Pregenerated sensors for IDH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030541Ensembl transcript IDs: ENSMUST00000107384.10, ENSMUST00000125542.3, ENSMUST00000134328.8, ENSMUST00000206714.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTaGGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: AVRPTLCHVQSTHWS*VVSTPTACPELCPG Trigger: ACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR TCA 90 bp | TGGTACTGGTGGGCCGGCCCTTCTGGTGTTCTCGGTAATGGCGGGTaGCTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAG | + |
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Preference number: 1 (lower is better) Translates to: WYWWAGPSGVLGNGG*LSHEQPQPQLSSHQ Trigger: CTGATGGGAAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTACCGAGAACACCAGAAGGGCCGGCCCACCAGTACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR GCA 90 bp | ATACAGCCAGCCAGGTCCTTGGTCATCGCTCCGCTCTCCACAGTCTaGACGCACACCTTCTCCAGCGTCTGTGCAAACCTGATAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: IQPARSLVIAPLSTV*THTFSSVCANLIRS Trigger: GGACCTTATCAGGTTTGCACAGACGCTGGAGAAGGTGTGCGTGCAGACTGTGGAGAGCGGAGCGATGACCAAGGACCTGGCTGGCTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR GCA 90 bp | TGTGCAAACCTGATAAGGTCCTGGTTCCCATCCAGCTTCCCACGATaGTCCAGACCCCGTGTCCAGGCAAAGATGCTGGCAATAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: CANLIRSWFPSSFPR*SRPRVQAKMLAIGL Trigger: CAACCCTATTGCCAGCATCTTTGCCTGGACACGGGGTCTGGAGCATCGTGGGAAGCTGGATGGGAACCAGGACCTTATCAGGTTTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR GCA 90 bp | CCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCCTACTaGTTGCCCAGAGCTCTGTCCAGGTTGCTCTTAATGGTGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PCTEYPLELSSVHPY*LPRALSRLLLMVSR Trigger: CCTGGACACCATTAAGAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR CAA 90 bp | TTCAGCTTCACATTGCTGAGGCCATGGATACAGCCAGCCAGGTCCTaGGTCATCGCTCCGCTCTCCACAGTCTGCACGCACACCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FSFTLLRPWIQPARS*VIAPLSTVCTHTFS Trigger: GGAGAAGGTGTGCGTGCAGACTGTGGAGAGCGGAGCGATGACCAAGGACCTGGCTGGCTGTATCCATGGCCTCAGCAATGTGAAGCTGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGTCGATGAGCGAAGACTTGAGCACCTaGGCCACCATGTCGTCGATG | + |
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Preference number: 2 (lower is better) Translates to: HTKPPEDLSTWATMSSMSEDLST*ATMSSM Trigger: CATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTC...GCTCATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCAGAAGACTTGAGCACCTaGGCCACCATGTCGTCGATG | + |
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Preference number: 2 (lower is better) Translates to: LSHEQPQPQLSSHQGRPAEDLST*ATMSSM Trigger: CATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTC...TGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCATGGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCGGTAATGGCGGGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTAGGGAGCCAAAGCCTTaGGCCAGGATGTCAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: FSVMAGDCPMSSLSLNCLREPKP*ARMSDC Trigger: GCAGTCTGACATCCTGGCTCAAGGCTTTGGCTCCCT...AAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTACCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR CAA 90 bp | CTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGTaGCTCTTAATGGTGTCCAGGAAGTCTGTGGTGTTCAGGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSSVHPYCLPRALSR*LLMVSRKSVVFRKC Trigger: GCACTTCCTGAACACCACAGACTTCCTGGACACCATTAAGAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR CAA 90 bp | TGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTaGCCCAGAGCTCTGTCCAGGTTGCTCTTAATGGTGTCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CTEYPLELSSVHPYC*PRALSRLLLMVSRK Trigger: CTTCCTGGACACCATTAAGAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR-3UTR TCA 90 bp | GTAATGGCGGGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCGCCTCATGTCCACCGTaGGGGAAAATGCTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: VMAGDCPMSSLSLNCLPIASCPP*GKMLIY Trigger: GTATATGAGCATTTTCCCTCACGGTGGACATGAGGC...GATGGGAAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGTTGCTCTTAATGGTGTCCAGGAAGTCTGTGGTGTTCAGGAAGTGCTCCCACCATGTCGTCGATaGGCCGATGTTCATACCAGA | + |
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Preference number: 2 (lower is better) Translates to: VQVALNGVQEVCGVQEVLPPCRR*ADVHTR Trigger: TCTGGTATGAACATCGGCTCATCGACGACATGGTGG...GAGCACTTCCTGAACACCACAGACTTCCTGGACACCATTAAGAGCAACCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTCATCAGGCCGAGGGAGCCAAAGCCTAGCTTTCATGAGGCCGTATATATACCACCATGTCGTCGATaGGCCGATGTTCATACCAGA | + |
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Preference number: 2 (lower is better) Translates to: DVIRPREPKPSFHEAVYIPPCRR*ADVHTR Trigger: TCTGGTATGAACATCGGCTCATCGACGACATGGTGG...TATATATACGGCCTCATGAAAGCTAGGCTTTGGCTCCCTCGGCCTGATGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125542.3 |
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| 3UTR-3UTR CCA 90 bp | AGATGTCATCAGGCCGAGGGAGCCAAAGCCTTGAGCCAGGATGTCAGACTGCACTTGTCAAAGATCTCCTaGAAGATGTCCTTGAAACGC | + |
