Pregenerated sensors for IDH3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027406Ensembl transcript IDs: ENSMUST00000028892.11, ENSMUST00000184538.2, ENSMUST00000239288.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCTaGGGTTCGAACCTGTGGGAAAAAGTTATCATCTTAGGGTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DSFSEVMTCGITTHI*GSNLWEKVIILGSG Trigger: CCCAGACCCTAAGATGATAACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| 3UTR CCA 90 bp | AGCCTCAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTaGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: SLRKAIIVYCLDVLF*SIVLKGCIRSMVLL Trigger: CAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTGAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| 3UTR TCA 72 bp | CTTAGGGTCTGGGCCTTGTCGCAACAACCCACCCTTTaGGATACCCTTAACACCAGCCCCCAGGACAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: LRVWALSQQPTL*DTLNTSPQDSL Trigger: TAGGCTGTCCTGGGGGCTGGTGTTAAGGGTATCTCAAAGGGTGGGTTGTTGCGACAAGGCCCAGACCCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| 3UTR TCA 72 bp | AGTGAAGTCATGACATGTGGCATAACCACCCATATCTaGGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: SEVMTCGITTHI*GSNCLDVLFWS Trigger: GGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| 3UTR TCA 72 bp | AGTGAAGTCATGACATGTGGCATAACCACCCATATCTaGGGTTCGAACCTGTGGGAAAAAGTTATCATCTTA | + |
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Preference number: 3 (lower is better) Translates to: SEVMTCGITTHI*GSNLWEKVIIL Trigger: TAAGATGATAACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACTTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTCGAAGCATGGTCCTTTaGAAATTGGAGGGAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QKSYYSLLSRCSLLVHCTRSMVL*KLEGVR Trigger: CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCG...AGTACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| 3UTR CCA 72 bp | AAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTaGTCCATTGTACTGAAGGGATGTATACGAAGCATG | + |
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Preference number: 3 (lower is better) Translates to: KAIIVYCLDVLF*SIVLKGCIRSM Trigger: CATGCTTCGTATACATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | AGTCATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAACACTGCCTGGGCAAATaGGTGCCGAGCACCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SHDMWHNHPYLRFEPVGKHCLGK*VPSTRL Trigger: GAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTG...TTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATTTCCTGCCCACTGCCTaGGCAAATGGGTGCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGSNDSFSEVMTCGITTHFLPTA*ANGCRA Trigger: TGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAA...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCGCCTGGGCAAATGGGTaGCGAGCACCCGTCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHIAWANG*RAPVSK Trigger: TTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGC...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATTATATTCCTGCCCACTaGCTGGGCAAATGGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QGSNDSFSEVMTCGITTHYIPAH*LGKWVP Trigger: CGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATA...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCCGTCTCCAGGCAGCATaGTCACAGGAAAGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHIRLQAA*SQERHP Trigger: AGGGTGCCTTTCCTGTGACCATGCTGCCTGGAGACG...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATGCATGGCTGTGGGGTTaGCTATATTCCTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: QGSNDSFSEVMTCGITTHAWLWG*LYSCPL Trigger: CAGTGGGCAGGAATATAGCCAACCCCACAGCCATGC...