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Pregenerated sensors for IFI204 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073489

Ensembl transcript IDs: ENSMUST00000111214.4

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTGTGGAAGTCCTCGCCTGAGCTGTGGAAGTCCCCGCCTGAGCTGTaGAAGTCTCTTCCTGGGTTGCAGAAGTCTCGCCTCTTTCAGATG +
Preference number: 5 (lower is better)
Translates to: LWKSSPELWKSPPEL*KSLPGLQKSRLFQM
Trigger: CATCTGAAAGAGGCGAGACTTCTGCAACCCAGGAAGAGACTTCCACAGCTCAGGCGGGGACTTCCACAGCTCAGGCGAGGACTTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS TCA 90 bp TTCAAATGGGTCTGTTGCAGTGAGCACCATCACTGTCAGGGGCTCTaGGTGGAGAACAGCACCTCTGGGAATGTTCTGATTCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FKWVCCSEHHHCQGL*VENSTSGNVLILGL
Trigger: CAACCCCAGAATCAGAACATTCCCAGAGGTGCTGTTCTCCACTCAGAGCCCCTGACAGTGATGGTGCTCACTGCAACAGACCCATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 90 bp TGGTTCTTAGCCGAAGGAATGTTAGATGAAGCTGAAGATGAGCTGTaGAGTATTGGTGACTGGCACCTGGCTGTGGGTTCTTCACAACAG +
Preference number: 5 (lower is better)
Translates to: WFLAEGMLDEAEDEL*SIGDWHLAVGSSQQ
Trigger: CTGTTGTGAAGAACCCACAGCCAGGTGCCAGTCACCAATACTCCACAGCTCATCTTCAGCTTCATCTAACATTCCTTCGGCTAAGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 90 bp GCATGTAACTGTGCCTTACAGACCTCAGCTGCCACCCATCTTCAGTaGAAGTCAATTCAAAGCAGACAAGTCTTAGTTTACTGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: ACNCALQTSAATHLQ*KSIQSRQVLVYCLV
Trigger: AACCAGGCAGTAAACTAAGACTTGTCTGCTTTGAATTGACTTCCACTGAAGATGGGTGGCAGCTGAGGTCTGTAAGGCACAGTTACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 72 bp TCCCCGCCTGAGCTGTGGAAGTCCTCGCCTGAGCTGTaGAAGTCCCCGCCTGAGCTGTGGAAGTCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SPPELWKSSPEL*KSPPELWKSLP
Trigger: AGGAAGAGACTTCCACAGCTCAGGCGGGGACTTCCACAGCTCAGGCGAGGACTTCCACAGCTCAGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS TCA 72 bp GTCTGTTGCAGTGAGCACCATCACTGTCAGGGGCTCTaGGTGGAGAACAGCACCTCTGGGAATGTTCTGATT +
Preference number: 6 (lower is better)
Translates to: VCCSEHHHCQGL*VENSTSGNVLI
Trigger: AATCAGAACATTCCCAGAGGTGCTGTTCTCCACTCAGAGCCCCTGACAGTGATGGTGCTCACTGCAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS TCA 72 bp GGCTCTGAGTGGAGAACAGCACCTCTGGGAATGTTCTaGTTCTGGGGTTGTGATTTTTGGTTCTTAGCCGAA +
Preference number: 6 (lower is better)
Translates to: GSEWRTAPLGMF*FWGCDFWFLAE
Trigger: TTCGGCTAAGAACCAAAAATCACAACCCCAGAATCAGAACATTCCCAGAGGTGCTGTTCTCCACTCAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS TCA 72 bp GGTCAGGAGCAGCCTCTAACACAGAGGAAGTCTCATTaGTCTCCAGGATGCCTTTGCTCTCAAAGTAATTGG +
Preference number: 6 (lower is better)
Translates to: GQEQPLTQRKSH*SPGCLCSQSNW
Trigger: CCAATTACTTTGAGAGCAAAGGCATCCTGGAGATCAATGAGACTTCCTCTGTGTTAGAGGCTGCTCCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 72 bp GTTGCAGAAGTCTCGCCTCTTTCAGATGCTAACATGTaGCTTGTAGTTGATGTAGGTGTTGCAGGACCTGCT +
Preference number: 6 (lower is better)
Translates to: VAEVSPLSDANM*LVVDVGVAGPA
Trigger: AGCAGGTCCTGCAACACCTACATCAACTACAAGCCACATGTTAGCATCTGAAAGAGGCGAGACTTCTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 72 bp TGTGCCTTACAGACCTCAGCTGCCACCCATCTTCAGTaGAAGTCAATTCAAAGCAGACAAGTCTTAGTTTAC +