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Preference number: 2 (lower is better) Translates to: RCHQAEGAKALSQDVRLHLSKIS*KMSLKR Trigger: GCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAA...GTGCAGTCTGACATCCTGGCTCAAGGCTTTGGCTCCCTCGGCCTGATGACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR GCA 72 bp | GCCAGGTCCTTGGTCATCGCTCCGCTCTCCACAGTCTaGACGCACACCTTCTCCAGCGTCTGTGCAAACCTG | + |
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Preference number: 3 (lower is better) Translates to: ARSLVIAPLSTV*THTFSSVCANL Trigger: CAGGTTTGCACAGACGCTGGAGAAGGTGTGCGTGCAGACTGTGGAGAGCGGAGCGATGACCAAGGACCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR TCA 72 bp | CCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTaGGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PTLCHVQSTHWS*VVSTPTACPEL Trigger: GAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134328.8 ENSMUST00000206714.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTGAGGGAGCCAAAGCCTaGAGCCAGGATGTCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: MSSLSLNCLPIRADQHRCEGAKA*SQDVRL Trigger: CAGTCTGACATCCTGGCTCAAGGCTTTGGCTCCCTC...ACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| 3UTR GCA 72 bp | GAGTACCCACTGGAGCTGAGTAGTGTCCACCCCTACTaGTTGCCCAGAGCTCTGTCCAGGTTGCTCTTAATG | + |
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Preference number: 3 (lower is better) Translates to: EYPLELSSVHPY*LPRALSRLLLM Trigger: CATTAAGAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR GCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCTGAGCCCGAGGCTCTaGAGAGCGAGCTCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSLSPRL*RASSQP Trigger: GGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGTTGCTGAGCCCGAGGCTCTaGAGAGCGAGCTCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LELSSVHPYCLPRALSRLLSPRL*RASSQP Trigger: GGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAG...CAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134328.8 ENSMUST00000206714.2 |
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| CDS-3UTR TCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCGTGCCTGCCAATGGTaGTGGGCTTGGTCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHRACQW*WAWSSQ Trigger: CTGGCTGGACCAAGCCCATCACCATTGGCAGGCACG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTGGTCGCCATGGGCGTaGCTGCCAATGGTGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHWSPWA*LPMVMG Trigger: GCCCATCACCATTGGCAGGCACGCCCATGGCGACCA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| 3UTR CAA 72 bp | AGACCCCGTGTCCAGGCAAAGATGCTGGCAATAGGGTaGGTACTGGTGGGCCGGCCCTTCTGGTGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RPRVQAKMLAIG*VLVGRPFWCSR Trigger: CCGAGAACACCAGAAGGGCCGGCCCACCAGTACCAACCCTATTGCCAGCATCTTTGCCTGGACACGGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR TCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCTCGGTAATGGCGGGTaGCTGTCCCATGAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSLGNGG*LSHEQP Trigger: AGGCTGCTCATGGGACAGTCACCCGCCATTACCGAG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR GCA 90 bp | CTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTTGCTGAGCCCGAGGCTCTaGAGAGCGAGCTCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LPCTEYPLELSSVHPYCLLSPRL*RASSQP Trigger: GGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAG...CAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134328.8 ENSMUST00000206714.2 |
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| CDS-3UTR GCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTCCAGCTTCCCACGATaGTCCAGACCCCGTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSSSFPR*SRPRVQ Trigger: CTGGACACGGGGTCTGGAGCATCGTGGGAAGCTGGA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCGCTCTCCACAGTCTaGACGCACACCTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHPLSTV*THTFSS Trigger: GCTGGAGAAGGTGTGCGTGCAGACTGTGGAGAGCGG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR GCA 90 bp | CCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGCCCCAGGCTGAAAACTaGCACTCTGCCATGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLELSSVHPYCLPRALSRPQAEN*HSAMVP Trigger: TGGGACCATGGCAGAGTGGCAGTTTTCAGCCTGGGG...CCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTCTGTGGCCTTGTACTaGTCGCCATGGGCGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSSVALY*SPWACL Trigger: CAGGCACGCCCATGGCGACCAGTACAAGGCCACAGA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | CACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGTCGATGAGCTCTGTGGCCTTGTACTaGTCGCCATGGGCGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTKPPEDLSTWATMSSMSSVALY*SPWACL Trigger: CAGGCACGCCCATGGCGACCAGTACAAGGCCACAGA...GCTCATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | AGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGTCGATTCTGTGGCCTTGTACTaGTCGCCATGGGCGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPHKATGRLEHLGHHVVDSVALY*SPWACL Trigger: CAGGCACGCCCATGGCGACCAGTACAAGGCCACAGA...ATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACAGCCAGCCAGGTCCTTaGTCATCGCTCCGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHSQPGP*SSLRSP Trigger: TGGAGAGCGGAGCGATGACCAAGGACCTGGCTGGCT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCACTGCCACTCTGCCATaGTCCCAGGGCCAGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSLNCLPIRADQHRCHQATATLP*SQGQGQ Trigger: CTGGCCCTGGCCCTGGGACCATGGCAGAGTGGCAGT...GGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR TCA 90 bp | TCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCGTGCCTGCCAATGGTaGTGGGCTTGGTCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIVFPSGQTSTDVIRPRERACQW*WAWSSQ Trigger: CTGGCTGGACCAAGCCCATCACCATTGGCAGGCACG...CTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR TCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTAGGGAGCCAAAGCCTTaGGCCAGGATGTCAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSREPKP*ARMSDC Trigger: GCAGTCTGACATCCTGGCTCAAGGCTTTGGCTCCCT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR GCA 90 bp | CAGGAAGTGCTCGTTCAGCTTCACATTGCTGAGGCCATGGATACAGCCAGCCAGTGGTCGCCATGGGCGTaGCTGCCAATGGTGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: QEVLVQLHIAEAMDTASQWSPWA*LPMVMG Trigger: GCCCATCACCATTGGCAGGCACGCCCATGGCGACCA...CTGGCTGGCTGTATCCATGGCCTCAGCAATGTGAAGCTGAACGAGCACTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTTGTACTGGTCGCCATaGGCGTGCCTGCCAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHLYWSP*ACLPMV Trigger: CACCATTGGCAGGCACGCCCATGGCGACCAGTACAA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR TCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCTGGAAGATGTCCTTaGAACGCCCGTCATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHPGRCP*NARHRP Trigger: AGGCCTATGACGGGCGTTTCAAGGACATCTTCCAGG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTACTGGAAGCAGCTGTaGGCGAAGCCCGAAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHYWKQL*AKPEMD Trigger: GTCCATTTCGGGCTTCGCGCACAGCTGCTTCCAGTA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR GCA 90 bp | GAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGTTGCTCTACTGGAAGCAGCTGTaGGCGAAGCCCGAAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: ELSSVHPYCLPRALSRLLYWKQL*AKPEMD Trigger: GTCCATTTCGGGCTTCGCGCACAGCTGCTTCCAGTA...GAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACGCCACACTGTACTTCTaGGTGGCCAGAGCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHATLYF*VARAES Trigger: TGACTCTGCTCTGGCCACCCAGAAGTACAGTGTGGC...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | TTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGGCCACACTGTACTTCTaGGTGGCCAGAGCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LQAHTKPPEDLSTWATMSATLYF*VARAES Trigger: TGACTCTGCTCTGGCCACCCAGAAGTACAGTGTGGC...CGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGAAGACTTGAGCACCTaGGCCACCATGTCGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSEDLST*ATMSSM Trigger: CATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTACATTGCTGAGGCCATaGATACAGCCAGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSTLLRP*IQPARS Trigger: GGACCTGGCTGGCTGTATCCATGGCCTCAGCAATGT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS-3UTR TCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCGGCTTCTCCACCTTaGTCCTCTTCTCAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHPASPP*SSSQHS Trigger: ACTATGCTGAGAAGAGGATCAAGGTGGAGAAGCCGG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCCACCATGTCGTCGATaGGCCGATGTTCATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSPPCRR*ADVHTR Trigger: TCTGGTATGAACATCGGCTCATCGACGACATGGTGG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTCAGCTTCACATTGCTaGGGCCATGGATACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHSASHC*GHGYSQ Trigger: CTGGCTGTATCCATGGCCTCAGCAATGTGAAGCTGA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR GCA 90 bp | ATCATAGTTTTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCTGGTCGCCATGGGCGTaGCTGCCAATGGTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIVFASPHKATGRLEHLGWSPWA*LPMVMG Trigger: GCCCATCACCATTGGCAGGCACGCCCATGGCGACCA...GCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAAAACTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTACCTGGTCATTGGTCTaGTCACGGTTTGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSTWSLV*SRFGSP Trigger: TGGGCTTCCAAACCGTGACCAGACCAATGACCAGGT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCAAAGCCTACCTGGTCATTGGTCTaGTCACGGTTTGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSGQTSTDVIRPREPKPTWSLV*SRFGSP Trigger: TGGGCTTCCAAACCGTGACCAGACCAATGACCAGGT...AGGCTTTGGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGAGTCAATGGTGACCTaGTCATTGGTCTGGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSESMVT*SLVWSR Trigger: CCGTGACCAGACCAATGACCAGGTCACCATTGACTC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCACTGTACTTCTGGGTaGCCAGAGCAGAGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSHCTSG*PEQSQW Trigger: CCATTGACTCTGCTCTGGCCACCCAGAAGTACAGTG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTTGTACTGGTCGCCATaGGCGTGCCTGCCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLQAHTKPPEDLSTWATMLYWSP*ACLPMV Trigger: CACCATTGGCAGGCACGCCCATGGCGACCAGTACAA...CATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCAGCTTCCCACGATGCTCCAGACCCCGTGTCCAGGCAAAGATGCTGGCATCAGAATGGTGTTCTTaGTGCTCAAGTAGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSSFPRCSRPRVQAKMLASEWCS*CSSRAA Trigger: GGCCGCTCTACTTGAGCACCAAGAACACCATTCTGA...TGCCAGCATCTTTGCCTGGACACGGGGTCTGGAGCATCGTGGGAAGCTGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCCGGCTTCTCCACCTTaGTCCTCTTCTCAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEYPLELSSVHPYCLPRAPASPP*SSSQHS Trigger: ACTATGCTGAGAAGAGGATCAAGGTGGAGAAGCCGG...AGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTACTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCTTCTCCAGCGTCTGTaGAAACCTGATAAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHLLQRL*KPDKVL Trigger: CAGGACCTTATCAGGTTTGCACAGACGCTGGAGAAG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CCA 90 bp | GGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACGAGTCAATGGTGACCTaGTCATTGGTCTGGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GDCPMSSLSLNCLPIRADESMVT*SLVWSR Trigger: CCGTGACCAGACCAATGACCAGGTCACCATTGACTC...GTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGCACTGTACTTCTGGGTaGCCAGAGCAGAGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLSSHQGRPAQMSSGRGHCTSG*PEQSQW Trigger: CCATTGACTCTGCTCTGGCCACCCAGAAGTACAGTG...CCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTCAGAATGGTGTTCTTaGTGCTCAAGTAGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSSEWCS*CSSRAA Trigger: GGCCGCTCTACTTGAGCACCAAGAACACCATTCTGA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACAACCTGATAAGGTCCTaGTTCCCATCCAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHNLIRS*FPSSFP Trigger: TGGGAAGCTGGATGGGAACCAGGACCTTATCAGGTT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTGTCCAGGAAGTCTGTaGTGTTCAGGAAGTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSCPGSL*CSGSAR Trigger: ACGAGCACTTCCTGAACACCACAGACTTCCTGGACA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| 3UTR CAA 72 bp | TACCCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTaGCCCAGAGCTCTGTCCAGGTTGCTCTTAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPLELSSVHPYC*PRALSRLLLMV Trigger: CACCATTAAGAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | TCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCGGCTTCTCCACCTTaGTCCTCTTCTCAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIVFPSGQTSTDVIRPREPASPP*SSSQHS Trigger: ACTATGCTGAGAAGAGGATCAAGGTGGAGAAGCCGG...CTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTACATTTTCTTCAGCTTaGACTCTTCCACACGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSTFSSA*TLPHGP Trigger: AGGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTTCTCCTTGATGAACTaGCAGATGATCCGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHFSLMN*QMIRVI Trigger: GATGACCCGGATCATCTGGCAGTTCATCAAGGAGAA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACGAATGGTGTTCTTGGTaGTCAAGTAGAGCGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHEWCSW*SSRAAI Trigger: AATGGCCGCTCTACTTGAGCACCAAGAACACCATTC...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGGTCTGGTCACGGTTTaGAAGCCCAAGGTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSGLVTV*KPKVKI Trigger: TATTTTGACCTTGGGCTTCCAAACCGTGACCAGACC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGCCACACTGTACTTCTaGGTGGCCAGAGCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQPQLSSHQGRPAQMSSATLYF*VARAES Trigger: TGACTCTGCTCTGGCCACCCAGAAGTACAGTGTGGC...TGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCTACCACAAAATCTGTaGCCTTGTACTGGTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSLPQNL*PCTGRH Trigger: ATGGCGACCAGTACAAGGCCACAGATTTTGTGGTAG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGTCGATCTACCACAAAATCTGTaGCCTTGTACTGGTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHKATGRLEHLGHHVVDLPQNL*PCTGRH Trigger: ATGGCGACCAGTACAAGGCCACAGATTTTGTGGTAG...ATCGACGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTACTGCTGCCATCCTTTaGGGTGAAGACCAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSTAAIL*GEDQLE Trigger: TTCAAGTTGGTCTTCACCCCAAAGGATGGCAGCAGT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACAGCGGCCATTTCTTCTaGATAGAGTACTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAHPLPCTEYPLELSSVHSGHFF*IEYWKQ Trigger: CTGCTTCCAGTACTCTATCCAGAAGAAATGGCCGCT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCAAAGCAGCGGCCATTTCTTCTaGATAGAGTACTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHQGRPAQMSSGRGSQSSGHFF*IEYWKQ Trigger: CTGCTTCCAGTACTCTATCCAGAAGAAATGGCCGCT...GCTTTGGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCAAGGTCAAAATACTTaGGCTGAACATCCACGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSQGQNT*AEHPRE Trigger: CTCACGTGGATGTTCAGCTCAAGTATTTTGACCTTG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGGTCCTGGTTCCCATCCAGCTTCCCACGATGCTCCAGACCCCGTGTCCAGCAAGGTCAAAATACTTaGGCTGAACATCCACGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSWFPSSFPRCSRPRVQQGQNT*AEHPRE Trigger: CTCACGTGGATGTTCAGCTCAAGTATTTTGACCTTG...CTGGACACGGGGTCTGGAGCATCGTGGGAAGCTGGATGGGAACCAGGACCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | CGATGCTCCAGACCCCGTGTCCAGGCAAAGATGCTGGCAATAGGGTTGGTACTGACATTTTCTTCAGCTTaGACTCTTCCACACGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCSRPRVQAKMLAIGLVLTFSSA*TLPHGP Trigger: AGGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGT...CAGTACCAACCCTATTGCCAGCATCTTTGCCTGGACACGGGGTCTGGAGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGTCTTATAGTGCTTGTCAAAGATCTCCTGGAAGATGTCCTTGAAACGCCCCGTGCCTGCCAATGGTaGTGGGCTTGGTCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLIVLVKDLLEDVLETPRACQW*WAWSSQ Trigger: CTGGCTGGACCAAGCCCATCACCATTGGCAGGCACG...GGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGCACTATAAGACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCAAAGCCTAGCTTTCATGGTCTGGTCACGGTTTaGAAGCCCAAGGTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GQTSTDVIRPREPKPSFHGLVTV*KPKVKI Trigger: TATTTTGACCTTGGGCTTCCAAACCGTGACCAGACC...ATGAAAGCTAGGCTTTGGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125542.