Pregenerated sensors for IFFO2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041025

Ensembl transcript IDs: ENSMUST00000040023.16, ENSMUST00000123827.9, ENSMUST00000174078.2

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTaGGGAGAGGAGGCTGGACCCCATCACCAAGACCACCAGGAGCGT	+
Preference number: 1 (lower is better) Translates to: GGQKSVSRSGAHTAQ*GEEAGPHHQDHQER Trigger: ACGCTCCTGGTGGTCTTGGTGATGGGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CCA 90 bp	TTCCATGGGTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTaGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGG	+
Preference number: 1 (lower is better) Translates to: FHGSVVEEGRKQRSR*ASGEGRTEVCVEEW Trigger: CCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGACCCATGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR TCA 90 bp	CCAGTGGGCCGGCTTGCAGAATGCAGGCAGGCCTTACCAGCAATCTaGCTGGGACCACCCCCAAAGCCACCTCTGAACCTCAGAGGCTAT	+
Preference number: 1 (lower is better) Translates to: PVGRLAECRQALPAI*LGPPPKPPLNLRGY Trigger: ATAGCCTCTGAGGTTCAGAGGTGGCTTTGGGGGTGGTCCCAGTCAGATTGCTGGTAAGGCCTGCCTGCATTCTGCAAGCCGGCCCACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 90 bp	CTGACTGGGACCACCCCCAAAGCCACCTCTGAACCTCAGAGGCTATaGGGGACTCATGCCAACCTTGGCCTCTCTCCCAGTTCCCAGAAG	+
Preference number: 1 (lower is better) Translates to: LTGTTPKATSEPQRL*GTHANLGLSPSSQK Trigger: CTTCTGGGAACTGGGAGAGAGGCCAAGGTTGGCATGAGTCCCTCATAGCCTCTGAGGTTCAGAGGTGGCTTTGGGGGTGGTCCCAGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 90 bp	CCCAGTGAGGGGTGGGGTCTTTCTGGGCAAGCTGTGGGCTCACAGTaGGCACAAGCAGGACCCACTGGCAACGAACTACGAAACGAACAA	+
Preference number: 1 (lower is better) Translates to: PSEGWGLSGQAVGSQ*AQAGPTGNELRNEQ Trigger: TTGTTCGTTTCGTAGTTCGTTGCCAGTGGGTCCTGCTTGTGCTCACTGTGAGCCCACAGCTTGCCCAGAAAGACCCCACCCCTCACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 90 bp	CCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCTaGGCTCTTAGTGTCCTGAGTCCCTTCTATGCCTGCTCCAGCTGC	+
Preference number: 1 (lower is better) Translates to: PQPSSTLAWSRHRQG*ALSVLSPFYACSSC Trigger: GCAGCTGGAGCAGGCATAGAAGGGACTCAGGACACTAAGAGCTCAGCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 90 bp	CTTCTGCTCTGCCCACCTGACTACCAGACTCTACCGCTTTACCGCTaGATGGAAACGGTCCCCAACCTCAGTCAAGGACCCATGAGGGCA	+
Preference number: 1 (lower is better) Translates to: LLLCPPDYQTLPLYR*METVPNLSQGPMRA Trigger: TGCCCTCATGGGTCCTTGACTGAGGTTGGGGACCGTTTCCATCCAGCGGTAAAGCGGTAGAGTCTGGTAGTCAGGTGGGCAGAGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 90 bp	CACACAGTCCACGCTGAGCCTGGAAATCTTTTCCCAGAGTGTGTATaGCTTTGCCCAGACCCGTCTCCACTCCTCCCACTAGGTCAGTCC	+
Preference number: 1 (lower is better) Translates to: HTVHAEPGNLFPECV*LCPDPSPLLPLGQS Trigger: GGACTGACCTAGTGGGAGGAGTGGAGACGGGTCTGGGCAAAGCCATACACACTCTGGGAAAAGATTTCCAGGCTCAGCGTGGACTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 90 bp	AGGAAACATGCCTACCACACCCTTGCTCCTCTCCACTCATCCTCCTaGCTCAGAGCTCCACCTCCCAGGGGAAAGCAGACTTTGAAAGTC	+
Preference number: 1 (lower is better) Translates to: RKHAYHTLAPLHSSS*LRAPPPRGKQTLKV Trigger: GACTTTCAAAGTCTGCTTTCCCCTGGGAGGTGGAGCTCTGAGGCAGGAGGATGAGTGGAGAGGAGCAAGGGTGTGGTAGGCATGTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 90 bp	TTTACCGCTGGATGGAAACGGTCCCCAACCTCAGTCAAGGACCCATaGGGGCAACCCTCCTCCTGCCCTCACAGAAACGGAAATCTTTAC	+
Preference number: 1 (lower is better) Translates to: FTAGWKRSPTSVKDP*GQPSSCPHRNGNLY Trigger: GTAAAGATTTCCGTTTCTGTGAGGGCAGGAGGAGGGTTGCCCTCATGGGTCCTTGACTGAGGTTGGGGACCGTTTCCATCCAGCGGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 90 bp	CATCCTCCTGCCTCAGAGCTCCACCTCCCAGGGGAAAGCAGACTTTaGAAGTCAGCAGGAGGGAACCCAAAGGAGTCTGCTTTTCTCATG	+
Preference number: 1 (lower is better) Translates to: HPPASELHLPGESRL*KSAGGNPKESAFLM Trigger: CATGAGAAAAGCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGTCTGCTTTCCCCTGGGAGGTGGAGCTCTGAGGCAGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 90 bp	TGGAGCTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTaGATCGACGCACAAAAGTCTGCGTTTGTGGTGTGTGTGGGGACA	+
Preference number: 1 (lower is better) Translates to: WSSKWLSLREKAQLH*IDAQKSAFVVCVGT Trigger: TGTCCCCACACACACCACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CCA 90 bp	TTCTGGGCAAGCTGTGGGCTCACAGTGAGCACAAGCAGGACCCACTaGCAACGAACTACGAAACGAACAAACCAAACACTAAGAGGAGGC	+
Preference number: 1 (lower is better) Translates to: FWASCGLTVSTSRTH*QRTTKRTNQTLRGG Trigger: GCCTCCTCTTAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGCCAGTGGGTCCTGCTTGTGCTCACTGTGAGCCCACAGCTTGCCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 90 bp	GCAGGCCTGGCCTGTTCATACTTTCTCACAGAGAAATTACAACCATaGAACCTGGCAGGTGATTGGAGAGGCGGGAATGAACATCAAGTC	+
Preference number: 1 (lower is better) Translates to: AGLACSYFLTEKLQP*NLAGDWRGGNEHQV Trigger: GACTTGATGTTCATTCCCGCCTCTCCAATCACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTATGAACAGGCCAGGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 90 bp	AAACCAGGTAGATGCTACAGTGTGTGGAAAGGGGTCGTGTCATGGTaGGGAATTCACATGTCCTCGAGAGCTTGGGAAGGAAGTCATAAG	+
Preference number: 1 (lower is better) Translates to: KPGRCYSVWKGVVSW*GIHMSSRAWEGSHK Trigger: CTTATGACTTCCTTCCCAAGCTCTCGAGGACATGTGAATTCCCCACCATGACACGACCCCTTTCCACACACTGTAGCATCTACCTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 90 bp	GGAAAGCAGACTTTGAAAGTCAGCAGGAGGGAACCCAAAGGAGTCTaGTTTTCTCATGCACACCAGACAAATGACCTATGTATACAGGTG	+
Preference number: 1 (lower is better) Translates to: GKQTLKVSRREPKGV*FSHAHQTNDLCIQV Trigger: CACCTGTATACATAGGTCATTTGTCTGGTGTGCATGAGAAAAGCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGTCTGCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 90 bp	TACTTTCTCACAGAGAAATTACAACCATGGAACCTGGCAGGTGATTaGAGAGGCGGGAATGAACATCAAGTCATCAGGAAAATAAAAGAC	+
Preference number: 1 (lower is better) Translates to: YFLTEKLQPWNLAGD*RGGNEHQVIRKIKD Trigger: GTCTTTTATTTTCCTGATGACTTGATGTTCATTCCCGCCTCTCCAATCACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR GCA 90 bp	GTCCCAGAGGGAGGACCCAGGTCTGATGAAACCCTACAGAGTCCTGGTCCTTCAAGACAGGGCAGGCGCTaGCCCAGTGAGAGGCGGCCC	+
Preference number: 2 (lower is better) Translates to: VPEGGPRSDETLQSPGPSRQGRR*PSERRP Trigger: GGGCCGCCTCTCACTGGGGCAGCGCCTGCCCTGTCT...TGAAGGACCAGGACTCTGTAGGGTTTCATCAGACCTGGGTCCTCCCTCTGGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 90 bp	AGGCCCAGAGCCCAGACCAAGCCAGGAAACATGCCTACCACACCCTaGCTCCTCTCCACTCATCCTCCTGCCTCAGAGCTCCACCTCCCA	+
Preference number: 2 (lower is better) Translates to: RPRAQTKPGNMPTTP*LLSTHPPASELHLP Trigger: TGGGAGGTGGAGCTCTGAGGCAGGAGGATGAGTGGAGAGGAGCAAGGGTGTGGTAGGCATGTTTCCTGGCTTGGTCTGGGCTCTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTGCCCACACGGCTCAGTaGGGAGAGGAGGCTGGACCC	+
Preference number: 2 (lower is better) Translates to: LRKQTTASHLGTEGGSKAAHTAQ*GEEAGP Trigger: GGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGC...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR GCA 90 bp	GTCCCAGAGGGAGGACCCAGGTCTGATGAAACCCTACAGAGTCCTGGTCCTTCACAGTCATTGCCAGCCTaGCAGCAGCCATGCCACTCC	+
Preference number: 2 (lower is better) Translates to: VPEGGPRSDETLQSPGPSQSLPA*QQPCHS Trigger: GGAGTGGCATGGCTGCTGGCAGGCTGGCAATGACTG...TGAAGGACCAGGACTCTGTAGGGTTTCATCAGACCTGGGTCCTCCCTCTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGCACTCTATCCCTGGGTaGGAAAGTATTGACGACTCC	+
Preference number: 2 (lower is better) Translates to: GAEGRGRRNNKLPPQLCAHSIPG*ESIDDS Trigger: GGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTG...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GGTCTTCCCTCCCTCCACTTCCGTCCACCACTCTATCCCTGGGTGAGAAAGTATGTGGGGAGAGGAGGCTaGACCCCATCACCAAGACCA	+
Preference number: 2 (lower is better) Translates to: GLPSLHFRPPLYPWVRKYVGRGG*TPSPRP Trigger: TGGTCTTGGTGATGGGGTCCAGCCTCCTCTCCCCAC...ATACTTTCTCACCCAGGGATAGAGTGGTGGACGGAAGTGGAGGGAGGGAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	AAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGTCGTGGGGAGAGGAGGCTaGACCCCATCACCAAGACCA	+
Preference number: 2 (lower is better) Translates to: KQTTASHLGTEGGSKAHVVGRGG*TPSPRP Trigger: TGGTCTTGGTGATGGGGTCCAGCCTCCTCTCCCCAC...GACATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACAAAAGTCTGCGTTTGTGCCCACACGGCTCAGTaGGGAGAGGAGGCTGGACCC	+
Preference number: 2 (lower is better) Translates to: LKGEGTVALHRRTKVCVCAHTAQ*GEEAGP Trigger: GGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGC...ACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATAAGCAGCGGTCCCGCTaGGCCTCCGGAGAAGGGAGG	+
Preference number: 2 (lower is better) Translates to: ALEVTQSTSLRKQTTASHKQRSR*ASGEGR Trigger: CCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT...ATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GTCCTTCATCCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCCACCGCAAGTCATCTTaGGACAGAGGGAGGGAGCAA	+
