Pregenerated sensors for IDO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031551Ensembl transcript IDs: ENSMUST00000033956.7, ENSMUST00000110667.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCAGGCCCAACTTCTCTaGGAGCTCGCAGTAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFQAQLL*ELAVGN Trigger: GTTCCCTACTGCGAGCTCTCAGAGAAGTTGGGCCTG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTGGAAGATGCTGCTCTaGCCTGCACTGCCCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFWKMLL*PALPPE Trigger: TTCAGGGGGCAGTGCAGGCCAGAGCAGCATCTTCCA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTGACCTTCTGGCAGCTTaGAGCTGCATTTCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFDLLAA*SCISSQ Trigger: CTGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTC...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCTGGCAGCTTGGAGCTaGATTTCCAGCCAGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFLAAWS*ISSQTD Trigger: ATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGCCAG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTCTGCTTTCCACATTTaGGGGCTCTTCCGACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFSAFHI*GLFRLV Trigger: GACAAGTCGGAAGAGCCCTCAAATGTGGAAAGCAGA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTGACGCTCTACTGCACTaGATACAGTGGGGATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFDALLH*IQWGLL Trigger: AAGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTC...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTAGGACATCAAGACTCTaGAAGATGCTGCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFRTSRL*KMLLWP Trigger: AGGCCAGAGCAGCATCTTCCAGAGTCTTGATGTCCT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTGTCCCCACCAGGAAATaGGAACAGAATGTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFVPTRK*EQNVHV Trigger: AACATGGACATTCTGTTCTCATTTCCTGGTGGGGAC...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCATTGTGTCTTGAAATaGCAAACTCACGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFHCVLK*QTHGLG Trigger: CCCCAGTCCGTGAGTTTGTCATTTCAAGACACAATG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTGCCAGGACACAGTCTaGATAAGACAGAATAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFCQDTV*IRQNRR Trigger: CCTCCTATTCTGTCTTATGCAGACTGTGTCCTGGCA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTTCCTGGAGGAATTCTaGAGGAGATTCTTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFFLEEF*RRFFAS Trigger: GCTGGCAAAGAATCTCCTGCAGAATTCCTCCAGGAA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTATGTCATGGGCCCATTaGGGTCCTTTTTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFMSWAH*GPFSSS Trigger: ACTGGAAGAAAAAGGACCCCAATGGGCCCATGACAT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTAGCTATGTCGTGCAGTaGCTTTTCCAATGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFSYVVQ*LFQCFQ Trigger: CTGAAAGCATTGGAAAAGGCACTGCACGACATAGCT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTAGCCAGACAGATATATaGGGAGAACGTGGAAAAACG | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFSQTDI*GERGKT Trigger: CGTTTTTCCACGTTCTCCGCATATATCTGTCTGGCT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCTGCAGGAGATTCTTTaGCAGCCTCGTGTTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFLQEIL*QPRVLF Trigger: GAATAAAACACGAGGCTGGCAAAGAATCTCCTGCAG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR TCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTGTCTTCATTGTGTCTTaGAATGACAAACTCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFVFIVS*NDKLTD Trigger: GTCCGTGAGTTTGTCATTTCAAGACACAATGAAGAC...