Pregenerated sensors for IER5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089762Ensembl transcript IDs: ENSMUST00000065134.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCACTCAGGAGAGCGGAACGTCGGGCTTCCCGGCTCTTGACAACTaGTTAGAATCGGCGTCCGGGGCCCCGCGCCCTCCTGCGTTGCGC | + |
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Preference number: 1 (lower is better) Translates to: GTQESGTSGFPALDN*LESASGAPRPPALR Trigger: GCGCAACGCAGGAGGGCGCGGGGCCCCGGACGCCGATTCTAATCAGTTGTCAAGAGCCGGGAAGCCCGACGTTCCGCTCTCCTGAGTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR TCA 90 bp | CCAGAAAGGCACTCAGGAGAGCGGAACGTCGGGCTTCCCGGCTCTTaGCAACTGATTAGAATCGGCGTCCGGGGCCCCGCGCCCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PERHSGERNVGLPGS*QLIRIGVRGPAPSC Trigger: GCAGGAGGGCGCGGGGCCCCGGACGCCGATTCTAATCAGTTGTCAAGAGCCGGGAAGCCCGACGTTCCGCTCTCCTGAGTGCCTTTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR GCA 90 bp | AGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCTaGTCGCCCTCCACCCCTTTCCCAACTGTGCTGAGAGTGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SEDRSAGHDGKCSSP*SPSTPFPTVLRVSG Trigger: CCCTGACACTCTCAGCACAGTTGGGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR CCA 90 bp | AACAAAATCTATCGCGCTGAGGACGGAGACAGGGTTCTCACAGGCTaGAACAATGCTGGTTTCATGAGATGGGACCGAAGGCTAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: NKIYRAEDGDRVLTG*NNAGFMRWDRRLKH Trigger: GTGCTTTAGCCTTCGGTCCCATCTCATGAAACCAGCATTGTTCCAGCCTGTGAGAACCCTGTCTCCGTCCTCAGCGCGATAGATTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGGCATGATGGGAAATGTAGTTCGCCCTGCTCGCCCTCCACCCCTTTCCAGTCCGCGAGGCGGGTaGAGGAGGGGGAGGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: VLGMMGNVVRPARPPPLSSPRGG*RRGRRT Trigger: CGTCCTCCTCCCCCTCCTCCACCCGCCTCGCGGACT...GGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CCA 90 bp | GCACAAGGTAACTTAGAAGCGCGCACAATCACTAGAGCTGACCAGGAGCTAAGCCAGCTCAGCCCCGAGTaGCCAGGACCCGCTCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AQGNLEARTITRADQELSQLSPE*PGPARS Trigger: GGAGCGAGCGGGTCCTGGCCACTCGGGGCTGAGCTG...GCTTAGCTCCTGGTCAGCTCTAGTGATTGTGCGCGCTTCTAAGTTACCTTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGGTTCTCACAGGCTGGAACAATGCTGGTTTCATGAGATGGGACCGAAGCTCCCTATCGCCCCTTaGCCGAGTCTTTGTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RQGSHRLEQCWFHEMGPKLPIAP*PSLCLA Trigger: GGCCAGACAAAGACTCGGCCAAGGGGCGATAGGGAG...CTTCGGTCCCATCTCATGAAACCAGCATTGTTCCAGCCTGTGAGAACCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAGGGGGCTGGTTTCATGAGATaGGACCGAAGGCTAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: VGNLFWSPRGVDGRDPEGAGFMR*DRRLKH Trigger: GTGCTTTAGCCTTCGGTCCCATCTCATGAAACCAGC...CCCCTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGGCATGATGGGAAATGTAGTTCGCCCTGCTCGCCCTCCACCCCTTTCCCTCGCTAAACACCACTaGAATCAGTACAATAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLGMMGNVVRPARPPPLSLAKHH*NQYNKK Trigger: CTTTTTATTGTACTGATTGCAGTGGTGTTTAGCGAG...GGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR TCA 72 bp | GAGAGCGGAACGTCGGGCTTCCCGGCTCTTGACAACTaGTTAGAATCGGCGTCCGGGGCCCCGCGCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: ESGTSGFPALDN*LESASGAPRPP Trigger: AGGAGGGCGCGGGGCCCCGGACGCCGATTCTAATCAGTTGTCAAGAGCCGGGAAGCCCGACGTTCCGCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR TCA 72 bp | CACTCAGGAGAGCGGAACGTCGGGCTTCCCGGCTCTTaGCAACTGATTAGAATCGGCGTCCGGGGCCCCGCG | + |
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Preference number: 3 (lower is better) Translates to: HSGERNVGLPGS*QLIRIGVRGPA Trigger: CGCGGGGCCCCGGACGCCGATTCTAATCAGTTGTCAAGAGCCGGGAAGCCCGACGTTCCGCTCTCCTGAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CAA 90 bp | TTTGGAGGCCGCCCCCAGAGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATACCCTTGGCCGAGTCTTaGTCTGGCCCCAGCCCCGCG | + |
