RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ID2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020644

Ensembl transcript IDs: ENSMUST00000020974.7, ENSMUST00000221761.2, ENSMUST00000222667.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCCTTTCACAAAAGTGCCAACAAGTCCCATGAAACAGGATCATaGTACAGCGCAGATCCAGATGCAACCCACACAGAACTTATAAGT +
Preference number: 1 (lower is better)
Translates to: SSFHKSANKSHETGS*YSADPDATHTELIS
Trigger: ACTTATAAGTTCTGTGTGGGTTGCATCTGGATCTGCGCTGTAGCATGATCCTGTTTCATGGGACTTGTTGGCACTTTTGTGAAAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
3UTR-3UTR GCA 90 bp CACACAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTGCCAGCGCAGATCCAGATaGAACCCACACAGAACTTAT +
Preference number: 2 (lower is better)
Translates to: HTGGTRNTHHLFSHRVLCQRRSR*NPHRTY
Trigger: ATAAGTTCTGTGTGGGTTGCATCTGGATCTGCGCTG...GCAAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
3UTR-3UTR TCA 90 bp CATTTACCAAACCAAACATTTAACAGACACACAAGCACATTACCGAAACGCGCATGCCAACAAGTCCCATaGAACAGGATCATGCTACAG +
Preference number: 2 (lower is better)
Translates to: HLPNQTFNRHTSTLPKRACQQVP*NRIMLQ
Trigger: CTGTAGCATGATCCTGTTTCATGGGACTTGTTGGCA...TGCGCGTTTCGGTAATGTGCTTGTGTGTCTGTTAAATGTTTGGTTTGGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
3UTR GCA 72 bp CACAAAAGTGCCAACAAGTCCCATGAAACAGGATCATaGTACAGCGCAGATCCAGATGCAACCCACACAGAA +
Preference number: 3 (lower is better)
Translates to: HKSANKSHETGS*YSADPDATHTE
Trigger: TTCTGTGTGGGTTGCATCTGGATCTGCGCTGTAGCATGATCCTGTTTCATGGGACTTGTTGGCACTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR CCA 90 bp CAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTGCTATCGGCGTCCTGGACGCCTaGTTCTGTCCAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QEAPATLTIYLATEYFAIGVLDA*FCPGLW
Trigger: CCAGAGACCTGGACAGAACCAGGCGTCCAGGACGCC...GATAGCAAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR CCA 90 bp CAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTGCTATCTGTCCGTGTTCAGGGTaGTCAGCGGCGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: QEAPATLTIYLATEYFAICPCSG*SAASWT
Trigger: CGTCCAGGACGCCGCTGACCACCCTGAACACGGACA...GATAGCAAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR GCA 90 bp CAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTGCTATCTTTTGCTCCGGGAGATaGCCAAGCTGTGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: QEAPATLTIYLATEYFAIFCSGR*PSCGPT
Trigger: TGTCGGACCACAGCTTGGGCATCTCCCGGAGCAAAA...GATAGCAAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR GCA 90 bp TTTCACAAAAGTGCCAACAAGTCCCATGAAACAGGATCATGCTACAGCGCAGATCTGACGATAGTGGGATaGGAGTCCAGGGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: FHKSANKSHETGSCYSADLTIVG*ESRAIC
Trigger: GCAGATCGCCCTGGACTCGCATCCCACTATCGTCAG...ATCTGCGCTGTAGCATGATCCTGTTTCATGGGACTTGTTGGCACTTTTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR GCA 90 bp CAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTGCTATCCAAGCTAGTCTCACCTaGAAGGACAGGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: QEAPATLTIYLATEYFAIQASLT*KDRMLM
Trigger: CATCAGCATCCTGTCCTTGCAGGTGAGACTAGCTTG...GATAGCAAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS-3UTR CCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTGGCGTCCTGGACGCCTaGTTCTGTCCAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLGVLDA*FCPGLW
Trigger: CCAGAGACCTGGACAGAACCAGGCGTCCAGGACGCC...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR CCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTTGTCCGTGTTCAGGGTaGTCAGCGGCGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLCPCSG*SAASWT
Trigger: CGTCCAGGACGCCGCTGACCACCCTGAACACGGACA...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR GCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTCTGACGATAGTGGGATaGGAGTCCAGGGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLLTIVG*ESRAIC
Trigger: GCAGATCGCCCTGGACTCGCATCCCACTATCGTCAG...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR GCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTTTTTGCTCCGGGAGATaGCCAAGCTGTGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLFCSGR*PSCGPT
Trigger: TGTCGGACCACAGCTTGGGCATCTCCCGGAGCAAAA...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR GCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTGGGAATTCAGATGCCTaGAAGGACAGGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLGNSDA*KDRMLM
Trigger: CATCAGCATCCTGTCCTTGCAGGCATCTGAATTCCC...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR GCA 90 bp ATTCAACGTGTTCTCCTGGTGAAATGGCTGATAACAAAAGTCTTAAAAGATCTTAGAAGGGAATTCAGATaGCTGCAAGGACAGGATGCT +
Preference number: 4 (lower is better)
Translates to: IQRVLLVKWLITKVLKDLRREFR*LQGQDA
Trigger: AGCATCCTGTCCTTGCAGGCATCTGAATTCCCTTCT...AAGATCTTTTAAGACTTTTGTTATCAGCCATTTCACCAGGAGAACACGTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020974.7
ENSMUST00000221761.2
CDS-3UTR CAA 90 bp CGCACACAGGAGGCACCCGCAACACTCACCATTTATTTAGCCACAGAGTACTTTTGGGCAGTGGCGTACTaGCAAGCTAGTCTCACCTGC +
Preference number: 5 (lower is better)
Translates to: RTQEAPATLTIYLATEYFWAVAY*QASLTC
Trigger: GCAGGTGAGACTAGCTTGCAAGTACGCCACTGCCCA...AAAGTACTCTGTGGCTAAATAAATGGTGAGTGTTGCGGGTGCCTCCTGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS CAA 72 bp GCTCGGGAGACCCGGAGCGTCTGGGCAGTGGCGTACTaGCAAGCTAGTCTCACCTGCAAGGACAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: ARETRSVWAVAY*QASLTCKDRML
Trigger: CAGCATCCTGTCCTTGCAGGTGAGACTAGCTTGCAAGTACGCCACTGCCCAGACGCTCCGGGTCTCCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2
CDS CCA 72 bp GCTTTAAGAGTGACAGCTCGGGAGACCCGGAGCGTCTaGGCAGTGGCGTACTTGCAAGCTAGTCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: ALRVTARETRSV*AVAYLQASLTC
Trigger: GCAGGTGAGACTAGCTTGCAAGTACGCCACTGCCCAGACGCTCCGGGTCTCCCGAGCTGTCACTCTTAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222667.2