Pregenerated sensors for IDI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033520Ensembl transcript IDs: ENSMUST00000038598.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACAGCTGATGACATAGCAGAGATGACAGCTGTGGTCCTTGTCTaGGCCTCTGCTGTCCATGAGACTAAGGAGAGCAGATGCTCCGCA | + |
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Preference number: 1 (lower is better) Translates to: VTADDIAEMTAVVLV*ASAVHETKESRCSA Trigger: TGCGGAGCATCTGCTCTCCTTAGTCTCATGGACAGCAGAGGCTCAGACAAGGACCACAGCTGTCATCTCTGCTATGTCATCAGCTGTGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR-3UTR TCA 90 bp | CACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCACCACAGCTGTGGTCCTTGTCTaGGCCTCTGCTGTCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: HHRPAMNSSCTLLSSCTTAVVLV*ASAVHE Trigger: CTCATGGACAGCAGAGGCTCAGACAAGGACCACAGC...TGTGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCAATCAAGGGAACAATTaGTTAAAACTCGCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCNQGNN*LKLAGW Trigger: CCAGCCTGCGAGTTTTAACCAATTGTTCCCTTGATT...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR TCA 72 bp | TGGCCTCAAACTCAGAGATCCATCTACCTCTGTCTTTaGGTGCTCGGACTAAACGTGTGTGCCACCACCGAC | + |
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Preference number: 3 (lower is better) Translates to: WPQTQRSIYLCL*VLGLNVCATTD Trigger: GTCGGTGGTGGCACACACGTTTAGTCCGAGCACTCAAAGACAGAGGTAGATGGATCTCTGAGTTTGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR GCA 72 bp | TGCTGGGAGGTAGGTAGCATTCTTAGCTCCAGCTTCTaGCTCACTGGTTTCTCTCTGACCTTAGGCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: CWEVGSILSSSF*LTGFSLTLGLK Trigger: CTTCAGGCCTAAGGTCAGAGAGAAACCAGTGAGGCAGAAGCTGGAGCTAAGAATGCTACCTACCTCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR TCA 72 bp | GATGACATAGCAGAGATGACAGCTGTGGTCCTTGTCTaGGCCTCTGCTGTCCATGAGACTAAGGAGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: DDIAEMTAVVLV*ASAVHETKESR Trigger: TCTGCTCTCCTTAGTCTCATGGACAGCAGAGGCTCAGACAAGGACCACAGCTGTCATCTCTGCTATGTCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR TCA 72 bp | CTCGGACTAAACGTGTGTGCCACCACCGACCAGCTATaGATTCCTCATGTACATTGTTATCATCATGCACCA | + |
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Preference number: 3 (lower is better) Translates to: LGLNVCATTDQL*IPHVHCYHHAP Trigger: TGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACACACGTTTAGTCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCGAATCAAGGGAACAATaGGTTAAAACTCGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCESREQ*VKTRRL Trigger: CAGCCTGCGAGTTTTAACCAATTGTTCCCTTGATTC...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR CCA 72 bp | AAGTTTGATTTCTCATTACATTTGTACAAAGCACTCTaGTATGTTCTGTTGTTGTCACTACTAGGTAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: KFDFSLHLYKAL*YVLLLSLLGRV Trigger: TACCCTACCTAGTAGTGACAACAACAGAACATACCAGAGTGCTTTGTACAAATGTAATGAGAAATCAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR GCA 90 bp | TGCCTCACTGGTTTCTCTCTGACCTTAGGCCTGAAGGAATTGAGTCACACAATCATGCCCAGCTCAGCCTaGAGACGTCTTAGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLTGFSLTLGLKELSHTIMPSSA*RRLRAA Trigger: GGCAGCCCTAAGACGTCTGCAGGCTGAGCTGGGCAT...GATTGTGTGACTCAATTCCTTCAGGCCTAAGGTCAGAGAGAAACCAGTGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR CAA 72 bp | CTGGCCTCAAACTCAGAGATCCATCTACCTCTGTCTTaGAGTGCTCGGACTAAACGTGTGTGCCACCACCGA | + |
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Preference number: 4 (lower is better) Translates to: LASNSEIHLPLS*SARTKRVCHHR Trigger: TCGGTGGTGGCACACACGTTTAGTCCGAGCACTCAAAGACAGAGGTAGATGGATCTCTGAGTTTGAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR GCA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCTCTGGTCCTGGGAGATaGCCAGCTCAGCCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCSGPGR*PAQPAD Trigger: GTCTGCAGGCTGAGCTGGGCATCTCCCAGGACCAGA...