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Preference number: 3 (lower is better) Translates to: FGGRPQRGNVTETSLLEIPLAES*SGPSPA Trigger: CGCGGGGCTGGGGCCAGACAAAGACTCGGCCAAGGG...TATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCTCTGGGGGCGGCCTCCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR GCA 72 bp | CGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCTaGTCGCCCTCCACCCCTTTCCCAACTGTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RSAGHDGKCSSP*SPSTPFPTVLR Trigger: TCTCAGCACAGTTGGGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCACTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGGGCATGATGGGAAATGTAGTTCGCCCTGCTCGCCCTCCACCCCTTTCCCTCATTTTGAGAACTTaGGAGGCCGCCCCCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VLGMMGNVVRPARPPPLSLILRT*EAAPRE Trigger: CTCTCTGGGGGCGGCCTCCAAAGTTCTCAAAATGAG...GGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGCTCGCCCTCCACCCCTTTCCCAACTGTGCTGAGAGTGTCAGGGTGCCCACCGAAACGTCCCTTTaGGAGATAGAGTTTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: ALLALHPFPNCAESVRVPTETSL*EIEFAF Trigger: AAAGGCAAACTCTATCTCCAAAAGGGACGTTTCGGT...GGGCACCCTGACACTCTCAGCACAGTTGGGAAAGGGGTGGAGGGCGAGCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR CCA 72 bp | AAGAAGGGCCGGGAAGGCAAGGTTGGCAACTTGTTTTaGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: KKGREGKVGNLF*SPRGVDGRDPE Trigger: CTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAACCTTGCCTTCCCGGCCCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR-3UTR CAA 90 bp | GCACAAGGTAACTTAGAAGCGCGCACAATCACTAGAGCTGACCAGGAGCTAAGCAATCGACTTCCTTTTTaGTTTAGTGAGGACCGCAGT | + |
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Preference number: 3 (lower is better) Translates to: AQGNLEARTITRADQELSNRLPF*FSEDRS Trigger: ACTGCGGTCCTCACTAAACAAAAAAGGAAGTCGATT...GCTTAGCTCCTGGTCAGCTCTAGTGATTGTGCGCGCTTCTAAGTTACCTTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | CCCGTTCCTCACCCCAGAAAGGCACTCAGGAGAGCGGAACGTCGGGCTTCCCGGGGTCCCGGAGCGCCCTaGCCACAGCAGGGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PVPHPRKALRRAERRASRGPGAP*PQQGQW Trigger: CCACTGCCCCTGCTGTGGCCAGGGCGCTCCGGGACC...CCGGGAAGCCCGACGTTCCGCTCTCCTGAGTGCCTTTCTGGGGTGAGGAACGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | GACCCGCTCGCTCCCTATCGCCCCTTGGCCGAGTCTTTGTCTGGCCCCAGCCCCGCACGGTGGTCTGGCTaGTGCAGTGCACGCCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: DPLAPYRPLAESLSGPSPARWSG*CSARRS Trigger: ACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGC...GGGGCTGGGGCCAGACAAAGACTCGGCCAAGGGGCGATAGGGAGCGAGCGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | GGCCAGGACCCGCTCGCTCCCTATCGCCCCTTGGCCGAGTCTTTGTCTGGCCCCTGGTGTTGGTGCAGCTaGTGCTGGAGGTGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GQDPLAPYRPLAESLSGPWCWCS*CWRCSW Trigger: CCAGCTGCACCTCCAGCAGCAGCTGCACCAACACCA...GGGGCCAGACAAAGACTCGGCCAAGGGGCGATAGGGAGCGAGCGGGTCCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR TCA 90 bp | GAAGAAGGGCCGGGAAGGCAAGGTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTCGCACAGCTGCCCGTTaGGCGGCGGCGGCTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EEGPGRQGWQLVLESSGCRTAAR*AAAAAP Trigger: CGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCG...ACACCCCGAGGACTCCAAAACAAGTTGCCAACCTTGCCTTCCCGGCCCTTCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCATGATGGGAAATGTAGTTCGCCCTGCTCGCCCTCCACCCCTTTCCCCACAGCAGGGGCAGTaGGCGGAGGCGCAGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLGMMGNVVRPARPPPLSPQQGQ*AEAQQS Trigger: GGACTGCTGCGCCTCCGCCCACTGCCCCTGCTGTGG...GGAAAGGGGTGGAGGGCGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | CTCGTCCCCAGCTCAGCCCCGAGTGGCCAGGACCCGCTCGCTCCCTATCGCCCCTCAAGTTTGAGATGTTaGACGCGTCCGGGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: LVPSSAPSGQDPLAPYRPSSLRC*TRPGTS Trigger: ACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGA...GGGGCGATAGGGAGCGAGCGGGTCCTGGCCACTCGGGGCTGAGCTGGGGACGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | GAAGAAGGGCCGGGAAGGCAAGGTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGCAGCGGCTCCAAGTaGTGCCCGCGGTGGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: EEGPGRQGWQLVLESSGCCSGSK*CPRWGA Trigger: CGCGCCCCACCGCGGGCAGCACTTGGAGCCGCTGCA...ACACCCCGAGGACTCCAAAACAAGTTGCCAACCTTGCCTTCCCGGCCCTTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | CCCGTTCCTCACCCCAGAAAGGCACTCAGGAGAGCGGAACGTCGGGCTTCCCGGGGCCAGGGTAATACTTaGGCTTGCAACCAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PVPHPRKALRRAERRASRGQGNT*ACNQRR Trigger: CCGCCGCTGGTTGCAAGCGCAAGTATTACCCTGGCC...CCGGGAAGCCCGACGTTCCGCTCTCCTGAGTGCCTTTCTGGGGTGAGGAACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | GTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAGGGGTGCTTGGCGCACAGCTaGCCGTTGAGCGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VGNLFWSPRGVDGRDPEGCLAHS*PLSGGG Trigger: GCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCA...CCCCTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | TGGAGGCCGCCCCCAGAGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAGAAGGCTGGCGAGCGCCTaGTTGGCGCACAGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: WRPPPERKCDRNVPFGDRRLASA*LAHSCP Trigger: CGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCT...TCTATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCTCTGGGGGCGGCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | GTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAGGGGATGCTGATCAGGCTCTaGGCGTCCAGGGCGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: VGNLFWSPRGVDGRDPEGMLIRL*ASRAHS Trigger: GGAGTGCGCCCTGGACGCCCAGAGCCTGATCAGCAT...CCCCTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | TTTGGAGGCCGCCCCCAGAGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATACGGTGGTCTGGCTGCTaGAGTGCACGCCGAAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FGGRPQRGNVTETSLLEIRWSGC*SARRSP Trigger: CGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCG...TATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCTCTGGGGGCGGCCTCCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | GCACAAGGTAACTTAGAAGCGCGCACAATCACTAGAGCTGACCAGGAGCTAAGCGCGAGGTGCTGGTGCTaGTGGTGGGGCGGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AQGNLEARTITRADQELSARCWC*WWGGCC Trigger: ACAGCAGCCGCCCCACCACCAGCACCAGCACCTCGC...GCTTAGCTCCTGGTCAGCTCTAGTGATTGTGCGCGCTTCTAAGTTACCTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | AGACAGGGTTCTCACAGGCTGGAACAATGCTGGTTTCATGAGATGGGACCGAAGGTCTGGCTGCTGCAGTaGACGCCGAAGTCCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RQGSHRLEQCWFHEMGPKVWLLQ*TPKSEG Trigger: CCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGAC...CTTCGGTCCCATCTCATGAAACCAGCATTGTTCCAGCCTGTGAGAACCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | GTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAGGGGGGTAATACTTGCGCTTaGAACCAGCGGCGGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGNLFWSPRGVDGRDPEGGNTCA*NQRRTP Trigger: TGGCGTCCGCCGCTGGTTGCAAGCGCAAGTATTACC...CCCCTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | TTTTTGTTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCTTGAGCGGCGGCGGCTaGTCCGAGGAGTCCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLFSEDRSAGHDGKCSSPLSGGG*SEESGC