Pregenerated sensors for IDI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058258Ensembl transcript IDs: ENSMUST00000169314.9, ENSMUST00000177397.8, ENSMUST00000177400.8, ENSMUST00000177447.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTAGGGACTCAACAACCCATGACATCATGCCTGCAAGGCAATCATaGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: VRDSTTHDIMPARQS*YTELSPEPCPFNLL Trigger: TAAGAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGCAGGCATGATGTCATGGGTTGTTGAGTCCCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGCGCCATATACTTCCCTCTGAACCTGCTCTaGCTGTTGCTGCTGTTGTTACAATTATCTTTAGGGTTAGGGACT | + |
|
Preference number: 1 (lower is better) Translates to: ERERESAIYFPLNLL*LLLLLLQLSLGLGT Trigger: AGTCCCTAACCCTAAAGATAATTGTAACAACAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGGCGCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 90 bp | CAAACATCCAAGGGCTCAAGCAACTGTCTATTAATATTTGATCTGTaGCGCACATGCAGACGTCTCCTTATCATAAAGCATAGTACAACT | + |
|
Preference number: 1 (lower is better) Translates to: QTSKGSSNCLLIFDL*RTCRRLLIIKHSTT Trigger: AGTTGTACTATGCTTTATGATAAGGAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCCCTTGGATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 90 bp | AAGGGCTCAAGCAACTGTCTATTAATATTTGATCTGTGCCGCACATaGAGACGTCTCCTTATCATAAAGCATAGTACAACTATCATTTAC | + |
|
Preference number: 1 (lower is better) Translates to: KGSSNCLLIFDLCRT*RRLLIIKHSTTIIY Trigger: GTAAATGATAGTTGTACTATGCTTTATGATAAGGAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGAGAGAGCGCCATATACTTCCCTCTGAACCTGCTCTGCCTGTTGCTGCTGCTGTCTCCTGAGCCCTaGCCATTTAACCTCTTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ERESAIYFPLNLLCLLLLLSPEP*PFNLLV Trigger: CACTAAGAGGTTAAATGGGCAGGGCTCAGGAGACAG...CAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGGCGCTCTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CAA 90 bp | GAGAGAGAGAGCGCCATATACTTCCCTCTGAACCTGCTCTGCCTGTaGCTGCTGTTGTTACAATTATCTTTAGGGTTAGGGACTCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: ERESAIYFPLNLLCL*LLLLQLSLGLGTQQ Trigger: TTGTTGAGTCCCTAACCCTAAAGATAATTGTAACAACAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGGCGCTCTCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTTGAGGCTAGCCTAGTCTACAAATTGAGTTCTAGAATAGCCAGAGCTACACCATATACTTCCCTCTaGACCTGCTCTGCCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: GFEASLVYKLSSRIARATPYTSL*TCSACC Trigger: GCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGG...TGTAGCTCTGGCTATTCTAGAACTCAATTTGTAGACTAGGCTAGCCTCAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCAAGCAACTGTCTATTAATATTTGATCTGTGCCGCACATGCAGACGTCTCCAACCCATGACATCATaGCTGCAAGGCAATCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: GSSNCLLIFDLCRTCRRLQPMTS*LQGNHG Trigger: ACCATGATTGCCTTGCAGGCATGATGTCATGGGTTG...GAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTTGAGGCTAGCCTAGTCTACAAATTGAGTTCTAGAATAGCCAGAGCTACATTAATATTTGATCTGTaGCGCACATGCAGACGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GFEASLVYKLSSRIARATLIFDL*RTCRRL Trigger: GAGACGTCTGCATGTGCGGCACAGATCAAATATTAA...TGTAGCTCTGGCTATTCTAGAACTCAATTTGTAGACTAGGCTAGCCTCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTTGAGGCTAGCCTAGTCTACAAATTGAGTTCTAGAATAGCCAGAGCTACATGCTCTGCCTGTTGCTaGTGTTGTTACAATTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GFEASLVYKLSSRIARATCSACC*CCYNYL Trigger: AAGATAATTGTAACAACAGCAGCAACAGGCAGAGCA...TGTAGCTCTGGCTATTCTAGAACTCAATTTGTAGACTAGGCTAGCCTCAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAAGAGCTCAAATGTGACACACCTGTGGCAAGTTTTAAAAGAACATCAATCGGCCTTTTAAATCTGTaGGCCAAACATCCAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SKELKCDTPVASFKRTSIGLLNL*AKHPRA