Pregenerated sensors for IDH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025950Ensembl transcript IDs: ENSMUST00000097709.11, ENSMUST00000169032.8
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCAGCAGGTCAGCAGAAATCCAAACGGTACAGCTCCCATTATTaGCCATGGGTGAAATGTACTGCTTGGGGTAGGATAATACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: NAAGQQKSKRYSSHY*PWVKCTAWGRIILR Trigger: CCTAAGTATTATCCTACCCCAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTCTGCTGACCTGCTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR CCA 90 bp | AAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTaGGGTAGGATAATACTTAGGCTGGGTCACAGGAGAAGAGAAATC | + |
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Preference number: 1 (lower is better) Translates to: KRYSSHYCPWVKCTA*GRIILRLGHRRREI Trigger: GATTTCTCTTCTCCTGTGACCCAGCCTAAGTATTATCCTACCCCAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTGCTATTGTTCACCCTTaGAGCACTTCTGATTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFAIVHP*STSDFG Trigger: ACCAAAATCAGAAGTGCTCCAAGGGTGAACAATAGC...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGCCCTTGGAGCACTTCTaGTTTTGGTCATTTACATTA | + |
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Preference number: 2 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLPLEHF*FWSFTL Trigger: TAATGTAAATGACCAAAATCAGAAGTGCTCCAAGGG...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACAGCTATTGTTCACCCTTaGAGCACTTCTGATTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTAIVHP*STSDFG Trigger: ACCAAAATCAGAAGTGCTCCAAGGGTGAACAATAGC...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACAGAGCATGAGAAAACATaGCAGTTAATTGTGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTEHEKT*QLIVNR Trigger: CCTGTTCACAATTAACTGTCATGTTTTCTCATGCTC...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACACCCTTGGAGCACTTCTaGTTTTGGTCATTTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTPLEHF*FWSFTL Trigger: TAATGTAAATGACCAAAATCAGAAGTGCTCCAAGGG...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTGGGAGCATGAGAAAACATaGCAGTTAATTGTGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: KEQNPPVCIYSRLGILQWEHEKT*QLIVNR Trigger: CCTGTTCACAATTAACTGTCATGTTTTCTCATGCTC...CCACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR GCA 72 bp | GGTCAGCAGAAATCCAAACGGTACAGCTCCCATTATTaGCCATGGGTGAAATGTACTGCTTGGGGTAGGATA | + |
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Preference number: 3 (lower is better) Translates to: GQQKSKRYSSHY*PWVKCTAWGRI Trigger: TATCCTACCCCAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTCTGCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR CCA 72 bp | AGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTaGGGTAGGATAATACTTAGGCTGGGTCACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSHYCPWVKCTA*GRIILRLGHRR Trigger: TCTCCTGTGACCCAGCCTAAGTATTATCCTACCCCAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTGGAGCACTTCTGATTTaGGTCATTTACATTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFGALLI*VIYIRA Trigger: TGCTCTAATGTAAATGACCAAAATCAGAAGTGCTCC...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTGGAGCACTTCTGATTTaGGTCATTTACATTAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QKSKRYSSHYCPWVKCTAGALLI*VIYIRA Trigger: TGCTCTAATGTAAATGACCAAAATCAGAAGTGCTCC...AGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGGCATTTATTCTAGACTaGGAATTCTCCAGTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLAFILD*EFSSGL Trigger: AAGACCACTGGAGAATTCCAAGTCTAGAATAAATGC...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR TCA 72 bp | TTTAGCTACACACATCCTATCTGTTCCAGTCTTATGTaGGCTTACTGTATAGCTCTCCCACACACAGTACAA | + |
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Preference number: 3 (lower is better) Translates to: FSYTHPICSSLM*AYCIALPHTVQ Trigger: TTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAGATAGGATGTGTGTAGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTTGCGGTAGTGACGTGTaGCAGTGCCATGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFCGSDV*QCHGQP Trigger: AGGCTGCCCATGGCACTGTCACACGTCACTACCGCA...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACATGCGGTAGTGACGTGTaGCAGTGCCATGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTCGSDV*QCHGQP Trigger: AGGCTGCCCATGGCACTGTCACACGTCACTACCGCA...