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | CATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTGCCGCAGCATGTTGGTaGCCGACAGCAGCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HCTEGMYTKHGPFEIGGSAAACW*PTAAWL Trigger: CAGCCATGCTGCTGTCGGCCACCAACATGCTGCGGC...ACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | CCATATCTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGCCGCAGCATGTTGGTaGCCGACAGCAGCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PYLRFELSRCSLLVHCTEAAACW*PTAAWL Trigger: CAGCCATGCTGCTGTCGGCCACCAACATGCTGCGGC...TTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAGATATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGACACCCTCACATCTTGTaGCTGGCTCTGGGAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGHPHIL*LALGSG Trigger: GCCGCTTCCCAGAGCCAGGCACAAGATGTGAGGGTG...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | GGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGTATATTCCTGCCCACTGCCTaGGCAAATGGGTGCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GSNCLDVLFWSIVLKGCIFLPTA*ANGCRA Trigger: TGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAA...TATACATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | AGTCATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAATGGCCGACAGCAGCATaGCTGTGGGGTTGGCTATAT | + |
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Preference number: 4 (lower is better) Translates to: SHDMWHNHPYLRFEPVGKWPTAA*LWGWLY Trigger: ATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCA...TTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTTGCTCCGCCCTTTCTTaGTGGCATAGTCGAACGCAA | + |
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Preference number: 4 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSCSALS*WHSRTQ Trigger: TTGCGTTCGACTATGCCACCAAGAAAGGGCGGAGCA...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | CACCCATATCTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTTGGCCGACAGCAGCATaGCTGTGGGGTTGGCTATAT | + |
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Preference number: 4 (lower is better) Translates to: HPYLRFELSRCSLLVHCTWPTAA*LWGWLY Trigger: ATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCA...AGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAGATATGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGTATACCATGGGGGTGCAGGTaGCCGATGACAGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: GSNCLDVLFWSIVLKGCIPWGCR*PMTDLM Trigger: CATCAAGTCTGTCATCGGCCACCTGCACCCCCATGG...TATACATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTATGGAACTCAGCACCTaGTCCAGCTTCTCCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSMELST*SSFSSE Trigger: TTCTGAGGAGAAGCTGGAGCAGGTGCTGAGTTCCAT...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | GGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGTATAGCATGGCTGTGGGGTTaGCTATATTCCTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: GSNCLDVLFWSIVLKGCIAWLWG*LYSCPL Trigger: CAGTGGGCAGGAATATAGCCAACCCCACAGCCATGC...TATACATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR TCA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTCTTGTATCCAGGAAGTaGCTTCACGTGGACTACGTT | + |
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Preference number: 4 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSLVSRK*LHVDYV Trigger: AACGTAGTCCACGTGAAGTCACTTCCTGGATACAAG...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR TCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGATCTTCAGGCACTCAATaGCACCCTTGGCGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGSSGTQ*HPWRSH Trigger: ATGAGAGCGCCAAGGGTGTCATTGAGTGCCTGAAGA...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR TCA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATGCAATCATGCTGGAGTaGTACTCAAGATTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: QGSNDSFSEVMTCGITTHAIMLE*YSRLRC Trigger: GCATCTCAATCTTGAGTATCACTCCAGCATGATTGC...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | GTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAAGGACTTCCTCACAGCACTaGAAGAACAAGCCATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VLKGCIRSMVLLKLEGVRTSSQH*KNKPSP Trigger: AGGGGATGGCTTGTTCTTGCAGTGCTGTGAGGAAGT...CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCAAAAACTGCATACTCTaGACTGTAGCTCTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHIKNCIL*TVALPR Trigger: CCTGGGGAGAGCTACAGTGCAGAGTATGCAGTTTTT...