Pregenerated sensors for ID1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042745Ensembl transcript IDs: ENSMUST00000038368.9, ENSMUST00000109824.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGTCCATCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATaGGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: WSPSGPSVRRLSDTR*DRRLEHMPPVNTRA Trigger: CGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGATGGACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTGGAACACATTTCCTCTTGCCTCCTaGAGGGCTGGAGTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: VPQCAASATQDAIVGWNTFPLAS*RAGVHL Trigger: CAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAA...TGTGTTCCAGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTGGAACACAAGGGATGAGACCCACTaGAAAGGACAAGGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VPQCAASATQDAIVGWNTRDETH*KGQGGE Trigger: CTCCCCTCCTTGTCCTTTCCAGTGGGTCTCATCCCT...TGTGTTCCAGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| 3UTR CAA 90 bp | CCCCAAAGTCTCTGGAGGCTGAAAGGTGGAGAGGGTGAGGCTCTGTaGATCAAACCCTCTACCCACTGGACCGATCCGCCAAGAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: PQSLWRLKGGEGEAL*IKPSTHWTDPPRVR Trigger: CCGGACTCTTGGCGGATCGGTCCAGTGGGTAGAGGGTTTGATCAACAGAGCCTCACCCTCTCCACCTTTCAGCCTCCAGAGACTTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| 3UTR GCA 72 bp | TCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATaGGATCGTCGGCTGGAACACATGCCGCCTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SGPSVRRLSDTR*DRRLEHMPPVN Trigger: GTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| 3UTR CCA 72 bp | TTTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTaGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATG | + |
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Preference number: 3 (lower is better) Translates to: FFLLPPEGLESI*SLSAPPQRHKM Trigger: CATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| 3UTR TCA 72 bp | TCCCCAAAGTCTCTGGAGGCTGAAAGGTGGAGAGGGTaGGGCTCTGTTGATCAAACCCTCTACCCACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: SPKSLEAERWRG*GSVDQTLYPLD Trigger: GTCCAGTGGGTAGAGGGTTTGATCAACAGAGCCTCACCCTCTCCACCTTTCAGCCTCCAGAGACTTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| 3UTR CCA 72 bp | TGTGAACACCAGAGCGAGATAAGGGATGAGACCCACTaGAAAGGACAAGGAGGGGAGAGGCGTTCCCATTTC | + |
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Preference number: 3 (lower is better) Translates to: CEHQSEIRDETH*KGQGGERRSHF Trigger: GAAATGGGAACGCCTCTCCCCTCCTTGTCCTTTCCAGTGGGTCTCATCCCTTATCTCGCTCTGGTGTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR TCA 90 bp | TCCATCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTCGCCGTTCAGGGTGCTaGGCGGGGCGCGGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SIWSLSAPPQRHKMRSSARRSGC*AGRGQA Trigger: TGCCTGTCCGCGCCCCGCTCAGCACCCTGAACGGCG...AGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGATGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCGCCGTTCAGGGTGCTaGGCGGGGCGCGGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRRRSGC*AGRGQA Trigger: TGCCTGTCCGCGCCCCGCTCAGCACCCTGAACGGCG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCAGGGCCTGCAGCGGCTaGGGCACTGCCACTGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRRACSG*GTATGD Trigger: GTCGCCAGTGGCAGTGCCGCAGCCGCTGCAGGCCCT...