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACCTGTGGACCTAGTTACCGCAAAGACTCATTCTAAGCCCAGGTTTGACCTGCAGCATCTTTGGTaGCCTGGTCATTGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RKPVDLVTAKTHSKPRFDLQHLW*PGHWWH Trigger: ATGCCACCAATGACCAGGTCACCAAAGATGCTGCAG...GTCAAACCTGGGCTTAGAATGAGTCTTTGCGGTAACTAGGTCCACAGGTTTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | CGTAAACCTGTGGACCTAGTTACCGCAAAGACTCATTCTAAGCCCAGGTTTGACGGGACCAGGCAAAAATaGAAGCAATGGGGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RKPVDLVTAKTHSKPRFDGTRQK*KQWGWW Trigger: CCACCAACCCCATTGCTTCCATTTTTGCCTGGTCCC...GTCAAACCTGGGCTTAGAATGAGTCTTTGCGGTAACTAGGTCCACAGGTTTACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTGGGACCAGGCAAAAATaGAAGCAATGGGGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFGTRQK*KQWGWW Trigger: CCACCAACCCCATTGCTTCCATTTTTGCCTGGTCCC...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| 3UTR CAA 72 bp | GCTTACTGTATAGCTCTCCCACACACAGTACAACATTaGCGTACAAAGGCCCCAGTGTTCACACTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYCIALPHTVQH*RTKAPVFTLMD Trigger: GTCCATGAGTGTGAACACTGGGGCCTTTGTACGCAAATGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGGACAAATCAGCACACTaGTCATCATGCCAAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLDKSAH*SSCQGS Trigger: GCTCCCTTGGCATGATGACCAGTGTGCTGATTTGTC...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | ATAATACTTAGGCTGGGTCACAGGAGAAGAGAAATCAAAGAGCAGAATCCTCCATCAAGCTTTGCTCTGTaGGCTAACCCTCGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: IILRLGHRRREIKEQNPPSSFAL*ANPRDQ Trigger: CTGGTCCCGAGGGTTAGCCCACAGAGCAAAGCTTGA...TGGAGGATTCTGCTCTTTGATTTCTCTTCTCCTGTGACCCAGCCTAAGTATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGCCACCATGTCATCTATaGGCCTGTGTTCATAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLPPCHL*ACVHSR Trigger: TCTGCTATGAACACAGGCTCATAGATGACATGGTGG...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACCTGTGGACCTAGTTACCGCAAAGACTCATTCTAAGCCCAGGTTTGACGAATGTTTCGGATGGTaGCATTTGGGGATTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: RKPVDLVTAKTHSKPRFDECFGW*HLGIST Trigger: TGTGGAAATCCCCAAATGGCACCATCCGAAACATTC...GTCAAACCTGGGCTTAGAATGAGTCTTTGCGGTAACTAGGTCCACAGGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTCAAAAATGGAAGCAATaGGGTTGGTGGACGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFQKWKQ*GWWTSL Trigger: AAGAGACGTCCACCAACCCCATTGCTTCCATTTTTG...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTTCAAGCTTTGCTCTGTaGGCTAACCCTCGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SKSRILQSAFILDLEFSSSSFAL*ANPRDQ Trigger: CTGGTCCCGAGGGTTAGCCCACAGAGCAAAGCTTGA...ACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACACCACCATGTCATCTATaGGCCTGTGTTCATAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTPPCHL*ACVHSR Trigger: TCTGCTATGAACACAGGCTCATAGATGACATGGTGG...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACCTGTGGACCTAGTTACCGCAAAGACTCATTCTAAGCCCAGGTTTGACCCTTTGCGAAGAAGCTaGGCTCAGTATTGTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: RKPVDLVTAKTHSKPRFDPLRRS*AQYCYQ Trigger: TTGATAACAATACTGAGCTCAGCTTCTTCGCAAAGG...GTCAAACCTGGGCTTAGAATGAGTCTTTGCGGTAACTAGGTCCACAGGTTTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTCCTTTGCGAAGAAGCTaGGCTCAGTATTGTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFPLRRS*AQYCYQ Trigger: TTGATAACAATACTGAGCTCAGCTTCTTCGCAAAGG...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACATCAGTTGCTCTGTATTaGTCCCCATATGCATGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTSVALY*SPYACR Trigger: CCGACATGCATATGGGGACCAATACAGAGCAACTGA...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTTCAATTGACTTATCCTaGTTGTACATGCCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFSIDLS*LYMPMA Trigger: TGCCATGGGCATGTACAACCAGGATAAGTCAATTGA...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | ATAATACTTAGGCTGGGTCACAGGAGAAGAGAAATCAAAGAGCAGAATCCTCCAGACAAATCAGCACACTaGTCATCATGCCAAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IILRLGHRRREIKEQNPPDKSAH*SSCQGS Trigger: GCTCCCTTGGCATGATGACCAGTGTGCTGATTTGTC...TGGAGGATTCTGCTCTTTGATTTCTCTTCTCCTGTGACCCAGCCTAAGTATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | CAGAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTACCGTCTTACCATCTaGACAAATCAGCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: QKSKRYSSHYCPWVKCTAYRLTI*TNQHTG Trigger: ACCAGTGTGCTGATTTGTCCAGATGGTAAGACGGTA...AGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGATGTATGTCACCTTCTaGGTTCCATCTTTTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLMYVTF*VPSFGV Trigger: CACACCAAAAGATGGAACTCAGAAGGTGACATACAT...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACACAAAAATGGAAGCAATaGGGTTGGTGGACGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTQKWKQ*GWWTSL Trigger: AAGAGACGTCCACCAACCCCATTGCTTCCATTTTTG...