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGTTGGCTATATTCCTaGCCACTGCCTGGGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGGWLYS*PLPGQM Trigger: CATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACC...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR TCA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTGCAATCATGCTGGAGTaGTACTCAAGATTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSAIMLE*YSRLRC Trigger: GCATCTCAATCTTGAGTATCACTCCAGCATGATTGC...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR TCA 90 bp | CTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGGTACCTTGCCAGCTTTaGTCACTTTCTTCACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LRFELSRCSLLVHCTEGMVPCQL*SLSSLH Trigger: ATGCAGTGAAGAAAGTGATCAAAGCTGGCAAGGTAC...CATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTGTCGAACGCAAACTTTaGAATCCTCTGAGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSVERKL*NPLRLG Trigger: ACCAAGTCTCAGAGGATTGCAAAGTTTGCGTTCGAC...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCGGAAGTGACTTCACGTaGACTACGTTGGCAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHIGSDFT*TTLANK Trigger: TTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCC...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CCA 90 bp | CTCAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTACCATGGGGGTGCAGGTaGCCGATGACAGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LRKAIIVYCLDVLFWSIVPWGCR*PMTDLM Trigger: CATCAAGTCTGTCATCGGCCACCTGCACCCCCATGG...TACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR TCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAAGTGATACTCAAGATTaGGATGCCGCAGCATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGSDTQD*DAAACW Trigger: CCAACATGCTGCGGCATCTCAATCTTGAGTATCACT...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR TCA 90 bp | GTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAAGGGTACCTTGCCAGCTTTaGTCACTTTCTTCACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VLKGCIRSMVLLKLEGVRVPCQL*SLSSLH Trigger: ATGCAGTGAAGAAAGTGATCAAAGCTGGCAAGGTAC...CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | GTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAAGGAGGTCTAGATTGTTGTaGCGAGTCTTGTATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLKGCIRSMVLLKLEGVRRSRLL*RVLYPG Trigger: TCCTGGATACAAGACTCGGCACAACAATCTAGACCT...CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CTCAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTATATATTCCTGCCCACTaGCTGGGCAAATGGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LRKAIIVYCLDVLFWSIVYIPAH*LGKWVP Trigger: CGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATA...TACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCCTGCATCTGCAATCATaGTGGAGTGATACTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHILHLQS*WSDTQD Trigger: ATCTTGAGTATCACTCCAGCATGATTGCAGATGCAG...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGCTGCATCTGCAATCATaGTGGAGTGATACTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LRFELSRCSLLVHCTEGMLHLQS*WSDTQD Trigger: ATCTTGAGTATCACTCCAGCATGATTGCAGATGCAG...CATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGGATCACTTTCTTCACTaGATCTGCAATCATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LRFELSRCSLLVHCTEGMDHFLH*ICNHAG Trigger: TCCAGCATGATTGCAGATGCAGTGAAGAAAGTGATC...CATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGTTTCTTCACTGCATCTaGAATCATGCTGGAGTGATA | + |