Preference number: 2 (lower is better) Translates to: VLHPQPSSTLAWSRHRQGHRKSS*DRGREQ Trigger: TTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTG...GCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CCTCGCCCAGCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCCATTCCATGGGTCGGTaGTGGAGGAAGGAAGGAAGC	+
Preference number: 2 (lower is better) Translates to: PRPALEVTQSTSLRKQTTHSMGR*WRKEGS Trigger: GCTTCCTTCCTTCCTCCACCACCGACCCATGGAATG...GGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGCTGGGCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	ACCACTCTATCCCTGGGTGAGAAAGTATTGACGACTCCTCCTCGCCCAGCTCTGCACCGCAAGTCATCTTaGGACAGAGGGAGGGAGCAA	+
Preference number: 2 (lower is better) Translates to: TTLSLGEKVLTTPPRPALHRKSS*DRGREQ Trigger: TTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTG...CAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GTCCTTCATCCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCTTTCTGGGCAAGCTGTaGGCTCACAGTGAGCACAAG	+
Preference number: 2 (lower is better) Translates to: VLHPQPSSTLAWSRHRQGFLGKL*AHSEHK Trigger: CTTGTGCTCACTGTGAGCCCACAGCTTGCCCAGAAA...GCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACAAAAGTCTGCGTTTGTGTGGGGAGAGGAGGCTaGACCCCATCACCAAGACCA	+
Preference number: 2 (lower is better) Translates to: LKGEGTVALHRRTKVCVCVGRGG*TPSPRP Trigger: TGGTCTTGGTGATGGGGTCCAGCCTCCTCTCCCCAC...ACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GCAACGAACTACGAAACGAACAAACCAAACACTAAGAGGAGGCCAGGCCCAGAGTCCATGGGTCGGTGGTaGAGGAAGGAAGGAAGCAGC	+
Preference number: 2 (lower is better) Translates to: ATNYETNKPNTKRRPGPESMGRW*RKEGSS Trigger: GCTGCTTCCTTCCTTCCTCCACCACCGACCCATGGA...CTCTGGGCCTGGCCTCCTCTTAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACACATTCCATGGGTCGGTaGTGGAGGAAGGAAGGAAGC	+
Preference number: 2 (lower is better) Translates to: LKVAQLKGEGTVALHRRTHSMGR*WRKEGS Trigger: GCTTCCTTCCTTCCTCCACCACCGACCCATGGAATG...TGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCATACCAGCAATCTGACTaGGACCACCCCCAAAGCCAC	+
Preference number: 2 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPYQQSD*DHPQSH Trigger: GTGGCTTTGGGGGTGGTCCCAGTCAGATTGCTGGTA...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CCTCCTCCTGCCCTCACAGAAACGGAAATCTTTACAGCAGCTAAGGTCCAGGCCTACAACCATGGAACCTaGCAGGTGATTGGAGAGGCG	+
Preference number: 2 (lower is better) Translates to: PPPALTETEIFTAAKVQAYNHGT*QVIGEA Trigger: CGCCTCTCCAATCACCTGCCAGGTTCCATGGTTGTA...GGCCTGGACCTTAGCTGCTGTAAAGATTTCCGTTTCTGTGAGGGCAGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 90 bp	TCATCCTCCTGCCTCAGAGCTCCACCTCCCAGGGGAAAGCAGACTTaGAAAGTCAGCAGGAGGGAACCCAAAGGAGTCTGCTTTTCTCAT	+
Preference number: 2 (lower is better) Translates to: SSSCLRAPPPRGKQT*KVSRREPKGVCFSH Trigger: ATGAGAAAAGCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGTCTGCTTTCCCCTGGGAGGTGGAGCTCTGAGGCAGGAGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR GCA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCGACGCACAAAAGTCTaGGTTTGTGGTGTGTGTGGG	+
Preference number: 2 (lower is better) Translates to: LRKQTTASHLGTEGGSKARRTKV*VCGVCG Trigger: CCCACACACACCACAAACGCAGACTTTTGTGCGTCG...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GGACATTTTGTTCCTTTGAACTCCAGAGGAACCCACTGGGTCAATAAAAACAACAAGCAGCGGTCCCGCTaGGCCTCCGGAGAAGGGAGG	+
Preference number: 2 (lower is better) Translates to: GHFVPLNSRGTHWVNKNNKQRSR*ASGEGR Trigger: CCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT...GTTGTTTTTATTGACCCAGTGGGTTCCTCTGGAGTTCAAAGGAACAAAATGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GCAACGAACTACGAAACGAACAAACCAAACACTAAGAGGAGGCCAGGCCCAGAGGGATGCTCTATCTTATaGCCCCTTACCTCAGGCCCC	+
Preference number: 2 (lower is better) Translates to: ATNYETNKPNTKRRPGPEGCSIL*PLTSGP Trigger: GGGGCCTGAGGTAAGGGGCCATAAGATAGAGCATCC...CTCTGGGCCTGGCCTCCTCTTAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTTCCACAGCAAAATGCTaGGCCACCATGACTGCCTAC	+
Preference number: 2 (lower is better) Translates to: YACSSCLTTSDIVSPYAPSTAKC*ATMTAY Trigger: GTAGGCAGTCATGGTGGCCCAGCATTTTGCTGTGGA...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGAGAACCTCAGAGGCTATaGGGGACTCATGCCAACCTT	+
Preference number: 2 (lower is better) Translates to: QRAMGSDPWGHFVPLNSREPQRL*GTHANL Trigger: AAGGTTGGCATGAGTCCCTCATAGCCTCTGAGGTTC...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGAAGGACGGTCCTCACTTaGGGCTTCTCTCCAGTCATT	+
Preference number: 2 (lower is better) Translates to: QRAMGSDPWGHFVPLNSRRTVLT*GFSPVI Trigger: AATGACTGGAGAGAAGCCTCAAGTGAGGACCGTCCT...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	CCTCGCCCAGCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCCTTTGGAGCTCAAAGTaGCTCAGCTTAAGGGAGAAG	+
Preference number: 2 (lower is better) Translates to: PRPALEVTQSTSLRKQTTLWSSK*LSLREK Trigger: CTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAG...GGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGCTGGGCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GTCCCAGAGGGAGGACCCAGGTCTGATGAAACCCTACAGAGTCCTGGTCCTTCACTAGGAAGAATTCTTTaGAGCTCAAAGTGGCTCAGC	+
Preference number: 2 (lower is better) Translates to: VPEGGPRSDETLQSPGPSLGRIL*SSKWLS Trigger: GCTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAG...TGAAGGACCAGGACTCTGTAGGGTTTCATCAGACCTGGGTCCTCCCTCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	AAATGCTGGGCCACCATGACTGCCTACCCTAGATTAAAAACCTTTTCCTTTCATGCCCCAGGGGAGCCTTaGGGAATCACTGGCTCAGCG	+
Preference number: 2 (lower is better) Translates to: KCWATMTAYPRLKTFSFHAPGEP*GITGSA Trigger: CGCTGAGCCAGTGATTCCCCAAGGCTCCCCTGGGGC...ATGAAAGGAAAAGGTTTTTAATCTAGGGTAGGCAGTCATGGTGGCCCAGCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 90 bp	CACATGTCCTCGAGAGCTTGGGAAGGAAGTCATAAGGTGAGGAGTTaGCCTGAGACTCACACACAGTCCACGCTGAGCCTGGAAATCTTT	+
Preference number: 2 (lower is better) Translates to: HMSSRAWEGSHKVRS*PETHTQSTLSLEIF Trigger: AAAGATTTCCAGGCTCAGCGTGGACTGTGTGTGAGTCTCAGGCAAACTCCTCACCTTATGACTTCCTTCCCAAGCTCTCGAGGACATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 90 bp	ATTCTTTGGAGCTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTaGCACTGCATCGACGCACAAAAGTCTGCGTTTGTGGTGTGTGTG	+
Preference number: 2 (lower is better) Translates to: ILWSSKWLSLREKAQ*HCIDAQKSAFVVCV Trigger: CACACACACCACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GCAACGAACTACGAAACGAACAAACCAAACACTAAGAGGAGGCCAGGCCCAGAGCAGCGTCCAGACAGATaGGTATGGAAAGCATGTATG	+
Preference number: 2 (lower is better) Translates to: ATNYETNKPNTKRRPGPEQRPDR*VWKACM Trigger: CATACATGCTTTCCATACCCATCTGTCTGGACGCTG...CTCTGGGCCTGGCCTCCTCTTAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGAATCAGAGGAGCAGGTaGGAGGGAGAAAACCAAAAG	+
Preference number: 2 (lower is better) Translates to: GGNTVYFLEKADHRKSSWNQRSR*EGENQK Trigger: CTTTTGGTTTTCTCCCTCCCACCTGCTCCTCTGATT...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	CTGGCCTGTTCATACTTTCTCACAGAGAAATTACAACCATGGAACCTGGCAGGTCACAGTCTACTTCCTTaGGAAAGCAGACCACCGCAA	+
Preference number: 2 (lower is better) Translates to: LACSYFLTEKLQPWNLAGHSLLP*ESRPPQ Trigger: TTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTG...ACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTATGAACAGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	CTGGCCTGTTCATACTTTCTCACAGAGAAATTACAACCATGGAACCTGGCAGGTCACTCTATCCCTGGGTaGGAAAGTATTGACGACTCC	+
Preference number: 2 (lower is better) Translates to: LACSYFLTEKLQPWNLAGHSIPG*ESIDDS Trigger: GGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTG...ACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTATGAACAGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGCTAGGAAGAATTCTTTaGAGCTCAAAGTGGCTCAGC	+
Preference number: 2 (lower is better) Translates to: GGNTVYFLEKADHRKSSWLGRIL*SSKWLS Trigger: GCTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAG...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CCA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTTCCAGAGGAACCCACTaGGTCAATAAAAACAACATA	+
Preference number: 2 (lower is better) Translates to: YACSSCLTTSDIVSPYAPSRGTH*VNKNNI Trigger: TATGTTGTTTTTATTGACCCAGTGGGTTCCTCTGGA...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR GCA 90 bp	GGACATTTTGTTCCTTTGAACTCCAGAGGAACCCACTGGGTCAATAAAAACAACGGGAGAAGGCACAGTTaGACTGCATCGACGCACAAA	+
Preference number: 2 (lower is better) Translates to: GHFVPLNSRGTHWVNKNNGRRHS*TASTHK Trigger: TTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCC...GTTGTTTTTATTGACCCAGTGGGTTCCTCTGGAGTTCAAAGGAACAAAATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR TCA 90 bp	GGACATTTTGTTCCTTTGAACTCCAGAGGAACCCACTGGGTCAATAAAAACAACGCCTGCCTTCCCCAATaGTATAAGGCAAGCTGCTTT	+
Preference number: 2 (lower is better) Translates to: GHFVPLNSRGTHWVNKNNACLPQ*YKASCF Trigger: AAAGCAGCTTGCCTTATATCATTGGGGAAGGCAGGC...GTTGTTTTTATTGACCCAGTGGGTTCCTCTGGAGTTCAAAGGAACAAAATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	TCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTaGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGG	+