Preference number: 6 (lower is better)
Translates to: CALQTSAATHLQ*KSIQSRQVLVY
Trigger: GTAAACTAAGACTTGTCTGCTTTGAATTGACTTCCACTGAAGATGGGTGGCAGCTGAGGTCTGTAAGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CCA 72 bp GCATTTCTGATAATACTGTTGGGCACTTCAATCATTTaGTCAGGAGCAGCCTCTAACACAGAGGAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: AFLIILLGTSII*SGAASNTEEVS
Trigger: TGAGACTTCCTCTGTGTTAGAGGCTGCTCCTGACCAAATGATTGAAGTGCCCAACAGTATTATCAGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 72 bp ATCTTAGGGCTGGCATTTGCATTTCTGATAATACTGTaGGGCACTTCAATCATTTGGTCAGGAGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: ILGLAFAFLIIL*GTSIIWSGAAS
Trigger: AGAGGCTGCTCCTGACCAAATGATTGAAGTGCCCAACAGTATTATCAGAAATGCAAATGCCAGCCCTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 90 bp TCTTCCTTAGCAGGCTCCTTTGGTACATTTCCTCTCTTTGATATCTaGATGAAACTGTGTTCTCCACACACTAACTTTGGTTGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: SSLAGSFGTFPLFDI*MKLCSPHTNFGCLS
Trigger: TGACAGGCAACCAAAGTTAGTGTGTGGAGAACACAGTTTCATCAAGATATCAAAGAGAGGAAATGTACCAAAGGAGCCTGCTAAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 90 bp TTTCAGGTCATATGTAAATGGTTCTGTTACTTTCAGCACCATCACTaGTTTGGGACCATGATGGTGATCTTCTTCCTTAGCAGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: FQVICKWFCYFQHHH*FGTMMVIFFLSRLL
Trigger: AAGGAGCCTGCTAAGGAAGAAGATCACCATCATGGTCCCAAACAAGTGATGGTGCTGAAAGTAACAGAACCATTTACATATGACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 72 bp AAACACTCCATAGAACACTGCTCCAGAAGTACCCTTTaGAATATCACAGATCTTAGGGCTGGCATTTGCATT +
Preference number: 6 (lower is better)
Translates to: KHSIEHCSRSTL*NITDLRAGICI
Trigger: AATGCAAATGCCAGCCCTAAGATCTGTGATATTCAAAAGGGTACTTCTGGAGCAGTGTTCTATGGAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 72 bp TGTGTTCTCCACACACTAACTTTGGTTGCCTGTCAATaGTTTTCAGGTGAAAGCAGAAGAGGTGGAGTTTAT +
Preference number: 6 (lower is better)
Translates to: CVLHTLTLVACQ*FSGESRRGGVY
Trigger: ATAAACTCCACCTCTTCTGCTTTCACCTGAAAACAATTGACAGGCAACCAAAGTTAGTGTGTGGAGAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS CAA 90 bp GCTCGTTTTCTAAGAGCTGGTACTTCTTCACAAAACGCAATCAGTTaGCCCAATCCAGAATCAGCTGGAAATTTCTCTTCCATCATGTTA +
Preference number: 6 (lower is better)
Translates to: ARFLRAGTSSQNAIS*PNPESAGNFSSIML
Trigger: TAACATGATGGAAGAGAAATTTCCAGCTGATTCTGGATTGGGCAAACTGATTGCGTTTTGTGAAGAAGTACCAGCTCTTAGAAAACGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS GCA 72 bp ACCCTTTTGAATATCACAGATCTTAGGGCTGGCATTTaGATTTCTGATAATACTGTTGGGCACTTCAATCAT +
Preference number: 6 (lower is better)
Translates to: TLLNITDLRAGI*ISDNTVGHFNH
Trigger: ATGATTGAAGTGCCCAACAGTATTATCAGAAATGCAAATGCCAGCCCTAAGATCTGTGATATTCAAAAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4
CDS TCA 72 bp TTTAGGAGTTGCATTAGCTCTTTGTCTCAGTGTATTTaGGATAACCATTGTTGGATTAACGTTCACATCAGA +
Preference number: 6 (lower is better)
Translates to: FRSCISSLSQCI*DNHCWINVHIR
Trigger: TCTGATGTGAACGTTAATCCAACAATGGTTATCTCAAATACACTGAGACAAAGAGCTAATGCAACTCCTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111214.4