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Preference number: 4 (lower is better) Translates to: LRFELSRCSLLVHCTEGMFLHCI*NHAGVI Trigger: TATCACTCCAGCATGATTGCAGATGCAGTGAAGAAA...CATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR TCA 90 bp | AGTCATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAATATAGATCTTTCCAATaGTGGCAACTTTGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SHDMWHNHPYLRFEPVGKYRSFQ*WQLCSP Trigger: AGGAGAACAAAGTTGCCATCATTGGAAAGATCTATA...TTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR TCA 90 bp | CAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTAACTTTGCAATCCTCTaGGACTTGGTGCGAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: QKSYYSLLSRCSLLVHCTNFAIL*DLVRVT Trigger: CGTCACTCGCACCAAGTCTCAGAGGATTGCAAAGTT...AGTACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCGATTGTCAATTATGTTaGCATAGAGATTGGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHIDCQLC*HRDWAS Trigger: TGATGCCCAATCTCTATGGCAACATAATTGACAATC...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGATCACTTTCTTCACTaGATCTGCAATCATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGDHFLH*ICNHAG Trigger: TCCAGCATGATTGCAGATGCAGTGAAGAAAGTGATC...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCACCCTTATACTCCATTaGGGTATAGATCTTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSNDSFSEVMTCGITTHITLILH*GIDLSN Trigger: ATTGGAAAGATCTATACCCCAATGGAGTATAAGGGT...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CTCAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTATACTCCCCTTCTGTCTaGTCTCGAATGATAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRKAIIVYCLDVLFWSIVYSPSV*SRMITR Trigger: CCTGGTTATCATTCGAGAGCAGACAGAAGGGGAGTA...TACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGATTTCTTCACTGCATCTaGAATCATGCTGGAGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGFLHCI*NHAGVI Trigger: TATCACTCCAGCATGATTGCAGATGCAGTGAAGAAA...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS TCA 90 bp | GCACCCTCCACCCTCACATCTTGTGCCTGGCTCTGGGAAGCGGCGTaGGCCGTAGATGTTCCGAGACCTCTCCATGCCCCGGAGTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: APSTLTSCAWLWEAA*AVDVPRPLHAPEFR Trigger: TCGGAACTCCGGGGCATGGAGAGGTCTCGGAACATCTACGGCTCACGCCGCTTCCCAGAGCCAGGCACAAGATGTGAGGGTGGAGGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CCA 90 bp | GATGCCGCAGCATGTTGGTGGCCGACAGCAGCATGGCTGTGGGGTTaGCTATATTCCTGCCCACTGCCTGGGCAAATGGGTGCCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DAAACWWPTAAWLWG*LYSCPLPGQMGAEH Trigger: GTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCACCAACATGCTGCGGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 ENSMUST00000239288.2 |
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| CDS GCA 90 bp | AGGCAGCATGGTCACAGGAAAGGCACCCTCCACCCTCACATCTTGTaGCTGGCTCTGGGAAGCGGCGTGAGCCGTAGATGTTCCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RQHGHRKGTLHPHIL*LALGSGVSRRCSET Trigger: GGTCTCGGAACATCTACGGCTCACGCCGCTTCCCAGAGCCAGGCACAAGATGTGAGGGTGGAGGGTGCCTTTCCTGTGACCATGCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 90 bp | GCCCACTGCCTGGGCAAATGGGTGCCGAGCACCCGTCTCAAAAACTaGATACTCTGCACTGTAGCTCTCCCCAGGAACCACGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AHCLGKWVPSTRLKN*ILCTVALPRNHASS Trigger: GGAGCTGGCGTGGTTCCTGGGGAGAGCTACAGTGCAGAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS GCA 90 bp | GGCCGACAGCAGCATGGCTGTGGGGTTGGCTATATTCCTGCCCACTaGCTGGGCAAATGGGTGCCGAGCACCCGTCTCAAAAACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRQQHGCGVGYIPAH*LGKWVPSTRLKNCI Trigger: TATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 90 bp | TGTTGGTGGCCGACAGCAGCATGGCTGTGGGGTTGGCTATATTCCTaGCCACTGCCTGGGCAAATGGGTGCCGAGCACCCGTCTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CWWPTAAWLWGWLYS*PLPGQMGAEHPSQK Trigger: TTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCACCAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CCA 90 bp | CATGGCTGTGGGGTTGGCTATATTCCTGCCCACTGCCTGGGCAAATaGGTGCCGAGCACCCGTCTCAAAAACTGCATACTCTGCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HGCGVGYIPAHCLGK*VPSTRLKNCILCTV Trigger: TACAGTGCAGAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS GCA 90 bp | GACCTTGCTCCGCCCTTTCTTGGTGGCATAGTCGAACGCAAACTTTaGAATCCTCTGAGACTTGGTGCGAGTGACGATCTTCAGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: DLAPPFLGGIVERKL*NPLRLGASDDLQAL Trigger: GAGTGCCTGAAGATCGTCACTCGCACCAAGTCTCAGAGGATTGCAAAGTTTGCGTTCGACTATGCCACCAAGAAAGGGCGGAGCAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATCTCCACCCTCACATCTaGTGCCTGGCTCTGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGSNDSFSEVMTCGITTHLHPHI*CLALGS Trigger: GCTTCCCAGAGCCAGGCACAAGATGTGAGGGTGGAG...