Preference number: 3 (lower is better) Translates to: SGEGRTEVCVEE*SPHGSVGRGGW Trigger: CCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CCA 72 bp	TCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTaGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTC	+
Preference number: 3 (lower is better) Translates to: SVVEEGRKQRSR*ASGEGRTEVCV Trigger: GACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR TCA 72 bp	CGGCTTGCAGAATGCAGGCAGGCCTTACCAGCAATCTaGCTGGGACCACCCCCAAAGCCACCTCTGAACCTC	+
Preference number: 3 (lower is better) Translates to: RLAECRQALPAI*LGPPPKPPLNL Trigger: GAGGTTCAGAGGTGGCTTTGGGGGTGGTCCCAGTCAGATTGCTGGTAAGGCCTGCCTGCATTCTGCAAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	GGATGGAAACGGTCCCCAACCTCAGTCAAGGACCCATaGGGGCAACCCTCCTCCTGCCCTCACAGAAACGGA	+
Preference number: 3 (lower is better) Translates to: GWKRSPTSVKDP*GQPSSCPHRNG Trigger: TCCGTTTCTGTGAGGGCAGGAGGAGGGTTGCCCTCATGGGTCCTTGACTGAGGTTGGGGACCGTTTCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	CCCAGACCAAGCCAGGAAACATGCCTACCACACCCTTaGTCCTCTCCACTCATCCTCCTGCCTCAGAGCTCC	+
Preference number: 3 (lower is better) Translates to: PRPSQETCLPHP*SSPLILLPQSS Trigger: GGAGCTCTGAGGCAGGAGGATGAGTGGAGAGGAGCAAGGGTGTGGTAGGCATGTTTCCTGGCTTGGTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	ACCACCCCCAAAGCCACCTCTGAACCTCAGAGGCTATaGGGGACTCATGCCAACCTTGGCCTCTCTCCCAGT	+
Preference number: 3 (lower is better) Translates to: TTPKATSEPQRL*GTHANLGLSPS Trigger: ACTGGGAGAGAGGCCAAGGTTGGCATGAGTCCCTCATAGCCTCTGAGGTTCAGAGGTGGCTTTGGGGGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCACCACCGCAAGTCATCTaGGGACAGAGGGAGGGAGCA	+
Preference number: 3 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPPPQVI*GQREGA Trigger: TGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGG...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	GCCTCAGAGCTCCACCTCCCAGGGGAAAGCAGACTTTaGAAGTCAGCAGGAGGGAACCCAAAGGAGTCTGCT	+
Preference number: 3 (lower is better) Translates to: ASELHLPGESRL*KSAGGNPKESA Trigger: AGCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGTCTGCTTTCCCCTGGGAGGTGGAGCTCTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	AGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCTaGGCTCTTAGTGTCCTGAGTCCCTTCTATGCCTGC	+
Preference number: 3 (lower is better) Translates to: SSTLAWSRHRQG*ALSVLSPFYAC Trigger: GCAGGCATAGAAGGGACTCAGGACACTAAGAGCTCAGCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	GGTCCCCAAGAAAACCATCAGTCCAGTGGGCCGGCTTaGAGAATGCAGGCAGGCCTTACCAGCAATCTGACT	+
Preference number: 3 (lower is better) Translates to: GPQENHQSSGPA*RMQAGLTSNLT Trigger: AGTCAGATTGCTGGTAAGGCCTGCCTGCATTCTGCAAGCCGGCCCACTGGACTGATGGTTTTCTTGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	CCACCCAGGCCTCAGAGGGCCATGGGTTCTGATCCCTaGGGACATTTTGTTCCTTTGAACTCCAGAGGAACC	+
Preference number: 3 (lower is better) Translates to: PPRPQRAMGSDP*GHFVPLNSRGT Trigger: GGTTCCTCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTGAGGCCTGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	AAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGTCAGGGAGAAGGCACAGTaGCACTGCATCGACGCACAA	+
Preference number: 3 (lower is better) Translates to: KQTTASHLGTEGGSKAHVREKAQ*HCIDAQ Trigger: TTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCT...GACATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGAGCTTCTCTCCAGTCATaGCCAGCCTGCCAGCAGCCA	+
Preference number: 3 (lower is better) Translates to: QRAMGSDPWGHFVPLNSRASLQS*PACQQP Trigger: TGGCTGCTGGCAGGCTGGCAATGACTGGAGAGAAGC...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	CCCTTTACCACCCAGGCCTCAGAGGGCCATGGGTTCTaGTCCCTGGGGACATTTTGTTCCTTTGAACTCCAG	+
Preference number: 3 (lower is better) Translates to: PFTTQASEGHGF*SLGTFCSFELQ Trigger: CTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTGAGGCCTGGGTGGTAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	AAGAACGATCAAGGGCTGGCTTCTGCTCTGCCCACCTaGCTACCAGACTCTACCGCTTTACCGCTGGATGGA	+
Preference number: 3 (lower is better) Translates to: KNDQGLASALPT*LPDSTALPLDG Trigger: TCCATCCAGCGGTAAAGCGGTAGAGTCTGGTAGTCAGGTGGGCAGAGCAGAAGCCAGCCCTTGATCGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	GAGTCCTGGTCCTTCATCCACAACCAAGCTCGACCTTaGCCTGGAGTAGACACAGACAGGGCTGAGCTCTTA	+
Preference number: 3 (lower is better) Translates to: ESWSFIHNQARP*PGVDTDRAELL Trigger: TAAGAGCTCAGCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGACCAGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTAGGGAGAAGGCACAGTaGCACTGCATCGACGCACAA	+
Preference number: 3 (lower is better) Translates to: YACSSCLTTSDIVSPYAPREKAQ*HCIDAQ Trigger: TTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCT...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	GTGTGTGTGTGTGTGTTTCACGACCAACCAGGAACCTaGAAGGATGCTGTCTCCCTGCTGTGCCTGTGTATG	+
Preference number: 3 (lower is better) Translates to: VCVCVFHDQPGT*KDAVSLLCLCM Trigger: CATACACAGGCACAGCAGGGAGACAGCATCCTTTCAGGTTCCTGGTTGGTCGTGAAACACACACACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	ACATGTCCTCGAGAGCTTGGGAAGGAAGTCATAAGGTaGGGAGTTTGCCTGAGACTCACACACAGTCCACGC	+
Preference number: 3 (lower is better) Translates to: TCPRELGKEVIR*GVCLRLTHSPR Trigger: GCGTGGACTGTGTGTGAGTCTCAGGCAAACTCCTCACCTTATGACTTCCTTCCCAAGCTCTCGAGGACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	AGCCTTGGGGAATCACTGGCTCAGCGTCCAGACAGATaGGTATGGAAAGCATGTATGAATGAGGACGGTCCT	+
Preference number: 3 (lower is better) Translates to: SLGESLAQRPDR*VWKACMNEDGP Trigger: AGGACCGTCCTCATTCATACATGCTTTCCATACCCATCTGTCTGGACGCTGAGCCAGTGATTCCCCAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	AACAATTGTCCCTCCAAGTACCTGCACAGGGACCAATaGGAAACCCCTCCCCACATCATGGAAGACACACGT	+
Preference number: 3 (lower is better) Translates to: NNCPSKYLHRDQ*ETPPHIMEDTR Trigger: ACGTGTGTCTTCCATGATGTGGGGAGGGGTTTCCCATTGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	GGTAGATGCTACAGTGTGTGGAAAGGGGTCGTGTCATaGTGGGGAATTCACATGTCCTCGAGAGCTTGGGAA	+
Preference number: 3 (lower is better) Translates to: GRCYSVWKGVVS*WGIHMSSRAWE Trigger: TTCCCAAGCTCTCGAGGACATGTGAATTCCCCACCATGACACGACCCCTTTCCACACACTGTAGCATCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	ACCACTCTATCCCTGGGTGAGAAAGTATTGACGACTCCTCCTCGCCCAGCTCTGGCTAGGAAGAATTCTTaGGAGCTCAAAGTGGCTCAG	+
Preference number: 3 (lower is better) Translates to: TTLSLGEKVLTTPPRPALARKNS*ELKVAQ Trigger: CTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAGC...CAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCAACACAGTCTACTTCCTaGAGAAAGCAGACCACCGCA	+
Preference number: 3 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPTQSTS*RKQTTA Trigger: TGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGT...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTGCTAGGAAGAATTCTTaGGAGCTCAAAGTGGCTCAG	+
Preference number: 3 (lower is better) Translates to: YACSSCLTTSDIVSPYAPARKNS*ELKVAQ Trigger: CTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAGC...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	AAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTaGATCGACGCACAAAAGTCTGCGTTTGTGGTGTGT	+
Preference number: 3 (lower is better) Translates to: KWLSLREKAQLH*IDAQKSAFVVC Trigger: ACACACCACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CCA 72 bp	TACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTaGGACAGAGGGAGGGAGCAAAGCTCATGTCCAATC	+
Preference number: 3 (lower is better) Translates to: YFLEKADHRKSS*DRGREQSSCPI Trigger: GATTGGACATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CCA 72 bp	AGCTGTGGGCTCACAGTGAGCACAAGCAGGACCCACTaGCAACGAACTACGAAACGAACAAACCAAACACTA	+
Preference number: 3 (lower is better) Translates to: SCGLTVSTSRTH*QRTTKRTNQTL Trigger: TAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGCCAGTGGGTCCTGCTTGTGCTCACTGTGAGCCCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	AAAAGTCAAGAGAACATATGTACATGTTTACACGGGTaGACAAGTTCGTCCAGACAGGGCAGGCGCTGCCCC	+
Preference number: 3 (lower is better) Translates to: KSQENICTCLHG*TSSSRQGRRCP Trigger: GGGGCAGCGCCTGCCCTGTCTGGACGAACTTGTCCACCCGTGTAAACATGTACATATGTTCTCTTGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR-3UTR CAA 90 bp	AAATGCTGGGCCACCATGACTGCCTACCCTAGATTAAAAACCTTTTCCTTTCATGCTTCTCTCCAGTCATaGCCAGCCTGCCAGCAGCCA	+
Preference number: 3 (lower is better) Translates to: KCWATMTAYPRLKTFSFHASLQS*PACQQP Trigger: TGGCTGCTGGCAGGCTGGCAATGACTGGAGAGAAGC...ATGAAAGGAAAAGGTTTTTAATCTAGGGTAGGCAGTCATGGTGGCCCAGCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	AACAGAGTCCAAAGTGTTCATGCCTTCCAGACACACTaGCAACGGGAAGACAAAACCTCTTCCCCATCTTTC	+
Preference number: 3 (lower is better) Translates to: NRVQSVHAFQTH*QREDKTSSPSF Trigger: GAAAGATGGGGAAGAGGTTTTGTCTTCCCGTTGGCAGTGTGTCTGGAAGGCATGAACACTTTGGACTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR TCA 72 bp	CATCCCCTCTCCTCCCACCCTAAAGTCAAAGTGGTTTaGCTCTTCATAGGACATCTGAGTTCTACCCCTAAA	+