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR GCA 90 bp | TGCCTCACTGGTTTCTCTCTGACCTTAGGCCTGAAGGAATTGAGTCACACAATCCTGTCCAGTAGCTCCTaGACGTCCTTCTGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: CLTGFSLTLGLKELSHTILSSSS*TSFWLM Trigger: CATGAGCCAGAAGGACGTGCAGGAGCTACTGGACAG...GATTGTGTGACTCAATTCCTTCAGGCCTAAGGTCAGAGAGAAACCAGTGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR CAA 72 bp | TCCCCTCACCCTTGTGCAAGCAATTCAAATCCTGCCTaGGAGCTGACCTCAGCTATAGACTGTACTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SPHPCASNSNPA*ELTSAIDCTSP Trigger: GGGAGAAGTACAGTCTATAGCTGAGGTCAGCTCCAAGGCAGGATTTGAATTGCTTGCACAAGGGTGAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGTGCAAGCAATTCAAATCCTGCCTTGGAGCTGACCTCAGCTATAGACTGTCCTTTATGGAAATCTaGTCCTGGGAGATGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PLCKQFKSCLGADLSYRLSFMEI*SWEMPS Trigger: GCTGGGCATCTCCCAGGACCAGATTTCCATAAAGGA...CAGTCTATAGCTGAGGTCAGCTCCAAGGCAGGATTTGAATTGCTTGCACAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGTGCAAGCAATTCAAATCCTGCCTTGGAGCTGACCTCAGCTATAGACTGCTGGAAATGTGTACTTaGCATCTGCTCTCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PLCKQFKSCLGADLSYRLLEMCT*HLLSAG Trigger: TCCAGCAGAGAGCAGATGCCAAGTACACATTTCCAG...CAGTCTATAGCTGAGGTCAGCTCCAAGGCAGGATTTGAATTGCTTGCACAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | CCCTTGTGCAAGCAATTCAAATCCTGCCTTGGAGCTGACCTCAGCTATAGACTGTCCCCAGATAGCATCTaGCTGACACTTGTGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: PLCKQFKSCLGADLSYRLSPDSI*LTLVVF Trigger: AAATACCACAAGTGTCAGTCAGATGCTATCTGGGGA...CAGTCTATAGCTGAGGTCAGCTCCAAGGCAGGATTTGAATTGCTTGCACAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | CACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCACCACATCTCCTCCAGACGTTTaGGCTGGAGTTCATCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: HHRPAMNSSCTLLSSCTTSPPDV*AGVHQG Trigger: ACCTTGATGAACTCCAGCTCAAACGTCTGGAGGAGA...TGTGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | CACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCACCACAGACACATCCTCTAAATaGGGCCACCAAGAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: HHRPAMNSSCTLLSSCTTDTSSK*GHQENR Trigger: CCTGTTCTCTTGGTGGCCTCATTTAGAGGATGTGTC...TGTGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR GCA 90 bp | CACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCACCACATTGGCATCTGCTCTCTaGTGGACCAAGAGCTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: HHRPAMNSSCTLLSSCTTLASAL*WTKSSF Trigger: AAACGAGCTCTTGGTCCAGCAGAGAGCAGATGCCAA...TGTGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| 3UTR CAA 72 bp | CTCACTGGTTTCTCTCTGACCTTAGGCCTGAAGGAATaGAGTCACACAATCCCAGTTGAGACTTTGATACAC | + |
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Preference number: 4 (lower is better) Translates to: LTGFSLTLGLKE*SHTIPVETLIH Trigger: GTGTATCAAAGTCTCAACTGGGATTGTGTGACTCAATTCCTTCAGGCCTAAGGTCAGAGAGAAACCAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CCA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCGTCTGTAAAATGTCCTaGAAATGTGTACTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCVCKMS*KCVLGI Trigger: GATGCCAAGTACACATTTCCAGGACATTTTACAGAC...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CCA 90 bp | TTGATTTCTCATTACATTTGTACAAAGCACTCTGGTATGTTCTGTTGTTGTCACATGGAAATCTGGTCCTaGGAGATGCCCAGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LISHYICTKHSGMFCCCHMEIWS*EMPSSA Trigger: GGCTGAGCTGGGCATCTCCCAGGACCAGATTTCCAT...GTGACAACAACAGAACATACCAGAGTGCTTTGTACAAATGTAATGAGAAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CCA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCAGATTATGTCCTTTATaGAAATCTGGTCCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCRLCPL*KSGPGR Trigger: TCTCCCAGGACCAGATTTCCATAAAGGACATAATCT...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCATTACATTTGTACAAAGCACTCTGGTATGTTCTGTTGTTGTCACGGCACATACAGAGGGTaGCTAGAACAGGAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LISHYICTKHSGMFCCCHGTYRG*LEQESV Trigger: TACAGACTCCTGTTCTAGTCACCCTCTGTATGTGCC...GTGACAACAACAGAACATACCAGAGTGCTTTGTACAAATGTAATGAGAAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCATTACATTTGTACAAAGCACTCTGGTATGTTCTGTTGTTGTCACCAGATAGCATCTGACTaGCACTTGTGGTATTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LISHYICTKHSGMFCCCHQIASD*HLWYFR Trigger: CCGAAAATACCACAAGTGTCAGTCAGATGCTATCTG...GTGACAACAACAGAACATACCAGAGTGCTTTGTACAAATGTAATGAGAAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR TCA 90 bp | TTGATTTCTCATTACATTTGTACAAAGCACTCTGGTATGTTCTGTTGTTGTCACGGTATTTTCGGGTCATaGAGATTATGTCCTTTATGG | + |
