATAACCCTCAGGTAACTCCAGCAACAGTGCCAAGAAGTGCCCAGTCCCTTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | GAGTTACCTGAGGGTTATTATAACTGCTGGATATTGTaGCTGCAGACATCTGAGGACTGTTACAACCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ELPEGYYNCWIL*LQTSEDCYNHW Trigger: CCAGTGGTTGTAACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | CTGGAGTTACCTGAGGGTTATTATAACTGCTGGATATaGTTGCTGCAGACATCTGAGGACTGTTACAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LELPEGYYNCWI*LLQTSEDCYNH Trigger: GTGGTTGTAACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTAACTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS TCA 72 bp | GATTTGTCACAGGTGGAATATGGTACTGAAGAACCCTaGGATGTTGCCAATATGGTGGACGATATTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLSQVEYGTEEP*DVANMVDDISG Trigger: TCCAGAAATATCGTCCACCATATTGGCAACATCTCAGGGTTCTTCAGTACCATATTCCACCTGTGACAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | TACCTGAGGGTTATTATAACTGCTGGATATTGTTGCTaGAGACATCTGAGGACTGTTACAACCACTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLRVIITAGYCC*RHLRTVTTTGH Trigger: ATGACCAGTGGTTGTAACAGTCCTCAGATGTCTGCAGCAACAATATCCAGCAGTTATAATAACCCTCAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 90 bp | CATCACTTGTTTGAAACCTTGCTGGTGACCATTTTCTTCAGAAGGTaGTTTAGGTACTTTCTTCAGTCTTGGTTTCTTGGGTGGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HHLFETLLVTIFFRR*FRYFLQSWFLGWCC Trigger: GCAACACCACCCAAGAAACCAAGACTGAAGAAAGTACCTAAACAACCTTCTGAAGAAAATGGTCACCAGCAAGGTTTCAAACAAGTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | CACATGAGGCTTACTATAACTGCTGGATATTGTTGCTaGAGAAACATGAGGACTATTAAAACCACTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HMRLTITAGYCC*RNMRTIKTTGP Trigger: TGGTCCAGTGGTTTTAATAGTCCTCATGTTTCTGCAGCAACAATATCCAGCAGTTATAGTAAGCCTCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS GCA 72 bp | CACATGAGGCTTACTATAACTGTGGGATATTGTTGCTaGAGAAACATGAGGACTATTAAAACCACTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HMRLTITVGYCC*RNMRTIKTTGP Trigger: TGGTCCAGTGGTTTTAATAGTCCTCATGTTTCTGCAGCAACAATATCCCACAGTTATAGTAAGCCTCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 90 bp | GTTCCTGCTCTTTGTGTACAAAGAGTACTAATTTTAGGTGTTGCGTaGGCTTTTTGTCTCAGGGAAGTTGGGATATTCATCACATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPALCVQRVLILGVA*AFCLREVGIFITLL Trigger: CAGCAATGTGATGAATATCCCAACTTCCCTGAGACAAAAAGCCAACGCAACACCTAAAATTAGTACTCTTTGTACACAAAGAGCAGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
||
| CDS GCA 72 bp | AGTCACATGAGGCTTACTATAACTGCTGGATATTGTTaGTGCAGAAACATGAGGACTATTAAAACCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHMRLTITAGYC*CRNMRTIKTTG Trigger: TCCAGTGGTTTTAATAGTCCTCATGTTTCTGCAGCAACAATATCCAGCAGTTATAGTAAGCCTCATGTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | TTTGAAACCTTGCTGGTGACCATTTTCTTCAGAAGGTaGTTTAGGTACTTTCTTCAGTCTTGGTTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FETLLVTIFFRR*FRYFLQSWFLG Trigger: CCCAAGAAACCAAGACTGAAGAAAGTACCTAAACAACCTTCTGAAGAAAATGGTCACCAGCAAGGTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160565.4 |
||
| CDS CAA 72 bp | CTTTGTGTACAAAGAGTACTAATTTTAGGTGTTGCGTaGGCTTTTTGTCTCAGGGAAGTTGGGATATTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LCVQRVLILGVA*AFCLREVGIFI Trigger: GATGAATATCCCAACTTCCCTGAGACAAAAAGCCAACGCAACACCTAAAATTAGTACTCTTTGTACACAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
||
| CDS CAA 90 bp | TACCTCATATACTGTAAATGTTCCATTCACAAATGTTCCTGCTCTTaGTGTACAAAGAGTACTAATTTTAGGTGTTGCGTTGGCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: YLIYCKCSIHKCSCS*CTKSTNFRCCVGFL Trigger: CAAAAAGCCAACGCAACACCTAAAATTAGTACTCTTTGTACACAAAGAGCAGGAACATTTGTGAATGGAACATTTACAGTATATGAGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169797.2 |
||
| CDS CAA 72 bp | TACTGTAAATGTTCCATTCACAAATGTTCCTGCTCTTaGTGTACAAAGAGTACTAATTTTAGGTGTTGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: YCKCSIHKCSCS*CTKSTNFRCCV Trigger: AACGCAACACCTAAAATTAGTACTCTTTGTACACAAAGAGCAGGAACATTTGTGAATGGAACATTTACAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160565.4 ENSMUST00000169797.2 |
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