Pregenerated sensors for IDUA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033540Ensembl transcript IDs: ENSMUST00000071650.13, ENSMUST00000112563.9, ENSMUST00000119212.8, ENSMUST00000139734.2, ENSMUST00000140620.8
Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCAGCTGTCCATGTGTCAGGGGCAGTGCACGGAGCCGGCTGACCTaGCCAGGTGGCTTCAAGGGGCGTGTGCATACATGCACCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ISCPCVRGSARSRLT*PGGFKGRVHTCTSR Trigger: CCTGCTGGTGCATGTATGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACATGGACAGCTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | GGACTGTGGTACTCCAGGCCGCTGCGGAGCCTTCAGGGTGATGGGTaGTGGCCAGGACACCCACTGTATGATTGCTGTCCAACACAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GLWYSRPLRSLQGDG*WPGHPLYDCCPTQP Trigger: GGGCTGTGTTGGACAGCAATCATACAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGCAGCGGCCTGGAGTACCACAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | GGTGTCATCACTAGTGTAGATGAGGACTGTGGTACTCCAGGCCGCTaGGGAGCCTTCAGGGTGATGGGTGCTGGCCAGGACACCCACTGT | + |
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Preference number: 1 (lower is better) Translates to: GVITSVDEDCGTPGR*GAFRVMGAGQDTHC Trigger: ACAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGCAGCGGCCTGGAGTACCACAGTCCTCATCTACACTAGTGATGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | AACTCAGGGAAGAGCTGCTGGACCTGCTCCACAACTGCCATCTCCTaGTCCAGGATGGCGATGGAGCTACCTGCACCCTTCTTGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: NSGKSCWTCSTTAIS*SRMAMELPAPFLCR Trigger: CCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGATGGCAGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | CCAGTCAGCACAGATTCACAAGTCACTAGGAGCCAGTGGCTCTCATaGGGCAGGGACATCCAGGTAAGTCACAGGGTCGGAGAAGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: PVSTDSQVTRSQWLS*GRDIQVSHRVGEGA Trigger: GGCCCCTTCTCCGACCCTGTGACTTACCTGGATGTCCCTGCCTCATGAGAGCCACTGGCTCCTAGTGACTTGTGAATCTGTGCTGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | TCTTGTGCAGGGAGATGTAATCCAGACGCACGCCCACCTCGCCAGTaGAGAAGTTGGTTCCATTGGCACAGTGACCCAGGAGGCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SCAGRCNPDARPPRQ*RSWFHWHSDPGGSS Trigger: GCTGGAGCCTCCTGGGTCACTGTGCCAATGGAACCAACTTCTTCACTGGCGAGGTGGGCGTGCGTCTGGATTACATCTCCCTGCACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | GGTATCCTTGAACTCAGGGAAGAGCTGCTGGACCTGCTCCACAACTaGCATCTCCTGCTCCAGGATGGCGATGGAGCTACCTGCACCCTT | + |
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Preference number: 1 (lower is better) Translates to: GILELREELLDLLHN*HLLLQDGDGATCTL Trigger: AAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGATGGCAGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTTCAAGGATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CTTCACCACCAGGGCCGCATAAGTCACATCAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAGAGGGTCTGCCTCGTCATTGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: LHHQGRISHISSPRL*QGPAHQRVCLVIVN Trigger: ATTTACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCTGATGTGACTTATGCGGCCCTGGTGGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | GCGCATGGAGGAACTGCTGTTGGCAAACAGCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAGGGCCGCATAAGTCACATCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AHGGTAVGKQQVLVL*NDLHHQGRISHISS Trigger: AGAGCTGATGTGACTTATGCGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCATGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CCCCATGACTGTGAGTACTGGCTTTCGCAGCAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTGGAATCGAGCAGTAAGTGTGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: PHDCEYWLSQQLHVG*VSIVDLESSSKCAL Trigger: CAGCGCACACTTACTGCTCGATTCCAGGTCAACAATACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACAGTCATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | GGGAGAAAGGGTACGGGTGGTAGCTCAGGAAGGCATTGTCATTGCTaGGGAGCACATAGCGCATGGAGGAACTGCTGTTGGCAAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: GRKGTGGSSGRHCHC*GAHSAWRNCCWQTA Trigger: TGCTGTTTGCCAACAGCAGTTCCTCCATGCGCTATGTGCTCCTCAGCAATGACAATGCCTTCCTGAGCTACCACCCGTACCCTTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | ATGACTGTGAGTACTGGCTTTCGCAGCAACTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAATCGAGCAGTAAGTGTGCGCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: MTVSTGFRSNCTWGG*VLLTWNRAVSVRWE Trigger: CTCCCAGCGCACACTTACTGCTCGATTCCAGGTCAACAATACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACAGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | TGGAGGAACTGCTGTTGGCAAACAGCAGGTTCTGGTGCTGTGCAATaGCCTTCACCACCAGGGCCGCATAAGTCACATCAGCTCTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: WRNCCWQTAGSGAVQ*PSPPGPHKSHQLSK Trigger: CTTGGAGAGCTGATGTGACTTATGCGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | CAGGACACCCACTGTATGATTGCTGTCCAACACAGCCCCAGCCTTTaGGACCTCTGCCCAGAGTTGTTCTCCATACAGCAGCTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QDTHCMIAVQHSPSL*DLCPELFSIQQLEE Trigger: TTCCTCCAGCTGCTGTATGGAGAACAACTCTGGGCAGAGGTCTCAAAGGCTGGGGCTGTGTTGGACAGCAATCATACAGTGGGTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | ATCAGCTCTCCAAGGTTGTGGCAGGGACCAGCCCACCAGAGGGTCTaGCTCGTCATTGTAAATAGGGGTATCCTTGAACTCAGGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: ISSPRLWQGPAHQRV*LVIVNRGILELREE Trigger: CTCTTCCCTGAGTTCAAGGATACCCCTATTTACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | ACCTGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTaGCCTGTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: TWSLQFQVDWKAREP*PVSVPSTNTRTIGI Trigger: TATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | TGTTTTCTTAAACTAGTGATTGATGTGGGAGGGTCCAGACCGTTGTaGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: CFLKLVIDVGGSRPL*VGAHPLAGDPGMCK Trigger: CTTACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGGTCTGGACCCTCCCACATCAATCACTAGTTTAAGAAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | GGCCTCCTGTTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTaGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: GLLLIGAYSSPFWEN*ISYVHRHLEPTRSS Trigger: AGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | TACAGCCCACCCAACAGGGTCTGGAAAAACGCTGCCTACCTTGTGTaGTCATGGACACGTTGTCAAAGTCATGGTGGTCTGGTTCATTCC | + |
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Preference number: 1 (lower is better) Translates to: YSPPNRVWKNAAYLV*SWTRCQSHGGLVHS Trigger: GGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGGTGGGCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | GACCTCTGCCCAGAGTTGTTCTCCATACAGCAGCTGGAGGAAATATaGTTTTGCACCTTCCCAGCATGTTCCCTCAATACAGGATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: DLCPELFSIQQLEEI*FCTFPACSLNTGCA Trigger: GGCACATCCTGTATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAACTCTGGGCAGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CCACCCAACAGGGTCTGGAAAAACGCTGCCTACCTTGTGTGGTCATaGACACGTTGTCAAAGTCATGGTGGTCTGGTTCATTCCAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: PPNRVWKNAAYLVWS*TRCQSHGGLVHSKS Trigger: AGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | CTGACAGTCAGCTGCCTAGCTAATGGCAGTCTAGCTCATACTGGTTaGCTCCATTCACCAGTCAGCACAGATTCACAAGTCACTAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LTVSCLANGSLAHTG*LHSPVSTDSQVTRS Trigger: GCTCCTAGTGACTTGTGAATCTGTGCTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGACTGCCATTAGCTAGGCAGCTGACTGTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR GCA 90 bp | TGCCCAGAGTTGTTCTCCATACAGCAGCTGGAGGAAATATGCTTTTaGACCTTCCCAGCATGTTCCCTCAATACAGGATGTGCCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CPELFSIQQLEEICF*TFPACSLNTGCARL Trigger: AAGCCTGGCACATCCTGTATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAACTCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | GTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTaGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: VPHLNFLNSWAWGGR*AKVTPTGPIKCLAT Trigger: TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | GCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATaGGGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAG | + |
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Preference number: 1 (lower is better) Translates to: AIFPVPHLNFLNSWA*GGRWAKVTPTGPIK Trigger: CTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CTTCACCTTTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTaGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LHLSGKTGSHMSTGT*SPHAHLTRPKSAVH Trigger: ATGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | AAAGTAGACGGCCTCCTGTTGATTGGGGCATACTCTTCACCTTTCTaGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACA | + |
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Preference number: 1 (lower is better) Translates to: KVDGLLLIGAYSSPF*ENWISYVHRHLEPT Trigger: TGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAGGCCGTCTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CCAGCCTTTGAGACCTCTGCCCAGAGTTGTTCTCCATACAGCAGCTaGAGGAAATATGCTTTTGCACCTTCCCAGCATGTTCCCTCAATA | + |
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Preference number: 1 (lower is better) Translates to: PAFETSAQSCSPYSS*RKYAFAPSQHVPSI Trigger: TATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAACTCTGGGCAGAGGTCTCAAAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CGCTGCCTACCTTGTGTGGTCATGGACACGTTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTTGGAAACGTGT | + |
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Preference number: 1 (lower is better) Translates to: RCLPCVVMDTLSKSW*SGSFQVSKFHLETC Trigger: ACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | AAACGCTGCCTACCTTGTGTGGTCATGGACACGTTGTCAAAGTCATaGTGGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTTGGAAACG | + |
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Preference number: 1 (lower is better) Translates to: KRCLPCVVMDTLSKS*WSGSFQVSKFHLET Trigger: CGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | TCTGAACACAAGTCCCTGGGCCTGCACAGCAAGCACTTTATCTACTaGGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SEHKSLGLHSKHFIY*AIFPVPHLNFLNSW Trigger: CCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | CCTTCCCAGCATGTTCCCTCAATACAGGATGTGCCAGGCTTTACATaGTCTTTTTCACTTTGTGACTCAGCACATACAGAAGCAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: PSQHVPSIQDVPGFT*SFSLCDSAHTEARS Trigger: TGACCTTGCTTCTGTATGTGCTGAGTCACAAAGTGAAAAAGACCATGTAAAGCCTGGCACATCCTGTATTGAGGGAACATGCTGGGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR TCA 90 bp | CTCAATACAGGATGTGCCAGGCTTTACATGGTCTTTTTCACTTTGTaGCTCAGCACATACAGAAGCAAGGTCATTACTCACCCAACAGGG | + |
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Preference number: 1 (lower is better) Translates to: LNTGCARLYMVFFTL*LSTYRSKVITHPTG Trigger: CCCTGTTGGGTGAGTAATGACCTTGCTTCTGTATGTGCTGAGTCACAAAGTGAAAAAGACCATGTAAAGCCTGGCACATCCTGTATTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR CCA 90 bp | GGTCTTGTTTCACTTAAATCCTTCCCTGTCATTTCTTTTTCCTGTTaGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: GLVSLKSFPVISFSC*NEDAYSVQYCISEV Trigger: TACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACAGGAAAAAGAAATGACAGGGAAGGATTTAAGTGAAACAAGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGGAGAAGGGGCCTGGCCGGGCCCAGTAATCCAATGCTCGAACTCGGTAGGAGTGCACGGAGCCGGCTaGCCTGCCCAGGTGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VGEGAWPGPVIQCSNSVGVHGAG*PAQVAS Trigger: TGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCAC...TCCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGGGGCCTGGCCGGGCCCAGTAATCCAATGCTCGAACTCGGTAGGAGCTTGAACAGCTGGGCATaGGGAGGAAGGTGGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RRRGLAGPSNPMLELGRSLNSWA*GGRWAK Trigger: CTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAA...GCTCCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCAAGGTTGTGGCAGGGACCAGCCCACCAGAGGGTCTGCCTCGTCATTGTGGCGATGGAGCTACCTaGACCCTTCTTGTGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSKVVAGTSPPEGLPRHCGDGAT*TLLVQG Trigger: TCCCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCC...ACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGTGGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGTAAGATCCTGAACACAAGTCCCTaGGCCTGCACAGCAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: PLWVGAHPLAGDPGMCKILNTSP*ACTAST Trigger: AGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAG...GATCTTACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