Preference number: 3 (lower is better) Translates to: HPLSSHPKVKVV*LFIGHLSSTPK Trigger: TTTAGGGGTAGAACTCAGATGTCCTATGAAGAGTCAAACCACTTTGACTTTAGGGTGGGAGGAGAGGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	GCCTGTTCATACTTTCTCACAGAGAAATTACAACCATaGAACCTGGCAGGTGATTGGAGAGGCGGGAATGAA	+
Preference number: 3 (lower is better) Translates to: ACSYFLTEKLQP*NLAGDWRGGNE Trigger: TTCATTCCCGCCTCTCCAATCACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTATGAACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	ACTTTGAAAGTCAGCAGGAGGGAACCCAAAGGAGTCTaGTTTTCTCATGCACACCAGACAAATGACCTATGT	+
Preference number: 3 (lower is better) Translates to: TLKVSRREPKGV*FSHAHQTNDLC Trigger: ACATAGGTCATTTGTCTGGTGTGCATGAGAAAAGCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR GCA 72 bp	GTCAATGAACATGGCGGTATCTTATCCACAGCAAAATaGTGGGCCACCATGACTGCCTACCCTAGATTAAAA	+
Preference number: 3 (lower is better) Translates to: VNEHGGILSTAK*WATMTAYPRLK Trigger: TTTTAATCTAGGGTAGGCAGTCATGGTGGCCCAGCATTTTGCTGTGGATAAGATACCGCCATGTTCATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CCA 72 bp	CATACTTTCTCACAGAGAAATTACAACCATGGAACCTaGCAGGTGATTGGAGAGGCGGGAATGAACATCAAG	+
Preference number: 3 (lower is better) Translates to: HTFSQRNYNHGT*QVIGEAGMNIK Trigger: CTTGATGTTCATTCCCGCCTCTCCAATCACCTGCCAGGTTCCATGGTTGTAATTTCTCTGTGAGAAAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCCGCCACCGCCTCCCGTaGGCCGCACCTGCGTGTAGC	+
Preference number: 4 (lower is better) Translates to: ASGEGRTEVCVEEWSPHGRHRLP*AAPACS Trigger: GCTACACGCAGGTGCGGCGCACGGGAGGCGGTGGCG...GCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGGAGCTGGGGGACGGTaGATTCCTGTCTGCAGAGCC	+
Preference number: 4 (lower is better) Translates to: GGGGRKEAAVPLGLRRREGAGGR*IPVCRA Trigger: GGCTCTGCAGACAGGAATTCACCGTCCCCCAGCTCC...CTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGTACTTCCTGAGTCACTaGTGGCCACGGAGCTGGGGG	+
Preference number: 4 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRYFLSH*WPRSWG Trigger: CCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAAGTA...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGTGCTGGCCACGGAGCTaGGGGACGGTGAATTCCTGT	+
Preference number: 4 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRCWPRS*GTVNSC Trigger: ACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCA...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTTGCGCCGCCTCCTaGAGCGTGTCCACCATGGTC	+
Preference number: 4 (lower is better) Translates to: RKEGSSGPAGPPEKGGQKSCAAS*SVSTMV Trigger: GACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGA...CTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCATAGCCTCGGCTTCTTaGGCCGCCTCCTGCAGCGTG	+
Preference number: 4 (lower is better) Translates to: ASGEGRTEVCVEEWSPHGIASAS*AASCSV Trigger: CACGCTGCAGGAGGCGGCGCAAGAAGCCGAGGCTAT...GCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGCCGGTCTGCACGGCCTaGTCGCGGGAGAAGGTCTTG	+
Preference number: 4 (lower is better) Translates to: GAEGRGRRNNKLPPQLCAPVCTA*SREKVL Trigger: CAAGACCTTCTCCCGCGAGCAGGCCGTGCAGACCGG...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTTCCTGAGTCACTGCTaGCCACGGAGCTGGGGGACG	+
Preference number: 4 (lower is better) Translates to: RKEAAVPLGLRRREDRSLFLSHC*PRSWGT Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAA...CAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGCTTGGACACGTCTTCTaGGTTCCTCTGCTGTGCGAC	+
Preference number: 4 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRLGHVF*VPLLCD Trigger: GTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAG...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGTTCGTCTGTACTTCCTaGGTCACTGCTGGCCACGGA	+
Preference number: 4 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRFVCTS*VTAGHG Trigger: TCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAA...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGTGTCCACCATGGTCTaGAGGTTCATGCGTTTGGCC	+
Preference number: 4 (lower is better) Translates to: GGGGRKEAAVPLGLRRREVSTMV*RFMRLA Trigger: GGCCAAACGCATGAACCTTCAGACCATGGTGGACAC...CTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTACTTCCTGAGTCACTaGTGGCCACGGAGCTGGGGG	+
Preference number: 4 (lower is better) Translates to: ASGEGRTEVCVEEWSPHGYFLSH*WPRSWG Trigger: CCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAAGTA...GCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCAAGCTCGGGCCCGGTCTaGACGGCCTGCTCGCGGGAG	+
Preference number: 4 (lower is better) Translates to: EKADHRKSSWDRGREQSSSSGPV*TACSRE Trigger: CTCCCGCGAGCAGGCCGTGCAGACCGGGCCCGAGCT...TGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGCCACCAGCTCGGCCTTaGGCCGCTCAATCTTCTCGT	+
Preference number: 4 (lower is better) Translates to: GAEGRGRRNNKLPPQLCAPPARP*AAQSSR Trigger: ACGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGG...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGCGCTCGCTCTGCTGCTaGTCCAGCTGTTTCTCCAGG	+
Preference number: 4 (lower is better) Translates to: GAEGRGRRNNKLPPQLCARSLCC*SSCFSR Trigger: CCTGGAGAAACAGCTGGAGCAGCAGCAGAGCGAGCG...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGTCGTTCATCTCCTCCTaGATAGCCTCGGCTTCTTGC	+
Preference number: 4 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRSFISS*IASASC Trigger: GCAAGAAGCCGAGGCTATCCAGGAGGAGATGAACGA...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGAAGGTCTCCCGCAGCTaGTTAAACATGCGCTTCATC	+
Preference number: 4 (lower is better) Translates to: GGGGRKEAAVPLGLRRREKVSRS*LNMRFI Trigger: GATGAAGCGCATGTTTAACCAGCTGCGGGAGACCTT...CTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCAT	+
Preference number: 4 (lower is better) Translates to: GGGGRKEAAVPLGLRRREPCLSS*RRIRSH Trigger: ATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGG...CTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGCCCAAGTTTTCTTCTTaGTCACCCTGCAGGTCAATG	+
Preference number: 4 (lower is better) Translates to: GGGGRKEAAVPLGLRRREPKFSS*SPCRSM Trigger: CATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGG...CTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGGCCTATGGTCTCCTaGTACTCCTTGTCTCTCGTC	+
Preference number: 4 (lower is better) Translates to: RKEAAVPLGLRRREDRSLWPMVS*YSLSLV Trigger: GACGAGAGACAAGGAGTACCAGGAGACCATAGGCCA...CAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGGACCCCATCGCTCCAGGTCTTCCTaGATTTCGTCTGTACTTCCT	+
Preference number: 4 (lower is better) Translates to: VSRSGAHTAQWGEEAGPHRSRSS*ISSVLP Trigger: AGGAAGTACAGACGAAATCCAGGAAGACCTGGAGCG...ATGGGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGACCGT	+
Preference number: 4 (lower is better) Translates to: ESRPPQVILGQREGAKLMACSSR*SRAGDR Trigger: ACGGTCGCCTGCCCGGGACCATCTGGAGCTACACGC...CATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
3UTR CAA 72 bp	GCCCAGACCAAGCCAGGAAACATGCCTACCACACCCTaGCTCCTCTCCACTCATCCTCCTGCCTCAGAGCTC	+
Preference number: 4 (lower is better) Translates to: AQTKPGNMPTTP*LLSTHPPASEL Trigger: GAGCTCTGAGGCAGGAGGATGAGTGGAGAGGAGCAAGGGTGTGGTAGGCATGTTTCCTGGCTTGGTCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	CCTCCTCCTGCCCTCACAGAAACGGAAATCTTTACAGCAGCTAAGGTCCAGGCCTCTTGCGCCGCCTCCTaGAGCGTGTCCACCATGGTC	+
Preference number: 4 (lower is better) Translates to: PPPALTETEIFTAAKVQASCAAS*SVSTMV Trigger: GACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGA...GGCCTGGACCTTAGCTGCTGTAAAGATTTCCGTTTCTGTGAGGGCAGGAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGTCTTCTGAGTTCCTCTaGTGTGCGACATCACACAGC	+
Preference number: 4 (lower is better) Translates to: GPPEKGGQKSVSRSGAHTSSEFL*CATSHS Trigger: GCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGA...CGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGGACCCCATCCAGGCCTCGCTTCATaGTGCACATTTCCATATACT	+
Preference number: 4 (lower is better) Translates to: VSRSGAHTAQWGEEAGPHPGLAS*CTFPYT Trigger: AGTATATGGAAATGTGCAGCATGAAGCGAGGCCTGG...ATGGGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	CCTCCTCCTGCCCTCACAGAAACGGAAATCTTTACAGCAGCTAAGGTCCAGGCCCGCCGCTCCAGCTCGTaGACCTTGGCCAAGAAGCAG	+
Preference number: 4 (lower is better) Translates to: PPPALTETEIFTAAKVQARRSSS*TLAKKQ Trigger: CTGCTTCTTGGCCAAGGTGCACGAGCTGGAGCGGCG...GGCCTGGACCTTAGCTGCTGTAAAGATTTCCGTTTCTGTGAGGGCAGGAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGGCTCAATCTGGCCTATaGTCTCCTGGTACTCCTTGT	+
Preference number: 4 (lower is better) Translates to: RKEGSSGPAGPPEKGGQKAQSGL*SPGTPC Trigger: ACAAGGAGTACCAGGAGACCATAGGCCAGATTGAGC...CTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	ACCACTCTATCCCTGGGTGAGAAAGTATTGACGACTCCTCCTCGCCCAGCTCTGTTCCTGAGTCACTGCTaGCCACGGAGCTGGGGGACG	+
Preference number: 4 (lower is better) Translates to: TTLSLGEKVLTTPPRPALFLSHC*PRSWGT Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAA...CAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAAGGTTCATGCGTTTaGCCAGTTCCTCCTCCCACC	+
Preference number: 4 (lower is better) Translates to: KGGQKSVSRSGAHTAQWGEGSCV*PVPPPT Trigger: GGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTC...TCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTGGAGCTGGGGGACGGTaGATTCCTGTCTGCAGAGCC	+
