Pregenerated sensors for IFI205 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054203

Ensembl transcript IDs: ENSMUST00000059226.7

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAGCCGAAGATGAGACCTGGGATATTGGTGACTGGCATGTGGCTGTaGGTCCTTCACAACAGGGAGGCTGATCTGCTTTCCCAGATGCCT	+
Preference number: 5 (lower is better) Translates to: KPKMRPGILVTGMWL*VLHNREADLLSQMP Trigger: AGGCATCTGGGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCACAGCCACATGCCAGTCACCAATATCCCAGGTCTCATCTTCGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 90 bp	AACGGGTCTGTTGCAGTGAGCACCATCACTGTCAGGGGCTCTGAGTaGAGAACAGCACCTCTGGGAATGTTCTGGTTCTGGGGTTGTGAT	+
Preference number: 5 (lower is better) Translates to: NGSVAVSTITVRGSE*RTAPLGMFWFWGCD Trigger: ATCACAACCCCAGAACCAGAACATTCCCAGAGGTGCTGTTCTCCACTCAGAGCCCCTGACAGTGATGGTGCTCACTGCAACAGACCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS TCA 90 bp	TGGGTCCTTCACAACAGGGAGGCTGATCTGCTTTCCCAGATGCCTTaGTCTTCTTCACGTCAGTCTTTTCTTCACTCATACCTTTCCTTT	+
Preference number: 5 (lower is better) Translates to: WVLHNREADLLSQMP*SSSRQSFLHSYLSF Trigger: AAAGGAAAGGTATGAGTGAAGAAAAGACTGACGTGAAGAAGATCAAGGCATCTGGGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 90 bp	TCTTCCTGGGTTGTGGAAGTCTTGCCTCTTTCAGATGCTAACATGTaGCTTGTAGTTGATGTAGGTGTTGCAGGACTTGCTTCTTGCCTA	+
Preference number: 5 (lower is better) Translates to: SSWVVEVLPLSDANM*LVVDVGVAGLASCL Trigger: TAGGCAAGAAGCAAGTCCTGCAACACCTACATCAACTACAAGCCACATGTTAGCATCTGAAAGAGGCAAGACTTCCACAACCCAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 90 bp	AGAACAGCACCTCTGGGAATGTTCTGGTTCTGGGGTTGTGATTTTTaGTTCTTAGCCGAAGGAATGTTAGATGAAGCCGAAGATGAGACC	+
Preference number: 5 (lower is better) Translates to: RTAPLGMFWFWGCDF*FLAEGMLDEAEDET Trigger: GGTCTCATCTTCGGCTTCATCTAACATTCCTTCGGCTAAGAACCAAAAATCACAACCCCAGAACCAGAACATTCCCAGAGGTGCTGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS GCA 90 bp	TCCAGAAGTACCCTTTTGAATATCACAGATCTTAGGACTGGCATTTaGATTTCTGGTAATACAGTTGGGCACTTCAATCATTTGTTTAGG	+
Preference number: 5 (lower is better) Translates to: SRSTLLNITDLRTGI*ISGNTVGHFNHLFR Trigger: CCTAAACAAATGATTGAAGTGCCCAACTGTATTACCAGAAATGCAAATGCCAGTCCTAAGATCTGTGATATTCAAAAGGGTACTTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS TCA 90 bp	AATCCAGCATCAGCTGGAAATTTCTTTACCATCATGTTAGCAATCTaGAACGTGGTATATTTCTCTTGGTTGTCTTCTTCCAGATTTAAA	+
Preference number: 5 (lower is better) Translates to: NPASAGNFFTIMLAI*NVVYFSWLSSSRFK Trigger: TTTAAATCTGGAAGAAGACAACCAAGAGAAATATACCACGTTTCAGATTGCTAACATGATGGTAAAGAAATTTCCAGCTGATGCTGGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS TCA 72 bp	TGGCATGTGGCTGTGGGTCCTTCACAACAGGGAGGCTaGTCTGCTTTCCCAGATGCCTTGATCTTCTTCACG	+
Preference number: 6 (lower is better) Translates to: WHVAVGPSQQGG*SAFPDALIFFT Trigger: CGTGAAGAAGATCAAGGCATCTGGGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCACAGCCACATGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	ATGAGACCTGGGATATTGGTGACTGGCATGTGGCTGTaGGTCCTTCACAACAGGGAGGCTGATCTGCTTTCC	+