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| 3UTR CAA 90 bp | GACCTTCACCACCAGGGCCGCATAAGTCACATCAGCTCTCCAAGGTaGTGGCAGGGACCAGCCCACCAGAGGGTCTGCCTCGTCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: DLHHQGRISHISSPR*WQGPAHQRVCLVIV Trigger: TACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCTGATGTGACTTATGCGGCCCTGGTGGTGAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGTGCACGGAGCCGGCTaGCCTGCCCAGGTGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKVHGAG*PAQVAS Trigger: TGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCAC...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCGCTCCAGCACATTGGTaGCCTTGGCAGGGGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIAPAHW*PWQGVE Trigger: TTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGC...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCGTCGGAGAAGGGGCCTaGCCGGGCCCAGTAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PFWENWISYVHRHLEPTRVGEGA*PGPVIQ Trigger: TTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC...GCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CAA 90 bp | GCCTGTTTTCTTAAACTAGTGATTGATGTGGGAGGGTCCAGACCGTaGTGGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: ACFLKLVIDVGGSRP*WVGAHPLAGDPGMC Trigger: ACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGGTCTGGACCCTCCCACATCAATCACTAGTTTAAGAAAACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCCTTCCTGCCTCCAGGTaGCTGCCTGACTGCCTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: EMATPQTQTVQHITGSWALPASR*LPDCLR Trigger: TCGAAGGCAGTCAGGCAGGCACCTGGAGGCAGGAAG...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCACATGGGCCCCGATGCTaGGAATGGAGCTGCAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: RLEMATPQTQTVQHITGSHGPRC*EWSCRI Trigger: AATCCTGCAGCTCCATTCTCAGCATCGGGGCCCATG...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCATGTGTCAGGGGCAGCATGGGGAGGAAGGTaGGCAAAGGTCACTCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: SPHAHLTRPKSAVHVSGAAWGGR*AKVTPT Trigger: AGTTGGAGTGACCTTTGCCCACCTTCCTCCCCATGC...TGCCCCTGACACATGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCACTGAACACAAGTCCCTaGGCCTGCACAGCAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: HRHLEPTRSSDQTKISCPLNTSP*ACTAST Trigger: AGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAG...TGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: WACTASTLSTEPSFQSHIADLPR*LQGACA Trigger: TGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGC...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | CATATGTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGACCTTGGCAGGGGGTaGAAGGAATCCCCAGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: HMSTGTWSPHAHLTRPKSDLGRG*KESPGP Trigger: TGGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTC...TGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGAGCCAGTGGCTCTCATaGGGCAGGGACATCCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LEMATPQTQTVQHITGSWSQWLS*GRDIQV Trigger: TACCTGGATGTCCCTGCCTCATGAGAGCCACTGGCT...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: VHRHLEPTRSSDQTKISCQVLVL*NDLHHQ Trigger: CTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTG...ACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGTCACAGGGATACTGTaGTTGGGGTGTGCGTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LEMATPQTQTVQHITGSWVTGIL*LGCAWV Trigger: CACCCACGCACACCCCAACCACAGTATCCCTGTGAC...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACGGGTGGTAGCTCAGGAAGGCATTGTCATTGCTGAGGAGCACATAGCGCATTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VRVVAQEGIVIAEEHIAHCTWGG*VLLTWN Trigger: ATTCCAGGTCAACAATACTCACCCACCCCACGTGCA...ATGCGCTATGTGCTCCTCAGCAATGACAATGCCTTCCTGAGCTACCACCCGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PFWENWISYVHRHLEPTRCTWGG*VLLTWN Trigger: ATTCCAGGTCAACAATACTCACCCACCCCACGTGCA...GCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIANSRF*CCAMTF Trigger: GAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGC...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CAA 90 bp | TCTCATACAGCCCACCCAACAGGGTCTGGAAAAACGCTGCCTACCTaGTGTGGTCATGGACACGTTGTCAAAGTCATGGTGGTCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SHTAHPTGSGKTLPT*CGHGHVVKVMVVWF Trigger: GAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGGTGGGCTGTATGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AKVTPTGPIKCLATKTDPAHTLI*PDQNQL Trigger: CAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGC...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAAGGGCAGGAGGGTCTTaGGGGTCTGGGATTGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPRAGGS*GSGIVL Trigger: CAGGACAATCCCAGACCCTCAAGACCCTCCTGCCCT...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTACTGGGCCTATAAAGTaGTTAGCCACAAAGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: WSLQFQVDWKAREPWPVSTGPIK*LATKTD Trigger: GTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGT...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR GCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCACTTCCTGCCTCCAGGTaGCTGCCTGACTGCCTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPLPASR*LPDCLR Trigger: TCGAAGGCAGTCAGGCAGGCACCTGGAGGCAGGAAG...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGTTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTGGATCTCATATATGTGTCAGGGGCAGTaGACGGAGCCGGCTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLIGAYSSPFWENWISYMCQGQ*TEPADL Trigger: CAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACAT...ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTCTGAACACAAGTCCCTaGGCCTGCACAGCAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: WACTASTLSTEPSFQSHILNTSP*ACTAST Trigger: AGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAG...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGACAGTTTCAGGTAGACTaGAAGGCCAGGGAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EVNASLPRCFCSFIAVYRQFQVD*KAREPW Trigger: CCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTG...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCACTAGGAGAAAGGTCATaGCGGCTGGAAATGGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: RLEMATPQTQTVQHITGSLGERS*RLEMAT Trigger: TGTTGCCATTTCCAGCCGCCATGACCTTTCTCCTAG...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCTCCAGGTGCCTGCCTaGCTGCCTTCGATGATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLPRCFCSFIAVYRINRKLQVPA*LPSMID Trigger: GTCTATCATCGAAGGCAGTCAGGCAGGCACCTGGAG...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGAACTTTTTGAACAGCTaGGCATGGGGAGGAAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LEMATPQTQTVQHITGSWNFLNS*AWGGRW Trigger: CCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTT...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTCATGGCGGCTGGAAATaGCAACACCACAGACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: AKVTPTGPIKCLATKTDPHGGWK*QHHRHR Trigger: TCTGTGTCTGTGGTGTTGCCATTTCCAGCCGCCATG...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGACATGGCGGCTGGAAATaGCAACACCACAGACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: EVNASLPRCFCSFIAVYRHGGWK*QHHRHR Trigger: TCTGTGTCTGTGGTGTTGCCATTTCCAGCCGCCATG...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAACATGGCGGCTGGAAATaGCAACACCACAGACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKHGGWK*QHHRHR Trigger: TCTGTGTCTGTGGTGTTGCCATTTCCAGCCGCCATG...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CATATGTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HMSTGTWSPHAHLTRPKSANSRF*CCAMTF Trigger: GAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGC...TGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGCAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQQLHVG*VSIVDL Trigger: CAGGTCAACAATACTCACCCACCCCACGTGCAGTTG...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| 3UTR CAA 90 bp | TCTTCACCTTTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTaGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSPFWENWISYVHRH*EPTRSSDQTKISCP Trigger: TGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGATCTGGTGCTGTGCAATaGCCTTCACCACCAGGGCCG | + |
|
Preference number: 2 (lower is better) Translates to: LATKTDPKSEVEKDTLKGSGAVQ*PSPPGP Trigger: CGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGA...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCACTGGGCCTATAAAGTaGTTAGCCACAAAGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PFWENWISYVHRHLEPTRTGPIK*LATKTD Trigger: GTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGT...GCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGATGTGTCAGGGGCAGTaGACGGAGCCGGCTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVYQALYLIFLKQMCQGQ*TEPADL Trigger: CAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACAT...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGGCATGGGGAGGAAGGTaGGCAAAGGTCACTCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: SLPRCFCSFIAVYRINRKAWGGR*AKVTPT Trigger: AGTTGGAGTGACCTTTGCCCACCTTCCTCCCCATGC...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCATTGAACAGCTGGGCATaGGGAGGAAGGTGGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPLNSWA*GGRWAK Trigger: CTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAA...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCAGTTTCAGGTAGACTaGAAGGCCAGGGAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLPRCFCSFIAVYRINRKQFQVD*KAREPW Trigger: CCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTG...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GIQVKSTLPYPDASAHSSQLHVG*VSIVDL Trigger: CAGGTCAACAATACTCACCCACCCCACGTGCAGTTG...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVPSTLLDFSKADLPR*LQGACA Trigger: TGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGC...TTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CAA 90 bp | CAGGGTCTGGAAAAACGCTGCCTACCTTGTGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCTGGTTCATTCCAAGTCTCAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QGLEKRCLPCVVMDT*SKSWWSGSFQVSKF Trigger: GAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAAACTTTTTGAACAGCTaGGCATGGGGAGGAAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KSTLPYPDASAHSSRFIENFLNS*AWGGRW Trigger: CCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTT...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCACATGGCGGCTGGAAATaGCAACACCACAGACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPHGGWK*QHHRHR Trigger: TCTGTGTCTGTGGTGTTGCCATTTCCAGCCGCCATG...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTAACAGGGTTTCTTACTaGACCTGGAGCTTGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: WACTASTLSTEPSFQSHINRVSY*TWSLQF Trigger: AAACTGCAAGCTCCAGGTTCAGTAAGAAACCCTGTT...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCTTTTTCCTGTTGGAATaGAGATGCTTACTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EMATPQTQTVQHITGSWAFFLLE*RCLLCA Trigger: TGCACAGAGTAAGCATCTTCATTCCAACAGGAAAAA...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGAGAAGGAACCTCAATTaGGAAAAATGCCCCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: LEMATPQTQTVQHITGSWRRNLN*EKCPNK Trigger: CTTGTTGGGGCATTTTTCTCAATTGAGGTTCCTTCT...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTACAGTTTCAGGTAGACTaGAAGGCCAGGGAACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVYQALYLIFLQFQVD*KAREPW Trigger: CCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTG...TAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCATACTCTTCACCTTTCTaGGAAAACTGGATCTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: HRHLEPTRSSDQTKISCPYSSPF*ENWISY Trigger: ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTA...TGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCACGTTTGTCTTGCTATaGTTTGGTCTTGTTTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: EMATPQTQTVQHITGSWATFVLL*FGLVSL Trigger: AAGTGAAACAAGACCAAAGCATAGCAAGACAAACGT...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGAACACAAGTCCCTaGGCCTGCACAGCAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVLNTSP*ACTAST Trigger: AGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAG...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCAGTGGCAAGATTGGGGTaGCTTTATTTCAGTTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: RLEMATPQTQTVQHITGSVARLG*LYFSLL Trigger: TAATAAACTGAAATAAAGCCACCCCAATCTTGCCAC...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR CAA 90 bp | TGGGCCCCGATGCTGAGAATGGAGCTGCAGGATTTAACGTTTGTCTaGCTATGCTTTGGTCTTGTTTCACTTAAATCCTTCCCTGTCATT | + |
|
Preference number: 2 (lower is better) Translates to: WAPMLRMELQDLTFV*LCFGLVSLKSFPVI Trigger: AATGACAGGGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCAAGACAAACGTTAAATCCTGCAGCTCCATTCTCAGCATCGGGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTTCTCTGGTGCTGTGCAATaGCCTTCACCACCAGGGCCG | + |
|