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCTTTTTCTTCCAGTTTaGCAGGACACAGTCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFLFLPV*QDTVCI Trigger: TATGCAGACTGTGTCCTGGCAAACTGGAAGAAAAAG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTACTCTCTCATTTCCTaGAGGAATTCTGCAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFYSLIS*RNSAGD Trigger: ATCTCCTGCAGAATTCCTCCAGGAAATGAGAGAGTA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR GCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTGTAAGTATCTACTATTaGGAGGTGGAACTTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFVSIYY*EVELSH Trigger: GTGAGAAAGTTCCACCTCGCAATAGTAGATACTTAC...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTCTTCATCTATGTGGTaGTCTTCAAGGATCCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFSSSMW*SSRILL Trigger: TAGAAGGATCCTTGAAGACCACCACATAGATGAAGA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS TCA 90 bp | CCTTTCGAACATCGTCATCCCCTCGGTTCCACACATACGCCATGGTaGTGTACCCCAGGGCCAGGTGTGCCAGGCGCTGTAACCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PFEHRHPLGSTHTPW*CTPGPGVPGAVTCV Trigger: GACACAGGTTACAGCGCCTGGCACACCTGGCCCTGGGGTACATCACCATGGCGTATGTGTGGAACCGAGGGGATGACGATGTTCGAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS GCA 90 bp | GCAGGCCCAACTTCTCTGAGAGCTCGCAGTAGGGAACAGCAATATTaGGGGGCAGCACCTTTCGAACATCGTCATCCCCTCGGTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: AGPTSLRARSREQQY*GAAPFEHRHPLGST Trigger: TGTGGAACCGAGGGGATGACGATGTTCGAAAGGTGCTGCCCCGCAATATTGCTGTTCCCTACTGCGAGCTCTCAGAGAAGTTGGGCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 90 bp | CCGTCCGTGCTCAGTGTGGGCAGCTTTTCAACTTCTTCTCGAAGCTaGCCGTTCTCAATCAGCACAGGCAGATTTCTAGCCACAAGGACC | + |
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Preference number: 5 (lower is better) Translates to: PSVLSVGSFSTSSRS*PFSISTGRFLATRT Trigger: GGTCCTTGTGGCTAGAAATCTGCCTGTGCTGATTGAGAACGGGCAGCTTCGAGAAGAAGTTGAAAAGCTGCCCACACTGAGCACGGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS TCA 90 bp | GACACAGTCTGCATAAGACAGAATAGGAGGCAGGCCCAACTTCTCTaGGAGCTCGCAGTAGGGAACAGCAATATTGCGGGGCAGCACCTT | + |
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Preference number: 5 (lower is better) Translates to: DTVCIRQNRRQAQLL*ELAVGNSNIAGQHL Trigger: AAGGTGCTGCCCCGCAATATTGCTGTTCCCTACTGCGAGCTCTCAGAGAAGTTGGGCCTGCCTCCTATTCTGTCTTATGCAGACTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 90 bp | GACCTTCTGGCAGCTTGGAGCTGCATTTCCAGCCAGACAGATATATaGGGAGAACGTGGAAAAACGTGTCTGGGTCCACAAAGTCACGCA | + |
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Preference number: 5 (lower is better) Translates to: DLLAAWSCISSQTDI*GERGKTCLGPQSHA Trigger: TGCGTGACTTTGTGGACCCAGACACGTTTTTCCACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 90 bp | CCGGTGGGCTGGAGGCATGTACTCTCTCATTTCCTGGAGGAATTCTaGAGGAGATTCTTTGCCAGCCTCGTGTTTTATTCCCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PVGWRHVLSHFLEEF*RRFFASLVFYSQKD Trigger: GTCCTTCTGGGAATAAAACACGAGGCTGGCAAAGAATCTCCTGCAGAATTCCTCCAGGAAATGAGAGAGTACATGCCTCCAGCCCACCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 90 bp | TCACGGACTGGGGGAGCTGACTCTAAGAAGAAAAGGAAGTTCCGGTaGGCTGGAGGCATGTACTCTCTCATTTCCTGGAGGAATTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SRTGGADSKKKRKFR*AGGMYSLISWRNSA Trigger: TGCAGAATTCCTCCAGGAAATGAGAGAGTACATGCCTCCAGCCCACCGGAACTTCCTTTTCTTCTTAGAGTCAGCTCCCCCAGTCCGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 90 bp | GTTCTCGTATGTCATGGGCCCATTGGGGTCCTTTTTCTTCCAGTTTaGCAGGACACAGTCTGCATAAGACAGAATAGGAGGCAGGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VLVCHGPIGVLFLPV*QDTVCIRQNRRQAQ Trigger: TTGGGCCTGCCTCCTATTCTGTCTTATGCAGACTGTGTCCTGGCAAACTGGAAGAAAAAGGACCCCAATGGGCCCATGACATACGAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 