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | ATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGATAAGGAGGGCCTGCAGCGGCTaGGGCACTGCCACTGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: MRSSAGTHAACEHQSEIRRACSG*GTATGD Trigger: GTCGCCAGTGGCAGTGCCGCAGCCGCTGCAGGCCCT...CCTTATCTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | TCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTGGAACAGCGCAGCGCGAGATaGCCACGCTTTGCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: SGPSVRRLSDTRCDRRLEQRSAR*PRFAPT Trigger: TGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTG...TTCCAGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | TCCATCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTGACACCCGCCTCCCGTaGCCTCGGTTTCCCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: SIWSLSAPPQRHKMRSSADTRLP*PRFPTE Trigger: TTCAGTGGGAAACCGAGGCCACGGGAGGCGGGTGTC...AGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGATGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCAGCGCAGCGCGAGATaGCCACGCTTTGCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRQRSAR*PRFAPT Trigger: TGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCTCACTTTGCGGTTCTaGGGCAGGGTGGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRLTLRF*GRVGTS Trigger: GCTGGTGCCCACCCTGCCCCAGAACCGCAAAGTGAG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCGATGCGATCGTCGGCTaGAACACATGCCGCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRDAIVG*NTCRLG Trigger: GCCGAGGCGGCATGTGTTCCAGCCGACGATCGCATC...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038368.9 |
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| CDS-3UTR GCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCAGCAGGACGTTCACCTaGTGCTCGTCCAGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRSRTFT*CSSSKA Trigger: CGCCTTGCTGGACGAGCAGCAGGTGAACGTCCTGCT...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCCACCTTGCTCACTTTaGGGTTCTGGGGCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRPPCSL*GSGAGW Trigger: CCACCCTGCCCCAGAACCGCAAAGTGAGCAAGGTGG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CCA 90 bp | CACAAGATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGCTCACTTTGCGGTTCTaGGGCAGGGTGGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: HKMRSSAGTHAACEHQSELTLRF*GRVGTS Trigger: GCTGGTGCCCACCCTGCCCCAGAACCGCAAAGTGAG...CTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCATCTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR TCA 90 bp | TCCATCTGGTCCCTCAGTGCGCCGCCTCAGCGACACAAGATGCGATCGTCGGCTCCAGCTGCAGGTCCCTaGTGTAGTCGATTACATGCT | + |
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Preference number: 4 (lower is better) Translates to: SIWSLSAPPQRHKMRSSAPAAGP*CSRLHA Trigger: AGCATGTAATCGACTACATCAGGGACCTGCAGCTGG...AGCCGACGATCGCATCTTGTGTCGCTGAGGCGGCGCACTGAGGGACCAGATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCGCAGGATCTCCACCTTaGTCACTTTGCGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRAGSPP*SLCGSG Trigger: CCCAGAACCGCAAAGTGAGCAAGGTGGAGATCCTGC...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCCAGCTGCAGGTCCCTaGTGTAGTCGATTACATGCT | + |
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Preference number: 4 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRPAAGP*CSRLHA Trigger: AGCATGTAATCGACTACATCAGGGACCTGCAGCTGG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | AAGATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGATAAGCAGGACGTTCACCTaGTGCTCGTCCAGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KMRSSAGTHAACEHQSEISRTFT*CSSSKA Trigger: CGCCTTGCTGGACGAGCAGCAGGTGAACGTCCTGCT...TATCTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCATCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR GCA 90 bp | ATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGATAAGGGCAGGATCTCCACCTTaGTCACTTTGCGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: MRSSAGTHAACEHQSEIRAGSPP*SLCGSG Trigger: CCCAGAACCGCAAAGTGAGCAAGGTGGAGATCCTGC...CCTTATCTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS GCA 90 bp | AAGGCGGGCAGGCGCGTCCCAGCGCAGCGCGAGATGGCCACGCTTTaGTCCGACAGACCAAGTACCACCTCGCCCGCTGTCCTGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: KAGRRVPAQREMATL*SDRPSTTSPAVLPA Trigger: GGCGGGCAGGACAGCGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTGCCCGCCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS CCA 90 bp | GCTCGTCCAGCAAGGCGGGCAGGCGCGTCCCAGCGCAGCGCGAGATaGCCACGCTTTGCTCCGACAGACCAAGTACCACCTCGCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: ARPARRAGASQRSAR*PRFAPTDQVPPRPL Trigger: CAGCGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTGCCCGCCTTGCTGGACGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCTCCACCTTGCTCACTTaGCGGTTCTGGGGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRSTLLT*RFWGRV Trigger: CACCCTGCCCCAGAACCGCAAAGTGAGCAAGGTGGA...