Preference number: 2 (lower is better) Translates to: WNEDAYSVQYCISEVHNFSGAVQ*PSPPGP Trigger: CGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGA...GAAGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VGMKMLTLCSIVFQKYITVPLAQ*PRRLQH Trigger: GTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAAC...AGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTCAACGTTTGTCTTGCTATaGTTTGGTCTTGTTTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: FWENWISYVHRHLEPTRSTFVLL*FGLVSL Trigger: AAGTGAAACAAGACCAAAGCATAGCAAGACAAACGT...TGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVQVLVL*NDLHHQ Trigger: CTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTG...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGAACTTTTTGAACAGCTaGGCATGGGGAGGAAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLATKTDPKSEVEKDTLKNFLNS*AWGGRW Trigger: CCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTT...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCATACCTTGTGTGGTCATaGACACGTTGTCAAAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPYLVWS*TRCQSH Trigger: ATGACTTTGACAACGTGTCCATGACCACACAAGGTA...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTaGATTTTTCTAAAACAGGGTTTCTTACTGAACCTGGAGCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCVCVYQALY*IFLKQGFLLNLELA Trigger: TGCAAGCTCCAGGTTCAGTAAGAAACCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACACACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCATTTTTCCTGTTGGAATaGAGATGCTTACTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPFFLLE*RCLLCA Trigger: TGCACAGAGTAAGCATCTTCATTCCAACAGGAAAAA...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CWNEDAYSVQYCISEVHNAHTLI*PDQNQL Trigger: CAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGC...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAACGTTTGTCTTGCTATaGTTTGGTCTTGTTTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: KSTLPYPDASAHSSRFIETFVLL*FGLVSL Trigger: AAGTGAAACAAGACCAAAGCATAGCAAGACAAACGT...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGACGTTTGTCTTGCTATaGTTTGGTCTTGTTTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: GIQVKSTLPYPDASAHSSTFVLL*FGLVSL Trigger: AAGTGAAACAAGACCAAAGCATAGCAAGACAAACGT...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGTTGAACAGCTGGGCATaGGGAGGAAGGTGGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFSLLQARVIWEEGTSIELNSWA*GGRWAK Trigger: CTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAA...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCACAAGCTAGAGTCATTTaGGAAGAAGGAACCTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: YPDASAHSSRFIESIGSPQARVI*EEGTSI Trigger: AATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTG...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGAGGGTCTTGAGGGTCTaGGATTGTCCTGCTTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: YFSLLQARVIWEEGTSIERVLRV*DCPASL Trigger: GAGGGAAGCAGGACAATCCCAGACCCTCAAGACCCT...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGACTGGGCCTATAAAGTaGTTAGCCACAAAGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVYQALYLIFLKQTGPIK*LATKTD Trigger: GTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGT...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: IKCLATKTDPKSEVEKDTLSKSW*SGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAA...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGACTGGGCCTATAAAGTaGTTAGCCACAAAGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ALYLLSHLSSPTFKLFEQTGPIK*LATKTD Trigger: GTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGT...CTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAGTGGCAAGATTGGGGTaGCTTTATTTCAGTTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVYQALYLIFLVARLG*LYFSLL Trigger: TAATAAACTGAAATAAAGCCACCCCAATCTTGCCAC...TAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACAACAGGGTTTCTTACTaGACCTGGAGCTTGCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CWNEDAYSVQYCISEVHNNRVSY*TWSLQF Trigger: AAACTGCAAGCTCCAGGTTCAGTAAGAAACCCTGTT...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGAAGATGCTTACTCTGTaGAGTATTGTATTTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFSLLQARVIWEEGTSIEKMLTL*SIVFQK Trigger: CTTCTGAAATACAATACTGCACAGAGTAAGCATCTT...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CAGGGGCAGTGCACGGAGCCGGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCATACATGCACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGQCTEPADLPR*LQGACAYMHQQ Trigger: CTGCTGGTGCATGTATGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCACTGCCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | CCATGTGTCAGGGGCAGTGCACGGAGCCGGCTGACCTaGCCAGGTGGCTTCAAGGGGCGTGTGCATACATGC | + |
|
Preference number: 3 (lower is better) Translates to: PCVRGSARSRLT*PGGFKGRVHTC Trigger: GCATGTATGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | GTCGGAGAAGGGGCCTGGCCGGGCCCAGTAATCCAATaGTCGAACTCGGTAGGAGCCAGAGACCACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VGEGAWPGPVIQ*SNSVGARDHSC Trigger: ACAGCTGTGGTCTCTGGCTCCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CAGGGCCGCATAAGTCACATCAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAGAGGGTCTGCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: QGRISHISSPRL*QGPAHQRVCLV Trigger: GACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCTGATGTGACTTATGCGGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | ATTGGCACAGTGACCCAGGAGGCTCCAGCACATTGGTaGCCTTGGCAGGGGGTGGAAGGAATCCCCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: IGTVTQEAPAHW*PWQGVEGIPRT Trigger: GGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCCTGGGTCACTGTGCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | TACTCCAGGCCGCTGCGGAGCCTTCAGGGTGATGGGTaGTGGCCAGGACACCCACTGTATGATTGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YSRPLRSLQGDG*WPGHPLYDCCP Trigger: TGGACAGCAATCATACAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGCAGCGGCCTGGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | GGTGGAAGGAATCCCCAGGACCACCCAACTTCAAAGTaGGGCTGGCAATGCGCAGCCCCTCAGAGCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GGRNPQDHPTSK*GWQCAAPQSRH Trigger: ATGCCTGCTCTGAGGGGCTGCGCATTGCCAGCCCCACTTTGAAGTTGGGTGGTCCTGGGGATTCCTTCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TCCAGGCCGCTGCGGAGCCTTCAGGGTGATGGGTGCTaGCCAGGACACCCACTGTATGATTGCTGTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SRPLRSLQGDGC*PGHPLYDCCPT Trigger: TGTTGGACAGCAATCATACAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGCAGCGGCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | AGTCTGAGTAAGCAGCACCCCTCCATGGCCTCTCCATaGCTTCCTGCCTCCAGGTGCCTGCCTGACTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSKQHPSMASP*LPASRCLPDCL Trigger: AAGGCAGTCAGGCAGGCACCTGGAGGCAGGAAGTCATGGAGAGGCCATGGAGGGGTGCTGCTTACTCAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | AAGAGCTGCTGGACCTGCTCCACAACTGCCATCTCCTaGTCCAGGATGGCGATGGAGCTACCTGCACCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSCWTCSTTAIS*SRMAMELPAPF Trigger: GAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGATGGCAGTTGTGGAGCAGGTCCAGCAGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | GAACTCAGGGAAGAGCTGCTGGACCTGCTCCACAACTaGCATCTCCTGCTCCAGGATGGCGATGGAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: ELREELLDLLHN*HLLLQDGDGAT Trigger: GGTAGCTCCATCGCCATCCTGGAGCAGGAGATGGCAGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TCCCAACAGGGCCATGAGCCCCATGACTGTGAGTACTaGCTTTCGCAGCAACTGCACGTGGGGTGGGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQQGHEPHDCEY*LSQQLHVGWVS Trigger: ACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACAGTCATGGGGCTCATGGCCCTGTTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| 3UTR CCA 72 bp | ACCCAACAGGGCCATGAGCCCCATGACTGTGAGTACTaGCTTTCGCAGCAACTGCACGTGGGGTGGGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQQGHEPHDCEY*LSQQLHVGWVS Trigger: ACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACAGTCATGGGGCTCATGGCCCTGTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | GGTGATGGGTGCTGGCCAGGACACCCACTGTATGATTaGTGTCCAACACAGCCCCAGCCTTTGAGACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GDGCWPGHPLYD*CPTQPQPLRPL Trigger: CAGAGGTCTCAAAGGCTGGGGCTGTGTTGGACAGCAATCATACAGTGGGTGTCCTGGCCAGCACCCATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CGCATGGAGGAACTGCTGTTGGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTCACCACCAGGGCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: RMEELLLANSRF*CCAMTFTTRAA Trigger: TGCGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCATGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCGGAAGCTTCCGGTGTAGGGTCAGGCGGCCCCTAGCAGGAAAGGGGCGTAAGAAGGAACCTCAATaGAGAAAAATGCCCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGSFRCRVRRPLAGKGRKKEPQ*RKMPQQ Trigger: TTGTTGGGGCATTTTTCTCAATTGAGGTTCCTTCTT...ACGCCCCTTTCCTGCTAGGGGCCGCCTGACCCTACACCGGAAGCTTCCGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | GGTACGGGTGGTAGCTCAGGAAGGCATTGTCATTGCTaGGGAGCACATAGCGCATGGAGGAACTGCTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTGGSSGRHCHC*GAHSAWRNCCW Trigger: CCAACAGCAGTTCCTCCATGCGCTATGTGCTCCTCAGCAATGACAATGCCTTCCTGAGCTACCACCCGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | CCAAGGTTGTGGCAGGGACCAGCCCACCAGAGGGTCTaGCTCGTCATTGTAAATAGGGGTATCCTTGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: PRLWQGPAHQRV*LVIVNRGILEL Trigger: GAGTTCAAGGATACCCCTATTTACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | GGAACTGCTGTTGGCAAACAGCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAGGGCCGCATAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTAVGKQQVLVL*NDLHHQGRISH Trigger: GTGACTTATGCGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGCCAACAGCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CCTGCTTCCCTCTCATACAGCCCACCCAACAGGGTCTaGAAAAACGCTGCCTACCTTGTGTGGTCATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PASLSYSPPNRV*KNAAYLVWSWT Trigger: TGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGGTGGGCTGTATGAGAGGGAAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | ATATGTCCACAGGCACTTGGAGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTGTCCATGTGTCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ICPQALGAHTLI*PDQNQLSMCQG Trigger: CCCCTGACACATGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CCACAGACACAGACTGTCCAGCACATCACAGGATCATaGGCCCCGATGCTGAGAATGGAGCTGCAGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: PQTQTVQHITGS*APMLRMELQDL Trigger: TAAATCCTGCAGCTCCATTCTCAGCATCGGGGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTCCATGTGTCAGGGGCAAAAACGCTGCCTACCTaGTGTGGTCATGGACACGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPHAHLTRPKSAVHVSGAKTLPT*CGHGHV Trigger: AACGTGTCCATGACCACACAAGGTAGGCAGCGTTTT...TGCCCCTGACACATGGACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | AGTACTGGCTTTCGCAGCAACTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAATCGAGCAGTAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: STGFRSNCTWGG*VLLTWNRAVSV Trigger: CACACTTACTGCTCGATTCCAGGTCAACAATACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TGTGAGTACTGGCTTTCGCAGCAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTGGAATCGAGCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CEYWLSQQLHVG*VSIVDLESSSK Trigger: CTTACTGCTCGATTCCAGGTCAACAATACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CCCAACAGGGTCTGGAAAAACGCTGCCTACCTTGTGTaGTCATGGACACGTTGTCAAAGTCATGGTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PNRVWKNAAYLV*SWTRCQSHGGL Trigger: CAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGAGGCTCCAGCACATaGGTGACCTTGGCAGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVGGSST*VTLAGG Trigger: ACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCC...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATGTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGGAGGAAATATGCTTTaGCACCTTCCCAGCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HMSTGTWSPHAHLTRPKSGGNML*HLPSMF Trigger: GAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCC...TGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | AGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTaGTTAGCCACAAAGACTGACCCTAAGTCTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RWAKVTPTGPIK*LATKTDPKSEV Trigger: TACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTaGAGCCCACACGCTCATCTGACCAGACCAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SGKTGSHMSTGT*SPHAHLTRPKS Trigger: TGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | AGGGTCTGGAAAAACGCTGCCTACCTTGTGTGGTCATaGACACGTTGTCAAAGTCATGGTGGTCTGGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RVWKNAAYLVWS*TRCQSHGGLVH Trigger: ATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGATCTAGCTCATACTGGTaGACTCCATTCACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EVNASLPRCFCSFIAVYRSSSYW*TPFTSQ Trigger: CTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGA...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTTCTAGCTCATACTGGTaGACTCCATTCACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AKVTPTGPIKCLATKTDPSSSYW*TPFTSQ Trigger: CTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGA...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCTGCTATGCTTTGGTCTaGTTTCACTTAAATCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AAGNGNTTDTDCPAHHRICYALV*FHLNPS Trigger: GGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCA...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTGCTAGATATCTGAACACAAGTCCCTGGGCCTGCACAGCAAGCACTTTAGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MSARYLNTSPWACTASTLVVMDT*SKSWWS Trigger: AGACCACCATGACTTTGACAACGTGTCCATGACCAC...TAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | AGCTGCCTAGCTAATGGCAGTCTAGCTCATACTGGTTaGCTCCATTCACCAGTCAGCACAGATTCACAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLANGSLAHTG*LHSPVSTDSQV Trigger: GACTTGTGAATCTGTGCTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGACTGCCATTAGCTAGGCAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | ATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTaGGCATGGGGAGGAAGGTGGGCAAAGGTCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IFPVPHLNFLNS*AWGGRWAKVTP Trigger: TGGAGTGACCTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTaGATCTCATATGTCCACAGGCACTTGGAGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LIGAYSSPFWEN*ISYVHRHLEPT Trigger: TGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGCTATGCTTTGGTCTaGTTTCACTTAAATCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RLEMATPQTQTVQHITGSCYALV*FHLNPS Trigger: GGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCA...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGTTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTGGATCTCATATATGGAGGAACTGCTGTaGGCAAACAGCAGGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLIGAYSSPFWENWISYMEELL*ANSRFW Trigger: CCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCAT...ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTCATGCTATGCTTTGGTCTaGTTTCACTTAAATCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FWENWISYVHRHLEPTRSCYALV*FHLNPS Trigger: GGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCA...TGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGAATGGAGGAACTGCTGTaGGCAAACAGCAGGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LATKTDPKSEVEKDTLKGMEELL*ANSRFW Trigger: CCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCAT...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | CCAGAGTTGTTCTCCATACAGCAGCTGGAGGAAATATaGTTTTGCACCTTCCCAGCATGTTCCCTCAATACA | + |
|
Preference number: 3 (lower is better) Translates to: PELFSIQQLEEI*FCTFPACSLNT Trigger: TGTATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAACTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CTATACATGAGTGCTAGATATCTGAACACAAGTCCCTaGGCCTGCACAGCAAGCACTTTATCTACTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LYMSARYLNTSP*ACTASTLSTEP Trigger: TGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCATGTATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTCATACCAAGCACTCTACTaGATTTTTCTAAAACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FWENWISYVHRHLEPTRSYQALY*IFLKQG Trigger: ACCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTA...TGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR TCA 72 bp | AAGTCCCTGGGCCTGCACAGCAAGCACTTTATCTACTaGGCCATCTTTCCAGTCCCACATTTAAACTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KSLGLHSKHFIY*AIFPVPHLNFL Trigger: CAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCAGGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | ACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTaGTCATTCATCGCGGTTTATCGAATCAATAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSEVNASLPRCF*SFIAVYRINRK Trigger: CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR GCA 72 bp | TTGTTCTCCATACAGCAGCTGGAGGAAATATGCTTTTaGACCTTCCCAGCATGTTCCCTCAATACAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LFSIQQLEEICF*TFPACSLNTGC Trigger: ACATCCTGTATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTACCAAGCACTCTACTaGATTTTTCTAAAACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WACTASTLSTEPSFQSHIYQALY*IFLKQG Trigger: ACCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTA...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAATCTAGCTCATACTGGTaGACTCCATTCACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVPSTLLDFSKSSSYW*TPFTSQ Trigger: CTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGA...TTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTAGCTCATACTGGTaGACTCCATTCACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVSSSYW*TPFTSQ Trigger: CTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGA...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTGTACCAAGCACTCTACTaGATTTTTCTAAAACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSPTFKLFEQLGMGRKVYQALY*IFLKQG Trigger: ACCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTA...CACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | CATGTTCCCTCAATACAGGATGTGCCAGGCTTTACATaGTCTTTTTCACTTTGTGACTCAGCACATACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HVPSIQDVPGFT*SFSLCDSAHTE Trigger: TTCTGTATGTGCTGAGTCACAAAGTGAAAAAGACCATGTAAAGCCTGGCACATCCTGTATTGAGGGAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAGATTTAACGTTTGTCTaGCTATGCTTTGGTCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YPDASAHSSRFIESIGSPDLTFV*LCFGLV Trigger: AACAAGACCAAAGCATAGCAAGACAAACGTTAAATC...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTTGCTATGCTTTGGTCTTGTTTCACTTAAATCCTTCCCTGTCATTTCTTTCTAGCTCATACTGGTaGACTCCATTCACCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSCYALVLFHLNPSLSFLSSSYW*TPFTSQ Trigger: CTGACTGGTGAATGGAGTCAACCAGTATGAGCTAGA...AAGAAATGACAGGGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCAAGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| 3UTR CCA 72 bp | TGGCTTTATTTCAGTTTATTACAAGCTAGAGTCATTTaGGAAGAAGGAACCTCAATTGAGAAAAATGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WLYFSLLQARVI*EEGTSIEKNAP Trigger: TGGGGCATTTTTCTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATAAAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | GGTCGGAGAAGGGGCCTGGCCGGGCCCAGTAATCCAATGCTCGAACTCGGTAGGGGCGATGGAGCTACCTaGACCCTTCTTGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRRGLAGPSNPMLELGRGDGAT*TLLVQG Trigger: TCCCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCC...CCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| 3UTR CAA 72 bp | CACAGTGACCCAGGAGGCTCCAGCACATTGGTGACCTaGGCAGGGGGTGGAAGGAATCCCCAGGACCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSDPGGSSTLVT*AGGGRNPQDHP Trigger: TGGGTGGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCCTGGGTCACTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTGCGGAGCCTTCAGGGTaGTGGGTGCTGGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSAEPSG*WVLART Trigger: TGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGC...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCGCGGAGCCTTCAGGGTaGTGGGTGCTGGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIAEPSG*WVLART Trigger: TGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGC...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSADLPR*LQGACA Trigger: TGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGC...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| 3UTR CAA 72 bp | GGAAGCCTAGGGCAGGAGGGTCTTGAGGGTCTGGGATaGTCCTGCTTCCCTCTCATACAGCCCACCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGQEGLEGLG*SCFPLIQPTQQ Trigger: CTGTTGGGTGGGCTGTATGAGAGGGAAGCAGGACAATCCCAGACCCTCAAGACCCTCCTGCCCTAGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCGTCGGAGAAGGGGCCTaGCCGGGCCCAGTAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIVGEGA*PGPVIQ Trigger: TTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAACGTCAGCATAGCTaGGGAGGGACGCGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGRWAKVTPTGPIKCLATKRQHS*GGTRGS Trigger: CGACCCCCGCGTCCCTCCTCAGCTATGCTGACGTTT...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGGTGCACGGAGCCGGCTaGCCTGCCCAGGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQVHGAG*PAQVAS Trigger: TGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCAC...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCCTTCAGGGTGATGGGTaGTGGCCAGGACACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGNGNTTDTDCPAHHRILQGDG*WPGHPL Trigger: CAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAG...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCAATGTGTCAGGGGCAGTaGACGGAGCCGGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLEMATPQTQTVQHITGSMCQGQ*TEPADL Trigger: CAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACAT...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHRHLEPTRSSDQTKISCSSPRL*QGPAHQ Trigger: CTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCT...ACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGAAACGTCAGCATAGCTaGGGAGGGACGCGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWKRQHS*GGTRGS Trigger: CGACCCCCGCGTCCCTCCTCAGCTATGCTGACGTTT...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCGCTCCAGCACATTGGTaGCCTTGGCAGGGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMATPQTQTVQHITGSWAAPAHW*PWQGVE Trigger: TTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGC...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGAAGGGGCCTGGCCGGGCCCAGTAATCCAATGCTCGAACTCGGTAGGAGCTCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRRGLAGPSNPMLELGRSSQSST*KRVSAH Trigger: ATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGA...GCTCCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | GTCCACAGGCACTTGGAGCCCACACGCTCATCTGACCAGACCAAAATCAGCTGTTCTCCTGCTCCAGGATaGCGATGGAGCTACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHRHLEPTRSSDQTKISCSPAPG*RWSYLH Trigger: GTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGA...ACAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGCTCCAAGTGCCTGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTCAGGGATACTGTGGTTaGGGTGTGCGTGGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSQGYCG*GVRGCH Trigger: ATGACACCCACGCACACCCCAACCACAGTATCCCTG...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACATGCAGAGGGGAAGACTaGCTGGCCCATGTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRWAKVTPTGPIKCLATCRGED*LAHVLP Trigger: TGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCA...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAAAACGTCAGCATAGCTaGGGAGGGACGCGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKKRQHS*GGTRGS Trigger: CGACCCCCGCGTCCCTCCTCAGCTATGCTGACGTTT...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAGTGCACGGAGCCGGCTaGCCTGCCCAGGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YPDASAHSSRFIESIGSPVHGAG*PAQVAS Trigger: TGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCAC...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTAACTCAGGGAAGAGCTaGTGGACCTGCTCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSNSGKS*WTCSTT Trigger: AGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTT...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAATGTGTCAGGGGCAGTaGACGGAGCCGGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKMCQGQ*TEPADL Trigger: CAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACAT...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCGCTCCAGGATGGCGATaGAGCTACCTGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EMATPQTQTVQHITGSWAAPGWR*SYLHPS Trigger: AGAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGC...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAAAACGTCAGCATAGCTaGGGAGGGACGCGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSTLPYPDASAHSSRFIEKRQHS*GGTRGS Trigger: CGACCCCCGCGTCCCTCCTCAGCTATGCTGACGTTT...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCCAGAAGGACTGCCCATaGGCTCAAATCCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIQKDCP*AQIQGE Trigger: TTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTG...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACGCTCCAGCACATTGGTaGCCTTGGCAGGGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVGKGHSNWAYKVLSHKDAPAHW*PWQGVE Trigger: TTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGC...GTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQVPLAQ*PRRLQH Trigger: GTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAAC...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKVTPTGPIKCLATKTDPVPLAQ*PRRLQH Trigger: GTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAAC...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVGKGHSNWAYKVLSHKDVPLAQ*PRRLQH Trigger: GTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAAC...GTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGCGCCCACCTCGCCAGTaGAGAAGTTGGTTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWRPPRQ*RSWFHW Trigger: CCAATGGAACCAACTTCTTCACTGGCGAGGTGGGCG...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTGTGGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGTAAGATCTTCCATTCAAACACCTaGTGCTTGTCATCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLWVGAHPLAGDPGMCKIFHSNT*CLSSKS Trigger: GGACTTTGATGACAAGCAGCAGGTGTTTGAATGGAA...GATCTTACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGGCGATGGAGCTACCTaGACCCTTCTTGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWGDGAT*TLLVQG Trigger: TCCCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCC...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAACTTCAGGGTGATGGGTaGTGGCCAGGACACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKLQGDG*WPGHPL Trigger: CAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAG...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGACTTCAGGGTGATGGGTaGTGGCCAGGACACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRLQGDG*WPGHPL Trigger: CAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAG...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGTCTCCTGCTCCAGGATaGCGATGGAGCTACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWSPAPG*RWSYLH Trigger: GTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGA...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSANSRF*CCAMTF Trigger: GAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGC...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACACAGGGATACTGTGGTTaGGGTGTGCGTGGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGRWAKVTPTGPIKCLATQGYCG*GVRGCH Trigger: ATGACACCCACGCACACCCCAACCACAGTATCCCTG...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPVSVPSTNTRTIGIYCHADLPR*LQGACA Trigger: TGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGC...ATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| 3UTR CAA 72 bp | GCCCACCCAACAGGGTCTGGAAAAACGCTGCCTACCTaGTGTGGTCATGGACACGTTGTCAAAGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHPTGSGKTLPT*CGHGHVVKVMV Trigger: CACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTCCAGACCCTGTTGGGTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCCAGAAGGACTGCCCATaGGCTCAAATCCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMATPQTQTVQHITGSWAQKDCP*AQIQGE Trigger: TTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTG...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGCTAGATATCTGAACACAAGTCCCTGGGCCTGCACAGCAAGCACTTTAGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MSARYLNTSPWACTASTLVPLAQ*PRRLQH Trigger: GTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAAC...TAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTGTCTGGTGCTGTGCAATaGCCTTCACCACCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTFKLFEQLGMGRKVSGAVQ*PSPPGP Trigger: CGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGA...CACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGAAGTGGGGCTGGCAATaGGCAGCCCCTCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKKWGWQ*AAPQSR Trigger: CCTGCTCTGAGGGGCTGCGCATTGCCAGCCCCACTT...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAGGCGATGGAGCTACCTaGACCCTTCTTGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRGDGAT*TLLVQG Trigger: TCCCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCC...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGGCGATGGAGCTACCTaGACCCTTCTTGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKGDGAT*TLLVQG Trigger: TCCCTGCACAAGAAGGGTGCAGGTAGCTCCATCGCC...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMATPQTQTVQHITGSWAQVLVL*NDLHHQ Trigger: CTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTG...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTACTTCAAAGTGGGGCTaGCAATGCGCAGCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WACTASTLSTEPSFQSHITSKWG*QCAAPQ Trigger: CTGAGGGGCTGCGCATTGCCAGCCCCACTTTGAAGT...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGGACCTTGGCAGGGGGTaGAAGGAATCCCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQVKSTLPYPDASAHSSDLGRG*KESPGP Trigger: TGGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTC...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGACCTTGGCAGGGGGTaGAAGGAATCCCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: WPVSVPSTNTRTIGIYCHDLGRG*KESPGP Trigger: TGGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTC...ATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTGCTCCAGGATGGCGATaGAGCTACCTGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKVTPTGPIKCLATKTDPAPGWR*SYLHPS Trigger: AGAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGC...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCACAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLEMATPQTQTVQHITGSQLHVG*VSIVDL Trigger: CAGGTCAACAATACTCACCCACCCCACGTGCAGTTG...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGGCTGACCTGCCCAGGTaGCTTCAAGGGGCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKADLPR*LQGACA Trigger: TGCACACGCCCCTTGAAGCCACCTGGGCAGGTCAGC...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGAAAACTGGATCTCATATGTCCACAGGCACTTGGAGCCCACACGCTCACAGAAGGACTGCCCATaGGCTCAAATCCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FWENWISYVHRHLEPTRSQKDCP*AQIQGE Trigger: TTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTG...TGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAAAGTCCCTGCCCAGGTaGCTTCCAGAAGCCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPDASAHSSRFIESIGSPKSLPR*LPEAGA Trigger: AGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTT...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGGCTCCAGCACATTGGTaGCCTTGTGTGGTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQAPAHW*PCVVMD Trigger: GTCCATGACCACACAAGGTCACCAATGTGCTGGAGC...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCTTGTACATAAGTCCCTaGCCAGGTGACTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMATPQTQTVQHITGSWALYISP*PGDFLA Trigger: AGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAA...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGAACTCAGGGAAGAGCTaGTGGACCTGCTCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWNSGKS*WTCSTT Trigger: AGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTT...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTTACTGAACCTGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACTGTGGTTGGGGTGTaGGTGGGTGTCATCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLNLELAVSGRLEGQGTVVGV*VGVITS Trigger: ACTAGTGATGACACCCACGCACACCCCAACCACAGT...TCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCAGGTTCAGTAAGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGAAGGAAAGGGGCGTGGTaGCTCAGCCACGGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGRKGAW*LSHGVL Trigger: GAGGACCCCGTGGCTGAGGCACCACGCCCCTTTCCT...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGGCCCAGTAATCCAATaGTCGAACTCGGTAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKGPVIQ*SNSVGA Trigger: GGCTCCTACCGAGTTCGAGCATTGGATTACTGGGCC...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCTCCTGCTCCAGGATaGCGATGGAGCTACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTLPYPDASAHSSRFIESPAPG*RWSYLH Trigger: GTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGA...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR CCA 90 bp | CTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTGTCTCCTGCTCCAGGATaGCGATGGAGCTACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTFKLFEQLGMGRKVSPAPG*RWSYLH Trigger: GTGCAGGTAGCTCCATCGCCATCCTGGAGCAGGAGA...CACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR CCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKSSPRL*QGPAHQ Trigger: CTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCT...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTACTGAACCTGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGACAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLLNLELAVSGRLEGQGQLHVG*VSIVDL Trigger: CAGGTCAACAATACTCACCCACCCCACGTGCAGTTG...TCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCAGGTTCAGTAAGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGACAGGGATACTGTGGTTaGGGTGTGCGTGGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRQGYCG*GVRGCH Trigger: ATGACACCCACGCACACCCCAACCACAGTATCCCTG...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CCA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGGTCACAGGGATACTGTaGTTGGGGTGTGCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQVKSTLPYPDASAHSSVTGIL*LGCAWV Trigger: CACCCACGCACACCCCAACCACAGTATCCCTGTGAC...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CCA 90 bp | CCGTTGTGGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGTAAGATCTACTCTTCACCTTTCTaGGAAAACTGGATCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: PLWVGAHPLAGDPGMCKIYSSPF*ENWISY Trigger: ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTA...GATCTTACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAGACCACAGCTGTGTCTaGGCTGAACACAAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGRWAKVTPTGPIKCLATDHSCV*AEHKEV Trigger: AACCTCTTTGTGTTCAGCCCAGACACAGCTGTGGTC...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKVTPTGPIKCLATKTDPCTWGG*VLLTWN Trigger: ATTCCAGGTCAACAATACTCACCCACCCCACGTGCA...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR GCA 90 bp | GGTTTCTTACTGAACCTGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGATTGTACATAAGTCCCTaGCCAGGTGACTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLNLELAVSGRLEGQGLYISP*PGDFLA Trigger: AGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAA...TCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCAGGTTCAGTAAGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS-3UTR GCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAACTCAGGGAAGAGCTaGTGGACCTGCTCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRNSGKS*WTCSTT Trigger: AGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTT...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTATGTGTCAGGGGCAGTaGACGGAGCCGGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKCLATKTDPKSEVEKDTMCQGQ*TEPADL Trigger: CAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACAT...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTTTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSLSKSW*SGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAA...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR TCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKAHTLI*PDQNQL Trigger: CAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGC...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTACGGGTGGTAGCTCAGGAAGGCATTGTCATTGCTGAGGAGCACATAGCGCATCATTCAAACACCTGCTaGTTGTCATCAAAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVVAQEGIVIAEEHIAHHSNTC*LSSKSV Trigger: CACGGACTTTGATGACAAGCAGCAGGTGTTTGAATG...ATGCGCTATGTGCTCCTCAGCAATGACAATGCCTTCCTGAGCTACCACCCGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTGGGGCTGGCAATaGGCAGCCCCTCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVKWGWQ*AAPQSR Trigger: CCTGCTCTGAGGGGCTGCGCATTGCCAGCCCCACTT...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCGCATACGTCGGAACTaGTCTGCAGAGGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKRIRRN*SAEGKT Trigger: AGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCG...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAGACCTTGGCAGGGGGTaGAAGGAATCCCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVYQALYLIFLDLGRG*KESPGP Trigger: TGGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTC...TAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVYQALYLIFLSSPRL*QGPAHQ Trigger: CTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCT...TAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATCAACTGCACGTGGGGTaGGTGAGTATTGTTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPVSVPSTNTRTIGIYCHQLHVG*VSIVDL Trigger: CAGGTCAACAATACTCACCCACCCCACGTGCAGTTG...ATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCAGACCTTGTGTGGTCATaGACACGTTGTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLEMATPQTQTVQHITGSDLVWS*TRCQSH Trigger: ATGACTTTGACAACGTGTCCATGACCACACAAGGTC...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGAAGCTGGTTCTCCATaGGAAGGTCCAAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKEAGSP*EGPRMH Trigger: ATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTC...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGCGCCCACCTCGCCAGTaGAGAAGTTGGTTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKRPPRQ*RSWFHW Trigger: CCAATGGAACCAACTTCTTCACTGGCGAGGTGGGCG...