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCGGTAATGGCGGGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTGAGTCAATGGTGACCTaGTCATTGGTCTGGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVMAGDCPMSSLSLNCLESMVT*SLVWSR Trigger: CCGTGACCAGACCAATGACCAGGTCACCATTGACTC...AAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTACCGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCCAGCGTCTGTGCAAACCTGATAAGGTCCTGGTTCCCATCCAGCTTCCACTGTACTTCTGGGTaGCCAGAGCAGAGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFSSVCANLIRSWFPSSFHCTSG*PEQSQW Trigger: CCATTGACTCTGCTCTGGCCACCCAGAAGTACAGTG...GAAGCTGGATGGGAACCAGGACCTTATCAGGTTTGCACAGACGCTGGAGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTTTTTGCAGATGATTaGCTCTCTGAAGACGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSVFADD*LSEDGS Trigger: GGAACCGTCTTCAGAGAGCCAATCATCTGCAAAAAC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | CAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCTACCACAAAATCTGTaGCCTTGTACTGGTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSSHQGRPAQMSSGRGSLPQNL*PCTGRH Trigger: ATGGCGACCAGTACAAGGCCACAGATTTTGTGGTAG...GCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCACTGCTGCCATCCTTTaGGGTGAAGACCAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NCLPIRADQHRCHQAEGATAAIL*GEDQLE Trigger: TTCAAGTTGGTCTTCACCCCAAAGGATGGCAGCAGT...GGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCAAAGCCTAGCTTTCATGTTTTTGCAGATGATTaGCTCTCTGAAGACGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQTSTDVIRPREPKPSFHVFADD*LSEDGS Trigger: GGAACCGTCTTCAGAGAGCCAATCATCTGCAAAAAC...ATGAAAGCTAGGCTTTGGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125542.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTTGTCAAAGATCTCCTaGAAGATGTCCTTGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: GCEAHPLPCTEYPLELSSLSKIS*KMSLKR Trigger: GCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGAATGGTGTTCTTGGTaGTCAAGTAGAGCGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QPQPQLSSHQGRPAQMSSEWCSW*SSRAAI Trigger: AATGGCCGCTCTACTTGAGCACCAAGAACACCATTC...TGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR TCA 90 bp | ATCATAGTTTTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCACATTTTCTTCAGCTTaGACTCTTCCACACGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIVFASPHKATGRLEHLGTFSSA*TLPHGP Trigger: AGGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGT...GCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAAAACTATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR GCA 90 bp | ATCATAGTTTTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCTTCTCCTTGATGAACTaGCAGATGATCCGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IIVFASPHKATGRLEHLGFSLMN*QMIRVI Trigger: GATGACCCGGATCATCTGGCAGTTCATCAAGGAGAA...GCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAAAACTATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGTTGCTCTTAATGGTGTCCAGGAAGTCTGTGGTGTTCAGGAAGTGCTCGGTCTGGTCACGGTTTaGAAGCCCAAGGTCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VQVALNGVQEVCGVQEVLGLVTV*KPKVKI Trigger: TATTTTGACCTTGGGCTTCCAAACCGTGACCAGACC...GAGCACTTCCTGAACACCACAGACTTCCTGGACACCATTAAGAGCAACCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCTCTTAATGGTGTCCAGGAAGTCTGTGGTGTTCAGGAAGTGCTCGTTCGTTTTTGCAGATGATTaGCTCTCTGAAGACGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLLMVSRKSVVFRKCSFVFADD*LSEDGS Trigger: GGAACCGTCTTCAGAGAGCCAATCATCTGCAAAAAC...GAACGAGCACTTCCTGAACACCACAGACTTCCTGGACACCATTAAGAGCAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CCA 90 bp | CCGATGTTCATACCAGATCTTATTCTTGTCGAAGTCAGTCTTATAGTGCTTGTCTTGTACTGGTCGCCATaGGCGTGCCTGCCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PMFIPDLILVEVSLIVLVLYWSP*ACLPMV Trigger: CACCATTGGCAGGCACGCCCATGGCGACCAGTACAA...GACAAGCACTATAAGACTGACTTCGACAAGAATAAGATCTGGTATGAACATCGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS TCA 90 bp | CGGCCAGCTGGGGACAGTCAGTGCTGCCGGTGCCCAGGTCCGCGCTaGGCCCGAGGCTCTGCAGAGCGAGCTCACAGCCCGCAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAGDSQCCRCPGPR*ARGSAERAHSPQVA Trigger: GGCTACCTGCGGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAGCGCGGACCTGGGCACCGGCAGCACTGACTGTCCCCAGCTGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS TCA 90 bp | GGGTCATCTCGTCACCGTCCATCTCCACTACCGGCTTCTCCACCTTaGTCCTCTTCTCAGCATAGTGGCGCCGCGGCTGCTCCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSRHRPSPLPASPP*SSSQHSGAAAAPAS Trigger: GCTGGCCGGAGCAGCCGCGGCGCCACTATGCTGAGAAGAGGATCAAGGTGGAGAAGCCGGTAGTGGAGATGGACGGTGACGAGATGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCAGCCAGCCAGGTCCTaGGTCATCGCTCCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSQPARS*VIAPLS Trigger: GGAGAGCGGAGCGATGACCAAGGACCTGGCTGGCTG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACATGCTGGCAATAGGGTaGGTACTGGTGGGCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHMLAIG*VLVGRP Trigger: GGGCCGGCCCACCAGTACCAACCCTATTGCCAGCAT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACCCAATGGTGATGGGCTaGGTCCAGCCAGGGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHPMVMG*VQPGTR Trigger: CCTTGTCCCTGGCTGGACCAAGCCCATCACCATTGG...