Preference number: 4 (lower is better) Translates to: LRKQTTASHLGTEGGSKAGAGGR*IPVCRA Trigger: GGCTCTGCAGACAGGAATTCACCGTCCCCCAGCTCC...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	TCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCCAAGTTTTCTTCTTaGTCACCCTGCAGGTCAATG	+
Preference number: 4 (lower is better) Translates to: SRWASGEGRTEVCVEEWSPKFSS*SPCRSM Trigger: CATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGG...GCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGTACTTCCTGAGTCACTaGTGGCCACGGAGCTGGGGG	+
Preference number: 4 (lower is better) Translates to: ESRPPQVILGQREGAKLMYFLSH*WPRSWG Trigger: CCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAAGTA...CATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	TGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCCATGGGACACGCCGGGGCCCTaGACAGTCTCCACGCCACCG	+
Preference number: 4 (lower is better) Translates to: CVCGVCGDNRKIDSTIPWDTPGP*TVSTPP Trigger: CGGTGGCGTGGAGACTGTGCAGGGCCCCGGCGTGTC...CCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGATCGTTCATCTCCTCCTaGATAGCCTCGGCTTCTTGC	+
Preference number: 4 (lower is better) Translates to: KGGQKSVSRSGAHTAQWGSFISS*IASASC Trigger: GCAAGAAGCCGAGGCTATCCAGGAGGAGATGAACGA...TCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGTTCTTAGGGACCACCTaGAAGATCTTGGACACGTCT	+
Preference number: 4 (lower is better) Translates to: KQRSRWASGEGRTEVCVEFLGTT*KILDTS Trigger: AGACGTGTCCAAGATCTTCCAGGTGGTCCCTAAGAA...CTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGGCTCAATCTGGCCTATaGTCTCCTGGTACTCCTTGT	+
Preference number: 4 (lower is better) Translates to: PEKGGQKSVSRSGAHTAQAQSGL*SPGTPC Trigger: ACAAGGAGTACCAGGAGACCATAGGCCAGATTGAGC...CTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CCTCGCCCAGCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCTGCTGGCCACGGAGCTaGGGGACGGTGAATTCCTGT	+
Preference number: 4 (lower is better) Translates to: PRPALEVTQSTSLRKQTTCWPRS*GTVNSC Trigger: ACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCA...GGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGCTGGGCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGGGACAATAGAAAAATCGACAGCACCATTCCATGGGTCGGTGGTGGAGGAAGGTTCCTGAGTCACTGCTaGCCACGGAGCTGGGGGACG	+
Preference number: 4 (lower is better) Translates to: GDNRKIDSTIPWVGGGGRFLSHC*PRSWGT Trigger: CGTCCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAA...CCTTCCTCCACCACCGACCCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	CTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACACCACCAGCTCGGCCTTaGGCCGCTCAATCTTCTCGT	+
Preference number: 4 (lower is better) Translates to: LKVAQLKGEGTVALHRRTPPARP*AAQSSR Trigger: ACGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGG...TGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGGACCAGGCCTCGCTTCATaGTGCACATTTCCATATACT	+
Preference number: 4 (lower is better) Translates to: KSVSRSGAHTAQWGEEAGPGLAS*CTFPYT Trigger: AGTATATGGAAATGTGCAGCATGAAGCGAGGCCTGG...TCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGACGCTCCAGGTCTTCCTaGATTTCGTCTGTACTTCCT	+
Preference number: 4 (lower is better) Translates to: KGGQKSVSRSGAHTAQWGRSRSS*ISSVLP Trigger: AGGAAGTACAGACGAAATCCAGGAAGACCTGGAGCG...TCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CAA 72 bp	TGCCTCAGAGCTCCACCTCCCAGGGGAAAGCAGACTTaGAAAGTCAGCAGGAGGGAACCCAAAGGAGTCTGC	+
Preference number: 4 (lower is better) Translates to: CLRAPPPRGKQT*KVSRREPKGVC Trigger: GCAGACTCCTTTGGGTTCCCTCCTGCTGACTTTCAAAGTCTGCTTTCCCCTGGGAGGTGGAGCTCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGGGAGCTGGGGGACGGTaGATTCCTGTCTGCAGAGCC	+
Preference number: 4 (lower is better) Translates to: GGNTVYFLEKADHRKSSWGAGGR*IPVCRA Trigger: GGCTCTGCAGACAGGAATTCACCGTCCCCCAGCTCC...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATATAGCCTCGGCTTCTTaGGCCGCCTCCTGCAGCGTG	+
Preference number: 4 (lower is better) Translates to: ALEVTQSTSLRKQTTASHIASAS*AASCSV Trigger: CACGCTGCAGGAGGCGGCGCAAGAAGCCGAGGCTAT...ATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGTCTTCCCTCCCTCCACTTCCGTCCACCACTCTATCCCTGGGTGAGAAAGTATTTCACCTCCCCGTCCTaGTCCGAGATGTCTTCATCC	+
Preference number: 4 (lower is better) Translates to: GLPSLHFRPPLYPWVRKYFTSPS*SEMSSS Trigger: GGATGAAGACATCTCGGAGCAGGACGGGGAGGTGAA...ATACTTTCTCACCCAGGGATAGAGTGGTGGACGGAAGTGGAGGGAGGGAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGATCGCGCTCGCTCTGCTaGTGCTCCAGCTGTTTCTCC	+
Preference number: 4 (lower is better) Translates to: QRAMGSDPWGHFVPLNSRSRSLC*CSSCFS Trigger: GGAGAAACAGCTGGAGCAGCAGCAGAGCGAGCGCGA...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGCTGCAGGTCAATGGTTaGGTTACAGTTGGTAAAATC	+
Preference number: 4 (lower is better) Translates to: RKEAAVPLGLRRREDRSLLQVNG*VTVGKI Trigger: GATTTTACCAACTGTAACCCAACCATTGACCTGCAG...CAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	AGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTT	+
Preference number: 4 (lower is better) Translates to: RKEGSSGPAGPPEKGGQKKDSVS*IKLPKF Trigger: AAACTTGGGCAACTTGATCCATGAGACCGAATCCTT...CTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTT	+
Preference number: 4 (lower is better) Translates to: GPPEKGGQKSVSRSGAHTKDSVS*IKLPKF Trigger: AAACTTGGGCAACTTGATCCATGAGACCGAATCCTT...CGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CAA 72 bp	CTTCCGTCCACCACTCTATCCCTGGGTGAGAAAGTATaGACGACTCCTCCTCGCCCAGCTCTGGAGGTAACA	+
Preference number: 4 (lower is better) Translates to: LPSTTLSLGEKV*TTPPRPALEVT Trigger: TGTTACCTCCAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGTGGACGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGCCACCAGCTCGGCCTTaGGCCGCTCAATCTTCTCGT	+
Preference number: 4 (lower is better) Translates to: GGNTVYFLEKADHRKSSWPPARP*AAQSSR Trigger: ACGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGG...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTCTTGGACACGTCTTCTaGGTTCCTCTGCTGTGCGAC	+
Preference number: 4 (lower is better) Translates to: YACSSCLTTSDIVSPYAPLGHVF*VPLLCD Trigger: GTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAG...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	TGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCCATGGTCTTGCGCCGCCTCCTaGAGCGTGTCCACCATGGTC	+
Preference number: 4 (lower is better) Translates to: CVCGVCGDNRKIDSTIPWSCAAS*SVSTMV Trigger: GACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGA...CCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCCCAGAGGGAGGACCCAGGTCTGATGAAACCCTACAGAGTCCTGGTCCTTCAGCTCAATCTGGCCTATaGTCTCCTGGTACTCCTTGT	+
Preference number: 4 (lower is better) Translates to: VPEGGPRSDETLQSPGPSAQSGL*SPGTPC Trigger: ACAAGGAGTACCAGGAGACCATAGGCCAGATTGAGC...TGAAGGACCAGGACTCTGTAGGGTTTCATCAGACCTGGGTCCTCCCTCTGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 72 bp	CCTCGCCCAGCTCTGGAGGTAACACAGTCTACTTCCTaGAGAAAGCAGACCACCGCAAGTCATCTTGGGACA	+
Preference number: 4 (lower is better) Translates to: PRPALEVTQSTS*RKQTTASHLGT Trigger: TGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGCTGGGCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
3UTR CAA 72 bp	TCGAGAGCTTGGGAAGGAAGTCATAAGGTGAGGAGTTaGCCTGAGACTCACACACAGTCCACGCTGAGCCTG	+
Preference number: 4 (lower is better) Translates to: SRAWEGSHKVRS*PETHTQSTLSL Trigger: CAGGCTCAGCGTGGACTGTGTGTGAGTCTCAGGCAAACTCCTCACCTTATGACTTCCTTCCCAAGCTCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGTCTCTTCTGAGTTCCTCTaGTGTGCGACATCACACAGC	+
Preference number: 4 (lower is better) Translates to: KQTTASHLGTEGGSKAHVSSEFL*CATSHS Trigger: GCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGA...GACATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGGATCTCATGGATCAAGTTaGCCAAGTTTTCTTCTTGCT	+
Preference number: 4 (lower is better) Translates to: KSVSRSGAHTAQWGEEAGSHGSS*PSFLLA Trigger: AGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGA...TCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	ACCACTCTATCCCTGGGTGAGAAAGTATTGACGACTCCTCCTCGCCCAGCTCTGTGGTCTGAAGGTTCATaGGTTTGGCCAGTTCCTCCT	+
Preference number: 4 (lower is better) Translates to: TTLSLGEKVLTTPPRPALWSEGS*VWPVPP Trigger: AGGAGGAACTGGCCAAACGCATGAACCTTCAGACCA...CAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTTGGCCTATGGTCTCCTaGTACTCCTTGTCTCTCGTC	+
Preference number: 4 (lower is better) Translates to: LRKQTTASHLGTEGGSKAWPMVS*YSLSLV Trigger: GACGAGAGACAAGGAGTACCAGGAGACCATAGGCCA...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTGCAGCGTGTCCACCATaGTCTGAAGGTTCATGCGTT	+
Preference number: 4 (lower is better) Translates to: YACSSCLTTSDIVSPYAPAACPP*SEGSCV Trigger: AACGCATGAACCTTCAGACCATGGTGGACACGCTGC...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
3UTR CAA 72 bp	GTATGGAAAGCATGTATGAATGAGGACGGTCCTCACTaGAGGCTTCTCTCCAGTCATTGCCAGCCTGCCAGC	+