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTAGATGCCGCAGCATGTaGGTGGCCGACAGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSRCRSM*VADSSM Trigger: CATGCTGCTGTCGGCCACCAACATGCTGCGGCATCT...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAAGGGATGAGATGCCGCAGCATGTaGGTGGCCGACAGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRFELSRCSLLVHCTEGMRCRSM*VADSSM Trigger: CATGCTGCTGTCGGCCACCAACATGCTGCGGCATCT...CATCCCTTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS TCA 90 bp | TGCTCCAGCTTCTCCTCAGAAGCCATATTCTGCACCTCGCTCAGATaGTGCTCCTTAAATTCCACAGGGACAGCAGCAGCCTTGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: CSSFSSEAIFCTSLR*CSLNSTGTAAALNT Trigger: AGTGTTCAAGGCTGCTGCTGTCCCTGTGGAATTTAAGGAGCATCATCTGAGCGAGGTGCAGAATATGGCTTCTGAGGAGAAGCTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 90 bp | CCCTTGGCGCTCTCATGTTCCAGAGAGCTATACTCCCCTTCTGTCTaGTCTCGAATGATAACCAGGTCTAGATTGTTGTGCCGAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLALSCSRELYSPSV*SRMITRSRLLCRVL Trigger: CAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGGGGAGTATAGCTCTCTGGAACATGAGAGCGCCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS-3UTR CAA 90 bp | GGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATATCAGCATGGCTGTGGGGTaGGCTATATTCCTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GSNDSFSEVMTCGITTHISMAVG*AIFLPT Trigger: AGTGGGCAGGAATATAGCCAACCCCACAGCCATGCT...GATATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS GCA 90 bp | TTTCCAATGATGGCAACTTTGTTCTCCTTCATGGAACTCAGCACCTaGTCCAGCTTCTCCTCAGAAGCCATATTCTGCACCTCGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPMMATLFSFMELST*SSFSSEAIFCTSLR Trigger: TCTGAGCGAGGTGCAGAATATGGCTTCTGAGGAGAAGCTGGAGCAGGTGCTGAGTTCCATGAAGGAGAACAAAGTTGCCATCATTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 90 bp | TCCCCTTCTGTCTGCTCTCGAATGATAACCAGGTCTAGATTGTTGTaGCGAGTCTTGTATCCAGGAAGTGACTTCACGTGGACTACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSVCSRMITRSRLL*RVLYPGSDFTWTTL Trigger: CAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CCA 90 bp | TGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACGTGGACTACGTTaGCAAACAAATCCAACTTACGCCTCAGCTGCATATCATAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CAESCIQEVTSRGLR*QTNPTYASAAYHRR Trigger: CCTCCTATGATATGCAGCTGAGGCGTAAGTTGGATTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS-3UTR CAA 90 bp | CATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAGCATGGCTGTGGGGTaGGCTATATTCCTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HCTEGMYTKHGPFEIGGSSMAVG*AIFLPT Trigger: AGTGGGCAGGAATATAGCCAACCCCACAGCCATGCT...ACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCAGTAATGACAGCTTCAGTGAAGTCATGACATGTGGCATAACCACCCATCGTACCTTGCCAGCTTaGATCACTTTCTTCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSNDSFSEVMTCGITTHRTLPA*ITFFTA Trigger: TGCAGTGAAGAAAGTGATCAAAGCTGGCAAGGTACG...ATGGGTGGTTATGCCACATGTCATGACTTCACTGAAGCTGTCATTACTGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS CCA 90 bp | TCTAGATTGTTGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACGTaGACTACGTTGGCAAACAAATCCAACTTACGCCTCAGCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SRLLCRVLYPGSDFT*TTLANKSNLRLSCI Trigger: TATGCAGCTGAGGCGTAAGTTGGATTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS-3UTR CAA 90 bp | CATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAAGTTTGTTGTGCCGAGTCTaGTATCCAGGAAGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HDMWHNHPYLRFEPVGKSLLCRV*YPGSDF