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Preference number: 4 (lower is better) Translates to: LISHYICTKHSGMFCCCHGIFGS*RLCPLW Trigger: CCATAAAGGACATAATCTTCATGACCCGAAAATACC...GTGACAACAACAGAACATACCAGAGTGCTTTGTACAAATGTAATGAGAAATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS GCA 90 bp | ATGTCCTTTATGGAAATCTGGTCCTGGGAGATGCCCAGCTCAGCCTaGAGACGTCTTAGGGCTGCCCTCCTCACTCCCAAGGCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: MSFMEIWSWEMPSSA*RRLRAALLTPKASF Trigger: GAAGGATGCCTTGGGAGTGAGGAGGGCAGCCCTAAGACGTCTGCAGGCTGAGCTGGGCATCTCCCAGGACCAGATTTCCATAAAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS CCA 90 bp | TATTTTCGGGTCATGAAGATTATGTCCTTTATGGAAATCTGGTCCTaGGAGATGCCCAGCTCAGCCTGCAGACGTCTTAGGGCTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: YFRVMKIMSFMEIWS*EMPSSACRRLRAAL Trigger: GAGGGCAGCCCTAAGACGTCTGCAGGCTGAGCTGGGCATCTCCCAGGACCAGATTTCCATAAAGGACATAATCTTCATGACCCGAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CAA 90 bp | CCCTTGTGCAAGCAATTCAAATCCTGCCTTGGAGCTGACCTCAGCTATAGACTGCCTGGAAATGTGTACTaGGCATCTGCTCTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLCKQFKSCLGADLSYRLPGNVY*ASALCW Trigger: CCAGCAGAGAGCAGATGCCAAGTACACATTTCCAGG...CAGTCTATAGCTGAGGTCAGCTCCAAGGCAGGATTTGAATTGCTTGCACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS TCA 90 bp | CCCAAGGCATCCTTCTCTTCCAGCTCCTCAGGCACATACAGAGGGTaGCTAGAACAGGAGTCTGTAAAATGTCCTGGAAATGTGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: PKASFSSSSSGTYRG*LEQESVKCPGNVYL Trigger: CAAGTACACATTTCCAGGACATTTTACAGACTCCTGTTCTAGTCACCCTCTGTATGTGCCTGAGGAGCTGGAAGAGAAGGATGCCTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS CCA 90 bp | TTGTGGTATTTTCGGGTCATGAAGATTATGTCCTTTATGGAAATCTaGTCCTGGGAGATGCCCAGCTCAGCCTGCAGACGTCTTAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LWYFRVMKIMSFMEI*SWEMPSSACRRLRA Trigger: AGCCCTAAGACGTCTGCAGGCTGAGCTGGGCATCTCCCAGGACCAGATTTCCATAAAGGACATAATCTTCATGACCCGAAAATACCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CAA 90 bp | CACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCACCACAATCTCCTCCAGACGTTaGAGCTGGAGTTCATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: HHRPAMNSSCTLLSSCTTISSRR*SWSSSR Trigger: CCTTGATGAACTCCAGCTCAAACGTCTGGAGGAGAT...TGTGGTGCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS-3UTR CAA 90 bp | GTGTGCCACCACCGACCAGCTATGAATTCCTCATGTACATTGTTATCATCATGCAGCTCGTTTTTCATGTaGAAAAGGACCACACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: VCHHRPAMNSSCTLLSSCSSFFM*KRTTLK Trigger: CTTCAGTGTGGTCCTTTTCAACATGAAAAACGAGCT...GCATGATGATAACAATGTACATGAGGAATTCATAGCTGGTCGGTGGTGGCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS GCA 72 bp | AGATTATGTCCTTTATGGAAATCTGGTCCTGGGAGATaGCCAGCTCAGCCTGCAGACGTCTTAGGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RLCPLWKSGPGR*PAQPADVLGLP Trigger: GGGCAGCCCTAAGACGTCTGCAGGCTGAGCTGGGCATCTCCCAGGACCAGATTTCCATAAAGGACATAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS CAA 72 bp | TCTGCTCTCTGCTGGACCAAGAGCTCGTTTTTCATGTaGAAAAGGACCACACTGAAGGCTCTGTGTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SALCWTKSSFFM*KRTTLKALCSR Trigger: TCTGCTACACAGAGCCTTCAGTGTGGTCCTTTTCAACATGAAAAACGAGCTCTTGGTCCAGCAGAGAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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| CDS GCA 72 bp | GTCTGTAAAATGTCCTGGAAATGTGTACTTGGCATCTaGTCTCTGCTGGACCAAGAGCTCGTTTTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: VCKMSWKCVLGI*SLLDQELVFHV Trigger: AACATGAAAAACGAGCTCTTGGTCCAGCAGAGAGCAGATGCCAAGTACACATTTCCAGGACATTTTACAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038598.3 |
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