Trigger: ACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAA...GGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAACAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR TCA 90 bp | CAGAGACCCAGAGGGGCACTAAGCGAACCTCACCTTCTCACAACAAAAGGCTTTTGCGCAGGGAGATGCTaGTCAGGCTCTGGGCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRPRGALSEPHLLTTKGFCAGRC*SGSGRP Trigger: TGGACGCCCAGAGCCTGATCAGCATCTCCCTGCGCA...AAAGCCTTTTGTTGTGAGAAGGTGAGGTTCGCTTAGTGCCCCTCTGGGTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR GCA 90 bp | AGACAGGGTTCTCACAGGCTGGAACAATGCTGGTTTCATGAGATGGGACCGAAGAGAGCTGGCGCGCGTTaGGGAGCACGTAGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: RQGSHRLEQCWFHEMGPKRAGAR*GARRTP Trigger: TGGTGTCCTACGTGCTCCGCAACGCGCGCCAGCTCT...CTTCGGTCCCATCTCATGAAACCAGCATTGTTCCAGCCTGTGAGAACCCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | TTTTTGTTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCTCCAGCACGGTGGTCTaGCTGCTGCAGTGCACGCCG | + |
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Preference number: 4 (lower is better) Translates to: FLFSEDRSAGHDGKCSSPSSTVV*LLQCTP Trigger: CGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGA...GGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| 3UTR CAA 72 bp | AGGAGGAAGAAGGGCCGGGAAGGCAAGGTTGGCAACTaGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RRKKGREGKVGN*FWSPRGVDGRD Trigger: GTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAACCTTGCCTTCCCGGCCCTTCTTCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR TCA 90 bp | GTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTTGATGGCAGAGACCCAGAGGGGGATGGAGATCAAGTTTaGGATGTTGGACGCGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VGNLFWSPRGVDGRDPEGDGDQV*DVGRVR Trigger: CCGGACGCGTCCAACATCTCAAACTTGATCTCCATC...CCCCTCTGGGTCTCTGCCATCAACACCCCGAGGACTCCAAAACAAGTTGCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | TTTTTGTTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCCCAGGTCCAGCACGGTaGTCTGGCTGCTGCAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLFSEDRSAGHDGKCSSPPGPAR*SGCCSA Trigger: TGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGG...GGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR TCA 90 bp | GCACAAGGTAACTTAGAAGCGCGCACAATCACTAGAGCTGACCAGGAGCTAAGCGTAGAAGCCAGTGGATaGGGAAGGGGCTGTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQGNLEARTITRADQELSVEASG*GRGCRG Trigger: GCCTCTACAGCCCCTTCCTCATCCACTGGCTTCTAC...GCTTAGCTCCTGGTCAGCTCTAGTGATTGTGCGCGCTTCTAAGTTACCTTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | AGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAGAGTTTGCCTTTGTTTTTCCGCCGCCGCCAAGTTaGAGCGGGCCGAAGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGNVTETSLLEIEFAFVFPPPPS*SGPKSA Trigger: GGCCGACTTCGGCCCGCTCCAACTTGGCGGCGGCGG...AAAAACAAAGGCAAACTCTATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | GCTTTTAAATTAAACAAAATCTATCGCGCTGAGGACGGAGACAGGGTTCTCACACCGCCGTGCAGCCCCTaGGCGCCGGGTGTTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: AFKLNKIYRAEDGDRVLTPPCSP*APGVGV Trigger: AACACCAACACCCGGCGCCCAGGGGCTGCACGGCGG...TGTGAGAACCCTGTCTCCGTCCTCAGCGCGATAGATTTTGTTTAATTTAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | AGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAGAGTTTGCCTTTGTTTTTTCCAGGCGCCGAGGCTaGCGAGCGCCTGCTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RGNVTETSLLEIEFAFVFSRRRG*RAPAWR Trigger: GCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGA...AAAAACAAAGGCAAACTCTATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | TTTGGAGGCCGCCCCCAGAGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAAGCCGTTTTCTACCGTaGTCACCACGTGAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FGGRPQRGNVTETSLLEISRFLP*SPRECP