Preference number: 6 (lower is better) Translates to: MRPGILVTGMWL*VLHNREADLLS Trigger: GGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCACAGCCACATGCCAGTCACCAATATCCCAGGTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS GCA 72 bp	TGTGGCTGTGGGTCCTTCACAACAGGGAGGCTGATCTaGTTTCCCAGATGCCTTGATCTTCTTCACGTCAGT	+
Preference number: 6 (lower is better) Translates to: CGCGSFTTGRLI*FPRCLDLLHVS Trigger: ACTGACGTGAAGAAGATCAAGGCATCTGGGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCACAGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	GCCGAAGGAATGTTAGATGAAGCCGAAGATGAGACCTaGGATATTGGTGACTGGCATGTGGCTGTGGGTCCT	+
Preference number: 6 (lower is better) Translates to: AEGMLDEAEDET*DIGDWHVAVGP Trigger: AGGACCCACAGCCACATGCCAGTCACCAATATCCCAGGTCTCATCTTCGGCTTCATCTAACATTCCTTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	TCCTTTTCTGGGCTGTGGAAGTCTCTTCCTGGGTTGTaGAAGTCTTGCCTCTTTCAGATGCTAACATGTGGC	+
Preference number: 6 (lower is better) Translates to: SFSGLWKSLPGL*KSCLFQMLTCG Trigger: GCCACATGTTAGCATCTGAAAGAGGCAAGACTTCCACAACCCAGGAAGAGACTTCCACAGCCCAGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	GGCTCTGAGTGGAGAACAGCACCTCTGGGAATGTTCTaGTTCTGGGGTTGTGATTTTTGGTTCTTAGCCGAA	+
Preference number: 6 (lower is better) Translates to: GSEWRTAPLGMF*FWGCDFWFLAE Trigger: TTCGGCTAAGAACCAAAAATCACAACCCCAGAACCAGAACATTCCCAGAGGTGCTGTTCTCCACTCAGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	GAGTGGAGAACAGCACCTCTGGGAATGTTCTGGTTCTaGGGTTGTGATTTTTGGTTCTTAGCCGAAGGAATG	+
Preference number: 6 (lower is better) Translates to: EWRTAPLGMFWF*GCDFWFLAEGM Trigger: CATTCCTTCGGCTAAGAACCAAAAATCACAACCCCAGAACCAGAACATTCCCAGAGGTGCTGTTCTCCACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CAA 90 bp	TTCCTTTTCTGGGCTGTGGAAGTCTCTTCCTGGGTTGTGGAAGTCTaGCCTCTTTCAGATGCTAACATGTGGCTTGTAGTTGATGTAGGT	+
Preference number: 6 (lower is better) Translates to: FLFWAVEVSSWVVEV*PLSDANMWLVVDVG Trigger: ACCTACATCAACTACAAGCCACATGTTAGCATCTGAAAGAGGCAAGACTTCCACAACCCAGGAAGAGACTTCCACAGCCCAGAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS CCA 72 bp	GTTGTGGAAGTCTTGCCTCTTTCAGATGCTAACATGTaGCTTGTAGTTGATGTAGGTGTTGCAGGACTTGCT	+
Preference number: 6 (lower is better) Translates to: VVEVLPLSDANM*LVVDVGVAGLA Trigger: AGCAAGTCCTGCAACACCTACATCAACTACAAGCCACATGTTAGCATCTGAAAGAGGCAAGACTTCCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059226.7
CDS GCA 72 bp	ACCCTTTTGAATATCACAGATCTTAGGACTGGCATTTaGATTTCTGGTAATACAGTTGGGCACTTCAATCAT	+
Preference number: 6 (lower is better) Translates to: TLLNITDLRTGI*ISGNTVGHFNH Trigger: ATGATTGAAGTGCCCAACTGTATTACCAGAAATGCAAATGCCAGTCCTAAGATCTGTGATATTCAAAAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059226.7