Preference number: 4 (lower is better) Translates to: VWKACMNEDGPH*RLLSSHCQPAS Trigger: GCTGGCAGGCTGGCAATGACTGGAGAGAAGCCTCAAGTGAGGACCGTCCTCATTCATACATGCTTTCCATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGTTCGTCTGTACTTCCTaGGTCACTGCTGGCCACGGA	+
Preference number: 4 (lower is better) Translates to: GGNTVYFLEKADHRKSSWFVCTS*VTAGHG Trigger: TCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAA...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCATCTTCTGAGTTCCTCTaGTGTGCGACATCACACAGC	+
Preference number: 4 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPSSEFL*CATSHS Trigger: GCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGA...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGTTCACCTCCCCGTCCTaGTCCGAGATGTCTTCATCC	+
Preference number: 4 (lower is better) Translates to: GGNTVYFLEKADHRKSSWFTSPS*SEMSSS Trigger: GGATGAAGACATCTCGGAGCAGGACGGGGAGGTGAA...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGCCACCTGGAAGATCTTaGACACGTCTTCTGAGTTCC	+
Preference number: 4 (lower is better) Translates to: VYFLEKADHRKSSWDRGRPPGRS*TRLLSS Trigger: GGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGG...CCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	TATGCCTGCTCCAGCTGCCTGACGACTTCAGACATAGTAAGTCCCTATGCCCCTCCACCTGGAAGATCTTaGACACGTCTTCTGAGTTCC	+
Preference number: 4 (lower is better) Translates to: YACSSCLTTSDIVSPYAPPPGRS*TRLLSS Trigger: GGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGG...AGGGGCATAGGGACTTACTATGTCTGAAGTCGTCAGGCAGCTGGAGCAGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGGGACAATAGAAAAATCGACAGCACCATTCCATGGGTCGGTGGTGGAGGAAGGAAGGTCTCCCGCAGCTaGTTAAACATGCGCTTCATC	+
Preference number: 4 (lower is better) Translates to: GDNRKIDSTIPWVGGGGRKVSRS*LNMRFI Trigger: GATGAAGCGCATGTTTAACCAGCTGCGGGAGACCTT...CCTTCCTCCACCACCGACCCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTAAGGTCTCCCGCAGCTaGTTAAACATGCGCTTCATC	+
Preference number: 4 (lower is better) Translates to: LRKQTTASHLGTEGGSKAKVSRS*LNMRFI Trigger: GATGAAGCGCATGTTTAACCAGCTGCGGGAGACCTT...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACACGCTCCAGGTCTTCCTaGATTTCGTCTGTACTTCCT	+
Preference number: 4 (lower is better) Translates to: LKVAQLKGEGTVALHRRTRSRSS*ISSVLP Trigger: AGGAAGTACAGACGAAATCCAGGAAGACCTGGAGCG...TGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGTTCTTAGGGACCACCTaGAAGATCTTGGACACGTCT	+
Preference number: 4 (lower is better) Translates to: VYFLEKADHRKSSWDRGRFLGTT*KILDTS Trigger: AGACGTGTCCAAGATCTTCCAGGTGGTCCCTAAGAA...CCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GTCCTTCATCCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCCTGCAGGTCAATGGTTaGGTTACAGTTGGTAAAATC	+
Preference number: 4 (lower is better) Translates to: VLHPQPSSTLAWSRHRQGLQVNG*VTVGKI Trigger: GATTTTACCAACTGTAACCCAACCATTGACCTGCAG...GCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 72 bp	AGCTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTaGCACTGCATCGACGCACAAAAGTCTGCGTTTGTG	+
Preference number: 4 (lower is better) Translates to: SSKWLSLREKAQ*HCIDAQKSAFV Trigger: CACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	ACACCTGCTAGGAAGAATTCTTTGGAGCTCAAAGTGGCTCAGCTTAAGGGAGAATTCGTCTGTACTTCCTaGGTCACTGCTGGCCACGGA	+
Preference number: 4 (lower is better) Translates to: TPARKNSLELKVAQLKGEFVCTS*VTAGHG Trigger: TCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAA...TTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAGCAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AAGTCTGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCTTCACCTCCCCGTCCTaGTCCGAGATGTCTTCATCC	+
Preference number: 4 (lower is better) Translates to: KSAFVVCVGTIEKSTAPFFTSPS*SEMSSS Trigger: GGATGAAGACATCTCGGAGCAGGACGGGGAGGTGAA...GAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACAAAAGTCTGCGTTTGTCCACCTGGAAGATCTTaGACACGTCTTCTGAGTTCC	+
Preference number: 4 (lower is better) Translates to: LKGEGTVALHRRTKVCVCPPGRS*TRLLSS Trigger: GGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGG...ACAAACGCAGACTTTTGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGATTCTTAGGGACCACCTaGAAGATCTTGGACACGTCT	+
Preference number: 4 (lower is better) Translates to: QRAMGSDPWGHFVPLNSRFLGTT*KILDTS Trigger: AGACGTGTCCAAGATCTTCCAGGTGGTCCCTAAGAA...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	TGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCCATGGTGGCCTATGGTCTCCTaGTACTCCTTGTCTCTCGTC	+
Preference number: 4 (lower is better) Translates to: CVCGVCGDNRKIDSTIPWWPMVS*YSLSLV Trigger: GACGAGAGACAAGGAGTACCAGGAGACCATAGGCCA...CCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGACATTTTGTTCCTTTGAACTCCAGAGGAACCCACTGGGTCAATAAAAACAACTGCTGGCCACGGAGCTaGGGGACGGTGAATTCCTGT	+
Preference number: 4 (lower is better) Translates to: GHFVPLNSRGTHWVNKNNCWPRS*GTVNSC Trigger: ACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCA...GTTGTTTTTATTGACCCAGTGGGTTCCTCTGGAGTTCAAAGGAACAAAATGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	GCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCAT	+
Preference number: 4 (lower is better) Translates to: ALEVTQSTSLRKQTTASHPCLSS*RRIRSH Trigger: ATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGG...ATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGTTCATAGCCTTTTCTTaGATCTTTGTGTCCAGGTCT	+
Preference number: 4 (lower is better) Translates to: ESRPPQVILGQREGAKLMFIAFS*IFVSRS Trigger: AGACCTGGACACAAAGATCCAAGAAAAGGCTATGAA...CATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCAAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTT	+
Preference number: 4 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPKDSVS*IKLPKF Trigger: AAACTTGGGCAACTTGATCCATGAGACCGAATCCTT...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
3UTR CAA 72 bp	CTGTGTACACAGCCATCCCCTCAAACGTTTACGCTGTaGCTTCCTGTCTTAACGCTAGAGATACATGTCAGC	+
Preference number: 4 (lower is better) Translates to: LCTQPSPQTFTL*LPVLTLEIHVS Trigger: GCTGACATGTATCTCTAGCGTTAAGACAGGAAGCAACAGCGTAAACGTTTGAGGGGATGGCTGTGTACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR TCA 90 bp	TGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCCATGGCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCAT	+
Preference number: 4 (lower is better) Translates to: CVCGVCGDNRKIDSTIPWPCLSS*RRIRSH Trigger: ATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGG...CCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	TGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCCATGGCCCAAGTTTTCTTCTTaGTCACCCTGCAGGTCAATG	+
Preference number: 4 (lower is better) Translates to: CVCGVCGDNRKIDSTIPWPKFSS*SPCRSM Trigger: CATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGG...CCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGGGCTGTGTCTTTTCCCAAACAATTGTCCCTCCAAGTACCTGCACAGGGACCATTCATAGCCTTTTCTTaGATCTTTGTGTCCAGGTCT	+
Preference number: 4 (lower is better) Translates to: GAVSFPKQLSLQVPAQGPFIAFS*IFVSRS Trigger: AGACCTGGACACAAAGATCCAAGAAAAGGCTATGAA...TGGTCCCTGTGCAGGTACTTGGAGGGACAATTGTTTGGGAAAAGACACAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	CAGAGGGCCATGGGTTCTGATCCCTGGGGACATTTTGTTCCTTTGAACTCCAGACTGCAGGTCAATGGTTaGGTTACAGTTGGTAAAATC	+
Preference number: 4 (lower is better) Translates to: QRAMGSDPWGHFVPLNSRLQVNG*VTVGKI Trigger: GATTTTACCAACTGTAACCCAACCATTGACCTGCAG...TCTGGAGTTCAAAGGAACAAAATGTCCCCAGGGATCAGAACCCATGGCCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CCA 90 bp	GGACATTTTGTTCCTTTGAACTCCAGAGGAACCCACTGGGTCAATAAAAACAACTCGTTCATCTCCTCCTaGATAGCCTCGGCTTCTTGC	+
Preference number: 4 (lower is better) Translates to: GHFVPLNSRGTHWVNKNNSFISS*IASASC Trigger: GCAAGAAGCCGAGGCTATCCAGGAGGAGATGAACGA...GTTGTTTTTATTGACCCAGTGGGTTCCTCTGGAGTTCAAAGGAACAAAATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	AAGTCTGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCTCTCATGGATCAAGTTaGCCAAGTTTTCTTCTTGCT	+
Preference number: 4 (lower is better) Translates to: KSAFVVCVGTIEKSTAPFSHGSS*PSFLLA Trigger: AGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGA...GAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR GCA 90 bp	ACACCTGCTAGGAAGAATTCTTTGGAGCTCAAAGTGGCTCAGCTTAAGGGAGAATCTCATGGATCAAGTTaGCCAAGTTTTCTTCTTGCT	+
Preference number: 4 (lower is better) Translates to: TPARKNSLELKVAQLKGESHGSS*PSFLLA Trigger: AGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGA...TTCTCCCTTAAGCTGAGCCACTTTGAGCTCCAAAGAATTCTTCCTAGCAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 90 bp	CCACGCCACCGCCTCCCGTGCGCCGCACCTGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGACCGTAGTGCTGCGGGTGCGAGCCGCCGC	+
Preference number: 5 (lower is better) Translates to: PRHRLPCAAPACSSR*SRAGDRSAAGASRR Trigger: GCGGCGGCTCGCACCCGCAGCACTACGGTCGCCTGCCCGGGACCATCTGGAGCTACACGCAGGTGCGGCGCACGGGAGGCGGTGGCGTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS GCA 90 bp	TGCACGCCTACGCCGTCCGGGTGTACCCACGACACGCCGGGGCCCTaGACAGTCTCCACGCCACCGCCTCCCGTGCGCCGCACCTGCGTG	+
