Pregenerated sensors for IDH3G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002010Ensembl transcript IDs: ENSMUST00000052761.9
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTaGGAAGAGAGTCCTACAGACAAGCTGAGCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: WVLSPKLAGVLK*EESPTDKLSKT Trigger: AGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| 3UTR CCA 72 bp | AGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTaGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAA | + |
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Preference number: 3 (lower is better) Translates to: SGFILGPVPQAS*SAKVRRESYRQ Trigger: TTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | GGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTACCTGCTACGCTCTCATaGTCCAGGCTGCTGTACTCG | + |
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Preference number: 4 (lower is better) Translates to: GTEVALFWVLSPKLAGVLPATLS*SRLLYS Trigger: CGAGTACAGCAGCCTGGAGCATGAGAGCGTAGCAGG...TAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | ATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCCTGAGGGTAGTGGGCTaGTACTTCCCTGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: ILGPVPQASWSAKVRRESLRVVG*YFPAAL Trigger: CAGTGCTGCAGGGAAGTAGCAGCCCACTACCCTCAG...GGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | CTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCTACACTTCCCTGCAGCACTaGAGGAAGAGTCCATCACCC | + |
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Preference number: 4 (lower is better) Translates to: LGPVPQASWSAKVRRESYTSLQH*RKSPSP Trigger: GGGTGATGGACTCTTCCTCCAGTGCTGCAGGGAAGT...GTAGGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | ATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCATGTCCTGGATGGCTTaGGATGTGGTGCCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ILGPVPQASWSAKVRRESMSWMA*DVVPWP Trigger: AGGCCAGGGCACCACATCCCAAGCCATCCAGGACAT...GGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | ATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCAGTTGGCTTGAGCATTaGCTTTGCAGCACCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ILGPVPQASWSAKVRRESSWLEH*LCSTAS Trigger: GCTGGCGGTGCTGCAAAGGCAATGCTCAAGCCAACT...GGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | TGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTATGTCTATGTCCTTGTaGCGGGTCACCACTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: WNRSGFILGPVPQASWSAMSMSL*RVTTPG Trigger: GCCAGGAGTGGTGACCCGGCACAAGGACATAGACAT...AGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | GGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTATGGCTTGGGATGTGGTaGCCTGGCCTCCAATATCTG | + |
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Preference number: 4 (lower is better) Translates to: GTEVALFWVLSPKLAGVLWLGMW*PGLQYL Trigger: CAGATATTGGAGGCCAGGGCACCACATCCCAAGCCA...TAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | GGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGACCGGGTCACCACTCCTaGCAGGCTCTTACAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GFILGPVPQASWSAKVRRPGHHS*QALTVD Trigger: ATCCACTGTAAGAGCCTGCCAGGAGTGGTGACCCGG...TCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGGGATGGCTTGGGATGTaGTGCCCTGGCCTCCAATAT | + |
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Preference number: 4 (lower is better) Translates to: SGTEVALFWVLSPKLAGVGWLGM*CPGLQY Trigger: ATATTGGAGGCCAGGGCACCACATCCCAAGCCATCC...CACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | GGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTATCATGCTGTCAAAGGTaGTCTGAGGGTAGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GTEVALFWVLSPKLAGVLSCCQR*SEGSGL Trigger: CAGCCCACTACCCTCAGATCACCTTTGACAGCATGA...TAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | TCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTTGAGCATTGCCTTTaGAGCACCGCCAGCAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SGTEVALFWVLSPKLAGVLEHCL*STASSY Trigger: ATAGCTGCTGGCGGTGCTGCAAAGGCAATGCTCAAG...CACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | TTCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTAGAGGAGAGTTGGCTTaGGCATTGCCTTTGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FWNRSGFILGPVPQASWSRGELA*ALPLQH Trigger: GTGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCT...ACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | AGCTGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTTCCGGCGGATGGCCATaGTGGCATTGCGGATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SWSAKVRRESYRQAEQNCSGGWP*WHCGCP Trigger: AGGACATCCGCAATGCCATCATGGCCATCCGCCGGA...ACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | GGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: GTEVALFWVLSPKLAGVLGSYSG*RWHRGL Trigger: TAGACCTCTATGCCAACGTCATCCACTGTAAGAGCC...TAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | TCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCATCACCCAGTTTCATaGTGTTGGCCTTGTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SGTEVALFWVLSPKLAGVHHPVS*CWPCAQ Trigger: CTGTGCACAAGGCCAACATCATGAAACTGGGTGATG...CACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | TTCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTTCTCATGCTCCAGGCTaGTGTACTCGCCTTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: FWNRSGFILGPVPQASWSSHAPG*CTRLLC Trigger: ACACAGAAGGCGAGTACAGCAGCCTGGAGCATGAGA...ACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | GGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGCCGATGCCATCCCCTaGGATCATAGTCACTGTATG | + |
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Preference number: 4 (lower is better) Translates to: GFILGPVPQASWSAKVRRADAIP*DHSHCM Trigger: CATACAGTGACTATGATCCCAGGGGATGGCATCGGC...TCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | ATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCATGCTAAGACAGCTTTaGGGATGGAAGTGGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: ILGPVPQASWSAKVRRESMLRQL*GWKWHR Trigger: CCTATGCCACTTCCATCCGCAAAGCTGTCTTAGCAT...GGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | AACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAATCTCCTGGGCCAGCTTaGAAGCATATTCAGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: NRSGFILGPVPQASWSAKSPGPA*KHIQQC Trigger: GCATTGCTGAATATGCTTTCAAGCTGGCCCAGGAGA...TTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | AGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAGATTTGTTTCAATGTTaGCCTTCAGGGCCACACGGT | + |
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Preference number: 4 (lower is better) Translates to: SGFILGPVPQASWSAKVRDLFQC*PSGPHG Trigger: ACCGTGTGGCCCTGAAGGGCAACATTGAAACAAATC...TCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTTACGCCCACTCTCCTaGGCCAGCTTGAAAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: FILGPVPQASWSAKVRRELRPLS*ASLKAY Trigger: ATATGCTTTCAAGCTGGCCCAGGAGAGTGGGCGTAA...CTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGGAGTGGAGCTTGAGGTaGTCTAGCATCATGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FILGPVPQASWSAKVRREEWSLR*SSIMQL Trigger: AAGCTGCATGATGCTAGACCACCTCAAGCTCCACTC...CTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | AGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAATACAGACTTAACATaGAACATGAGCTCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGFILGPVPQASWSAKVRNTDLT*NMSSGP Trigger: CGGCCCAGAGCTCATGTTGCATGTTAAGTCTGTATT...TCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGACTGCACAGACGTTGTTaGCAATGTTACCATAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GFILGPVPQASWSAKVRRLHRRC*QCYHRD Trigger: ATCTCTATGGTAACATTGTCAACAACGTCTGTGCAG...TCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | AACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAACCGGCACACATGCATaGCTGAATACAGACTTAACA | + |
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Preference number: 4 (lower is better) Translates to: NRSGFILGPVPQASWSAKTGTHA*LNTDLT Trigger: TGTTAAGTCTGTATTCAGGCATGCATGTGTGCCGGT...TTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | TTCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTAGCTGTCTCGAATACTaGATACACATGGCCATAGTT | + |
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Preference number: 4 (lower is better) Translates to: FWNRSGFILGPVPQASWSSCLEY*IHMAIV Trigger: AACTATGGCCATGTGTATGCAGTATTCGAGACAGCT...ACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTCTGGCCTCCAATATCTaGGGTATGCATATTTTCATT | + |