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKCTWGG*VLLTWN Trigger: ATTCCAGGTCAACAATACTCACCCACCCCACGTGCA...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTGTGCACGGAGCCGGCTaGCCTGCCCAGGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGMKMLTLCSIVFQKYITVHGAG*PAQVAS Trigger: TGAAGCCACCTGGGCAGGTCAGCCGGCTCCGTGCAC...AGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAAAGACACTTTAAAGGGAAATAGGGGAAGAACAATAGAAGCTGACAGTAAGTGGGGCTGGCAATaGGCAGCCCCTCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEKDTLKGNRGRTIEADSKWGWQ*AAPQSR Trigger: CCTGCTCTGAGGGGCTGCGCATTGCCAGCCCCACTT...ACTGTCAGCTTCTATTGTTCTTCCCCTATTTCCCTTTAAAGTGTCTTTCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAAACTCAGGGAAGAGCTaGTGGACCTGCTCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: YPDASAHSSRFIESIGSPNSGKS*WTCSTT Trigger: AGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAGTT...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLQFQVDWKAREPWPVSKNASK*VKLYIS Trigger: ACTTATGTACAACTTCACCCACTTGGATGCATTCTT...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTTACTGAACCTGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAAGCCTTGTGTGGTCATaGACACGTTGTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLLNLELAVSGRLEGQGSLVWS*TRCQSH Trigger: ATGACTTTGACAACGTGTCCATGACCACACAAGGCT...TCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCAGGTTCAGTAAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGTCAGGAAGCCTTGTGTaGTCATGGACACGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQSGSLV*SWTRCQ Trigger: TTGACAACGTGTCCATGACCACACAAGGCTTCCTGA...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAATCAGGAAGCCTTGTGTaGTCATGGACACGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKSGSLV*SWTRCQ Trigger: TTGACAACGTGTCCATGACCACACAAGGCTTCCTGA...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGGCTCCAGGATGGCGATaGAGCTACCTGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGAPGWR*SYLHPS Trigger: AGAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGC...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAGGGGAAGACTaGCTGGCCCATGTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVCRGED*LAHVLP Trigger: TGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCA...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGCCTTTCTGGGAAAACTaGATCTCATATGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEMATPQTQTVQHITGSWPFWEN*ISYVHR Trigger: CCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG...CCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTGGACCACAGCTGTGTCTaGGCTGAACACAAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTFKLFEQLGMGRKVDHSCV*AEHKEV Trigger: AACCTCTTTGTGTTCAGCCCAGACACAGCTGTGGTC...CACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| 3UTR CAA 72 bp | GAAAAACGCTGCCTACCTTGTGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKRCLPCVVMDT*SKSWWSGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTAGGCAGCGTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGCGCCCACCTCGCCAGTaGAGAAGTTGGTTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYQALYLIFLKQRPPRQ*RSWFHW Trigger: CCAATGGAACCAACTTCTTCACTGGCGAGGTGGGCG...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR TCA 90 bp | GCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGTCTGGTGCTGTGCAATaGCCTTCACCACCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALYLLSHLSSPTFKLFEQSGAVQ*PSPPGP Trigger: CGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGA...CTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGGCGGAGCCTTCAGGGTaGTGGGTGCTGGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIEAEPSG*WVLART Trigger: TGTCCTGGCCAGCACCCATCACCCTGAAGGCTCCGC...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGAHTLI*PDQNQL Trigger: CAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGC...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGACATTCAAACACCTGCTaGTTGTCATCAAAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRHSNTC*LSSKSV Trigger: CACGGACTTTGATGACAAGCAGCAGGTGTTTGAATG...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGCGCATACGTCGGAACTaGTCTGCAGAGGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKRIRRN*SAEGKT Trigger: AGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCG...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGAGGAAAGGGGCGTGGTaGCTCAGCCACGGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIERKGAW*LSHGVL Trigger: GAGGACCCCGTGGCTGAGGCACCACGCCCCTTTCCT...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTAGGAAAGGGGCGTGGTaGCTCAGCCACGGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGMKMLTLCSIVFQKYITRKGAW*LSHGVL Trigger: GAGGACCCCGTGGCTGAGGCACCACGCCCCTTTCCT...AGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGCCCAGTAATCCAATaGTCGAACTCGGTAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKGPVIQ*SNSVGA Trigger: GGCTCCTACCGAGTTCGAGCATTGGATTACTGGGCC...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATGCCCAGTCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVPSTNTRTIGIYCHAQSQSST*KRVSAH Trigger: ATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGA...CTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAATCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKSQSST*KRVSAH Trigger: ATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGA...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAGCCTTGTGTGGTCATaGACACGTTGTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVNASLPRCFCSFIAVYRSLVWS*TRCQSH Trigger: ATGACTTTGACAACGTGTCCATGACCACACAAGGCT...TCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTCAAAGTGGGGCTaGCAATGCGCAGCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVTSKWG*QCAAPQ Trigger: CTGAGGGGCTGCGCATTGCCAGCCCCACTTTGAAGT...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCCAGGATGGCGATaGAGCTACCTGCACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVAPGWR*SYLHPS Trigger: AGAAGGGTGCAGGTAGCTCCATCGCCATCCTGGAGC...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | GTAGAGAAAGACACTTTAAAGGGAAATAGGGGAAGAACAATAGAAGCTGACAGTAGCTCTCCAAGGTTGTaGCAGGGACCAGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEKDTLKGNRGRTIEADSSSPRL*QGPAHQ Trigger: CTGGTGGGCTGGTCCCTGCCACAACCTTGGAGAGCT...ACTGTCAGCTTCTATTGTTCTTCCCCTATTTCCCTTTAAAGTGTCTTTCTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGTCACAGGGATACTGTaGTTGGGGTGTGCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYQALYLIFLKQVTGIL*LGCAWV Trigger: CACCCACGCACACCCCAACCACAGTATCCCTGTGAC...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACAAACGTCAGCATAGCTaGGGAGGGACGCGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CWNEDAYSVQYCISEVHNKRQHS*GGTRGS Trigger: CGACCCCCGCGTCCCTCCTCAGCTATGCTGACGTTT...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCAGAAGCTGGTTCTCCATaGGAAGGTCCAAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPDASAHSSRFIESIGSPEAGSP*EGPRMH Trigger: ATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTC...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAGCCCACACGCTCATCTaGCCAGACCAAAATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVPSTLLDFSKAHTLI*PDQNQL Trigger: CAGCTGATTTTGGTCTGGTCAGATGAGCGTGTGGGC...TTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTGCTAGATATCTGAACACAAGTCCCTGGGCCTGCACAGCAAGCACTTTAGAGAAGGTCCAAGAATaGATCCAAGTGGGTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSARYLNTSPWACTASTLEKVQE*IQVGEV Trigger: AACTTCACCCACTTGGATGCATTCTTGGACCTTCTC...TAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGACAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGQVLVL*NDLHHQ Trigger: CTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTG...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGCAGGTTCTGGTGCTGTaGAATGACCTTCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGQVLVL*NDLHHQ Trigger: CTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTG...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGACTGTGGTTGGGGTGTaGGTGGGTGTCATCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKTVVGV*VGVITS Trigger: ACTAGTGATGACACCCACGCACACCCCAACCACAGT...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGACTTCAAAGTGGGGCTaGCAATGCGCAGCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALYLLSHLSSPTFKLFEQTSKWG*QCAAPQ Trigger: CTGAGGGGCTGCGCATTGCCAGCCCCACTTTGAAGT...CTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCCTTTCTGGGAAAACTaGATCTCATATGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIQVKSTLPYPDASAHSSPFWEN*ISYVHR Trigger: CCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGGTCGGAGAAGGGGCCTaGCCGGGCCCAGTAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIEVGEGA*PGPVIQ Trigger: TTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACGTCGGAGAAGGGGCCTaGCCGGGCCCAGTAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWNEDAYSVQYCISEVHNVGEGA*PGPVIQ Trigger: TTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGAC...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| 3UTR CAA 72 bp | GTTGTTCTCCATACAGCAGCTGGAGGAAATATGCTTTaGCACCTTCCCAGCATGTTCCCTCAATACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VVLHTAAGGNML*HLPSMFPQYRM Trigger: CATCCTGTATTGAGGGAACATGCTGGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGCAGAAGGACTGCCCATaGGCTCAAATCCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYQALYLIFLKQQKDCP*AQIQGE Trigger: TTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTG...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTTCGCTCCAGCACATTGGTaGCCTTGGCAGGGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WNEDAYSVQYCISEVHNFAPAHW*PWQGVE Trigger: TTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGC...GAAGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGACTGTGGTTGGGGTGTaGGTGGGTGTCATCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYQALYLIFLKQTVVGV*VGVITS Trigger: ACTAGTGATGACACCCACGCACACCCCAACCACAGT...CTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAAAGACACTTTAAAGGGAAATAGGGGAAGAACAATAGAAGCTGACAGTGGCCCAGTAATCCAATaGTCGAACTCGGTAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEKDTLKGNRGRTIEADSGPVIQ*SNSVGA Trigger: GGCTCCTACCGAGTTCGAGCATTGGATTACTGGGCC...ACTGTCAGCTTCTATTGTTCTTCCCCTATTTCCCTTTAAAGTGTCTTTCTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGTACCAATGTATCTCCTaGCCAAGAGAGAAACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCFCSFIAVYRINRKYQCIS*PREKPG Trigger: ACCTGGTTTCTCTCTTGGCCAGGAGATACATTGGTA...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTLPYPDASAHSSRFIELSKSW*SGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAA...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKANSRF*CCAMTF Trigger: GAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGC...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGGCAAACAGCAGGTTCTaGTGCTGTGCAATGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGANSRF*CCAMTF Trigger: GAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGC...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGAGAAGCTGGTTCTCCATaGGAAGGTCCAAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGEAGSP*EGPRMH Trigger: ATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTC...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGGAAGCTGGTTCTCCATaGGAAGGTCCAAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGEAGSP*EGPRMH Trigger: ATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTC...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTTGTTCTCCATACAGCAGCTGGAGGAAATATGCTTTTGCACCTTCCCAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVVLHTAAGGNMLLHLPKNASK*VKLYIS Trigger: ACTTATGTACAACTTCACCCACTTGGATGCATTCTT...GGGAAGGTGCAAAAGCATATTTCCTCCAGCTGCTGTATGGAGAACAACTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTGTCACAGGGATACTGTaGTTGGGGTGTGCGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGMKMLTLCSIVFQKYITVTGIL*LGCAWV Trigger: CACCCACGCACACCCCAACCACAGTATCCCTGTGAC...AGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACCACAGCTGTGTCTaGGCTGAACACAAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVDHSCV*AEHKEV Trigger: AACCTCTTTGTGTTCAGCCCAGACACAGCTGTGGTC...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGTTGTACATAAGTCCCTaGCCAGGTGACTTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALYLLSHLSSPTFKLFEQLYISP*PGDFLA Trigger: AGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAA...CTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTGAGAAGGTCCAAGAATaGATCCAAGTGGGTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKCLATKTDPKSEVEKDTEKVQE*IQVGEV Trigger: AACTTCACCCACTTGGATGCATTCTTGGACCTTCTC...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGACATTCAAACACCTGCTaGTTGTCATCAAAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGHSNTC*LSSKSV Trigger: CACGGACTTTGATGACAAGCAGCAGGTGTTTGAATG...