Trigger: GAAGTCACTTCCTGGATACAAGACTCGGCACAACAA...ACTTTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CACCCATATCTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTTCTCGAGTCCGTACCTaGCCAGCTTTGATCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPYLRFELSRCSLLVHCTSRVRT*PALITF Trigger: GAAAGTGATCAAAGCTGGCAAGGTACGGACTCGAGA...AGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAGATATGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS-3UTR CAA 90 bp | GTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAAGGTGGCCGATGACAGACTaGATGAAGTCAGTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLKGCIRSMVLLKLEGVRWPMTD*MKSVVV Trigger: CACCACAACTGACTTCATCAAGTCTGTCATCGGCCA...CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CAA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGATCTCGAGTCCGTACCTaGCCAGCTTTGATCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGSRVRT*PALITF Trigger: GAAAGTGATCAAAGCTGGCAAGGTACGGACTCGAGA...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CAA 90 bp | CATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTTGGCCGATGACAGACTaGATGAAGTCAGTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HCTEGMYTKHGPFEIGGSWPMTD*MKSVVV Trigger: CACCACAACTGACTTCATCAAGTCTGTCATCGGCCA...ACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 |
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| CDS-3UTR CAA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAACCAGGTCTAGATTGTaGTGCCGAGTCTTGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGTRSRL*CRVLYP Trigger: TGGATACAAGACTCGGCACAACAATCTAGACCTGGT...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | AGTCATGACATGTGGCATAACCACCCATATCTGAGGTTCGAACCTGTGGGAAAAATAACCAGGTCTAGATaGTTGTGCCGAGTCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SHDMWHNHPYLRFEPVGKITRSR*LCRVLY Trigger: ATACAAGACTCGGCACAACAATCTAGACCTGGTTAT...TTTTCCCACAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAGTCGAACGCAAACTTaGCAATCCTCTGAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCTEGMYTKHGPFEIGGSSRTQT*QSSETW Trigger: CCAAGTCTCAGAGGATTGCAAAGTTTGCGTTCGACT...ACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CCATATCTGAGGTTCGAACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTGAACGTACCTTGCCAGCTTaGATCACTTTCTTCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PYLRFELSRCSLLVHCTERTLPA*ITFFTA Trigger: TGCAGTGAAGAAAGTGATCAAAGCTGGCAAGGTACG...TTCAGTACAATGGACCAGAAGAGAACATCTAGACAGTTCGAACCTCAGATATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184538.2 |
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| CDS GCA 90 bp | TCAAACTTGATTTTAGGGTACAGTTCAGCAACTTCCTCACAGCACTaGAAGAACAAGCCATCCCCTAGTTTCATGATGTTGGCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: SNLILGYSSATSSQH*KNKPSPSFMMLALW Trigger: CCATAAAGCCAACATCATGAAACTAGGGGATGGCTTGTTCTTGCAGTGCTGTGAGGAAGTTGCTGAACTGTACCCTAAAATCAAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS-3UTR CAA 90 bp | GTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAGGGAGTAAGGCACCCTTATACTCCATaGGGGTATAGATCTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLKGCIRSMVLLKLEGVRHPYTP*GYRSFQ Trigger: TTGGAAAGATCTATACCCCAATGGAGTATAAGGGTG...CCTTACTCCCTCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CTGGTCCATTGTACTGAAGGGATGTATACGAAGCATGGTCCTTTTGAAATTGGAAGCTGCATGCAGCAGTaGTCTATGATCATGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVHCTEGMYTKHGPFEIGSCMQQ*SMIMVS Trigger: TGAAACCATGATCATAGACAACTGCTGCATGCAGCT...TCCAATTTCAAAAGGACCATGCTTCGTATACATCCCTTCAGTACAATGGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
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| CDS-3UTR CAA 90 bp | CAGAAAAGCTATTATAGTCTACTGTCTAGATGTTCTCTTCTGGTCCATTGTACTCCTAGTTTCATGATGTaGGCTTTATGGACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QKSYYSLLSRCSLLVHCTPSFMM*ALWTAV Trigger: CACAGCCGTCCATAAAGCCAACATCATGAAACTAGG...AGTACAATGGACCAGAAGAGAACATCTAGACAGTAGACTATAATAGCTTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028892.11 |