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Preference number: 4 (lower is better) Translates to: WNRSGFILGPVPQASWSALASNI*GMHIFI Trigger: AATGAAAATATGCATACCCCAGATATTGGAGGCCAG...AGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | AGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGGATGCGTTGGAGCTTACATaGACCTCTTCAAAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SAKVRRESYRQAEQNCRDALELT*TSSKST Trigger: GGTGGACTTTGAAGAGGTGCATGTAAGCTCCAACGC...ATCCCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR GCA 90 bp | AGCTGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAAGCATATTCAGCAATaGGCAGGGACTTGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SWSAKVRRESYRQAEQNCKHIQQ*AGTWLW Trigger: CCAAAGCCAAGTCCCTGCGCATTGCTGAATATGCTT...ACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | TGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGGATGGTGGCAGGTTATaGTTTGTTTCAATGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: WSAKVRRESYRQAEQNCRDGGRL*FVSMLP Trigger: GGGCAACATTGAAACAAATCATAACCTGCCACCATC...CCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR TCA 90 bp | TGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGTGTTTTCCCGTACAATaGGGATGTCTATGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WSAKVRRESYRQAEQNCRCFPVQ*GCLCPC Trigger: ACAAGGACATAGACATCCTCATTGTACGGGAAAACA...CCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGTCGAGATTTGTGGGATaGTGGCAGGTTATGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: WSAKVRRESYRQAEQNCRSRFVG*WQVMIC Trigger: ACAAATCATAACCTGCCACCATCCCACAAATCTCGA...CCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTATTTTCATTGTCCATaGATGCTAAGACAGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: FILGPVPQASWSAKVRREYFHCP*MLRQLC Trigger: GCAAAGCTGTCTTAGCATCCATGGACAATGAAAATA...CTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CCA 90 bp | TGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGAGATTTGTGGGATGGTaGCAGGTTATGATTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: WSAKVRRESYRQAEQNCRRFVGW*QVMICF Trigger: GAAACAAATCATAACCTGCCACCATCCCACAAATCT...CCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 90 bp | CATGGGCAGCCAGAACCTCCCAAGGACGGCAGAGGAGAGTTGGCTTaGGCATTGCCTTTGCAGCACCGCCAGCAGCTATCGCCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HGQPEPPKDGRGELA*ALPLQHRQQLSPPS Trigger: TGAAGGTGGCGATAGCTGCTGGCGGTGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCTGCCGTCCTTGGGAGGTTCTGGCTGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 90 bp | TTTCAATGTTGCCCTTCAGGGCCACACGGTTCCGGCGGATGGCCATaGTGGCATTGCGGATGTCCTCCTCATCAGCGTTGGAGCTTACAT | + |
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Preference number: 5 (lower is better) Translates to: FQCCPSGPHGSGGWP*WHCGCPPHQRWSLH Trigger: ATGTAAGCTCCAACGCTGATGAGGAGGACATCCGCAATGCCATCATGGCCATCCGCCGGAACCGTGTGGCCCTGAAGGGCAACATTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 90 bp | TGTCCTTGTGCCGGGTCACCACTCCTGGCAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCTAGGCTGGTGCGAAGGATGTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CPCAGSPLLAGSYSG*RWHRGLGWCEGCCF Trigger: GAAACAACATCCTTCGCACCAGCCTAGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTGCCAGGAGTGGTGACCCGGCACAAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | TGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTATGGCCATGATGGCATaGCGGATGTCCTCCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: WNRSGFILGPVPQASWSAMAMMA*RMSSSS Trigger: TGATGAGGAGGACATCCGCAATGCCATCATGGCCAT...AGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | CTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGAGAGTCCTACGCAATGCGCAGGGACTaGGCTTTGGTGATAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGPVPQASWSAKVRRESYAMRRD*ALVIIF Trigger: GAAGATTATCACCAAAGCCAAGTCCCTGCGCATTGC...GTAGGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGCAGAGGAGAGTTGGCTaGAGCATTGCCTTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TEVALFWVLSPKLAGVLKQRRVG*SIAFAA Trigger: TGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCTG...CTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | TGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTCTCTCCTGGGCCAGCTaGAAAGCATATTCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: WNRSGFILGPVPQASWSALSWAS*KAYSAM Trigger: CATTGCTGAATATGCTTTCAAGCTGGCCCAGGAGAG...AGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | GGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGACGCAGGGACTTGGCTTaGGTGATAATCTTCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GFILGPVPQASWSAKVRRRRDLA*VIIFKL Trigger: GAGCTTGAAGATTATCACCAAAGCCAAGTCCCTGCG...TCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 90 bp | ATACCAGCTGCATTGTTGTGTTGTCTACAATCATGCTGTCAAAGGTaGTCTGAGGGTAGTGGGCTGCTACTTCCCTGCAGCACTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: IPAALLCCLQSCCQR*SEGSGLLLPCSTGG Trigger: TCCTCCAGTGCTGCAGGGAAGTAGCAGCCCACTACCCTCAGATCACCTTTGACAGCATGATTGTAGACAACACAACAATGCAGCTGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGATGTTGTTTCGAGATTaGTGGGATGGTGGCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: SGTEVALFWVLSPKLAGVMLFRD*WDGGRL Trigger: TAACCTGCCACCATCCCACAAATCTCGAAACAACAT...CACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | AGCTGGAGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTCTAGCATCATGCAGCTaGCTAGCAGTGTGGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: SWSAKVRRESYRQAEQNCLASCS*LAVWQS Trigger: CGACTGCCACACTGCTAGCAAGCTGCATGATGCTAG...ACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACTCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | AGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGGATAGGATGTCTATGTCCTaGTGCCGGGTCACCACTCCT | + |
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Preference number: 5 (lower is better) Translates to: SAKVRRESYRQAEQNCRDRMSMS*CRVTTP Trigger: AGGAGTGGTGACCCGGCACAAGGACATAGACATCCT...ATCCCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | AACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGGCAGGTTATGATTaGTTTCAATGTTGCCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NRSGFILGPVPQASWSAKVAGYD*FQCCPS Trigger: TGAAGGGCAACATTGAAACAAATCATAACCTGCCAC...TTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | GGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAAAGTGAGAAGATTATTGGCAATACTTTaGCCTGTGTTCCTTGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: GFILGPVPQASWSAKVRRLLAIL*PVFLVA Trigger: AGCTACAAGGAACACAGGCAAAAGTATTGCCAATAA...TCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | TGGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTTTAGCAATGTTCTTATaGGCAATACTTTTGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: WNRSGFILGPVPQASWSALAMFL*AILLPV Trigger: CACAGGCAAAAGTATTGCCAATAAGAACATTGCTAA...AGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | GGAACAGAAGTGGCTTTATTCTGGGTCCTGTCCCCCAAGCTAGCTGGAGTGCTAGTATGCATATTTTCATaGTCCATGGATGCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: GTEVALFWVLSPKLAGVLVCIFS*SMDAKT Trigger: TGTCTTAGCATCCATGGACAATGAAAATATGCATAC...TAGCACTCCAGCTAGCTTGGGGGACAGGACCCAGAATAAAGCCACTTCTGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | AGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGGATCTGGTGCGAAGGATGTaGTTTCGAGATTTGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SAKVRRESYRQAEQNCRDLVRRM*FRDLWD Trigger: ATCCCACAAATCTCGAAACAACATCCTTCGCACCAG...ATCCCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS-3UTR CAA 90 bp | AGTGCTAAAGTGAGAAGAGAGTCCTACAGACAAGCTGAGCAAAACTGTAGGGATAGCTGCATTGTTGTGTaGTCTACAATCATGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SAKVRRESYRQAEQNCRDSCIVV*STIMLS Trigger: TGACAGCATGATTGTAGACAACACAACAATGCAGCT...ATCCCTACAGTTTTGCTCAGCTTGTCTGTAGGACTCTCTTCTCACTTTAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 72 bp | TGCCCTTCAGGGCCACACGGTTCCGGCGGATGGCCATaGTGGCATTGCGGATGTCCTCCTCATCAGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CPSGPHGSGGWP*WHCGCPPHQRW Trigger: CCAACGCTGATGAGGAGGACATCCGCAATGCCATCATGGCCATCCGCCGGAACCGTGTGGCCCTGAAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS GCA 72 bp | AGGACGGCAGAGGAGAGTTGGCTTGAGCATTGCCTTTaGAGCACCGCCAGCAGCTATCGCCACCTTCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RTAEESWLEHCL*STASSYRHLQR Trigger: GCGCTGAAGGTGGCGATAGCTGCTGGCGGTGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCTGCCGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 72 bp | CCAGAACCTCCCAAGGACGGCAGAGGAGAGTTGGCTTaGGCATTGCCTTTGCAGCACCGCCAGCAGCTATCG | + |
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Preference number: 6 (lower is better) Translates to: PEPPKDGRGELA*ALPLQHRQQLS Trigger: CGATAGCTGCTGGCGGTGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCTGCCGTCCTTGGGAGGTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 72 bp | GCCGGGTCACCACTCCTGGCAGGCTCTTACAGTGGATaGCGTTGGCATAGAGGTCTAGGCTGGTGCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGSPLLAGSYSG*RWHRGLGWCEG Trigger: TCCTTCGCACCAGCCTAGACCTCTATGCCAACGTCATCCACTGTAAGAGCCTGCCAGGAGTGGTGACCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 72 bp | GCCAGAACCTCCCAAGGACGGCAGAGGAGAGTTGGCTaGAGCATTGCCTTTGCAGCACCGCCAGCAGCTATC | + |