Trigger: TGGACACTCACGTGGTGACCACGGTAGAAAACGGCT...TATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCTCTGGGGGCGGCCTCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR TCA 90 bp | AGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAGAGTTTGCCTTTGTTTTTACCGTGGTCACCACGTaGGTGTCCAGGTCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: RGNVTETSLLEIEFAFVFTVVTT*VSRSST Trigger: CGTGCTGGACCTGGACACTCACGTGGTGACCACGGT...AAAAACAAAGGCAAACTCTATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | AGAGGAAATGTGACCGAAACGTCCCTTTTGGAGATAGAGTTTGCCTTTGTTTTTGCCGGGTGTTGGTGTTaGTGCAGCTGCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGNVTETSLLEIEFAFVFAGCWC*CSCCWR Trigger: CCTCCAGCAGCAGCTGCACCAACACCAACACCCGGC...AAAAACAAAGGCAAACTCTATCTCCAAAAGGGACGTTTCGGTCACATTTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CCA 90 bp | TTTTTGTTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCAGCCCGAGCCAAAGATaGAGATCAAGTTTGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSEDRSAGHDGKCSSPSPSQR*RSSLRC Trigger: ACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCT...GGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | CGAGTCCAGGCGCCGAGGCTGGCGAGCGCCTGCTTGGCGCACAGCTaGCCGTTGAGCGGCGGCGGCTGCTCCGAGGAGTCCGGCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVQAPRLASACLAHS*PLSGGGCSEESGCR Trigger: CCGACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGACTCG 76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | CGTCCCCGCCGCCGCCAAGTTGGAGCGGGCCGAAGTCGGCCGCGCTaGCCGGCATTCCGGGCGCCGCGTAAGCGAGGTGCTGGTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPRRRQVGAGRSRPR*PAFRAPRKRGAGAG Trigger: ACCAGCACCAGCACCTCGCTTACGCGGCGCCCGGAATGCCGGCCAGCGCGGCCGACTTCGGCCCGCTCCAACTTGGCGGCGGCGGGGACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | CGCTTGCAACCAGCGGCGGACGCCAGACCGGGTCCCGGAGCGCCCTaGCCACAGCAGGGGCAGTGGGCGGAGGCGCAGCAGTCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQPAADARPGPGAP*PQQGQWAEAQQSWC Trigger: GCACCAGGACTGCTGCGCCTCCGCCCACTGCCCCTGCTGTGGCCAGGGCGCTCCGGGACCCGGTCTGGCGTCCGCCGCTGGTTGCAAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS TCA 90 bp | AGGCGCCGAGGCTGGCGAGCGCCTGCTTGGCGCACAGCTGCCCGTTaGGCGGCGGCGGCTGCTCCGAGGAGTCCGGCTGTCGGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRGWRAPAWRTAAR*AAAAAPRSPAVGSP Trigger: TGGTGAGCCGACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | GCGAGCGCCTGCTTGGCGCACAGCTGCCCGTTGAGCGGCGGCGGCTaGTCCGAGGAGTCCGGCTGTCGGCTCACCAGCCCCGAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASACLAHSCPLSGGG*SEESGCRLTSPEKP Trigger: GGGCTTCTCGGGGCTGGTGAGCCGACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | GGCCAGGACCCGCTCGCTCCCTATCGCCCCTTGGCCGAGTCTTTGTCTGGCCCCCCCGCCGCCGCCAAGTaGGAGCGGGCCGAAGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQDPLAPYRPLAESLSGPPAAAK*ERAEVG Trigger: GCCGACTTCGGCCCGCTCCAACTTGGCGGCGGCGGG...GGGGCCAGACAAAGACTCGGCCAAGGGGCGATAGGGAGCGAGCGGGTCCTGGCC 73% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | AAGGCGACAATGGCTCGAGTCCAGGCGCCGAGGCTGGCGAGCGCCTaGTTGGCGCACAGCTGCCCGTTGAGCGGCGGCGGCTGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KATMARVQAPRLASA*LAHSCPLSGGGCSE Trigger: CTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGACTCGAGCCATTGTCGCCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | CCGTGGTCACCACGTGAGTGTCCAGGTCCAGCACGGTGGTCTGGCTaGTGCAGTGCACGCCGAAGTCCGAGGGGGCCGGGTACGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWSPRECPGPARWSG*CSARRSPRGPGTRP Trigger: GGGGCGCGTACCCGGCCCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGGTGACCACGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | TGGTCACCACGTGAGTGTCCAGGTCCAGCACGGTGGTCTGGCTGCTaGAGTGCACGCCGAAGTCCGAGGGGGCCGGGTACGCGCCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WSPRECPGPARWSGC*SARRSPRGPGTRPG Trigger: ACCGGGGCGCGTACCCGGCCCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGGTGACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | CCCGTTCCTCACCCCAGAAAGGCACTCAGGAGAGCGGAACGTCGGGCTTCCCGGCTGGCGAGCGCCTGCTaGGCGCACAGCTGCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPHPRKALRRAERRASRLASAC*AHSCPL Trigger: CAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAG...CCGGGAAGCCCGACGTTCCGCTCTCCTGAGTGCCTTTCTGGGGTGAGGAACGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | CCTCTTCGTCGTCCTCTTCCTCCTGGCCAGGGTAATACTTGCGCTTaGAACCAGCGGCGGACGCCAGACCGGGTCCCGGAGCGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLRRPLPPGQGNTCA*NQRRTPDRVPERPG Trigger: GCCAGGGCGCTCCGGGACCCGGTCTGGCGTCCGCCGCTGGTTGCAAGCGCAAGTATTACCCTGGCCAGGAGGAAGAGGACGACGAAGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 90 bp | CCGCGTCCTCTTCGTCGTCCTCTTCCTCCTGGCCAGGGTAATACTTaGGCTTGCAACCAGCGGCGGACGCCAGACCGGGTCCCGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRPLRRPLPPGQGNT*ACNQRRTPDRVPER Trigger: GCGCTCCGGGACCCGGTCTGGCGTCCGCCGCTGGTTGCAAGCGCAAGTATTACCCTGGCCAGGAGGAAGAGGACGACGAAGAGGACGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | CGTTTTCTACCGTGGTCACCACGTGAGTGTCCAGGTCCAGCACGGTaGTCTGGCTGCTGCAGTGCACGCCGAAGTCCGAGGGGGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFLPWSPRECPGPAR*SGCCSARRSPRGPG Trigger: ACCCGGCCCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGGTGACCACGGTAGAAAACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | GGGCGGAGGCGCAGCAGTCCTGGTGCAAGTAGCCGTTTTCTACCGTaGTCACCACGTGAGTGTCCAGGTCCAGCACGGTGGTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRRSSPGASSRFLP*SPRECPGPARWSGC Trigger: GCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGGTGACCACGGTAGAAAACGGCTACTTGCACCAGGACTGCTGCGCCTCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | TTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCTGCTCGGCGCACAGCTGCCCGTaGAGCGGCGGCGGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSEDRSAGHDGKCSSPCSAHSCP*SGGGCS Trigger: GGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGC...CGAGCAGGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | GCCCCGAGAAGCCCGAGCCAAAGATGGAGATCAAGTTTGAGATGTTaGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCCTCGAAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: APRSPSQRWRSSLRC*TRPGTSPGRSPRSG Trigger: CCCGCTTCGAGGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 90 bp | AGTCCGGCTGTCGGCTCACCAGCCCCGAGAAGCCCGAGCCAAAGATaGAGATCAAGTTTGAGATGTTGGACGCGTCCGGGGACGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPAVGSPAPRSPSQR*RSSLRCWTRPGTSP Trigger: CGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGCTGGTGAGCCGACAGCCGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS TCA 90 bp | GCTCACCAGCCCCGAGAAGCCCGAGCCAAAGATGGAGATCAAGTTTaGGATGTTGGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AHQPREARAKDGDQV*DVGRVRGRVRAEVL Trigger: GAGGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGCTGGTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | GAAGAAGGGCCGGGAAGGCAAGGTTGGCAACTTGTTTTGGAGTCCTCGGGGTGTCGCCGGGTGTTGGTGTaGGTGCAGCTGCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EEGPGRQGWQLVLESSGCRRVLV*VQLLLE Trigger: CTCCAGCAGCAGCTGCACCAACACCAACACCCGGCG...ACACCCCGAGGACTCCAAAACAAGTTGCCAACCTTGCCTTCCCGGCCCTTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTAGTGAGGACCGCAGTGCTGGGCATGATGGGAAATGTAGTTCGCCCCCTGGGCGCCGGGTGTaGGTGTTGGTGCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSEDRSAGHDGKCSSPPGRRV*VLVQLL