90 bp | TCAGGTCTTGACGCTCTACTGCACTGGATACAGTGGGGATTGCTTTaGTTGCAGGAGAAGCTGCGATTTCCACCAATAGAGAGACGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGLDALLHWIQWGLL*LQEKLRFPPIERRG Trigger: TCCTCGTCTCTCTATTGGTGGAAATCGCAGCTTCTCCTGCAATCAAAGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTCAAGACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 90 bp | CTGGTAGCTATGTCGTGCAGTGCCTTTTCCAATGCTTTCAGGTCTTaGCGCTCTACTGCACTGGATACAGTGGGGATTGCTTTGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: LVAMSCSAFSNAFRS*RSTALDTVGIALIA Trigger: TGCAATCAAAGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTCAAGACCTGAAAGCATTGGAAAAGGCACTGCACGACATAGCTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 90 bp | AGCTTGGAGCTGCATTTCCAGCCAGACAGATATATGCGGAGAACGTaGAAAAACGTGTCTGGGTCCACAAAGTCACGCATCCTCTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: SLELHFQPDRYMRRT*KNVSGSTKSRILLK Trigger: TTTTAAGAGGATGCGTGACTTTGTGGACCCAGACACGTTTTTCCACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAGCTCCAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 90 bp | AAAAGGAAGTTCCGGTGGGCTGGAGGCATGTACTCTCTCATTTCCTaGAGGAATTCTGCAGGAGATTCTTTGCCAGCCTCGTGTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: KRKFRWAGGMYSLIS*RNSAGDSLPASCFI Trigger: AATAAAACACGAGGCTGGCAAAGAATCTCCTGCAGAATTCCTCCAGGAAATGAGAGAGTACATGCCTCCAGCCCACCGGAACTTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 90 bp | TCCACCAGTGGATGTGGTAGAGCAAAGCCCACATCTTCATCTATGTaGTGGTCTTCAAGGATCCTTCTAGAACCTTCTGTAGGAGATATT | + |
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Preference number: 5 (lower is better) Translates to: STSGCGRAKPTSSSM*WSSRILLEPSVGDI Trigger: AATATCTCCTACAGAAGGTTCTAGAAGGATCCTTGAAGACCACCACATAGATGAAGATGTGGGCTTTGCTCTACCACATCCACTGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTAGACCTTCTGGCAGCTaGGAGCTGCATTTCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFRPSGS*ELHFQP Trigger: TGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTCT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 90 bp | AGTGGGCTTCTTCTTCGAAGGTTTCATAATGTAAGTATCTACTATTaGGAGGTGGAACTTTCTCACAGAGACCAGACCATTCACACACTC | + |
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Preference number: 5 (lower is better) Translates to: SGLLLRRFHNVSIYY*EVELSHRDQTIHTL Trigger: GAGTGTGTGAATGGTCTGGTCTCTGTGAGAAAGTTCCACCTCGCAATAGTAGATACTTACATTATGAAACCTTCGAAGAAGAAGCCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTACAGTGGGGATTGCTTaGATTGCAGGAGAAGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFTVGIA*IAGEAA Trigger: CGCAGCTTCTCCTGCAATCAAAGCAATCCCCACTGT...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTATGTCATGGGCCCATaGGGGTCCTTTTTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFYVMGP*GSFFFQ Trigger: CTGGAAGAAAAAGGACCCCAATGGGCCCATGACATA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCTCTGCTTTCCACATTaGAGGGCTCTTCCGACTTGT | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFLCFPH*RALPTC Trigger: ACAAGTCGGAAGAGCCCTCAAATGTGGAAAGCAGAG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTCCTTTTTCTTCCAGTTaGCCAGGACACAGTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFPFSSS*PGHSLH Trigger: ATGCAGACTGTGTCCTGGCAAACTGGAAGAAAAAGG...