Trigger: AGCCCTTGGATGTTTGGCCCACAGATTTAAAAGGCC...GATTGATGTTCTTTTAAAACTTGCCACAGGTGTGTCACATTTGAGCTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAAGAGCTCAAATGTGACACACCTGTGGCAAGTTTTAAAAGAACATCAATCCACCCATTCAAATTCTaGTTGTTGCTGGCCATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SKELKCDTPVASFKRTSIHPFKF*LLLAMW Trigger: CCACATGGCCAGCAACAACCAGAATTTGAATGGGTG...GATTGATGTTCTTTTAAAACTTGCCACAGGTGTGTCACATTTGAGCTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAAGAGCTCAAATGTGACACACCTGTGGCAAGTTTTAAAAGAACATCAATCATTAGTATACAGAACTaGCCTTTTAAATCTGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SKELKCDTPVASFKRTSIISIQN*PFKSVG Trigger: GCCCACAGATTTAAAAGGCCAGTTCTGTATACTAAT...GATTGATGTTCTTTTAAAACTTGCCACAGGTGTGTCACATTTGAGCTCTTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CCA 72 bp | GCTGGCCATGTGGTACACTCCTTTAATCCCAGTACCTaGGAGTCAGAGGAAGGTGGATCTCTGGGTTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGHVVHSFNPST*ESEEGGSLGFE Trigger: CTCAAAACCCAGAGATCCACCTTCCTCTGACTCCCAGGTACTGGGATTAAAGGAGTGTACCACATGGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CCA 72 bp | TCAACAACCCATGACATCATGCCTGCAAGGCAATCATaGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: STTHDIMPARQS*YTELSPEPCPF Trigger: AAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGCAGGCATGATGTCATGGGTTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAGCGCCATATACTTCCCTCTaGACCTGCTCTGCCTGTTGCTGCTGTTGTTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: ERERERAPYTSL*TCSACCCCCYN Trigger: ATTGTAACAACAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGGCGCTCTCTCTCTCTCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 72 bp | AGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTaGCCATTTAACCTCTTAGTGCTGTTTCAAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RQSWYTELSPEP*PFNLLVLFQSS Trigger: GCTGCTTTGAAACAGCACTAAGAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 72 bp | TCTTTAGGGTTAGGGACTCAACAACCCATGACATCATaGCTGCAAGGCAATCATGGTACACTGAGCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLGLGTQQPMTS*LQGNHGTLSCL Trigger: GAGACAGCTCAGTGTACCATGATTGCCTTGCAGGCATGATGTCATGGGTTGTTGAGTCCCTAACCCTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCAAGCAACTGTCTATTAATATTTGATCTGTGCCGCACATGCAGACGTCTCAACCTGCTCTGCCTGTaGCTGCTGTTGTTACAATTA | + |
|
Preference number: 3 (lower is better) Translates to: GSSNCLLIFDLCRTCRRLNLLCL*LLLLQL Trigger: TAATTGTAACAACAGCAGCAACAGGCAGAGCAGGTT...GAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CCA 72 bp | CGTTACGGGACTCTTGATTATCACCCATTCAAATTCTaGTTGTTGCTGGCCATGTGGTACACTCCTTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: RYGTLDYHPFKF*LLLAMWYTPLI Trigger: GATTAAAGGAGTGTACCACATGGCCAGCAACAACCAGAATTTGAATGGGTGATAATCAAGAGTCCCGTAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR TCA 72 bp | AACATCCAAGGGCTCAAGCAACTGTCTATTAATATTTaGTCTGTGCCGCACATGCAGACGTCTCCTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: NIQGLKQLSINI*SVPHMQTSPYH Trigger: ATGATAAGGAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCCCTTGGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 72 bp | AAGGGCTCAAGCAACTGTCTATTAATATTTGATCTGTaGCGCACATGCAGACGTCTCCTTATCATAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KGSSNCLLIFDL*RTCRRLLIIKH Trigger: ATGCTTTATGATAAGGAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCTTGAGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR TCA 72 bp | GTCAGTAATATGCAAATACGATACCTTCTATCGACTTaGGCATCCAGTATTGGTTATACAGGGTTCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSNMQIRYLLST*ASSIGYTGFLR Trigger: TCTCAGGAACCCTGTATAACCAATACTGGATGCTCAAGTCGATAGAAGGTATCGTATTTGCATATTACTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CCA 72 bp | CAAAAATTAGTATACAGAACTGGCCTTTTAAATCTGTaGGCCAAACATCCAAGGGCTCAAGCAACTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: QKLVYRTGLLNL*AKHPRAQATVY Trigger: ATAGACAGTTGCTTGAGCCCTTGGATGTTTGGCCCACAGATTTAAAAGGCCAGTTCTGTATACTAATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR GCA 72 bp | AGCAACTGTCTATTAATATTTGATCTGTGCCGCACATaGAGACGTCTCCTTATCATAAAGCATAGTACAACT | + |
|
Preference number: 3 (lower is better) Translates to: SNCLLIFDLCRT*RRLLIIKHSTT Trigger: AGTTGTACTATGCTTTATGATAAGGAGACGTCTGCATGTGCGGCACAGATCAAATATTAATAGACAGTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCGGTGCTGAGAAGCTGTaGGGAGAGCTGTACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARQSWYTELSPEPCPFNLGAEKL*GELYFN Trigger: ATTGAAGTACAGCTCTCCGCACAGCTTCTCAGCACC...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCACAGAATGTCTGATCTaGCCTAGAACACAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ARQSWYTELSPEPCPFNLTECLI*PRTQRF Trigger: GAATCTCTGTGTTCTAGGTCAGATCAGACATTCTGT...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCATCTCCGCTAGAAGCTaGACCTGTTTTTCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARQSWYTELSPEPCPFNLISARS*TCFSSR Trigger: TCTTGATGAAAAACAGGTTCAGCTTCTAGCGGAGAT...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCGGGTTACTTAATGGATaGCTACAGCAACTATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARQSWYTELSPEPCPFNLGLLNG*LQQLLV Trigger: CACCAATAGTTGCTGTAGTCATCCATTAAGTAACCC...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CAA 72 bp | AGCGCCATATACTTCCCTCTGAACCTGCTCTGCCTGTaGCTGCTGTTGTTACAATTATCTTTAGGGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAIYFPLNLLCL*LLLLQLSLGLG Trigger: CCCTAACCCTAAAGATAATTGTAACAACAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTATATGGCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCATTGGTGAAACAACCTaGAAAGGTAATTTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ARQSWYTELSPEPCPFNLIGETT*KGNFSI Trigger: GATGCTAAAATTACCTTTCCAGGTTGTTTCACCAAT...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CAA 72 bp | TACTTCCCTCTGAACCTGCTCTGCCTGTTGCTGCTGTaGTTACAATTATCTTTAGGGTTAGGGACTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YFPLNLLCLLLL*LQLSLGLGTQQ Trigger: TTGTTGAGTCCCTAACCCTAAAGATAATTGTAACAACAGCAGCAACAGGCAGAGCAGGTTCAGAGGGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| 3UTR CAA 72 bp | TACGGGACTCTTGATTATCACCCATTCAAATTCTGGTaGTTGCTGGCCATGTGGTACACTCCTTTAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YGTLDYHPFKFW*LLAMWYTPLIP Trigger: TGGGATTAAAGGAGTGTACCACATGGCCAGCAACAACCAGAATTTGAATGGGTGATAATCAAGAGTCCCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCTTGTAGTAAATTCTTGTTAGATAATCCATTTCATTTAGATCAACCTGAGGGTGCTGAGAAGCTGTaGGGAGAGCTGTACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPCSKFLLDNPFHLDQPEGAEKL*GELYFN Trigger: ATTGAAGTACAGCTCTCCGCACAGCTTCTCAGCACC...CTCAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177397.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCTGCTGTTGTTACAATTATCTTTAGGGTTAGGGACTCAACAACCCATGTTTCATCAAGATGGCTaGTATTTATTTCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLQLSLGLGTQQPMFHQDG*YLFQAL Trigger: CAATGCCTGAAATAAATACCAGCCATCTTGATGAAA...CATGGGTTGTTGAGTCCCTAACCCTAAAGATAATTGTAACAACAGCAGCAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCTTGTAGTAAATTCTTGTTAGATAATCCATTTCATTTAGATCAACCTGAGACAGAATGTCTGATCTaGCCTAGAACACAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GPCSKFLLDNPFHLDQPETECLI*PRTQRF Trigger: GAATCTCTGTGTTCTAGGTCAGATCAGACATTCTGT...CTCAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177397.