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Preference number: 6 (lower is better) Translates to: ARTSQGRQRRVG*SIAFAAPPAAI Trigger: GATAGCTGCTGGCGGTGCTGCAAAGGCAATGCTCAAGCCAACTCTCCTCTGCCGTCCTTGGGAGGTTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 72 bp | AGGGCCACACGGTTCCGGCGGATGGCCATGATGGCATaGCGGATGTCCTCCTCATCAGCGTTGGAGCTTACA | + |
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Preference number: 6 (lower is better) Translates to: RATRFRRMAMMA*RMSSSSALELT Trigger: TGTAAGCTCCAACGCTGATGAGGAGGACATCCGCAATGCCATCATGGCCATCCGCCGGAACCGTGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CCA 72 bp | GAGGATGTCTATGTCCTTGTGCCGGGTCACCACTCCTaGCAGGCTCTTACAGTGGATGACGTTGGCATAGAG | + |
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Preference number: 6 (lower is better) Translates to: EDVYVLVPGHHS*QALTVDDVGIE Trigger: CTCTATGCCAACGTCATCCACTGTAAGAGCCTGCCAGGAGTGGTGACCCGGCACAAGGACATAGACATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 72 bp | GCCATGATGGCATTGCGGATGTCCTCCTCATCAGCGTaGGAGCTTACATGCACCTCTTCAAAGTCCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: AMMALRMSSSSA*ELTCTSSKSTG Trigger: GCCGGTGGACTTTGAAGAGGTGCATGTAAGCTCCAACGCTGATGAGGAGGACATCCGCAATGCCATCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS GCA 72 bp | TTGCGGATGTCCTCCTCATCAGCGTTGGAGCTTACATaGACCTCTTCAAAGTCCACCGGCACACATGCATGC | + |
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Preference number: 6 (lower is better) Translates to: LRMSSSSALELT*TSSKSTGTHAC Trigger: GCATGCATGTGTGCCGGTGGACTTTGAAGAGGTGCATGTAAGCTCCAACGCTGATGAGGAGGACATCCGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS GCA 72 bp | GTGTTTTCCCGTACAATGAGGATGTCTATGTCCTTGTaGCGGGTCACCACTCCTGGCAGGCTCTTACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VFSRTMRMSMSL*RVTTPGRLLQW Trigger: CCACTGTAAGAGCCTGCCAGGAGTGGTGACCCGGCACAAGGACATAGACATCCTCATTGTACGGGAAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 90 bp | CCGTCCATTAATGATGCGGATATGACGAATGATGTCCTGGATGGCTaGGGATGTGGTGCCCTGGCCTCCAATATCTGGGGTATGCATATT | + |
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Preference number: 6 (lower is better) Translates to: PSINDADMTNDVLDG*GCGALASNIWGMHI Trigger: AATATGCATACCCCAGATATTGGAGGCCAGGGCACCACATCCCAAGCCATCCAGGACATCATTCGTCATATCCGCATCATTAATGGACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS TCA 72 bp | GCATTGTTGTGTTGTCTACAATCATGCTGTCAAAGGTaGTCTGAGGGTAGTGGGCTGCTACTTCCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALLCCLQSCCQR*SEGSGLLLPCS Trigger: GCTGCAGGGAAGTAGCAGCCCACTACCCTCAGATCACCTTTGACAGCATGATTGTAGACAACACAACAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 72 bp | GCTAGCAGTGTGGCAGTCGGGTTAGCAATGTTCTTATaGGCAATACTTTTGCCTGTGTTCCTTGTAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASSVAVGLAMFL*AILLPVFLVAV Trigger: GACAGCTACAAGGAACACAGGCAAAAGTATTGCCAATAAGAACATTGCTAACCCGACTGCCACACTGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 90 bp | AGCAGTGTGGCAGTCGGGTTAGCAATGTTCTTATTGGCAATACTTTaGCCTGTGTTCCTTGTAGCTGTCTCGAATACTGCATACACATGG | + |
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Preference number: 6 (lower is better) Translates to: SSVAVGLAMFLLAIL*PVFLVAVSNTAYTW Trigger: CCATGTGTATGCAGTATTCGAGACAGCTACAAGGAACACAGGCAAAAGTATTGCCAATAAGAACATTGCTAACCCGACTGCCACACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CCA 72 bp | CTCCAATATCTGGGGTATGCATATTTTCATTGTCCATaGATGCTAAGACAGCTTTGCGGATGGAAGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LQYLGYAYFHCP*MLRQLCGWKWH Trigger: ATGCCACTTCCATCCGCAAAGCTGTCTTAGCATCCATGGACAATGAAAATATGCATACCCCAGATATTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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| CDS CAA 72 bp | GCAGTCGGGTTAGCAATGTTCTTATTGGCAATACTTTaGCCTGTGTTCCTTGTAGCTGTCTCGAATACTGCA | + |
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Preference number: 6 (lower is better) Translates to: AVGLAMFLLAIL*PVFLVAVSNTA Trigger: TGCAGTATTCGAGACAGCTACAAGGAACACAGGCAAAAGTATTGCCAATAAGAACATTGCTAACCCGACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052761.9 |
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