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS-3UTR CAA 90 bp | ATAGTCTTACTTGGTGGATCTGATTTAATGAGCTATGACAGGATGAAGGTGTTTTCTGCAGGAGATTCTTaGCCAGCCTCGTGTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: IVLLGGSDLMSYDRMKVFSAGDS*PASCFI Trigger: AATAAAACACGAGGCTGGCAAAGAATCTCCTGCAGA...AAACACCTTCATCCTGTCATAGCTCATTAAATCAGATCCACCAAGTAAGACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 72 bp | CATCGTCATCCCCTCGGTTCCACACATACGCCATGGTaGTGTACCCCAGGGCCAGGTGTGCCAGGCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HRHPLGSTHTPW*CTPGPGVPGAV Trigger: TACAGCGCCTGGCACACCTGGCCCTGGGGTACATCACCATGGCGTATGTGTGGAACCGAGGGGATGACGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS TCA 72 bp | GGGATTCGTACCCCCAGTCCCTCTGCTTTCCACATTTaGGGGCTCTTCCGACTTGTCGCCATCAGTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GIRTPSPSAFHI*GLFRLVAISGL Trigger: AAGCCCACTGATGGCGACAAGTCGGAAGAGCCCTCAAATGTGGAAAGCAGAGGGACTGGGGGTACGAATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 72 bp | TGGGGTGTCCCAGACCCCCTCATACAGCAGACCTTCTaGCAGCTTGGAGCTGCATTTCCAGCCAGACAGATA | + |
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Preference number: 6 (lower is better) Translates to: WGVPDPLIQQTF*QLGAAFPARQI Trigger: TATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTCTGCTGTATGAGGGGGTCTGGGACACCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CAA 90 bp | TTTGGGGTGTCCCAGACCCCCTCATACAGCAGACCTTCTGGCAGCTaGGAGCTGCATTTCCAGCCAGACAGATATATGCGGAGAACGTGG | + |
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Preference number: 6 (lower is better) Translates to: FGVSQTPSYSRPSGS*ELHFQPDRYMRRTW Trigger: CCACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTCTGCTGTATGAGGGGGTCTGGGACACCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | CCAGGCGCTGTAACCTGTGTCCTCTCAGTCCGTCCGTaGTCAGTGTGGGCAGCTTTTCAACTTCTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PGAVTCVLSVRP*SVWAAFQLLLE Trigger: TTCGAGAAGAAGTTGAAAAGCTGCCCACACTGAGCACGGACGGACTGAGAGGACACAGGTTACAGCGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS GCA 72 bp | ACTTCTCTGAGAGCTCGCAGTAGGGAACAGCAATATTaGGGGGCAGCACCTTTCGAACATCGTCATCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TSLRARSREQQY*GAAPFEHRHPL Trigger: GAGGGGATGACGATGTTCGAAAGGTGCTGCCCCGCAATATTGCTGTTCCCTACTGCGAGCTCTCAGAGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | CCCCCTCATACAGCAGACCTTCTGGCAGCTTGGAGCTaGATTTCCAGCCAGACAGATATATGCGGAGAACGT | + |
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Preference number: 6 (lower is better) Translates to: PPHTADLLAAWS*ISSQTDICGER Trigger: ACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGCCAGAAGGTCTGCTGTATGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 72 bp | TTCCGGTGGGCTGGAGGCATGTACTCTCTCATTTCCTaGAGGAATTCTGCAGGAGATTCTTTGCCAGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FRWAGGMYSLIS*RNSAGDSLPAS Trigger: CGAGGCTGGCAAAGAATCTCCTGCAGAATTCCTCCAGGAAATGAGAGAGTACATGCCTCCAGCCCACCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 72 bp | GGGGGAGCTGACTCTAAGAAGAAAAGGAAGTTCCGGTaGGCTGGAGGCATGTACTCTCTCATTTCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GGADSKKKRKFR*AGGMYSLISWR Trigger: CCTCCAGGAAATGAGAGAGTACATGCCTCCAGCCCACCGGAACTTCCTTTTCTTCTTAGAGTCAGCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 72 bp | TGCATAAGACAGAATAGGAGGCAGGCCCAACTTCTCTaGGAGCTCGCAGTAGGGAACAGCAATATTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CIRQNRRQAQLL*ELAVGNSNIAG Trigger: CCCCGCAATATTGCTGTTCCCTACTGCGAGCTCTCAGAGAAGTTGGGCCTGCCTCCTATTCTGTCTTATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | CTCAGTGTGGGCAGCTTTTCAACTTCTTCTCGAAGCTaGCCGTTCTCAATCAGCACAGGCAGATTTCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSVGSFSTSSRS*PFSISTGRFLA Trigger: GGCTAGAAATCTGCCTGTGCTGATTGAGAACGGGCAGCTTCGAGAAGAAGTTGAAAAGCTGCCCACACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS GCA 72 bp | GGGGTCCTTTTTCTTCCAGTTTGCCAGGACACAGTCTaGATAAGACAGAATAGGAGGCAGGCCCAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GVLFLPVCQDTV*IRQNRRQAQLL Trigger: GAGAAGTTGGGCCTGCCTCCTATTCTGTCTTATGCAGACTGTGTCCTGGCAAACTGGAAGAAAAAGGACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | GCAGCTTGGAGCTGCATTTCCAGCCAGACAGATATATaGGGAGAACGTGGAAAAACGTGTCTGGGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: AAWSCISSQTDI*GERGKTCLGPQ Trigger: TTGTGGACCCAGACACGTTTTTCCACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAGCTCCAAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CAA 72 bp | GCGATTTCCACCAATAGAGAGACGAGGAAGAAGCCCTaGTCGCAGTCCCCACCAGGAAATGAGAACAGAATG | + |