||
| CDS CAA 90 bp | AGATGCCGCAGCATGTTGGTGGCCGACAGCAGCATGGCTGTGGGGTaGGCTATATTCCTGCCCACTGCCTGGGCAAATGGGTGCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCRSMLVADSSMAVG*AIFLPTAWANGCRA Trigger: TGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCACCAACATGCTGCGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 ENSMUST00000239288.2 |
||
| CDS GCA 72 bp | GGTCACAGGAAAGGCACCCTCCACCCTCACATCTTGTaGCTGGCTCTGGGAAGCGGCGTGAGCCGTAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GHRKGTLHPHIL*LALGSGVSRRC Trigger: ACATCTACGGCTCACGCCGCTTCCCAGAGCCAGGCACAAGATGTGAGGGTGGAGGGTGCCTTTCCTGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS GCA 72 bp | TGGGTGCCGAGCACCCGTCTCAAAAACTGCATACTCTaGACTGTAGCTCTCCCCAGGAACCACGCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WVPSTRLKNCIL*TVALPRNHASS Trigger: GGAGCTGGCGTGGTTCCTGGGGAGAGCTACAGTGCAGAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS GCA 72 bp | CAGCATGGCTGTGGGGTTGGCTATATTCCTGCCCACTaGCTGGGCAAATGGGTGCCGAGCACCCGTCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QHGCGVGYIPAH*LGKWVPSTRLK Trigger: TTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS CCA 72 bp | GCATGTTGGTGGCCGACAGCAGCATGGCTGTGGGGTTaGCTATATTCCTGCCCACTGCCTGGGCAAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ACWWPTAAWLWG*LYSCPLPGQMG Trigger: ACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCACCAACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 ENSMUST00000239288.2 |
||
| CDS CAA 72 bp | AGCATGTTGGTGGCCGACAGCAGCATGGCTGTGGGGTaGGCTATATTCCTGCCCACTGCCTGGGCAAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SMLVADSSMAVG*AIFLPTAWANG Trigger: CCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCCACAGCCATGCTGCTGTCGGCCACCAACATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028892.11 ENSMUST00000184538.2 ENSMUST00000239288.2 |
||
| CDS GCA 72 bp | CTGGGCAAATGGGTGCCGAGCACCCGTCTCAAAAACTaGATACTCTGCACTGTAGCTCTCCCCAGGAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGKWVPSTRLKN*ILCTVALPRNH Trigger: GTGGTTCCTGGGGAGAGCTACAGTGCAGAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS CCA 72 bp | GGGGTTGGCTATATTCCTGCCCACTGCCTGGGCAAATaGGTGCCGAGCACCCGTCTCAAAAACTGCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: GVGYIPAHCLGK*VPSTRLKNCIL Trigger: GAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
||
| CDS GCA 72 bp | TTGGCTATATTCCTGCCCACTGCCTGGGCAAATGGGTaGCGAGCACCCGTCTCAAAAACTGCATACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LAIFLPTAWANG*RAPVSKTAYSA Trigger: TGCAGAGTATGCAGTTTTTGAGACGGGTGCTCGGCACCCATTTGCCCAGGCAGTGGGCAGGAATATAGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 72 bp | GTGCGAGTGACGATCTTCAGGCACTCAATGACACCCTaGGCGCTCTCATGTTCCAGAGAGCTATACTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRVTIFRHSMTP*ALSCSRELYSP Trigger: AGGGGAGTATAGCTCTCTGGAACATGAGAGCGCCAAGGGTGTCATTGAGTGCCTGAAGATCGTCACTCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 90 bp | TCCTCACAGCACTGCAAGAACAAGCCATCCCCTAGTTTCATGATGTaGGCTTTATGGACGGCTGTGACCTTGCTCCGCCCTTTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSQHCKNKPSPSFMM*ALWTAVTLLRPFLV Trigger: CACCAAGAAAGGGCGGAGCAAGGTCACAGCCGTCCATAAAGCCAACATCATGAAACTAGGGGATGGCTTGTTCTTGCAGTGCTGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS TCA 72 bp | TTCTCCTCAGAAGCCATATTCTGCACCTCGCTCAGATaGTGCTCCTTAAATTCCACAGGGACAGCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FSSEAIFCTSLR*CSLNSTGTAAA Trigger: GGCTGCTGCTGTCCCTGTGGAATTTAAGGAGCATCATCTGAGCGAGGTGCAGAATATGGCTTCTGAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 72 bp | CCGCCCTTTCTTGGTGGCATAGTCGAACGCAAACTTTaGAATCCTCTGAGACTTGGTGCGAGTGACGATCTT | + |