Preference number: 5 (lower is better) Translates to: CTPTPSGCTHDTPGP*TVSTPPPPVRRTCV Trigger: CACGCAGGTGCGGCGCACGGGAGGCGGTGGCGTGGAGACTGTGCAGGGCCCCGGCGTGTCGTGGGTACACCCGGACGGCGTAGGCGTGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGACCACCAGCTCGGCCTaGAGCCGCTCAATCTTCTCG	+
Preference number: 5 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRTTSSA*SRSIFS Trigger: CGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGGT...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGACCACCAGCTCGGCCTaGAGCCGCTCAATCTTCTCG	+
Preference number: 5 (lower is better) Translates to: RKEGSSGPAGPPEKGGQKTTSSA*SRSIFS Trigger: CGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGGT...CTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGAGAGGAGGCTGGACCCCATTTGAGGAGGTGGATGTaGGAACCCAGATCGTCCCGC	+
Preference number: 5 (lower is better) Translates to: VSRSGAHTAQWGEEAGPHLRRWM*EPRSSR Trigger: GCGGGACGATCTGGGTTCCAACATCCACCTCCTCAA...ATGGGGTCCAGCCTCCTCTCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS TCA 90 bp	GCCTCGGCTTCTTGCGCCGCCTCCTGCAGCGTGTCCACCATGGTCTaGAGGTTCATGCGTTTGGCCAGTTCCTCCTCCCACCTCCGTTTG	+
Preference number: 5 (lower is better) Translates to: ASASCAASCSVSTMV*RFMRLASSSSHLRL Trigger: CAAACGGAGGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGAAGCCGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGCTGTCTGCAGAGCCTTaGATGAGCCGACGGCAGGTC	+
Preference number: 5 (lower is better) Translates to: GAEGRGRRNNKLPPQLCALSAEP*MSRRQV Trigger: GACCTGCCGTCGGCTCATCAAAGGCTCTGCAGACAG...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTCCTTCATCCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCTTCTCCAGGAGCCGGTaGCGCCGCTCCAGCTCGTGC	+
Preference number: 5 (lower is better) Translates to: VLHPQPSSTLAWSRHRQGFSRSR*RRSSSC Trigger: GCACGAGCTGGAGCGGCGCAACCGGCTCCTGGAGAA...GCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS CCA 90 bp	CAGCTGACCATGGGCTCCACATCCGCCTCCCGCTCCAGGTCTTCCTaGATTTCGTCTGTACTTCCTGAGTCACTGCTGGCCACGGAGCTG	+
Preference number: 5 (lower is better) Translates to: QLTMGSTSASRSRSS*ISSVLPESLLATEL Trigger: CAGCTCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAAATCCAGGAAGACCTGGAGCGGGAGGCGGATGTGGAGCCCATGGTCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 90 bp	CCGCCTCCTGCAGCGTGTCCACCATGGTCTGAAGGTTCATGCGTTTaGCCAGTTCCTCCTCCCACCTCCGTTTGTACTCGTCACGCTCGC	+
Preference number: 5 (lower is better) Translates to: PPPAACPPWSEGSCV*PVPPPTSVCTRHAR Trigger: GCGAGCGTGACGAGTACAAACGGAGGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS GCA 90 bp	CTTGCGCCGCCTCCTGCAGCGTGTCCACCATGGTCTGAAGGTTCATaGGTTTGGCCAGTTCCTCCTCCCACCTCCGTTTGTACTCGTCAC	+
Preference number: 5 (lower is better) Translates to: LAPPPAACPPWSEGS*VWPVPPPTSVCTRH Trigger: GTGACGAGTACAAACGGAGGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCGGCGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGACCACCTGGAAGATCTaGGACACGTCTTCTGAGTTC	+
Preference number: 5 (lower is better) Translates to: KQRSRWASGEGRTEVCVETTWKI*DTSSEF Trigger: GAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGT...CTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGCCCAAGTTTTCTTCTaGCTCACCCTGCAGGTCAAT	+
Preference number: 5 (lower is better) Translates to: KQRSRWASGEGRTEVCVEAQVFF*LTLQVN Trigger: ATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGGC...CTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTCGGTGGTGGAGGAAGGAAGGAAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGTCTCATGGATCAAGTaGCCCAAGTTTTCTTCTTGC	+
Preference number: 5 (lower is better) Translates to: VGGGGRKEAAVPLGLRRRVSWIK*PKFSSC Trigger: GCAAGAAGAAAACTTGGGCAACTTGATCCATGAGAC...CCTTCTCCGGAGGCCCAGCGGGACCGCTGCTTCCTTCCTTCCTCCACCACCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGCCTTTTCTTGGATCTTaGTGTCCAGGTCTGTCATGG	+
Preference number: 5 (lower is better) Translates to: KQRSRWASGEGRTEVCVEPFLGS*CPGLSW Trigger: CCATGACAGACCTGGACACAAAGATCCAAGAAAAGG...CTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	CCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGGCCCAAGTTTTCTTCTaGCTCACCCTGCAGGTCAAT	+
Preference number: 5 (lower is better) Translates to: PEKGGQKSVSRSGAHTAQAQVFF*LTLQVN Trigger: ATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGGC...CTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTTCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTCCTTCATCCACAACCAAGCTCGACCTTGGCCTGGAGTAGACACAGACAGGGCCGCACGTTGAGCCCCTaGAGGAGGTGGATGTTGGAA	+
Preference number: 5 (lower is better) Translates to: VLHPQPSSTLAWSRHRQGRTLSP*RRWMLE Trigger: TTCCAACATCCACCTCCTCAAGGGGCTCAACGTGCG...GCCCTGTCTGTGTCTACTCCAGGCCAAGGTCGAGCTTGGTTGTGGATGAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGCAGCGGTCCCGCTGGGCCTCCGGAGAAGGGAGGACAGAAGTCTGTGTCGAGATGGTTGGGTTACAGTaGGTAAAATCCTCCCATAGC	+
Preference number: 5 (lower is better) Translates to: KQRSRWASGEGRTEVCVEMVGLQ*VKSSHS Trigger: GCTATGGGAGGATTTTACCAACTGTAACCCAACCAT...CTCGACACAGACTTCTGTCCTCCCTTCTCCGGAGGCCCAGCGGGACCGCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGGGACAATAGAAAAATCGACAGCACCATTCCATGGGTCGGTGGTGGAGGAAGGCTGTCTGCAGAGCCTTaGATGAGCCGACGGCAGGTC	+
Preference number: 5 (lower is better) Translates to: GDNRKIDSTIPWVGGGGRLSAEP*MSRRQV Trigger: GACCTGCCGTCGGCTCATCAAAGGCTCTGCAGACAG...CCTTCCTCCACCACCGACCCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGAGCTGAGGGCCGGGGAAGAAGAAACAACAAACTCCCGCCCCAGCTGTGTGCGGTCTCATGGATCAAGTaGCCCAAGTTTTCTTCTTGC	+
Preference number: 5 (lower is better) Translates to: GAEGRGRRNNKLPPQLCAVSWIK*PKFSSC Trigger: GCAAGAAGAAAACTTGGGCAACTTGATCCATGAGAC...CGCACACAGCTGGGGCGGGAGTTTGTTGTTTCTTCTTCCCCGGCCCTCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGGGAGGACAGAAGTCTGTGTCGAGGAGTGGAGCCCACACGGCTCAGTGGGGATCCTTGTCTCTCGTCTaGAAGAAGGATTCGGTCTCA	+
Preference number: 5 (lower is better) Translates to: KGGQKSVSRSGAHTAQWGSLSLV*KKDSVS Trigger: TGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA...TCCCCACTGAGCCGTGTGGGCTCCACTCCTCGACACAGACTTCTGTCCTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GCAACGAACTACGAAACGAACAAACCAAACACTAAGAGGAGGCCAGGCCCAGAGCTGTCTGCAGAGCCTTaGATGAGCCGACGGCAGGTC	+
Preference number: 5 (lower is better) Translates to: ATNYETNKPNTKRRPGPELSAEP*MSRRQV Trigger: GACCTGCCGTCGGCTCATCAAAGGCTCTGCAGACAG...CTCTGGGCCTGGCCTCCTCTTAGTGTTTGGTTTGTTCGTTTCGTAGTTCGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS CCA 90 bp	CTCTTGGCTGTGGCCAGCTCCAGCTCAATCTGGCCTATGGTCTCCTaGTACTCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATGG	+
Preference number: 5 (lower is better) Translates to: LLAVASSSSIWPMVS*YSLSLVLKKDSVSW Trigger: CCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGAGACCATAGGCCAGATTGAGCTGGAGCTGGCCACAGCCAAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS TCA 90 bp	GCGCTTCATCTCATCAGTGATGTTCATGGAGCCGACCTCCTCATCTaGAAACCGATTCACCTCCCCGTCCTGCTCCGAGATGTCTTCATC	+
Preference number: 5 (lower is better) Translates to: ALHLISDVHGADLLI*KPIHLPVLLRDVFI Trigger: GATGAAGACATCTCGGAGCAGGACGGGGAGGTGAATCGGTTTTCAGATGAGGAGGTCGGCTCCATGAACATCACTGATGAGATGAAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS GCA 90 bp	TTAGGGACCACCTGGAAGATCTTGGACACGTCTTCTGAGTTCCTCTaGTGTGCGACATCACACAGCTTAGCCGTGATATCGATTCGGCGG	+
Preference number: 5 (lower is better) Translates to: LGTTWKILDTSSEFL*CATSHSLAVISIRR Trigger: CCGCCGAATCGATATCACGGCTAAGCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS GCA 90 bp	ATGGAGCCGACCTCCTCATCTGAAAACCGATTCACCTCCCCGTCCTaGTCCGAGATGTCTTCATCCGAAGCCACCTTACGATCTTTCTTC	+
Preference number: 5 (lower is better) Translates to: MEPTSSSENRFTSPS*SEMSSSEATLRSFF Trigger: GAAGAAAGATCGTAAGGTGGCTTCGGATGAAGACATCTCGGAGCAGGACGGGGAGGTGAATCGGTTTTCAGATGAGGAGGTCGGCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGTCTGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCACCACCAGCTCGGCCTaGAGCCGCTCAATCTTCTCG	+
Preference number: 5 (lower is better) Translates to: KSAFVVCVGTIEKSTAPFTTSSA*SRSIFS Trigger: CGAGAAGATTGAGCGGCTCAAGGCCGAGCTGGTGGT...GAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCAGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGCCTTTTCTTGGATCTTaGTGTCCAGGTCTGTCATGG	+
Preference number: 5 (lower is better) Translates to: ESRPPQVILGQREGAKLMPFLGS*CPGLSW Trigger: CCATGACAGACCTGGACACAAAGATCCAAGAAAAGG...CATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGGGACAATAGAAAAATCGACAGCACCATTCCATGGGTCGGTGGTGGAGGAAGGACCACCTGGAAGATCTaGGACACGTCTTCTGAGTTC	+
Preference number: 5 (lower is better) Translates to: GDNRKIDSTIPWVGGGGRTTWKI*DTSSEF Trigger: GAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGT...CCTTCCTCCACCACCGACCCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	CTCAAAGTGGCTCAGCTTAAGGGAGAAGGCACAGTTGCACTGCATCGACGCACAGCCCAAGTTTTCTTCTaGCTCACCCTGCAGGTCAAT	+