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Preference number: 6 (lower is better) Translates to: AISTNRETRKKP*SQSPPGNENRM Trigger: CATTCTGTTCTCATTTCCTGGTGGGGACTGCGACAAGGGCTTCTTCCTCGTCTCTCTATTGGTGGAAATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 72 bp | GACGCTCTACTGCACTGGATACAGTGGGGATTGCTTTaGTTGCAGGAGAAGCTGCGATTTCCACCAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: DALLHWIQWGLL*LQEKLRFPPIE Trigger: CTCTATTGGTGGAAATCGCAGCTTCTCCTGCAATCAAAGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS TCA 72 bp | ATGTCGTGCAGTGCCTTTTCCAATGCTTTCAGGTCTTaGCGCTCTACTGCACTGGATACAGTGGGGATTGCT | + |
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Preference number: 6 (lower is better) Translates to: MSCSAFSNAFRS*RSTALDTVGIA Trigger: AGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTCAAGACCTGAAAGCATTGGAAAAGGCACTGCACGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 72 bp | CTGCATTTCCAGCCAGACAGATATATGCGGAGAACGTaGAAAAACGTGTCTGGGTCCACAAAGTCACGCATC | + |
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Preference number: 6 (lower is better) Translates to: LHFQPDRYMRRT*KNVSGSTKSRI Trigger: GATGCGTGACTTTGTGGACCCAGACACGTTTTTCCACGTTCTCCGCATATATCTGTCTGGCTGGAAATGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | TGCCTTTTCCAATGCTTTCAGGTCTTGACGCTCTACTaGACTGGATACAGTGGGGATTGCTTTGATTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CLFQCFQVLTLY*TGYSGDCFDCR Trigger: CCTGCAATCAAAGCAATCCCCACTGTATCCAGTGCAGTAGAGCGTCAAGACCTGAAAGCATTGGAAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS GCA 72 bp | CTCTCATTTCCTGGAGGAATTCTGCAGGAGATTCTTTaGCAGCCTCGTGTTTTATTCCCAGAAGGACATCAA | + |
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Preference number: 6 (lower is better) Translates to: LSFPGGILQEIL*QPRVLFPEGHQ Trigger: TTGATGTCCTTCTGGGAATAAAACACGAGGCTGGCAAAGAATCTCCTGCAGAATTCCTCCAGGAAATGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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| CDS CCA 72 bp | TGTGGTAGAGCAAAGCCCACATCTTCATCTATGTGGTaGTCTTCAAGGATCCTTCTAGAACCTTCTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: CGRAKPTSSSMW*SSRILLEPSVG Trigger: TCCTACAGAAGGTTCTAGAAGGATCCTTGAAGACCACCACATAGATGAAGATGTGGGCTTTGCTCTACCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS CCA 72 bp | GGATGTGGTAGAGCAAAGCCCACATCTTCATCTATGTaGTGGTCTTCAAGGATCCTTCTAGAACCTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GCGRAKPTSSSM*WSSRILLEPSV Trigger: TACAGAAGGTTCTAGAAGGATCCTTGAAGACCACCACATAGATGAAGATGTGGGCTTTGCTCTACCACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033956.7 |
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| CDS GCA 72 bp | CTTCTTCGAAGGTTTCATAATGTAAGTATCTACTATTaGGAGGTGGAACTTTCTCACAGAGACCAGACCATT | + |
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Preference number: 6 (lower is better) Translates to: LLRRFHNVSIYY*EVELSHRDQTI Trigger: AATGGTCTGGTCTCTGTGAGAAAGTTCCACCTCGCAATAGTAGATACTTACATTATGAAACCTTCGAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033956.7 ENSMUST00000110667.8 |
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