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Preference number: 6 (lower is better) Translates to: PPFLGGIVERKL*NPLRLGASDDL Trigger: AAGATCGTCACTCGCACCAAGTCTCAGAGGATTGCAAAGTTTGCGTTCGACTATGCCACCAAGAAAGGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 90 bp | TACTCCCCTTCTGTCTGCTCTCGAATGATAACCAGGTCTAGATTGTaGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACGTGGACTACG | + |
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Preference number: 6 (lower is better) Translates to: YSPSVCSRMITRSRL*CRVLYPGSDFTWTT Trigger: CGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGGGGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS GCA 72 bp | GTCTGCTCTCGAATGATAACCAGGTCTAGATTGTTGTaGCGAGTCTTGTATCCAGGAAGTGACTTCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: VCSRMITRSRLL*RVLYPGSDFTW Trigger: CCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CCA 72 bp | TTGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACGTaGACTACGTTGGCAAACAAATCCAACTTACGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LCRVLYPGSDFT*TTLANKSNLRL Trigger: GAGGCGTAAGTTGGATTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 90 bp | CTATACTCCCCTTCTGTCTGCTCTCGAATGATAACCAGGTCTAGATaGTTGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LYSPSVCSRMITRSR*LCRVLYPGSDFTWT Trigger: AGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGGGGAGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 90 bp | GTCTGCTCTCGAATGATAACCAGGTCTAGATTGTTGTGCCGAGTCTaGTATCCAGGAAGTGACTTCACGTGGACTACGTTGGCAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: VCSRMITRSRLLCRV*YPGSDFTWTTLANK Trigger: TTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS TCA 72 bp | AACCACCCATATCTGAGGTTCGAACCTTGCCAGCTTTaGTCACTTTCTTCACTGCATCTGCAATCATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NHPYLRFEPCQL*SLSSLHLQSCW Trigger: CCAGCATGATTGCAGATGCAGTGAAGAAAGTGATCAAAGCTGGCAAGGTTCGAACCTCAGATATGGGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239288.2 |
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| CDS GCA 72 bp | CTCTCATGTTCCAGAGAGCTATACTCCCCTTCTGTCTaGTCTCGAATGATAACCAGGTCTAGATTGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LSCSRELYSPSV*SRMITRSRLLC Trigger: GCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGGGGAGTATAGCTCTCTGGAACATGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 72 bp | GTCTTGTATCCAGGAAGTGACTTCACGTGGACTACGTaGGCAAACAAATCCAACTTACGCCTCAGCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: VLYPGSDFTWTT*ANKSNLRLSCI Trigger: TATGCAGCTGAGGCGTAAGTTGGATTTGTTTGCCAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 72 bp | CGAATGATAACCAGGTCTAGATTGTTGTGCCGAGTCTaGTATCCAGGAAGTGACTTCACGTGGACTACGTTG | + |
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Preference number: 6 (lower is better) Translates to: RMITRSRLLCRV*YPGSDFTWTTL Trigger: CAACGTAGTCCACGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 72 bp | TCTGTCTGCTCTCGAATGATAACCAGGTCTAGATTGTaGTGCCGAGTCTTGTATCCAGGAAGTGACTTCACG | + |
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Preference number: 6 (lower is better) Translates to: SVCSRMITRSRL*CRVLYPGSDFT Trigger: CGTGAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS CAA 72 bp | CCTTCTGTCTGCTCTCGAATGATAACCAGGTCTAGATaGTTGTGCCGAGTCTTGTATCCAGGAAGTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: PSVCSRMITRSR*LCRVLYPGSDF Trigger: GAAGTCACTTCCTGGATACAAGACTCGGCACAACAATCTAGACCTGGTTATCATTCGAGAGCAGACAGAAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028892.11 ENSMUST00000239288.2 |
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| CDS TCA 72 bp | AGTGAAGTCATGACATGTGGCATAACCACCCATATCTaGGGTTCGAACCTTGCCAGCTTTGATCACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SEVMTCGITTHI*GSNLASFDHFL Trigger: AAGAAAGTGATCAAAGCTGGCAAGGTTCGAACCTCAGATATGGGTGGTTATGCCACATGTCATGACTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239288.2 |
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