Preference number: 5 (lower is better) Translates to: LKVAQLKGEGTVALHRRTAQVFF*LTLQVN Trigger: ATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGGC...TGTGCGTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	CCTCCTCCTGCCCTCACAGAAACGGAAATCTTTACAGCAGCTAAGGTCCAGGCCTCCTTGTCTCTCGTCTaGAAGAAGGATTCGGTCTCA	+
Preference number: 5 (lower is better) Translates to: PPPALTETEIFTAAKVQASLSLV*KKDSVS Trigger: TGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA...GGCCTGGACCTTAGCTGCTGTAAAGATTTCCGTTTCTGTGAGGGCAGGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040023.16 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	ACCACTCTATCCCTGGGTGAGAAAGTATTGACGACTCCTCCTCGCCCAGCTCTGCTTCATAGCCTTTTCTaGGATCTTTGTGTCCAGGTC	+
Preference number: 5 (lower is better) Translates to: TTLSLGEKVLTTPPRPALLHSLF*DLCVQV Trigger: GACCTGGACACAAAGATCCAAGAAAAGGCTATGAAG...CAGAGCTGGGCGAGGAGGAGTCGTCAATACTTTCTCACCCAGGGATAGAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCATGATGGTTGGGTTACAGTaGGTAAAATCCTCCCATAGC	+
Preference number: 5 (lower is better) Translates to: ESRPPQVILGQREGAKLMMVGLQ*VKSSHS Trigger: GCTATGGGAGGATTTTACCAACTGTAACCCAACCAT...CATGAGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGGGACAATAGAAAAATCGACAGCACCATTCCATGGGTCGGTGGTGGAGGAAGGCTTCATAGCCTTTTCTaGGATCTTTGTGTCCAGGTC	+
Preference number: 5 (lower is better) Translates to: GDNRKIDSTIPWVGGGGRLHSLF*DLCVQV Trigger: GACCTGGACACAAAGATCCAAGAAAAGGCTATGAAG...CCTTCCTCCACCACCGACCCATGGAATGGTGCTGTCGATTTTTCTATTGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	TTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGAGCAAAGCTCTTCATAGCCTTTTCTaGGATCTTTGTGTCCAGGTC	+
Preference number: 5 (lower is better) Translates to: LRKQTTASHLGTEGGSKALHSLF*DLCVQV Trigger: GACCTGGACACAAAGATCCAAGAAAAGGCTATGAAG...AGCTTTGCTCCCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GCTCTGGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATACCACCTGGAAGATCTaGGACACGTCTTCTGAGTTC	+
Preference number: 5 (lower is better) Translates to: ALEVTQSTSLRKQTTASHTTWKI*DTSSEF Trigger: GAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGT...ATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGGACAGAGGGAGGGTCTCATGGATCAAGTaGCCCAAGTTTTCTTCTTGC	+
Preference number: 5 (lower is better) Translates to: VYFLEKADHRKSSWDRGRVSWIK*PKFSSC Trigger: GCAAGAAGAAAACTTGGGCAACTTGATCCATGAGAC...CCTCCCTCTGTCCCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS TCA 90 bp	ATCTTTCTTCTTAGGGACCACCTGGAAGATCTTGGACACGTCTTCTaGGTTCCTCTGCTGTGCGACATCACACAGCTTAGCCGTGATATC	+
Preference number: 5 (lower is better) Translates to: IFLLRDHLEDLGHVF*VPLLCDITQLSRDI Trigger: GATATCACGGCTAAGCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCTAAGAAGAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 90 bp	TCCTGGTACTCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTTTCTTCTTGCTCACCCTGCAGGTCA	+
Preference number: 5 (lower is better) Translates to: SWYSLSLVLKKDSVS*IKLPKFSSCSPCRS Trigger: TGACCTGCAGGGTGAGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	GGAGGTAACACAGTCTACTTCCTTGAGAAAGCAGACCACCGCAAGTCATCTTGGATGGTTGGGTTACAGTaGGTAAAATCCTCCCATAGC	+
Preference number: 5 (lower is better) Translates to: GGNTVYFLEKADHRKSSWMVGLQ*VKSSHS Trigger: GCTATGGGAGGATTTTACCAACTGTAACCCAACCAT...CCAAGATGACTTGCGGTGGTCTGCTTTCTCAAGGAAGTAGACTGTGTTACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS-3UTR CAA 90 bp	AAGTCTGCGTTTGTGGTGTGTGTGGGGACAATAGAAAAATCGACAGCACCATTCTCCTTGTCTCTCGTCTaGAAGAAGGATTCGGTCTCA	+
Preference number: 5 (lower is better) Translates to: KSAFVVCVGTIEKSTAPFSLSLV*KKDSVS Trigger: TGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA...GAATGGTGCTGTCGATTTTTCTATTGTCCCCACACACACCACAAACGCAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 72 bp	CGCCTCCCGTGCGCCGCACCTGCGTGTAGCTCCAGATaGTCCCGGGCAGGCGACCGTAGTGCTGCGGGTGCG	+
Preference number: 6 (lower is better) Translates to: RLPCAAPACSSR*SRAGDRSAAGA Trigger: CGCACCCGCAGCACTACGGTCGCCTGCCCGGGACCATCTGGAGCTACACGCAGGTGCGGCGCACGGGAGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS CAA 72 bp	CGGAAACGCACGTTGAGCCCCTTGAGGAGGTGGATGTaGGAACCCAGATCGTCCCGCAGCGCCGCCGTTACG	+
Preference number: 6 (lower is better) Translates to: RKRTLSPLRRWM*EPRSSRSAAVT Trigger: CGTAACGGCGGCGCTGCGGGACGATCTGGGTTCCAACATCCACCTCCTCAAGGGGCTCAACGTGCGTTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS TCA 72 bp	TCTTGCGCCGCCTCCTGCAGCGTGTCCACCATGGTCTaGAGGTTCATGCGTTTGGCCAGTTCCTCCTCCCAC	+
Preference number: 6 (lower is better) Translates to: SCAASCSVSTMV*RFMRLASSSSH Trigger: GTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS CCA 72 bp	CGGCTTCTTGCGCCGCCTCCTGCAGCGTGTCCACCATaGTCTGAAGGTTCATGCGTTTGGCCAGTTCCTCCT	+
Preference number: 6 (lower is better) Translates to: RLLAPPPAACPP*SEGSCVWPVPP Trigger: AGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGGCGGCGCAAGAAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS CCA 72 bp	ATGGGCTCCACATCCGCCTCCCGCTCCAGGTCTTCCTaGATTTCGTCTGTACTTCCTGAGTCACTGCTGGCC	+
Preference number: 6 (lower is better) Translates to: MGSTSASRSRSS*ISSVLPESLLA Trigger: GGCCAGCAGTGACTCAGGAAGTACAGACGAAATCCAGGAAGACCTGGAGCGGGAGGCGGATGTGGAGCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS GCA 72 bp	CCTCCTGCAGCGTGTCCACCATGGTCTGAAGGTTCATaGGTTTGGCCAGTTCCTCCTCCCACCTCCGTTTGT	+
Preference number: 6 (lower is better) Translates to: PPAACPPWSEGS*VWPVPPPTSVC Trigger: ACAAACGGAGGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS GCA 72 bp	GGTCTTCCTGGATTTCGTCTGTACTTCCTGAGTCACTaGTGGCCACGGAGCTGGGGGACGGTGAATTCCTGT	+
Preference number: 6 (lower is better) Translates to: GLPGFRLYFLSH*WPRSWGTVNSC Trigger: ACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAAATCCAGGAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 72 bp	CTTCCTGGATTTCGTCTGTACTTCCTGAGTCACTGCTaGCCACGGAGCTGGGGGACGGTGAATTCCTGTCTG	+
Preference number: 6 (lower is better) Translates to: LPGFRLYFLSHC*PRSWGTVNSCL Trigger: CAGACAGGAATTCACCGTCCCCCAGCTCCGTGGCCAGCAGTGACTCAGGAAGTACAGACGAAATCCAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 72 bp	GCAGCGTGTCCACCATGGTCTGAAGGTTCATGCGTTTaGCCAGTTCCTCCTCCCACCTCCGTTTGTACTCGT	+
Preference number: 6 (lower is better) Translates to: AACPPWSEGSCV*PVPPPTSVCTR Trigger: ACGAGTACAAACGGAGGTGGGAGGAGGAACTGGCCAAACGCATGAACCTTCAGACCATGGTGGACACGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174078.2
CDS TCA 72 bp	CTCATCAGTGATGTTCATGGAGCCGACCTCCTCATCTaGAAACCGATTCACCTCCCCGTCCTGCTCCGAGAT	+
Preference number: 6 (lower is better) Translates to: LISDVHGADLLI*KPIHLPVLLRD Trigger: ATCTCGGAGCAGGACGGGGAGGTGAATCGGTTTTCAGATGAGGAGGTCGGCTCCATGAACATCACTGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS GCA 72 bp	ACCTCCTCATCTGAAAACCGATTCACCTCCCCGTCCTaGTCCGAGATGTCTTCATCCGAAGCCACCTTACGA	+
Preference number: 6 (lower is better) Translates to: TSSSENRFTSPS*SEMSSSEATLR Trigger: TCGTAAGGTGGCTTCGGATGAAGACATCTCGGAGCAGGACGGGGAGGTGAATCGGTTTTCAGATGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 72 bp	GTGGCCAGCTCCAGCTCAATCTGGCCTATGGTCTCCTaGTACTCCTTGTCTCTCGTCTTGAAGAAGGATTCG	+
Preference number: 6 (lower is better) Translates to: VASSSSIWPMVS*YSLSLVLKKDS Trigger: CGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGAGACCATAGGCCAGATTGAGCTGGAGCTGGCCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS TCA 72 bp	CTTAGGGACCACCTGGAAGATCTTGGACACGTCTTCTaGGTTCCTCTGCTGTGCGACATCACACAGCTTAGC	+
Preference number: 6 (lower is better) Translates to: LRDHLEDLGHVF*VPLLCDITQLS Trigger: GCTAAGCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGTGGTCCCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS TCA 72 bp	GGCCTATGGTCTCCTGGTACTCCTTGTCTCTCGTCTTaGAGAAGGATTCGGTCTCATGGATCAAGTTGCCCA	+
Preference number: 6 (lower is better) Translates to: GLWSPGTPCLSS*RRIRSHGSSCP Trigger: TGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGAGTACCAGGAGACCATAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS GCA 72 bp	ACCTGGAAGATCTTGGACACGTCTTCTGAGTTCCTCTaGTGTGCGACATCACACAGCTTAGCCGTGATATCG	+
Preference number: 6 (lower is better) Translates to: TWKILDTSSEFL*CATSHSLAVIS Trigger: CGATATCACGGCTAAGCTGTGTGATGTCGCACAGCAGAGGAACTCAGAAGACGTGTCCAAGATCTTCCAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CAA 90 bp	TCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATGGATCAAGTaGCCCAAGTTTTCTTCTTGCTCACCCTGCAGGTCAATGGTTGGG	+
Preference number: 6 (lower is better) Translates to: SLSLVLKKDSVSWIK*PKFSSCSPCRSMVG Trigger: CCCAACCATTGACCTGCAGGGTGAGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2
CDS CCA 72 bp	TCCTTGTCTCTCGTCTTGAAGAAGGATTCGGTCTCATaGATCAAGTTGCCCAAGTTTTCTTCTTGCTCACCC	+
Preference number: 6 (lower is better) Translates to: SLSLVLKKDSVS*IKLPKFSSCSP Trigger: GGGTGAGCAAGAAGAAAACTTGGGCAACTTGATCCATGAGACCGAATCCTTCTTCAAGACGAGAGACAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040023.16 ENSMUST00000123827.9 ENSMUST00000174078.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu