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Pregenerated sensors for IDO2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031549

Ensembl transcript IDs: ENSMUST00000121992.2

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGGGTGGAGGTGGGAGCCACAATTAACAAAGCAGTAAAGCCATaGTTGGGCTCAGACAGAGCTCAGACCCTGGTTCTTGCTCCCACG +
Preference number: 1 (lower is better)
Translates to: GGVEVGATINKAVKP*LGSDRAQTLVLAPT
Trigger: CGTGGGAGCAAGAACCAGGGTCTGAGCTCTGTCTGAGCCCAAGCATGGCTTTACTGCTTTGTTAATTGTGGCTCCCACCTCCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR GCA 90 bp CTTGTCCACCTAATACTGAATGAGGAGGTCATGGCTGCAGCTCTCTaGTGTGAGGCAGGGGGATTAGGCAGTGCAGAAAGGCTTCTAGCA +
Preference number: 1 (lower is better)
Translates to: LVHLILNEEVMAAAL*CEAGGLGSAERLLA
Trigger: TGCTAGAAGCCTTTCTGCACTGCCTAATCCCCCTGCCTCACAGCAGAGAGCTGCAGCCATGACCTCCTCATTCAGTATTAGGTGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CCA 90 bp GTGGCTCATCCCTGTACATCCCAGCTACTCAGACTAAGGCCTGCCTaGGCTAAAGAGCTCAATACCAGCCTAGGCAACTCATCAAGACTT +
Preference number: 1 (lower is better)
Translates to: VAHPCTSQLLRLRPA*AKELNTSLGNSSRL
Trigger: AAGTCTTGATGAGTTGCCTAGGCTGGTATTGAGCTCTTTAGCCCAGGCAGGCCTTAGTCTGAGTAGCTGGGATGTACAGGGATGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR GCA 90 bp TCAGGAATACAGAGAGCTGGGACTGTAGTCAGGTGGTGGAGCAATTaGCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAA +
Preference number: 1 (lower is better)
Translates to: SGIQRAGTVVRWWSN*LVCANLWVSSPLGK
Trigger: TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTCCCAGCTCTCTGTATTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CCA 90 bp GACTTTCCTTCAGGAATACAGAGAGCTGGGACTGTAGTCAGGTGGTaGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCA +
Preference number: 1 (lower is better)
Translates to: DFPSGIQRAGTVVRW*SNCLVCANLWVSSP
Trigger: TGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTCCCAGCTCTCTGTATTCCTGAAGGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR TCA 90 bp CATCCCTGTACATCCCAGCTACTCAGACTAAGGCCTGCCTGGGCTAAAGAGCTCCTAGGATGCAGGATGTaGACCTCTAACGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: HPCTSQLLRLRPAWAKELLGCRM*TSNAGM
Trigger: CATCCCAGCGTTAGAGGTTCACATCCTGCATCCTAG...GAGCTCTTTAGCCCAGGCAGGCCTTAGTCTGAGTAGCTGGGATGTACAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR TCA 90 bp GGCAACTCATCAAGACTTTCCTTCAGGAATACAGAGAGCTGGGACTGTAGTCAGTGCAGCTCTCTGCTGTaGGGCAGGGGGATTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GNSSRLSFRNTESWDCSQCSSLL*GRGIRQ
Trigger: CTGCCTAATCCCCCTGCCTCACAGCAGAGAGCTGCA...CTGACTACAGTCCCAGCTCTCTGTATTCCTGAAGGAAAGTCTTGATGAGTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR CCA 90 bp CATCCCTGTACATCCCAGCTACTCAGACTAAGGCCTGCCTGGGCTAAAGAGCTCGGTGGAGCAATTGCCTaGTATGTGCAAATCTTTGGG +
Preference number: 2 (lower is better)
Translates to: HPCTSQLLRLRPAWAKELGGAIA*YVQIFG
Trigger: CCCAAAGATTTGCACATACCAGGCAATTGCTCCACC...GAGCTCTTTAGCCCAGGCAGGCCTTAGTCTGAGTAGCTGGGATGTACAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR TCA 90 bp TGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAAAGAAAGAGAGAGGGGTaGAAGACTAAGGGACGAGGG +
Preference number: 2 (lower is better)
Translates to: WSNCLVCANLWVSSPLGKRKREG*KTKGRG
Trigger: CCCTCGTCCCTTAGTCTTTCACCCCTCTCTCTTTCT...TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR TCA 90 bp CAGGTGGTGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTGATACAAAACATAGCTaGTACGCACAAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: QVVEQLPGMCKSLGVISTDTKHS*YAQGCW
Trigger: CCAGCATCCTTGTGCGTATCAGCTATGTTTTGTATC...AGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CAA 90 bp GACTGTAGTCAGGTGGTGGAGCAATTGCCTGGTATGTGCAAATCTTaGGGTGTCATCTCCACTAGGGAAAAACAAAAGAAACGAACACAC +
Preference number: 2 (lower is better)
Translates to: DCSQVVEQLPGMCKS*GVISTREKQKKRTH
Trigger: GTGTGTTCGTTTCTTTTGTTTTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR TCA 90 bp ATCTTCATCATCATCATCGTCATCATCGTTAGCAGCAGCAGCATGGCTCAGTGGATAACCTTTGAAGGGTaGGACAGGAAGATCACAGTT +
Preference number: 2 (lower is better)
Translates to: IFIIIIVIIVSSSSMAQWITFEG*DRKITV
Trigger: AACTGTGATCTTCCTGTCTCACCCTTCAAAGGTTAT...CCACTGAGCCATGCTGCTGCTGCTAACGATGATGACGATGATGATGATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR GCA 90 bp ATCTTCATCATCATCATCGTCATCATCGTTAGCAGCAGCAGCATGGCTCAGTGGCAATTGCCTGGTATGTaGAAATCTTTGGGTGTCATC +
Preference number: 2 (lower is better)
Translates to: IFIIIIVIIVSSSSMAQWQLPGM*KSLGVI
Trigger: GATGACACCCAAAGATTTGCACATACCAGGCAATTG...CCACTGAGCCATGCTGCTGCTGCTAACGATGATGACGATGATGATGATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR-3UTR GCA 90 bp CAACTTGATTCTTTTAAAATTGAGTTTGGGTATCTCCGACTTGTCCACCTAATAATGGCTGCAGCTCTCTaGTGTGAGGCAGGGGGATTA +
Preference number: 2 (lower is better)
Translates to: QLDSFKIEFGYLRLVHLIMAAAL*CEAGGL
Trigger: TAATCCCCCTGCCTCACAGCAGAGAGCTGCAGCCAT...TATTAGGTGGACAAGTCGGAGATACCCAAACTCAATTTTAAAAGAATCAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR TCA 72 bp CAGAGCTCAGACCCTGGTTCTTGCTCCCACGGGACCTaGCTGCTAAGCTCTAGGATGCAGGATGAGAACAGA +
Preference number: 3 (lower is better)
Translates to: QSSDPGSCSHGT*LLSSRMQDENR
Trigger: TCTGTTCTCATCCTGCATCCTAGAGCTTAGCAGTCAGGTCCCGTGGGAGCAAGAACCAGGGTCTGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR GCA 72 bp CTAATACTGAATGAGGAGGTCATGGCTGCAGCTCTCTaGTGTGAGGCAGGGGGATTAGGCAGTGCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: LILNEEVMAAAL*CEAGGLGSAER
Trigger: CCTTTCTGCACTGCCTAATCCCCCTGCCTCACAGCAGAGAGCTGCAGCCATGACCTCCTCATTCAGTATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR GCA 72 bp GAGGTGGGAGCCACAATTAACAAAGCAGTAAAGCCATaGTTGGGCTCAGACAGAGCTCAGACCCTGGTTCTT +
Preference number: 3 (lower is better)
Translates to: EVGATINKAVKP*LGSDRAQTLVL
Trigger: AAGAACCAGGGTCTGAGCTCTGTCTGAGCCCAAGCATGGCTTTACTGCTTTGTTAATTGTGGCTCCCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CCA 72 bp TCAGGAATACAGAGAGCTGGGACTGTAGTCAGGTGGTaGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: SGIQRAGTVVRW*SNCLVCANLWV
Trigger: CACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTCCCAGCTCTCTGTATTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CCA 72 bp CCTTCAGGAATACAGAGAGCTGGGACTGTAGTCAGGTaGTGGAGCAATTGCCTGGTATGTGCAAATCTTTGG +
Preference number: 3 (lower is better)
Translates to: PSGIQRAGTVVR*WSNCLVCANLW
Trigger: CCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTCCCAGCTCTCTGTATTCCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR TCA 72 bp CACACACACACACACACGTCACATACACATAACCTTTaGAGGGTGAGACAGGAAGATCACAGTTTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: HTHTHTSHTHNL*RVRQEDHSLRP
Trigger: GGGCCTCAAACTGTGATCTTCCTGTCTCACCCTTCAAAGGTTATGTGTATGTGACGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR GCA 72 bp GACTGTAGTCAGGTGGTGGAGCAATTGCCTGGTATGTaGAAATCTTTGGGTGTCATCTCCACTAGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: DCSQVVEQLPGM*KSLGVISTREK
Trigger: TTTTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTGACTACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CCA 72 bp AGGTGGTGGAGCAATTGCCTGGTATGTGCAAATCTTTaGGTGTCATCTCCACTAGGGAAAAACAAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: RWWSNCLVCANL*VSSPLGKNKRN
Trigger: GTTTCTTTTGTTTTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR GCA 90 bp CATCCCTGTACATCCCAGCTACTCAGACTAAGGCCTGCCTGGGCTAAAGAGCTCGAGAGTCTCAGCTGCTaGAGGGCTTCTAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HPCTSQLLRLRPAWAKELESLSC*RASSRV
Trigger: CACCCTGCTAGAAGCCCTGCAGCAGCTGAGACTCTC...GAGCTCTTTAGCCCAGGCAGGCCTTAGTCTGAGTAGCTGGGATGTACAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp ATTAGGCAGTGCAGAAAGGCTTCTAGCAAGCAAACTGGCTGGGGTGGGGTGGAGAGCACCAGGTCAGAGTaGACCAGGATAGGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: IRQCRKASSKQTGWGGVESTRSE*TRIGGS
Trigger: ACTCCCGCCTATCCTGGTCCACTCTGACCTGGTGCT...CTCCACCCCACCCCAGCCAGTTTGCTTGCTAGAAGCCTTTCTGCACTGCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp ATCTTCATCATCATCATCGTCATCATCGTTAGCAGCAGCAGCATGGCTCAGTGGTTAGCCCCCTGCTCCTaGCCCTGGTGGCAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: IFIIIIVIIVSSSSMAQWLAPCS*PWWQRR
Trigger: TCTCCGCTGCCACCAGGGCCAGGAGCAGGGGGCTAA...CCACTGAGCCATGCTGCTGCTGCTAACGATGATGACGATGATGATGATGAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp CGACTTGTCCACCTAATACTGAATGAGGAGGTCATGGCTGCAGCTCTCTGCTGTCCCCACAGGCATGGCTaGATTGTCCTTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RLVHLILNEEVMAAALCCPHRHG*IVLPPR
Trigger: TCTGGGTGGAAGGACAATCCAGCCATGCCTGTGGGG...ACAGCAGAGAGCTGCAGCCATGACCTCCTCATTCAGTATTAGGTGGACAAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR GCA 90 bp CGACTTGTCCACCTAATACTGAATGAGGAGGTCATGGCTGCAGCTCTCTGCTGTATGGAGAGTCTCAGCTaGTGCAGGGCTTCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLVHLILNEEVMAAALCCMESLS*CRASSR
Trigger: CCTGCTAGAAGCCCTGCAGCAGCTGAGACTCTCCAT...ACAGCAGAGAGCTGCAGCCATGACCTCCTCATTCAGTATTAGGTGGACAAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp ATTAGGCAGTGCAGAAAGGCTTCTAGCAAGCAAACTGGCTGGGGTGGGGTGGAGCTGTCTTCCAAGGCATaGGGTGAGGGATTAGTTAGC +
Preference number: 4 (lower is better)
Translates to: IRQCRKASSKQTGWGGVELSSKA*GEGLVS
Trigger: GCTAACTAATCCCTCACCCCATGCCTTGGAAGACAG...CTCCACCCCACCCCAGCCAGTTTGCTTGCTAGAAGCCTTTCTGCACTGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR TCA 90 bp GAAGATCACAGTTTGAGGCCCATCAGACCTGGTGCTTCACAGACAAAAAGGGAAGGGCCAAGGCTCTGGTaGTATCCTGGATGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: EDHSLRPIRPGASQTKREGPRLW*YPGWRV
Trigger: GACTCTCCATCCAGGATATCACCAGAGCCTTGGCCC...TTCCCTTTTTGTCTGTGAAGCACCAGGTCTGATGGGCCTCAAACTGTGATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR GCA 90 bp CATCCCTGTACATCCCAGCTACTCAGACTAAGGCCTGCCTGGGCTAAAGAGCTCAACTCTTTAGGAATCTaGAGTCCAGGAGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: HPCTSQLLRLRPAWAKELNSLGI*SPGEAS
Trigger: GGATGCCTCTCCTGGACTGCAGATTCCTAAAGAGTT...GAGCTCTTTAGCCCAGGCAGGCCTTAGTCTGAGTAGCTGGGATGTACAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR TCA 90 bp ATTAGGCAGTGCAGAAAGGCTTCTAGCAAGCAAACTGGCTGGGGTGGGGTGGAGAGAGGAAGATCCGGATaGCCGAGTAAAATATGTCTG +
Preference number: 4 (lower is better)
Translates to: IRQCRKASSKQTGWGGVERGRSG*PSKICL
Trigger: CAGACATATTTTACTCGGTCATCCGGATCTTCCTCT...CTCCACCCCACCCCAGCCAGTTTGCTTGCTAGAAGCCTTTCTGCACTGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR GCA 90 bp GAAGATCACAGTTTGAGGCCCATCAGACCTGGTGCTTCACAGACAAAAAGGGAACACGGAGCTCTGGGCTaGACTTCCTCCAGAGTACTT +
Preference number: 4 (lower is better)
Translates to: EDHSLRPIRPGASQTKREHGALG*TSSRVL
Trigger: AAGTACTCTGGAGGAAGTGCAGCCCAGAGCTCCGTG...TTCCCTTTTTGTCTGTGAAGCACCAGGTCTGATGGGCCTCAAACTGTGATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CAA 72 bp GTGGGAGCCACAATTAACAAAGCAGTAAAGCCATGCTaGGGCTCAGACAGAGCTCAGACCCTGGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VGATINKAVKPC*GSDRAQTLVLA
Trigger: AGCAAGAACCAGGGTCTGAGCTCTGTCTGAGCCCAAGCATGGCTTTACTGCTTTGTTAATTGTGGCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR TCA 90 bp TGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAACCATGGTCTTCTCCCTaGCACTCTTCAAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: WSNCLVCANLWVSSPLGKPWSSP*HSSRSS
Trigger: TGAGCTTCTTGAAGAGTGTCAGGGAGAAGACCATGG...TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR TCA 90 bp GGCAACTCATCAAGACTTTCCTTCAGGAATACAGAGAGCTGGGACTGTAGTCAGTTAAGTGAGGAAGTCTaGGGGCAATTTCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: GNSSRLSFRNTESWDCSQLSEEV*GQFPSK
Trigger: CTTGGATGGAAATTGCCCTCAGACTTCCTCACTTAA...CTGACTACAGTCCCAGCTCTCTGTATTCCTGAAGGAAAGTCTTGATGAGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp TGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAATATTCCTCAGAAATGTaGTATCTCCCCAAGGACAAC +
Preference number: 4 (lower is better)
Translates to: WSNCLVCANLWVSSPLGKYSSEM*YLPKDN
Trigger: GTTGTCCTTGGGGAGATACCACATTTCTGAGGAATA...TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp TGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAATGCTTCCAGAGGATTTaGAAGGAGAAAGCCATATTC +
Preference number: 4 (lower is better)
Translates to: WSNCLVCANLWVSSPLGKCFQRI*KEKAIF
Trigger: GAATATGGCTTTCTCCTTCCAAATCCTCTGGAAGCA...TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
3UTR CAA 72 bp CAGGTGGTGGAGCAATTGCCTGGTATGTGCAAATCTTaGGGTGTCATCTCCACTAGGGAAAAACAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QVVEQLPGMCKS*GVISTREKQKK
Trigger: TTTCTTTTGTTTTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCACCACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp CTAAGCAGGATACAAAACATAGCTGATACGCACAAGGATGCTGGATATAAAATGAATGGCAAGAGATCTTaGCAGCACCTTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSRIQNIADTHKDAGYKMNGKRS*QHLLGL
Trigger: CAACCCCAAAAGGTGCTGCCAAGATCTCTTGCCATT...CATTTTATATCCAGCATCCTTGTGCGTATCAGCTATGTTTTGTATCCTGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CCA 90 bp CAACTTGATTCTTTTAAAATTGAGTTTGGGTATCTCCGACTTGTCCACCTAATAAGGCTTGTAATGATCTaGAAGTGCTTCCAGAGGATT +
Preference number: 4 (lower is better)
Translates to: QLDSFKIEFGYLRLVHLIRLVMI*KCFQRI
Trigger: AATCCTCTGGAAGCACTTCCAGATCATTACAAGCCT...TATTAGGTGGACAAGTCGGAGATACCCAAACTCAATTTTAAAAGAATCAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 90 bp GCGCCATGTGTGCCAGGCGCTGCTCACGGTAACTCTTTAGGAATCTaGAGTCCAGGAGAGGCATCCTGTACACGTGAGCTCGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: APCVPGAAHGNSLGI*SPGEASCTRELGAG
Trigger: GCCAGCTCCGAGCTCACGTGTACAGGATGCCTCTCCTGGACTGCAGATTCCTAAAGAGTTACCGTGAGCAGCGCCTGGCACACATGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 90 bp AATGCCCAGGAACTCATCGAAGGCATGAAGCACGGAGCTCTGGGCTaGACTTCCTCCAGAGTACTTCAGAGGCTCTGTGGCAACACCTTC +
Preference number: 5 (lower is better)
Translates to: NAQELIEGMKHGALG*TSSRVLQRLCGNTF
Trigger: GAAGGTGTTGCCACAGAGCCTCTGAAGTACTCTGGAGGAAGTGCAGCCCAGAGCTCCGTGCTTCATGCCTTCGATGAGTTCCTGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 90 bp CCTTCTGGGTTCCTTTTGGTCCAGTTTGTCAGCACCAGGTCAGAGTaGACCAGGATAGGCGGGAGTCCCAAGTTCCTGGATACCTCAACA +
Preference number: 5 (lower is better)
Translates to: PSGFLLVQFVSTRSE*TRIGGSPKFLDTST
Trigger: TGTTGAGGTATCCAGGAACTTGGGACTCCCGCCTATCCTGGTCCACTCTGACCTGGTGCTGACAAACTGGACCAAAAGGAACCCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 90 bp ACACTTTCCTTGCAATGCTCAATGCCCAGGAACTCATCGAAGGCATaGAGCACGGAGCTCTGGGCTGCACTTCCTCCAGAGTACTTCAGA +
Preference number: 5 (lower is better)
Translates to: TLSLQCSMPRNSSKA*STELWAALPPEYFR
Trigger: TCTGAAGTACTCTGGAGGAAGTGCAGCCCAGAGCTCCGTGCTTCATGCCTTCGATGAGTTCCTGGGCATTGAGCATTGCAAGGAAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 90 bp CCCTCATTCTGTGTAGAAAGCCAACACTTTCCTTGCAATGCTCAATaGCCAGGAACTCATCGAAGGCATGAAGCACGGAGCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSFCVESQHFPCNAQ*PGTHRRHEARSSGL
Trigger: CAGCCCAGAGCTCCGTGCTTCATGCCTTCGATGAGTTCCTGGGCATTGAGCATTGCAAGGAAAGTGTTGGCTTTCTACACAGAATGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 90 bp ATATGTCTGGGTCCACATAATCATGCATTTGGGCCAAGGCTCTGGTaGTATCCTGGATGGAGAGTCTCAGCTGCTGCAGGGCTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: ICLGPHNHAFGPRLW*YPGWRVSAAAGLLA
Trigger: TGCTAGAAGCCCTGCAGCAGCTGAGACTCTCCATCCAGGATATCACCAGAGCCTTGGCCCAAATGCATGATTATGTGGACCCAGACATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 90 bp ACACGTGAGCTCGGAGCTGGCGGTTCTCGATTAAGTGAGGAAGTCTaGGGGCAATTTCCATCCAAGGCTTGTAATGATCTGGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: TRELGAGGSRLSEEV*GQFPSKACNDLEVL
Trigger: AAGCACTTCCAGATCATTACAAGCCTTGGATGGAAATTGCCCTCAGACTTCCTCACTTAATCGAGAACCGCCAGCTCCGAGCTCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 90 bp CAGGCATGGCTGGATTGTCCTTCCACCCAGAGAGGAAGATCCGGATaGCCGAGTAAAATATGTCTGGGTCCACATAATCATGCATTTGGG +
Preference number: 5 (lower is better)
Translates to: QAWLDCPSTQRGRSG*PSKICLGPHNHAFG
Trigger: CCCAAATGCATGATTATGTGGACCCAGACATATTTTACTCGGTCATCCGGATCTTCCTCTCTGGGTGGAAGGACAATCCAGCCATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 90 bp CTTCCACCCAGAGAGGAAGATCCGGATGACCGAGTAAAATATGTCTaGGTCCACATAATCATGCATTTGGGCCAAGGCTCTGGTGATATC +
Preference number: 5 (lower is better)
Translates to: LPPREEDPDDRVKYV*VHIIMHLGQGSGDI
Trigger: GATATCACCAGAGCCTTGGCCCAAATGCATGATTATGTGGACCCAGACATATTTTACTCGGTCATCCGGATCTTCCTCTCTGGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CAA 90 bp GGCAACTCATCAAGACTTTCCTTCAGGAATACAGAGAGCTGGGACTGTAGTCAGTCCTTTTGGTCCAGTTaGTCAGCACCAGGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: GNSSRLSFRNTESWDCSQSFWSS*SAPGQS
Trigger: ACTCTGACCTGGTGCTGACAAACTGGACCAAAAGGA...CTGACTACAGTCCCAGCTCTCTGTATTCCTGAAGGAAAGTCTTGATGAGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CAA 90 bp TGGAGCAATTGCCTGGTATGTGCAAATCTTTGGGTGTCATCTCCACTAGGGAAACCTTCTGGGTTCCTTTaGGTCCAGTTTGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: WSNCLVCANLWVSSPLGKPSGFL*VQFVST
Trigger: GGTGCTGACAAACTGGACCAAAAGGAACCCAGAAGG...TTTCCCTAGTGGAGATGACACCCAAAGATTTGCACATACCAGGCAATTGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CAA 90 bp GAAGATCACAGTTTGAGGCCCATCAGACCTGGTGCTTCACAGACAAAAAGGGAAAAGCCAACACTTTCCTaGCAATGCTCAATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EDHSLRPIRPGASQTKREKPTLS*QCSMPR
Trigger: CCTGGGCATTGAGCATTGCAAGGAAAGTGTTGGCTT...TTCCCTTTTTGTCTGTGAAGCACCAGGTCTGATGGGCCTCAAACTGTGATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS-3UTR CAA 90 bp GAAGATCACAGTTTGAGGCCCATCAGACCTGGTGCTTCACAGACAAAAAGGGAAGTGCTTCCAGAGGATTaGGAAGGAGAAAGCCATATT +