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACAATGTATGTCACCTTCTaGGTTCCATCTTTTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTMYVTF*VPSFGV Trigger: CACACCAAAAGATGGAACTCAGAAGGTGACATACAT...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTGGGAATGTTTCGGATGGTaGCATTTGGGGATTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: KEQNPPVCIYSRLGILQWECFGW*HLGIST Trigger: TGTGGAAATCCCCAAATGGCACCATCCGAAACATTC...CCACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTTCAGTTGCTCTGTATTaGTCCCCATATGCATGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SKSRILQSAFILDLEFSSSVALY*SPYACR Trigger: CCGACATGCATATGGGGACCAATACAGAGCAACTGA...ACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTGGTACCGTCTTACCATCTaGACAAATCAGCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: KEQNPPVCIYSRLGILQWYRLTI*TNQHTG Trigger: ACCAGTGTGCTGATTTGTCCAGATGGTAAGACGGTA...CCACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR GCA 90 bp | CTGTTCCAGTCTTATGTGAGCTTACTGTATAGCTCTCCCACACACAGTACAACAAACAACAAAATCAGTTaGTCTGTATTGGTCCCCATA | + |
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Preference number: 4 (lower is better) Translates to: LFQSYVSLLYSSPTHSTTNNKIS*SVLVPI Trigger: TATGGGGACCAATACAGAGCAACTGATTTTGTTGTT...TGTTGTACTGTGTGTGGGAGAGCTATACAGTAAGCTCACATAAGACTGGAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTAACAACAAAATCAGTTaGTCTGTATTGGTCCCCATA | + |
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Preference number: 4 (lower is better) Translates to: SKSRILQSAFILDLEFSSNNKIS*SVLVPI Trigger: TATGGGGACCAATACAGAGCAACTGATTTTGTTGTT...ACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | CAGAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTCACTTGACGCCCACGTaGTATTTCTTTATAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QKSKRYSSHYCPWVKCTAHLTPT*YFFIAS Trigger: AGAGGCTATAAAGAAATACAACGTGGGCGTCAAGTG...AGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGCACTTGACGCCCACGTaGTATTTCTTTATAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLHLTPT*YFFIAS Trigger: AGAGGCTATAAAGAAATACAACGTGGGCGTCAAGTG...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGGCCCCAGTGTTCACACTCATGGACAACAGGGGAAGTGAGTTTCTCTTTTCTGAGTTCCATCTTTaGGTGTGTAGGTTATCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TKAPVFTLMDNRGSEFLFSEFHL*VCRLSL Trigger: TAGAGATAACCTACACACCAAAAGATGGAACTCAGA...AAAGAGAAACTCACTTCCCCTGTTGTCCATGAGTGTGAACACTGGGGCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | GAAATCCAAACGGTACAGCTCCCATTATTGCCCATGGGTGAAATGTACTGCTTGGTGCAAAGTCTTCAATaGACTTATCCTGGTTGTACA | + |
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Preference number: 5 (lower is better) Translates to: EIQTVQLPLLPMGEMYCLVQSLQ*TYPGCT Trigger: TGTACAACCAGGATAAGTCAATTGAAGACTTTGCAC...CAAGCAGTACATTTCACCCATGGGCAATAATGGGAGCTGTACCGTTTGGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTGGAAGCTGAGCTCAGTATaGTTATCAAGCTTTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KEQNPPVCIYSRLGILQWKLSSV*LSSFAL Trigger: CAGAGCAAAGCTTGATAACAATACTGAGCTCAGCTT...CCACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | ATAATACTTAGGCTGGGTCACAGGAGAAGAGAAATCAAAGAGCAGAATCCTCCAAAGCTGAGCTCAGTATaGTTATCAAGCTTTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IILRLGHRRREIKEQNPPKLSSV*LSSFAL Trigger: CAGAGCAAAGCTTGATAACAATACTGAGCTCAGCTT...TGGAGGATTCTGCTCTTTGATTTCTCTTCTCCTGTGACCCAGCCTAAGTATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | ATAATACTTAGGCTGGGTCACAGGAGAAGAGAAATCAAAGAGCAGAATCCTCCATCTGAGTTCCATCTTTaGGTGTGTAGGTTATCTCTA | + |
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Preference number: 5 (lower is better) Translates to: IILRLGHRRREIKEQNPPSEFHL*VCRLSL Trigger: TAGAGATAACCTACACACCAAAAGATGGAACTCAGA...TGGAGGATTCTGCTCTTTGATTTCTCTTCTCCTGTGACCCAGCCTAAGTATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTGGTCAGAACGTTGTACATaGGGTAAGCCTTTAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: KEQNPPVCIYSRLGILQWSERCT*GKPLMQ Trigger: TTGCATTAAAGGCTTACCCAATGTACAACGTTCTGA...CCACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGAGCAGAATCCTCCAGTCTGCATTTATTCTAGACTTGGAATTCTCCAGTTCAGAACGTTGTACATaGGGTAAGCCTTTAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: SKSRILQSAFILDLEFSSSERCT*GKPLMQ Trigger: TTGCATTAAAGGCTTACCCAATGTACAACGTTCTGA...ACTGGAGAATTCCAAGTCTAGAATAAATGCAGACTGGAGGATTCTGCTCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097709.11 ENSMUST00000169032.8 |
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