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | AATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTCATCAGGCCGAGGGAGCCCCAATGGTGATGGGCTaGGTCCAGCCAGGGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NCLPIRADQHRCHQAEGAPMVMG*VQPGTR Trigger: CCTTGTCCCTGGCTGGACCAAGCCCATCACCATTGG...GGCTCCCTCGGCCTGATGACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACGAGGGAGCCAAAGCCTaGAGCCAGGATGTCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHEGAKA*SQDVRL Trigger: CAGTCTGACATCCTGGCTCAAGGCTTTGGCTCCCTC...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CAA 90 bp | TTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCGAGTGCCTCGTCGGTGTaGTACATCCCCATCCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: LQAHTKPPEDLSTWATMSSASSV*YIPIPT Trigger: CGTTGGGATGGGGATGTACAACACCGACGAGGCACT...CGACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125542.3 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGACTCCTCGTCGGTGTaGTACATCCCCATCCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSDSSSV*YIPIPT Trigger: CGTTGGGATGGGGATGTACAACACCGACGAGGAGTC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACTACACCTCCCACTCCTaGGCACTGCTGCCATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHYTSHS*ALLPSF Trigger: AAAGGATGGCAGCAGTGCCAAGGAGTGGGAGGTGTA...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACATGGACTCGTCGGTGTaGTACATCCCCATCCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHMDSSV*YIPIPT Trigger: CGTTGGGATGGGGATGTACAACACCGACGAGTCCAT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTATGGTGACCTGGTCATaGGTCTGGTCACGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSMVTWS*VWSRFG Trigger: TCCAAACCGTGACCAGACCAATGACCAGGTCACCAT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGGAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGCACATTTTCTTCAGCTaGAACTCTTCCACACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLELSSVHPYCLPRALSRHIFFS*NSSTRA Trigger: GGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGTG...CCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACCATGTCTACACCTCCCACTCCTaGGCACTGCTGCCATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FASPHKATGRLEHLGHHVYTSHS*ALLPSF Trigger: AAAGGATGGCAGCAGTGCCAAGGAGTGGGAGGTGTA...GACATGGTGGCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | CGATGCTCCAGACCCCGTGTCCAGGCAAAGATGCTGGCAATAGGGTTGGTACTGTACACCTCCCACTCCTaGGCACTGCTGCCATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCSRPRVQAKMLAIGLVLYTSHS*ALLPSF Trigger: AAAGGATGGCAGCAGTGCCAAGGAGTGGGAGGTGTA...CAGTACCAACCCTATTGCCAGCATCTTTGCCTGGACACGGGGTCTGGAGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTAGAGCTCTGTCCAGGTaGCTCTTAATGGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSRALSR*LLMVSR Trigger: CCTGGACACCATTAAGAGCAACCTGGACAGAGCTCT...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTTGGTCTGGTCACGGTTaGGAAGCCCAAGGTCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSWSGHG*EAQGQN Trigger: ATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCA...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTGATTGTGGCACACTaGACAGCCACACTGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSVIVAH*TATLYF Trigger: GAAGTACAGTGTGGCTGTCAAGTGTGCCACAATCAC...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTCACATTTTCTTCAGCTaGAACTCTTCCACACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCEAHPLPCTEYPLELSSHIFFS*NSSTRA Trigger: GGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGTG...ACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCCTCTGCCATGTACAGAGTACCCACTGGAGCTGAGTAGTGTCCACAGGATGAGCTTCTCCTaGATGAACTGCCAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: EAHPLPCTEYPLELSSVHRMSFS*MNCQMI Trigger: GATCATCTGGCAGTTCATCAAGGAGAAGCTCATCCT...GTGGACACTACTCAGCTCCAGTGGGTACTCTGTACATGGCAGAGGGTGGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTGAGTAGTGTCCACCCCTACTGCTTGCCCAGAGCTCTGTCCAGGTTGCTCAGGATGAGCTTCTCCTaGATGAACTGCCAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: ELSSVHPYCLPRALSRLLRMSFS*MNCQMI Trigger: GATCATCTGGCAGTTCATCAAGGAGAAGCTCATCCT...GAGCAACCTGGACAGAGCTCTGGGCAAGCAGTAGGGGTGGACACTACTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTCTTAATGGTGTCCAGGAAGTCTGTGGTGTTCAGGAAGTGCTCGTTCCCAATGGTGATGGGCTaGGTCCAGCCAGGGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLLMVSRKSVVFRKCSFPMVMG*VQPGTR Trigger: CCTTGTCCCTGGCTGGACCAAGCCCATCACCATTGG...GAACGAGCACTTCCTGAACACCACAGACTTCCTGGACACCATTAAGAGCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS CCA 90 bp | GCCACACTGTACTTCTGGGTGGCCAGAGCAGAGTCAATGGTGACCTaGTCATTGGTCTGGTCACGGTTTGGAAGCCCAAGGTCAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: ATLYFWVARAESMVT*SLVWSRFGSPRSKY Trigger: GTATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTGGCCACCCAGAAGTACAGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | GTAATGGCGGGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCTGGTCTGGTCACGGTTaGGAAGCCCAAGGTCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VMAGDCPMSSLSLNCLPIWSGHG*EAQGQN Trigger: ATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCA...GATGGGAAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTATGGTGACCTGGTCATaGGTCTGGTCACGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSSLSLNCLPIRADQHRCMVTWS*VWSRFG Trigger: TCCAAACCGTGACCAGACCAATGACCAGGTCACCAT...ACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCGGTAATGGCGGGTGACTGTCCCATGAGCAGCCTCAGCCTCAATTGTCTTATGGTGACCTGGTCATaGGTCTGGTCACGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSVMAGDCPMSSLSLNCLMVTWS*VWSRFG Trigger: TCCAAACCGTGACCAGACCAATGACCAGGTCACCAT...AAGACAATTGAGGCTGAGGCTGCTCATGGGACAGTCACCCGCCATTACCGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTGTGATTGTGGCACACTaGACAGCCACACTGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSLSLNCLPIRADQHRCVIVAH*TATLYF Trigger: GAAGTACAGTGTGGCTGTCAAGTGTGCCACAATCAC...ACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS CCA 90 bp | CAGAGCAGAGTCAATGGTGACCTGGTCATTGGTCTGGTCACGGTTTaGAAGCCCAAGGTCAAAATACTTGAGCTGAACATCCACGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSRVNGDLVIGLVTV*KPKVKILELNIHVR Trigger: CCTCACGTGGATGTTCAGCTCAAGTATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGCCTCAGCCTCAATTGTCTTCCCATCAGGGCAGACCAGCACAGATGTAGGATGAGCTTCTCCTaGATGAACTGCCAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: MSSLSLNCLPIRADQHRCRMSFS*MNCQMI Trigger: GATCATCTGGCAGTTCATCAAGGAGAAGCTCATCCT...ACATCTGTGCTGGTCTGCCCTGATGGGAAGACAATTGAGGCTGAGGCTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS-3UTR CAA 90 bp | ATCATAGTTTTTGCAAGCCCACACAAAGCCACCGGAAGACTTGAGCACCTGGGCCACATTTTCTTCAGCTaGAACTCTTCCACACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIVFASPHKATGRLEHLGHIFFS*NSSTRA Trigger: GGCCCGTGTGGAAGAGTTCAAGCTGAAGAAAATGTG...GCCCAGGTGCTCAAGTCTTCCGGTGGCTTTGTGTGGGCTTGCAAAAACTATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS TCA 90 bp | AGTCAGTCTTATAGTGCTTGTCAAAGATCTCCTGGAAGATGTCCTTaGAACGCCCGTCATAGGCCTTCAGAATGGTGTTCTTGGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSYSACQRSPGRCP*NARHRPSEWCSWCS Trigger: TGAGCACCAAGAACACCATTCTGAAGGCCTATGACGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGCACTATAAGACTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS GCA 72 bp | CTGCCGGTGCCCAGGTCCGCGCTGAGCCCGAGGCTCTaGAGAGCGAGCTCACAGCCCGCAGGTAGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPVPRSALSPRL*RASSQPAGSRP Trigger: TGGCCGGCTACCTGCGGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAGCGCGGACCTGGGCACCGGCAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS TCA 72 bp | GGGGACAGTCAGTGCTGCCGGTGCCCAGGTCCGCGCTaGGCCCGAGGCTCTGCAGAGCGAGCTCACAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GDSQCCRCPGPR*ARGSAERAHSP Trigger: CGGGCTGTGAGCTCGCTCTGCAGAGCCTCGGGCTCAGCGCGGACCTGGGCACCGGCAGCACTGACTGTCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 ENSMUST00000206714.2 |
||
| CDS TCA 72 bp | ACTGTGGGGAGAGCGGGCATAGCATGGCCCCCAGGCTaGAAACTGCCACTCTGCCATGGTCCCAGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVGRAGIAWPPG*KLPLCHGPRAR Trigger: CCTGGCCCTGGGACCATGGCAGAGTGGCAGTTTTCAGCCTGGGGGCCATGCTATGCCCGCTCTCCCCACAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS CAA 72 bp | TGGTCGCCATGGGCGTGCCTGCCAATGGTGATGGGCTaGGTCCAGCCAGGGACAAGGCGGGGGATGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSPWACLPMVMG*VQPGTRRGMFL Trigger: CAAAAACATCCCCCGCCTTGTCCCTGGCTGGACCAAGCCCATCACCATTGGCAGGCACGCCCATGGCGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS CAA 72 bp | CAGCTGTGCGCGAAGCCCGAAATGGACTCGTCGGTGTaGTACATCCCCATCCCAACGCCTCCGGCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QLCAKPEMDSSV*YIPIPTPPAGK Trigger: CTTCCCTGCCGGAGGCGTTGGGATGGGGATGTACAACACCGACGAGTCCATTTCGGGCTTCGCGCACAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
||
| CDS GCA 72 bp | ACAAAATCTGTGGCCTTGTACTGGTCGCCATGGGCGTaGCTGCCAATGGTGATGGGCTTGGTCCAGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TKSVALYWSPWA*LPMVMGLVQPG Trigger: CCCTGGCTGGACCAAGCCCATCACCATTGGCAGGCACGCCCATGGCGACCAGTACAAGGCCACAGATTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS CAA 72 bp | AGCACCTCCATAAGACTCCTGGACTCCTCGTCGGTGTaGTACATCCCCATCCCAACGCCTCCGGCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STSIRLLDSSSV*YIPIPTPPAGK Trigger: CTTCCCTGCCGGAGGCGTTGGGATGGGGATGTACAACACCGACGAGGAGTCCAGGAGTCTTATGGAGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS CAA 90 bp | AGGGCCAGCAGCACCTCCATAAGACTCCTGGACTCCTCGTCGGTGTaGTACATCCCCATCCCAACGCCTCCGGCAGGGAAGTTATACACC | + |
|
Preference number: 6 (lower is better) Translates to: RASSTSIRLLDSSSV*YIPIPTPPAGKLYT Trigger: GGTGTATAACTTCCCTGCCGGAGGCGTTGGGATGGGGATGTACAACACCGACGAGGAGTCCAGGAGTCTTATGGAGGTGCTGCTGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS CAA 90 bp | CCCATCCCAACGCCTCCGGCAGGGAAGTTATACACCTCCCACTCCTaGGCACTGCTGCCATCCTTTGGGGTGAAGACCAACTTGAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: PIPTPPAGKLYTSHS*ALLPSFGVKTNLNV Trigger: CACGTTCAAGTTGGTCTTCACCCCAAAGGATGGCAGCAGTGCCAAGGAGTGGGAGGTGTATAACTTCCCTGCCGGAGGCGTTGGGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS GCA 72 bp | GGCCATTTCTTCTGGATAGAGTACTGGAAGCAGCTGTaGGCGAAGCCCGAAATGGACTGTGGGGAGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHFFWIEYWKQL*AKPEMDCGESG Trigger: CCCGCTCTCCCCACAGTCCATTTCGGGCTTCGCGCACAGCTGCTTCCAGTACTCTATCCAGAAGAAATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134328.8 |