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCTTGTAGTAAATTCTTGTTAGATAATCCATTTCATTTAGATCAACCTGAGATCTCCGCTAGAAGCTaGACCTGTTTTTCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPCSKFLLDNPFHLDQPEISARS*TCFSSR Trigger: TCTTGATGAAAAACAGGTTCAGCTTCTAGCGGAGAT...CTCAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177397.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGAGCTCAAATGTGACACACCTGTGGCAAGTTTTAAAAGAACATCAATCAATTTCACCACTGGCTaGCTTCTTCAAAATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKELKCDTPVASFKRTSINFTTG*LLQNFS Trigger: AGAGAAATTTTGAAGAAGGCAGCCAGTGGTGAAATT...GATTGATGTTCTTTTAAAACTTGCCACAGGTGTGTCACATTTGAGCTCTTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR CCA 90 bp | TCTAAAGAGCTCAAATGTGACACACCTGTGGCAAGTTTTAAAAGAACATCAATCTGTTTTTCATCAAGATaGCTGGTATTTATTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKELKCDTPVASFKRTSICFSSR*LVFISG Trigger: GCCTGAAATAAATACCAGCCATCTTGATGAAAAACA...GATTGATGTTCTTTTAAAACTTGCCACAGGTGTGTCACATTTGAGCTCTTTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTGTAGTAAATTCTTGTTAGATAATCCATTTCATTTAGATCAACCTGAGTTTCATCAAGATGGCTaGTATTTATTTCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GPCSKFLLDNPFHLDQPEFHQDG*YLFQAL Trigger: CAATGCCTGAAATAAATACCAGCCATCTTGATGAAA...CTCAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177397.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTGTAGTAAATTCTTGTTAGATAATCCATTTCATTTAGATCAACCTGAGTGTTTTTCATCAAGATaGCTGGTATTTATTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPCSKFLLDNPFHLDQPECFSSR*LVFISG Trigger: GCCTGAAATAAATACCAGCCATCTTGATGAAAAACA...CTCAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177397.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCAATCATGGTACACTGAGCTGTCTCCTGAGCCCTGCCCATTTAACCTCCCAGATACCATCAGATaGGGCCTTGTAGTAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARQSWYTELSPEPCPFNLPDTIR*GLVVNS Trigger: AGAATTTACTACAAGGCCCAATCTGATGGTATCTGG...GAGGTTAAATGGGCAGGGCTCAGGAGACAGCTCAGTGTACCATGATTGCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS GCA 72 bp | TGTGCGGAGAGCTGTACTTCAATCCTCTCCGCAGCATaGTCCGCCTCCAGGCCCCGCCCTCTAACAGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CAESCTSILSAA*SASRPRPLTAY Trigger: ATATGCTGTTAGAGGGCGGGGCCTGGAGGCGGAGCATGCTGCGGAGAGGATTGAAGTACAGCTCTCCGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS GCA 72 bp | AACACAGAGATTCCGGCTGCAGGTGCTGAGAAGCTGTaGGGAGAGCTGTACTTCAATCCTCTCCGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: NTEIPAAGAEKL*GELYFNPLRSM Trigger: CATGCTGCGGAGAGGATTGAAGTACAGCTCTCCGCACAGCTTCTCAGCACCTGCAGCCGGAATCTCTGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169314.9 |
||
| CDS GCA 72 bp | GGGTATTCCCAACTCGGCTTTCAAGCGCCGCTTTGCTaGTCGCTTCACACCAATGGCGTTGTTCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GYSQLGFQAPLC*SLHTNGVVLFQ Trigger: CTGGAAGAGAACAACGCCATTGGTGTGAAGCGAGCAGCAAAGCGGCGCTTGAAAGCCGAGTTGGGAATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000169314.9 ENSMUST00000177397.8 ENSMUST00000177400.8 ENSMUST00000177447.2 |
||
| CDS CAA 72 bp | TCATCCTGTCATCAGATTGGGCCTTGTAGTAAATTCTaGTTAGATAATCCATTTCATTTAGATCAACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCHQIGPCSKF*LDNPFHLDQPL Trigger: AAGAGGTTGATCTAAATGAAATGGATTATCTAACAAGAATTTACTACAAGGCCCAATCTGATGACAGGATGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177400.8 |
||