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCCGAGATGGCCACGCTTaGCTCCGACAGACCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRRDGHA*LRQTKY Trigger: GTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCG...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS GCA 90 bp | GCCTCCCGTGGCCTCGGTTTCCCACTGAAGAATAATGTAATACTCTaGCTCGGACCTCACCTCGGCCGCCAAGGCACTGATCTCGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: ASRGLGFPLKNNVIL*LGPHLGRQGTDLAV Trigger: AACGGCGAGATCAGTGCCTTGGCGGCCGAGGTGAGGTCCGAGGCAGAGTATTACATTATTCTTCAGTGGGAAACCGAGGCCACGGGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR CAA 90 bp | ATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGATAAGGTCCACCTTGCTCACTTaGCGGTTCTGGGGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: MRSSAGTHAACEHQSEIRSTLLT*RFWGRV Trigger: CACCCTGCCCCAGAACCGCAAAGTGAGCAAGGTGGA...CCTTATCTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCTCTTGCCTCCTGAAGGGCTGGAGTCCATCTGGTCCCTCAGTGCGCCGCTGCAGGATCTCCACCTaGCTCACTTTGCGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FSSCLLKGWSPSGPSVRRCRIST*LTLRFW Trigger: CCAGAACCGCAAAGTGAGCAAGGTGGAGATCCTGCA...GCGGCGCACTGAGGGACCAGATGGACTCCAGCCCTTCAGGAGGCAAGAGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS-3UTR CAA 90 bp | AAGATGCGATCGTCGGCTGGAACACATGCCGCCTGTGAACACCAGAGCGAGATACGAGATGGCCACGCTTaGCTCCGACAGACCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: KMRSSAGTHAACEHQSEIRDGHA*LRQTKY Trigger: GTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCG...TATCTCGCTCTGGTGTTCACAGGCGGCATGTGTTCCAGCCGACGATCGCATCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109824.2 |
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| CDS CAA 90 bp | CAAGGCGGGCAGGCGCGTCCCAGCGCAGCGCGAGATGGCCACGCTTaGCTCCGACAGACCAAGTACCACCTCGCCCGCTGTCCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QGGQARPSAARDGHA*LRQTKYHLARCPAR Trigger: GCGGGCAGGACAGCGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTGCCCGCCTTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS GCA 72 bp | CGCTGTCCTGCCCGCCTTCAGCGAACAGCTAGGGCCTaGAGCGGCTGCGGCACTGCCACTGGCGACCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: RCPARLQRTARA*SGCGTATGDLH Trigger: ATGAAGGTCGCCAGTGGCAGTGCCGCAGCCGCTGCAGGCCCTAGCTGTTCGCTGAAGGCGGGCAGGACAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS GCA 72 bp | AGGCGCGTCCCAGCGCAGCGCGAGATGGCCACGCTTTaGTCCGACAGACCAAGTACCACCTCGCCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RRVPAQREMATL*SDRPSTTSPAV Trigger: GACAGCGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS CCA 72 bp | GCAAGGCGGGCAGGCGCGTCCCAGCGCAGCGCGAGATaGCCACGCTTTGCTCCGACAGACCAAGTACCACCT | + |
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Preference number: 6 (lower is better) Translates to: ARRAGASQRSAR*PRFAPTDQVPP Trigger: AGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTGCCCGCCTTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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| CDS CAA 72 bp | CAGGCGCGTCCCAGCGCAGCGCGAGATGGCCACGCTTaGCTCCGACAGACCAAGTACCACCTCGCCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QARPSAARDGHA*LRQTKYHLARC Trigger: ACAGCGGGCGAGGTGGTACTTGGTCTGTCGGAGCAAAGCGTGGCCATCTCGCGCTGCGCTGGGACGCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038368.9 ENSMUST00000109824.2 |
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