||
| CDS CAA 72 bp | TCCACACGGGCCTCATCAGGGGTGATTGTGGCACACTaGACAGCCACACTGTACTTCTGGGTGGCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: STRASSGVIVAH*TATLYFWVARA Trigger: TGCTCTGGCCACCCAGAAGTACAGTGTGGCTGTCAAGTGTGCCACAATCACCCCTGATGAGGCCCGTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
||
| CDS CAA 72 bp | ACGCCTCCGGCAGGGAAGTTATACACCTCCCACTCCTaGGCACTGCTGCCATCCTTTGGGGTGAAGACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TPPAGKLYTSHS*ALLPSFGVKTN Trigger: GTTGGTCTTCACCCCAAAGGATGGCAGCAGTGCCAAGGAGTGGGAGGTGTATAACTTCCCTGCCGGAGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 72 bp | AACGTGCCAGCTCGATCTACCACAAAATCTGTGGCCTaGTACTGGTCGCCATGGGCGTGCCTGCCAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: NVPARSTTKSVA*YWSPWACLPMV Trigger: CACCATTGGCAGGCACGCCCATGGCGACCAGTACAAGGCCACAGATTTTGTGGTAGATCGAGCTGGCACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 90 bp | ACCAACTTGAACGTGCCAGCTCGATCTACCACAAAATCTGTGGCCTaGTACTGGTCGCCATGGGCGTGCCTGCCAATGGTGATGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TNLNVPARSTTKSVA*YWSPWACLPMVMGL Trigger: CAAGCCCATCACCATTGGCAGGCACGCCCATGGCGACCAGTACAAGGCCACAGATTTTGTGGTAGATCGAGCTGGCACGTTCAAGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CCA 72 bp | TACTTCTGGGTGGCCAGAGCAGAGTCAATGGTGACCTaGTCATTGGTCTGGTCACGGTTTGGAAGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: YFWVARAESMVT*SLVWSRFGSPR Trigger: CCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTGGCCACCCAGAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 90 bp | TTGAACTCTTCCACACGGGCCTCATCAGGGGTGATTGTGGCACACTaGACAGCCACACTGTACTTCTGGGTGGCCAGAGCAGAGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LNSSTRASSGVIVAH*TATLYFWVARAESM Trigger: CATTGACTCTGCTCTGGCCACCCAGAAGTACAGTGTGGCTGTCAAGTGTGCCACAATCACCCCTGATGAGGCCCGTGTGGAAGAGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS GCA 72 bp | GGCCATTTCTTCTGGATAGAGTACTGGAAGCAGCTGTaGGCGAAGCCCGAAATGGACTCGTCGGTGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: GHFFWIEYWKQL*AKPEMDSSVLY Trigger: GTACAACACCGACGAGTCCATTTCGGGCTTCGCGCACAGCTGCTTCCAGTACTCTATCCAGAAGAAATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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| CDS CAA 72 bp | TGGGTGGCCAGAGCAGAGTCAATGGTGACCTGGTCATaGGTCTGGTCACGGTTTGGAAGCCCAAGGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: WVARAESMVTWS*VWSRFGSPRSK Trigger: TTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTGGCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 90 bp | TCCCACTCCTTGGCACTGCTGCCATCCTTTGGGGTGAAGACCAACTaGAACGTGCCAGCTCGATCTACCACAAAATCTGTGGCCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SHSLALLPSFGVKTN*NVPARSTTKSVALY Trigger: GTACAAGGCCACAGATTTTGTGGTAGATCGAGCTGGCACGTTCAAGTTGGTCTTCACCCCAAAGGATGGCAGCAGTGCCAAGGAGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 90 bp | CTGTACTTCTGGGTGGCCAGAGCAGAGTCAATGGTGACCTGGTCATaGGTCTGGTCACGGTTTGGAAGCCCAAGGTCAAAATACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LYFWVARAESMVTWS*VWSRFGSPRSKYLS Trigger: GCTCAAGTATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTGGCCACCCAGAAGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS CCA 72 bp | GCCAGAGCAGAGTCAATGGTGACCTGGTCATTGGTCTaGTCACGGTTTGGAAGCCCAAGGTCAAAATACTTG | + |
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Preference number: 6 (lower is better) Translates to: ARAESMVTWSLV*SRFGSPRSKYL Trigger: CAAGTATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGACTCTGCTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CAA 72 bp | TTGGCACTGCTGCCATCCTTTGGGGTGAAGACCAACTaGAACGTGCCAGCTCGATCTACCACAAAATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LALLPSFGVKTN*NVPARSTTKSV Trigger: CACAGATTTTGTGGTAGATCGAGCTGGCACGTTCAAGTTGGTCTTCACCCCAAAGGATGGCAGCAGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107384.10 ENSMUST00000125542.3 ENSMUST00000134328.8 |
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| CDS CCA 72 bp | GTCAATGGTGACCTGGTCATTGGTCTGGTCACGGTTTaGAAGCCCAAGGTCAAAATACTTGAGCTGAACATC | + |
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Preference number: 6 (lower is better) Translates to: VNGDLVIGLVTV*KPKVKILELNI Trigger: GATGTTCAGCTCAAGTATTTTGACCTTGGGCTTCCAAACCGTGACCAGACCAATGACCAGGTCACCATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107384.10 ENSMUST00000134328.8 |
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| CDS TCA 72 bp | TATAGTGCTTGTCAAAGATCTCCTGGAAGATGTCCTTaGAACGCCCGTCATAGGCCTTCAGAATGGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: YSACQRSPGRCP*NARHRPSEWCS Trigger: AGAACACCATTCTGAAGGCCTATGACGGGCGTTTCAAGGACATCTTCCAGGAGATCTTTGACAAGCACTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107384.10 |
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