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGCGCATACGTCGGAACTaGTCTGCAGAGGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIERIRRN*SAEGKT Trigger: AGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCG...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTAGCCTTGTGTGGTCATaGACACGTTGTCAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKCLATKTDPKSEVEKDTSLVWS*TRCQSH Trigger: ATGACTTTGACAACGTGTCCATGACCACACAAGGCT...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTTCCAGAAGGACTGCCCATaGGCTCAAATCCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WNEDAYSVQYCISEVHNFQKDCP*AQIQGE Trigger: TTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTG...GAAGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGTGCACGTGGGGTGGGTaGGTATTGTTGACCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIECTWGG*VLLTWN Trigger: ATTCCAGGTCAACAATACTCACCCACCCCACGTGCA...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGATTCCATTCAAACACCTaGTGCTTGTCATCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGFHSNT*CLSSKS Trigger: GGACTTTGATGACAAGCAGCAGGTGTTTGAATGGAA...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGATTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LATKTDPKSEVEKDTLKGLSKSW*SGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAA...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGTTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLATKTDPKSEVEKDTLKLSKSW*SGSFQV Trigger: GACTTGGAATGAACCAGACCACCATGACTTTGACAA...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTaGATTTTTCTAAAACAGGGTTTCTTACTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYQALY*IFLKQGFLLNL Trigger: CAGGTTCAGTAAGAAACCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTTAAACTTTTTGAACAGCATTCAAACACCTGCTaGTTGTCATCAAAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYLLSHLSSPTFKLFEQHSNTC*LSSKSV Trigger: CACGGACTTTGATGACAAGCAGCAGGTGTTTGAATG...CTGTTCAAAAAGTTTAAATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAAGAAACTAAATTTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCATTCAAACACCTaGTGCTTGTCATCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKKLNLDSVCVCVCVCVFHSNT*CLSSKS Trigger: GGACTTTGATGACAAGCAGCAGGTGTTTGAATGGAA...CACACACACACACACACACACACACACAGAGTCTAAATTTAGTTTCTTGAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTTGCTATGCTTTGGTCTTGTTTCACTTAAATCCTTCCCTGTCATTTCTTTTGTACATAAGTCCCTaGCCAGGTGACTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCYALVLFHLNPSLSFLLYISP*PGDFQK Trigger: CTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAA...AAGAAATGACAGGGAAGGATTTAAGTGAAACAAGACCAAAGCATAGCAAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGGAAGCTGGTTCTCCATaGGAAGGTCCAAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIEEAGSP*EGPRMH Trigger: ATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTC...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000140620.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAGAAAGACACTTTAAAGGGAAATAGGGGAAGAACAATAGAAGCTGACAGTTTCCATTCAAACACCTaGTGCTTGTCATCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEKDTLKGNRGRTIEADSFHSNT*CLSSKS Trigger: GGACTTTGATGACAAGCAGCAGGTGTTTGAATGGAA...ACTGTCAGCTTCTATTGTTCTTCCCCTATTTCCCTTTAAAGTGTCTTTCTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGTCAGGAAGCCTTGTGTaGTCATGGACACGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSLLQARVIWEEGTSIESGSLV*SWTRCQ Trigger: TTGACAACGTGTCCATGACCACACAAGGCTTCCTGA...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTACTCTTCACCTTTCTaGGAAAACTGGATCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IKCLATKTDPKSEVEKDTYSSPF*ENWISY Trigger: ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTA...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| 3UTR CAA 72 bp | ATGCTGAGAATGGAGCTGCAGGATTTAACGTTTGTCTaGCTATGCTTTGGTCTTGTTTCACTTAAATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLRMELQDLTFV*LCFGLVSLKSF Trigger: GAAGGATTTAAGTGAAACAAGACCAAAGCATAGCAAGACAAACGTTAAATCCTGCAGCTCCATTCTCAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVPSTLLDFSKKNASK*VKLYIS Trigger: ACTTATGTACAACTTCACCCACTTGGATGCATTCTT...TTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACACACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CWNEDAYSVQYCISEVHNSQSST*KRVSAH Trigger: ATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGA...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTTCCCTTTCTGGGAAAACTaGATCTCATATGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNEDAYSVQYCISEVHNFPFWEN*ISYVHR Trigger: CCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGG...GAAGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CCA 90 bp | TGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTTCAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WNEDAYSVQYCISEVHNFKNASK*VKLYIS Trigger: ACTTATGTACAACTTCACCCACTTGGATGCATTCTT...GAAGTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACTACTCTTCACCTTTCTaGGAAAACTGGATCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: CWNEDAYSVQYCISEVHNYSSPF*ENWISY Trigger: ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTA...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS GCA 90 bp | CTCAGCCACGGGGTCCTCCACCATGCGCATACGTCGGAACTGCTCTaGAGAGGGGAAGACTGGCTGGCCCATGTGCTGCCACGCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSHGVLHHAHTSELL*RGEDWLAHVLPRTV Trigger: TACAGTGCGTGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCGCATGGTGGAGGACCCCGTGGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS CCA 90 bp | CTCCACCATGCGCATACGTCGGAACTGCTCTGCAGAGGGGAAGACTaGCTGGCCCATGTGCTGCCACGCACTGTAGGGGCTGCTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHHAHTSELLCRGED*LAHVLPRTVGAAEL Trigger: CAACTCAGCAGCCCCTACAGTGCGTGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCGCATGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | CCGTTGTGGGTGGGGGCCCACCCTTTGGCTGGTGATCCCGGGATGTGTAAGATCTATGTCCACAGGCACTaGGAGCCCACACGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLWVGAHPLAGDPGMCKIYVHRH*EPTRSS Trigger: AGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATA...GATCTTACACATCCCGGGATCACCAGCCAAAGGGTGGGCCCCCACCCACAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS TCA 90 bp | CGCACGCCCACCTCGCCAGTGAAGAAGTTGGTTCCATTGGCACAGTaGCCCAGGAGGCTCCAGCACATTGGTGACCTTGTGTGGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RTPTSPVKKLVPLAQ*PRRLQHIGDLVWSW Trigger: CCATGACCACACAAGGTCACCAATGTGCTGGAGCCTCCTGGGTCACTGTGCCAATGGAACCAACTTCTTCACTGGCGAGGTGGGCGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCGGAGGCTCCAGCACATaGGTGACCTTGGCAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGNGNTTDTDCPAHHRIGGSST*VTLAGG Trigger: ACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCC...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAGGAGGCTCCAGCACATaGGTGACCTTGGCAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGRWAKVTPTGPIKCLATGGSST*VTLAGG Trigger: ACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCC...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTTGCAGTTTCAGGTAGACTGGAAGGCCAGGGAACCCTGGCCTGTCTCTAGCACATTGGTGACCTaGGCAGGGGGTGGAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WSLQFQVDWKAREPWPVSSTLVT*AGGGRN Trigger: ATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCT...AGAGACAGGCCAGGGTTCCCTGGCCTTCCAGTCTACCTGAAACTGCAAGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS TCA 90 bp | CAGGACACCCACTGTATGATTGCTGTCCAACACAGCCCCAGCCTTTaGGACCTCTGCCCAGAGTTGTTCTCCATCCAACAGGGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QDTHCMIAVQHSPSL*DLCPELFSIQQGHE Trigger: CTCATGGCCCTGTTGGATGGAGAACAACTCTGGGCAGAGGTCTCAAAGGCTGGGGCTGTGTTGGACAGCAATCATACAGTGGGTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS TCA 90 bp | GAATGCATCCAAGTGGGTGAAGTTGTACATAAGTCCCTGCCCAGGTaGCTTCCAGAAGCCGGTGCTCCTCCAGAAGGGCAACAGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ECIQVGEVVHKSLPR*LPEAGAPPEGQQRP Trigger: AGGCCTCTGTTGCCCTTCTGGAGGAGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | GCGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCAGCACATTGGTGACCTaGGCAGGGGGTGGAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AAGNGNTTDTDCPAHHRISTLVT*AGGGRN Trigger: ATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCT...GATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCGACCTCTGCCCAGAGTaGTTCTCCATCCAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EMATPQTQTVQHITGSWADLCPE*FSIQQG Trigger: GCCCTGTTGGATGGAGAACAACTCTGGGCAGAGGTC...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS GCA 90 bp | AGGTCCAAGAATGCATCCAAGTGGGTGAAGTTGTACATAAGTCCCTaGCCAGGTGACTTCCAGAAGCCGGTGCTCCTCCAGAAGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSKNASKWVKLYISP*PGDFQKPVLLQKGN Trigger: GTTGCCCTTCTGGAGGAGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | CGGCTGGAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCAAGCACATTGGTGACCTaGGCAGGGGGTGGAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLEMATPQTQTVQHITGSSTLVT*AGGGRN Trigger: ATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCT...TGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTCCAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACCTCTGCCCAGAGTaGTTCTCCATCCAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKVGKGHSNWAYKVLSHKDLCPE*FSIQQG Trigger: GCCCTGTTGGATGGAGAACAACTCTGGGCAGAGGTC...TTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCCTGCACAGCAAGCACTTTATCTACTGAGCCATCTTTCCAGTCCCACATTACACAGCCCCAGCCTTaGAGACCTCTGCCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WACTASTLSTEPSFQSHITQPQP*RPLPRV Trigger: AACTCTGGGCAGAGGTCTCAAAGGCTGGGGCTGTGT...AATGTGGGACTGGAAAGATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACACAGGGATACTGTGGTaGGGGTGTGCGTGGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVGKGHSNWAYKVLSHKDTGILW*GCAWVS Trigger: TGACACCCACGCACACCCCAACCACAGTATCCCTGT...GTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS CCA 90 bp | GGGAGAAGCTGGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGTCCCTGCCCAGGTGACTTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRSWFSMRRSKNASK*VKLYISPCPGDFLA Trigger: AGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CAA 90 bp | GAAATGGCAACACCACAGACACAGACTGTCCAGCACATCACAGGATCATGGGCCGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMATPQTQTVQHITGSWAVVMDT*SKSWWS Trigger: AGACCACCATGACTTTGACAACGTGTCCATGACCAC...GGCCCATGATCCTGTGATGTGCTGGACAGTCTGTGTCTGTGGTGTTGCCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGTGCTAGATATCTGAACACAAGTCCCTGGGCCTGCACAGCAAGCACTTTAACACAGCCCCAGCCTTaGAGACCTCTGCCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSARYLNTSPWACTASTLTQPQP*RPLPRV Trigger: AACTCTGGGCAGAGGTCTCAAAGGCTGGGGCTGTGT...TAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAAACACAGCCCCAGCCTTaGAGACCTCTGCCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSTLPYPDASAHSSRFIETQPQP*RPLPRV Trigger: AACTCTGGGCAGAGGTCTCAAAGGCTGGGGCTGTGT...TTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS CCA 90 bp | AAGTACCCAGAAGGACTGCCCATGAGCTCAAATCCAGGGAGAAGCTaGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KYPEGLPMSSNPGRS*FSMRRSKNASKWVK Trigger: CTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTGGGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS CCA 90 bp | GGGAGAAGCTGGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGTCCCTGCCCAGGTGACTTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSWFSMRRSKNASK*VKLYISPCPGDFQK Trigger: CTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCAGCTTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | CGGCCTCCTGTTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTGGATCTCTCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPVDWGILFTFLGKLDLSKWVK*YISPCP Trigger: TGGGCAGGGACTTATGTACAACTTCACCCACTTGGA...GAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS-3UTR CAA 90 bp | GGAGGAAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACATCAAACACCTGCTGCTaGTCATCAAAGTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRWAKVTPTGPIKCLATSNTCC*SSKSVK Trigger: CTTCACGGACTTTGATGACAAGCAGCAGGTGTTTGA...TGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR CAA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTATGGAGGAACTGCTGTaGGCAAACAGCAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKVTPTGPIKCLATKTDPMEELL*ANSRFW Trigger: CCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCAT...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | GGAATACAAGTGAAGTCAACGCTTCCCTACCCAGATGCTTCTGCTCATTCATCGTATGTCCACAGGCACTaGGAGCCCACACGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GIQVKSTLPYPDASAHSSYVHRH*EPTRSS Trigger: AGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATA...CGATGAATGAGCAGAAGCATCTGGGTAGGGAAGCGTTGACTTCACTTGTATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGTACTGGCTTTCGCAGCAACTGCACGTGGGGTGGGTGAGTATTGTTGACATACCTACCTGCTGCTaGTCATCAAAGTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CEYWLSQQLHVGWVSIVDIPTCC*SSKSVK Trigger: CTTCACGGACTTTGATGACAAGCAGCAGGTAGGTAT...GTCAACAATACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140620.