Trigger: CAGCAGCTGCACCAACACCAACACCCGGCGCCCAGG...GGGCGAACTACATTTCCCATCATGCCCAGCACTGCGGTCCTCACTAAACAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | CAGAGACCCAGAGGGGCACTAAGCGAACCTCACCTTCTCACAACAAAAGGCTTTCGGGAGCTGTGGATCTaGCGCAGGGAGATGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QRPRGALSEPHLLTTKGFRELWI*RREMLI Trigger: GATCAGCATCTCCCTGCGCAAGATCCACAGCTCCCG...AAAGCCTTTTGTTGTGAGAAGGTGAGGTTCGCTTAGTGCCCCTCTGGGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | CAGAGACCCAGAGGGGCACTAAGCGAACCTCACCTTCTCACAACAAAAGGCTTTATCAAGTTTGAGATGTaGGACGCGTCCGGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRPRGALSEPHLLTTKGFIKFEM*DASGDE Trigger: CTCGTCCCCGGACGCGTCCAACATCTCAAACTTGAT...AAAGCCTTTTGTTGTGAGAAGGTGAGGTTCGCTTAGTGCCCCTCTGGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS-3UTR CAA 90 bp | GCTTTTAAATTAAACAAAATCTATCGCGCTGAGGACGGAGACAGGGTTCTCACAAGATGGAGATCAAGTTaGAGATGTTGGACGCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AFKLNKIYRAEDGDRVLTRWRSS*RCWTRP Trigger: CGGACGCGTCCAACATCTCAAACTTGATCTCCATCT...TGTGAGAACCCTGTCTCCGTCCTCAGCGCGATAGATTTTGTTTAATTTAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 72 bp | CCAGCGGCGGACGCCAGACCGGGTCCCGGAGCGCCCTaGCCACAGCAGGGGCAGTGGGCGGAGGCGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAADARPGPGAP*PQQGQWAEAQQ Trigger: CTGCTGCGCCTCCGCCCACTGCCCCTGCTGTGGCCAGGGCGCTCCGGGACCCGGTCTGGCGTCCGCCGCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 90 bp | CAGGCGCCGAGGCTGGCGAGCGCCTGCTTGGCGCACAGCTGCCCGTaGAGCGGCGGCGGCTGCTCCGAGGAGTCCGGCTGTCGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QAPRLASACLAHSCP*SGGGCSEESGCRLT Trigger: GGTGAGCCGACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | GCGCCGAGGCTGGCGAGCGCCTGCTTGGCGCACAGCTaGCCGTTGAGCGGCGGCGGCTGCTCCGAGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: APRLASACLAHS*PLSGGGCSEES Trigger: GGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGC 76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 72 bp | GCTCGAGTCCAGGCGCCGAGGCTGGCGAGCGCCTGCTaGGCGCACAGCTGCCCGTTGAGCGGCGGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARVQAPRLASAC*AHSCPLSGGGC Trigger: GCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGACTCGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS TCA 72 bp | GGCTGGCGAGCGCCTGCTTGGCGCACAGCTGCCCGTTaGGCGGCGGCGGCTGCTCCGAGGAGTCCGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GWRAPAWRTAAR*AAAAAPRSPAV Trigger: GACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | ATGGCTCGAGTCCAGGCGCCGAGGCTGGCGAGCGCCTaGTTGGCGCACAGCTGCCCGTTGAGCGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: MARVQAPRLASA*LAHSCPLSGGG Trigger: GCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGACTCGAGCCAT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 72 bp | CGCCGCCAAGTTGGAGCGGGCCGAAGTCGGCCGCGCTaGCCGGCATTCCGGGCGCCGCGTAAGCGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRQVGAGRSRPR*PAFRAPRKRGA Trigger: AGCACCTCGCTTACGCGGCGCCCGGAATGCCGGCCAGCGCGGCCGACTTCGGCCCGCTCCAACTTGGCGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | TGCTTGGCGCACAGCTGCCCGTTGAGCGGCGGCGGCTaGTCCGAGGAGTCCGGCTGTCGGCTCACCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLAHSCPLSGGG*SEESGCRLTSP Trigger: GGGGCTGGTGAGCCGACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 72 bp | AGGCTGGCGAGCGCCTGCTTGGCGCACAGCTGCCCGTaGAGCGGCGGCGGCTGCTCCGAGGAGTCCGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLASACLAHSCP*SGGGCSEESGC Trigger: ACAGCCGGACTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 90 bp | GCGACAATGGCTCGAGTCCAGGCGCCGAGGCTGGCGAGCGCCTGCTaGGCGCACAGCTGCCCGTTGAGCGGCGGCGGCTGCTCCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATMARVQAPRLASAC*AHSCPLSGGGCSEE Trigger: CTCCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTGGACTCGAGCCATTGTCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | GTGTCCAGGTCCAGCACGGTGGTCTGGCTGCTGCAGTaGACGCCGAAGTCCGAGGGGGCCGGGTACGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSRSSTVVWLLQ*TPKSEGAGYAP Trigger: GGGCGCGTACCCGGCCCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | CCACGTGAGTGTCCAGGTCCAGCACGGTGGTCTGGCTaGTGCAGTGCACGCCGAAGTCCGAGGGGGCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRECPGPARWSG*CSARRSPRGPG Trigger: ACCCGGCCCCCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | CGTCCTCTTCCTCCTGGCCAGGGTAATACTTGCGCTTaGAACCAGCGGCGGACGCCAGACCGGGTCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPLPPGQGNTCA*NQRRTPDRVPE Trigger: CTCCGGGACCCGGTCTGGCGTCCGCCGCTGGTTGCAAGCGCAAGTATTACCCTGGCCAGGAGGAAGAGGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 72 bp | CCGTGGTCACCACGTGAGTGTCCAGGTCCAGCACGGTaGTCTGGCTGCTGCAGTGCACGCCGAAGTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWSPRECPGPAR*SGCCSARRSPR Trigger: CCTCGGACTTCGGCGTGCACTGCAGCAGCCAGACCACCGTGCTGGACCTGGACACTCACGTGGTGACCACGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS GCA 72 bp | CTTCGTCGTCCTCTTCCTCCTGGCCAGGGTAATACTTaGGCTTGCAACCAGCGGCGGACGCCAGACCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRRPLPPGQGNT*ACNQRRTPDRV Trigger: GACCCGGTCTGGCGTCCGCCGCTGGTTGCAAGCGCAAGTATTACCCTGGCCAGGAGGAAGAGGACGACGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 72 bp | GCCCCGAGAAGCCCGAGCCAAAGATGGAGATCAAGTTaGAGATGTTGGACGCGTCCGGGGACGAGTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: APRSPSQRWRSS*RCWTRPGTSPG Trigger: GCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 90 bp | AGCCCCGAGAAGCCCGAGCCAAAGATGGAGATCAAGTTTGAGATGTaGGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCCTCGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPEKPEPKMEIKFEM*DASGDESGQKSSKR Trigger: CCGCTTCGAGGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CAA 90 bp | GGCTCACCAGCCCCGAGAAGCCCGAGCCAAAGATGGAGATCAAGTTaGAGATGTTGGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPAPRSPSQRWRSS*RCWTRPGTSPGRSP Trigger: AGGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGCTGGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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| CDS CCA 72 bp | CGCAGCAGTCCTGGTGCAAGTAGCCGTTTTCTACCGTaGTCACCACGTGAGTGTCCAGGTCCAGCACGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSPGASSRFLP*SPRECPGPARW Trigger: CCACCGTGCTGGACCTGGACACTCACGTGGTGACCACGGTAGAAAACGGCTACTTGCACCAGGACTGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
||
| CDS CCA 72 bp | GTCGGCTCACCAGCCCCGAGAAGCCCGAGCCAAAGATaGAGATCAAGTTTGAGATGTTGGACGCGTCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSPAPRSPSQR*RSSLRCWTRPG Trigger: CCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTTCTCGGGGCTGGTGAGCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
||
| CDS CCA 72 bp | AGCCCGAGCCAAAGATGGAGATCAAGTTTGAGATGTTaGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSQRWRSSLRC*TRPGTSPGRSP Trigger: AGGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
||
| CDS CAA 72 bp | AAGCCCGAGCCAAAGATGGAGATCAAGTTTGAGATGTaGGACGCGTCCGGGGACGAGTCCGGGCAGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPEPKMEIKFEM*DASGDESGQKS Trigger: GGACTTCTGCCCGGACTCGTCCCCGGACGCGTCCAACATCTCAAACTTGATCTCCATCTTTGGCTCGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065134.4 |
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