Preference number: 5 (lower is better)
Translates to: EDHSLRPIRPGASQTKREVLPED*EGESHI
Trigger: AATATGGCTTTCTCCTTCCAAATCCTCTGGAAGCAC...TTCCCTTTTTGTCTGTGAAGCACCAGGTCTGATGGGCCTCAAACTGTGATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 72 bp CACCAGGACACAGGAGGGCCTCCATGGTCTTCTCCCTaGCACTCTTCAAGAAGCTCAGCATGGCAGTACCCC +
Preference number: 6 (lower is better)
Translates to: HQDTGGPPWSSP*HSSRSSAWQYP
Trigger: GGGGTACTGCCATGCTGAGCTTCTTGAAGAGTGTCAGGGAGAAGACCATGGAGGCCCTCCTGTGTCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp GGGCTGCACTTCCTCCAGAGTACTTCAGAGGCTCTGTaGCAACACCTTCATAGACCAGCCCCACAGGCATGG +
Preference number: 6 (lower is better)
Translates to: GLHFLQSTSEAL*QHLHRPAPQAW
Trigger: CCATGCCTGTGGGGCTGGTCTATGAAGGTGTTGCCACAGAGCCTCTGAAGTACTCTGGAGGAAGTGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 72 bp GTGCCAGGCGCTGCTCACGGTAACTCTTTAGGAATCTaGAGTCCAGGAGAGGCATCCTGTACACGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: VPGAAHGNSLGI*SPGEASCTREL
Trigger: GAGCTCACGTGTACAGGATGCCTCTCCTGGACTGCAGATTCCTAAAGAGTTACCGTGAGCAGCGCCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 72 bp GAACTCATCGAAGGCATGAAGCACGGAGCTCTGGGCTaGACTTCCTCCAGAGTACTTCAGAGGCTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: ELIEGMKHGALG*TSSRVLQRLCG
Trigger: GCCACAGAGCCTCTGAAGTACTCTGGAGGAAGTGCAGCCCAGAGCTCCGTGCTTCATGCCTTCGATGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp GGCAACACCTTCATAGACCAGCCCCACAGGCATGGCTaGATTGTCCTTCCACCCAGAGAGGAAGATCCGGAT +
Preference number: 6 (lower is better)
Translates to: GNTFIDQPHRHG*IVLPPREEDPD
Trigger: ATCCGGATCTTCCTCTCTGGGTGGAAGGACAATCCAGCCATGCCTGTGGGGCTGGTCTATGAAGGTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp CTGTGGCAACACCTTCATAGACCAGCCCCACAGGCATaGCTGGATTGTCCTTCCACCCAGAGAGGAAGATCC +
Preference number: 6 (lower is better)
Translates to: LWQHLHRPAPQA*LDCPSTQRGRS
Trigger: GGATCTTCCTCTCTGGGTGGAAGGACAATCCAGCCATGCCTGTGGGGCTGGTCTATGAAGGTGTTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 72 bp TTGCAATGCTCAATGCCCAGGAACTCATCGAAGGCATaGAGCACGGAGCTCTGGGCTGCACTTCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: LQCSMPRNSSKA*STELWAALPPE
Trigger: CTCTGGAGGAAGTGCAGCCCAGAGCTCCGTGCTTCATGCCTTCGATGAGTTCCTGGGCATTGAGCATTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp TTCCTTTTGGTCCAGTTTGTCAGCACCAGGTCAGAGTaGACCAGGATAGGCGGGAGTCCCAAGTTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: FLLVQFVSTRSE*TRIGGSPKFLD
Trigger: ATCCAGGAACTTGGGACTCCCGCCTATCCTGGTCCACTCTGACCTGGTGCTGACAAACTGGACCAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CAA 90 bp ATGGTTTCCAGGTTACTGATTTCCAACGGTCCTTCTGGGTTCCTTTaGGTCCAGTTTGTCAGCACCAGGTCAGAGTGGACCAGGATAGGC +
Preference number: 6 (lower is better)
Translates to: MVSRLLISNGPSGFL*VQFVSTRSEWTRIG
Trigger: GCCTATCCTGGTCCACTCTGACCTGGTGCTGACAAACTGGACCAAAAGGAACCCAGAAGGACCGTTGGAAATCAGTAACCTGGAAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CAA 72 bp AGGTTACTGATTTCCAACGGTCCTTCTGGGTTCCTTTaGGTCCAGTTTGTCAGCACCAGGTCAGAGTGGACC +
Preference number: 6 (lower is better)
Translates to: RLLISNGPSGFL*VQFVSTRSEWT
Trigger: GGTCCACTCTGACCTGGTGCTGACAAACTGGACCAAAAGGAACCCAGAAGGACCGTTGGAAATCAGTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CAA 90 bp CCGGATGACCGAGTAAAATATGTCTGGGTCCACATAATCATGCATTaGGGCCAAGGCTCTGGTGATATCCTGGATGGAGAGTCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PDDRVKYVWVHIIMH*GQGSGDILDGESQL
Trigger: CAGCTGAGACTCTCCATCCAGGATATCACCAGAGCCTTGGCCCAAATGCATGATTATGTGGACCCAGACATATTTTACTCGGTCATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 72 bp CTCGGAGCTGGCGGTTCTCGATTAAGTGAGGAAGTCTaGGGGCAATTTCCATCCAAGGCTTGTAATGATCTG +
Preference number: 6 (lower is better)
Translates to: LGAGGSRLSEEV*GQFPSKACNDL
Trigger: CAGATCATTACAAGCCTTGGATGGAAATTGCCCTCAGACTTCCTCACTTAATCGAGAACCGCCAGCTCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 72 bp TGTGTAGAAAGCCAACACTTTCCTTGCAATGCTCAATaGCCAGGAACTCATCGAAGGCATGAAGCACGGAGC +
Preference number: 6 (lower is better)
Translates to: CVESQHFPCNAQ*PGTHRRHEARS
Trigger: GCTCCGTGCTTCATGCCTTCGATGAGTTCCTGGGCATTGAGCATTGCAAGGAAAGTGTTGGCTTTCTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp GATGGTTTCCAGGTTACTGATTTCCAACGGTCCTTCTaGGTTCCTTTTGGTCCAGTTTGTCAGCACCAGGTC +
Preference number: 6 (lower is better)
Translates to: DGFQVTDFQRSF*VPFGPVCQHQV
Trigger: GACCTGGTGCTGACAAACTGGACCAAAAGGAACCCAGAAGGACCGTTGGAAATCAGTAACCTGGAAACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS TCA 72 bp CTGGATTGTCCTTCCACCCAGAGAGGAAGATCCGGATaGCCGAGTAAAATATGTCTGGGTCCACATAATCAT +
Preference number: 6 (lower is better)
Translates to: LDCPSTQRGRSG*PSKICLGPHNH
Trigger: ATGATTATGTGGACCCAGACATATTTTACTCGGTCATCCGGATCTTCCTCTCTGGGTGGAAGGACAATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS GCA 72 bp AGTCCCTCATTCTGTGTAGAAAGCCAACACTTTCCTTaGAATGCTCAATGCCCAGGAACTCATCGAAGGCAT +
Preference number: 6 (lower is better)
Translates to: SPSFCVESQHFP*NAQCPGTHRRH
Trigger: ATGCCTTCGATGAGTTCCTGGGCATTGAGCATTGCAAGGAAAGTGTTGGCTTTCTACACAGAATGAGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CCA 72 bp AGAGAGGAAGATCCGGATGACCGAGTAAAATATGTCTaGGTCCACATAATCATGCATTTGGGCCAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: REEDPDDRVKYV*VHIIMHLGQGS
Trigger: AGAGCCTTGGCCCAAATGCATGATTATGTGGACCCAGACATATTTTACTCGGTCATCCGGATCTTCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2
CDS CAA 72 bp CGAGTAAAATATGTCTGGGTCCACATAATCATGCATTaGGGCCAAGGCTCTGGTGATATCCTGGATGGAGAG +
Preference number: 6 (lower is better)
Translates to: RVKYVWVHIIMH*GQGSGDILDGE
Trigger: CTCTCCATCCAGGATATCACCAGAGCCTTGGCCCAAATGCATGATTATGTGGACCCAGACATATTTTACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121992.2