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVGKGHSNWAYKVLSHKDSKWVK*YISPCP Trigger: TGGGCAGGGACTTATGTACAACTTCACCCACTTGGA...GTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KVGKGHSNWAYKVLSHKDVVMDT*SKSWWS Trigger: AGACCACCATGACTTTGACAACGTGTCCATGACCAC...GTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGCCCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTGTCTCTGTCCCTTCCACCAACACTAGGACAATAGGCATATATTGCCATTCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPVSVPSTNTRTIGIYCHSKWVK*YISPCP Trigger: TGGGCAGGGACTTATGTACAACTTCACCCACTTGGA...ATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGTCACTCCAACTGGGCCTATAAAGTGCTTAGCCACAAAGACTGACCCTTCAAACACCTGCTGCTaGTCATCAAAGTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AKVTPTGPIKCLATKTDPSNTCC*SSKSVK Trigger: CTTCACGGACTTTGATGACAAGCAGCAGGTGTTTGA...AGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAGTTGGAGTGACCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAGTCCCACATTTAAACTTTTTGAACAGCTGGGCATGGGGAGGAAGGTGGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSPTFKLFEQLGMGRKVVVMDT*SKSWWS Trigger: AGACCACCATGACTTTGACAACGTGTCCATGACCAC...CACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGACCTCTGCCCAGAGTaGTTCTCCATCCAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLATKTDPKSEVEKDTLKDLCPE*FSIQQG Trigger: GCCCTGTTGGATGGAGAACAACTCTGGGCAGAGGTC...CTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGAACAGGGATACTGTGGTaGGGGTGTGCGTGGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LATKTDPKSEVEKDTLKGTGILW*GCAWVS Trigger: TGACACCCACGCACACCCCAACCACAGTATCCCTGT...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTACAGGGATACTGTGGTaGGGGTGTGCGTGGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IKCLATKTDPKSEVEKDTTGILW*GCAWVS Trigger: TGACACCCACGCACACCCCAACCACAGTATCCCTGT...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS CCA 90 bp | CAAAGTCATGGTGGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCATACCTACCAATGTATCTCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSHGGLVHSKSQSST*KRVSAHTYQCISWP Trigger: TGGCCAGGAGATACATTGGTAGGTATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCATCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YPDASAHSSRFIESIGSPSKWVK*YISPCP Trigger: TGGGCAGGGACTTATGTACAACTTCACCCACTTGGA...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGTCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPRCFCSFIAVYRINRKSKWVK*YISPCP Trigger: TGGGCAGGGACTTATGTACAACTTCACCCACTTGGA...CTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
||
| CDS-3UTR CAA 90 bp | TTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTTTAAAGGGATATGTCCACAGGCACTaGGAGCCCACACGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LATKTDPKSEVEKDTLKGYVHRH*EPTRSS Trigger: AGATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATA...TCCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS CCA 90 bp | TTCAGGAAGCCTTGTGTGGTCATGGACACGTTGTCAAAGTCATGGTaGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTTGGAAACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRKPCVVMDTLSKSW*SGSFQVSKFHLETC Trigger: ACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGCTTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
||
| CDS-3UTR CAA 90 bp | TACCCAGATGCTTCTGCTCATTCATCGCGGTTTATCGAATCAATAGGAAGCCCATCAAACACCTGCTGCTaGTCATCAAAGTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YPDASAHSSRFIESIGSPSNTCC*SSKSVK Trigger: CTTCACGGACTTTGATGACAAGCAGCAGGTGTTTGA...TGGGCTTCCTATTGATTCGATAAACCGCGATGAATGAGCAGAAGCATCTGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGAATGAAGATGCTTACTCTGTGCAGTATTGTATTTCAGAAGTACATAACGGAGGCTCCAGCACATaGGTGACCTTGGCAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CWNEDAYSVQYCISEVHNGGSST*VTLAGG Trigger: ACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCC...GTTATGTACTTCTGAAATACAATACTGCACAGAGTAAGCATCTTCATTCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | ATAAAGTGCTTAGCCACAAAGACTGACCCTAAGTCTGAGGTAGAGAAAGACACTATGGAGGAACTGCTGTaGGCAAACAGCAGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: IKCLATKTDPKSEVEKDTMEELL*ANSRFW Trigger: CCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCAT...AGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTACCAAGCACTCTACTTGATTTTTCTAAAACAGGGATGGAGGAACTGCTGTaGGCAAACAGCAGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VCVCVCVPSTLLDFSKTGMEELL*ANSRFW Trigger: CCAGAACCTGCTGTTTGCCAACAGCAGTTCCTCCAT...CCCTGTTTTAGAAAAATCAAGTAGAGTGCTTGGTACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS-3UTR CAA 90 bp | CTCCTGTTGATTGGGGCATACTCTTCACCTTTCTGGGAAAACTGGATCTCATATTCAAACACCTGCTGCTaGTCATCAAAGTCCGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLIGAYSSPFWENWISYSNTCC*SSKSVK Trigger: CTTCACGGACTTTGATGACAAGCAGCAGGTGTTTGA...ATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATGCCCCAATCAACAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
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| CDS-3UTR CAA 90 bp | TATTTCAGTTTATTACAAGCTAGAGTCATTTGGGAAGAAGGAACCTCAATTGAGGTGGTCATGGACACGTaGTCAAAGTCATGGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: YFSLLQARVIWEEGTSIEVVMDT*SKSWWS Trigger: AGACCACCATGACTTTGACAACGTGTCCATGACCAC...CTCAATTGAGGTTCCTTCTTCCCAAATGACTCTAGCTTGTAATAAACTGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS TCA 72 bp | CAGCGGGCGGGCTGCGTCCACACGCACCAGGTACGGTaGCTCAGCCAGCGCCAAGGGCGCGGCCAAGAACGC | + |
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Preference number: 6 (lower is better) Translates to: QRAGCVHTHQVR*LSQRQGRGQER Trigger: GCGTTCTTGGCCGCGCCCTTGGCGCTGGCTGAGTCACCGTACCTGGTGCGTGTGGACGCAGCCCGCCCGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS GCA 72 bp | GCCACGGGGTCCTCCACCATGCGCATACGTCGGAACTaGTCTGCAGAGGGGAAGACTGGCTGGCCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: ATGSSTMRIRRN*SAEGKTGWPMC Trigger: GCACATGGGCCAGCCAGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCGCATGGTGGAGGACCCCGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS CCA 72 bp | GCGCATACGTCGGAACTGCTCTGCAGAGGGGAAGACTaGCTGGCCCATGTGCTGCCACGCACTGTAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AHTSELLCRGED*LAHVLPRTVGA Trigger: AGCCCCTACAGTGCGTGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCAGAGCAGTTCCGACGTATGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS CCA 72 bp | ATCCAACAGGGCCATGAGCCCCATGACTGTGAGTACTaGCTTTCGCAGCAACTGCACGTGGGGTGGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: IQQGHEPHDCEY*LSQQLHVGWVS Trigger: ACTCACCCACCCCACGTGCAGTTGCTGCGAAAGCCAGTACTCACAGTCATGGGGCTCATGGCCCTGTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS CAA 90 bp | CTCAATGCCACTGTGAGGTACGGCACCTATGTAGGCAAGGTTCAGTaGCTGGTCCCAACTAAGGTCGTACTGGTCAGCCTGGTCGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LNATVRYGTYVGKVQ*LVPTKVVLVSLVVR Trigger: CCTCACGACCAGGCTGACCAGTACGACCTTAGTTGGGACCAGCAACTGAACCTTGCCTACATAGGTGCCGTACCTCACAGTGGCATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS TCA 72 bp | CAAGTGGGTGAAGTTGTACATAAGTCCCTGCCCAGGTaGCTTCCAGAAGCCGGTGCTCCTCCAGAAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QVGEVVHKSLPR*LPEAGAPPEGQ Trigger: TTGCCCTTCTGGAGGAGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
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| CDS TCA 72 bp | CAAGTGGGTGAAGTTGTACATAAGTCCCTGCCCAGGTaGCTTCCTGGCTGTGATGAGATCCAGCAGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QVGEVVHKSLPR*LPGCDEIQQPV Trigger: CACTGGCTGCTGGATCTCATCACAGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS GCA 72 bp | AATGCATCCAAGTGGGTGAAGTTGTACATAAGTCCCTaGCCAGGTGACTTCCAGAAGCCGGTGCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NASKWVKLYISP*PGDFQKPVLLQ Trigger: CTGGAGGAGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
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| CDS CAA 72 bp | ACTGTGAGGTACGGCACCTATGTAGGCAAGGTTCAGTaGCTGGTCCCAACTAAGGTCGTACTGGTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TVRYGTYVGKVQ*LVPTKVVLVSL Trigger: CAGGCTGACCAGTACGACCTTAGTTGGGACCAGCAACTGAACCTTGCCTACATAGGTGCCGTACCTCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS CAA 72 bp | CACAGTGACCCAGGAGGCTCCAGCACATTGGTGACCTaGTGTGGTCATGGACACGTTGTCAAAGTCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HSDPGGSSTLVT*CGHGHVVKVMV Trigger: CACCATGACTTTGACAACGTGTCCATGACCACACAAGGTCACCAATGTGCTGGAGCCTCCTGGGTCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
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| CDS CAA 90 bp | TGGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCAGGTGACTTCCAGAAGCCGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: WFSMRRSKNASKWVK*YISPCPGDFQKPVL Trigger: GAGCACCGGCTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
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| CDS GCA 72 bp | AATGCATCCAAGTGGGTGAAGTTGTACATAAGTCCCTaGCCAGGTGACTTCCTGGCTGTGATGAGATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: NASKWVKLYISP*PGDFLAVMRSS Trigger: GCTGGATCTCATCACAGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS CCA 72 bp | AGGAGGCTCCAGCACATTGGTGACCTTGTGTGGTCATaGACACGTTGTCAAAGTCATGGTGGTCTGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RRLQHIGDLVWS*TRCQSHGGLVH Trigger: ATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGTCACCAATGTGCTGGAGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139734.2 |
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| CDS CAA 90 bp | TGGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCAGGTGACTTCCTGGCTGTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: WFSMRRSKNASKWVK*YISPCPGDFLAVMR Trigger: TCTCATCACAGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS CCA 72 bp | TGGTTCTCCATGAGAAGGTCCAAGAATGCATCCAAGTaGGTGAAGTTGTACATAAGTCCCTGCCCAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: WFSMRRSKNASK*VKLYISPCPGD Trigger: GTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS CAA 72 bp | ATGAGAAGGTCCAAGAATGCATCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCAGGTGACTTCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: MRRSKNASKWVK*YISPCPGDFLA Trigger: AGCCAGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000139734.2 ENSMUST00000140620.8 |
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| CDS CAA 72 bp | ATGAGAAGGTCCAAGAATGCATCCAAGTGGGTGAAGTaGTACATAAGTCCCTGCCCAGGTGACTTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: MRRSKNASKWVK*YISPCPGDFQK Trigger: CTTCTGGAAGTCACCTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119212.8 |
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| CDS CAA 90 bp | TCAAAGTCATGGTGGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTaGGAAACGTGTGTCAGCCCATACCTACCAATGTATCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SKSWWSGSFQVSKFH*ETCVSPYLPMYLLA Trigger: GGCCAGGAGATACATTGGTAGGTATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS GCA 72 bp | AAGAGAGAAACCAGGTCCTTCCATTCAAACACCTGCTaGTTGTCATCAAAGTCCGTGAAGTACCCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: KRETRSFHSNTC*LSSKSVKYPEG Trigger: TCCTTCTGGGTACTTCACGGACTTTGATGACAAGCAGCAGGTGTTTGAATGGAAGGACCTGGTTTCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS CCA 72 bp | GGTGGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTTaGAAACGTGTGTCAGCCCATACCTACCAATGTATC | + |
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Preference number: 6 (lower is better) Translates to: GGLVHSKSQSST*KRVSAHTYQCI Trigger: GATACATTGGTAGGTATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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| CDS CCA 72 bp | AGGCATCATAGTAATTCAGGAAGCCTTGTGTGGTCATaGACACGTTGTCAAAGTCATGGTGGTCTGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RHHSNSGSLVWS*TRCQSHGGLVH Trigger: ATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACAAGGCTTCCTGAATTACTATGATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 |
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| CDS CAA 72 bp | TGGTGGTCTGGTTCATTCCAAGTCTCAAAGTTCCACTaGGAAACGTGTGTCAGCCCATACCTACCAATGTAT | + |
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Preference number: 6 (lower is better) Translates to: WWSGSFQVSKFH*ETCVSPYLPMY Trigger: ATACATTGGTAGGTATGGGCTGACACACGTTTCCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071650.13 ENSMUST00000112563.9 ENSMUST00000119212.8 ENSMUST00000139734.2 |
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