Pregenerated sensors for ICOSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000732Ensembl transcript IDs: ENSMUST00000105393.3, ENSMUST00000219038.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCCAGGTCCTGGGCTGGAGAGTTCAGGGTTGGGGGCAGGGTATaGCAGGTAGGGACTGAGGGATGCTGGGAGAACCTGGAAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: QPRSWAGEFRVGGRV*QVGTEGCWENLEAR Trigger: CCTGGCTTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGGCATACCCTGCCCCCAACCCTGAACTCTCCAGCCCAGGACCTGGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR TCA 90 bp | TGCTGCTCTCTGTGCCGACAGCTCACCGGAGGCTCCATATTCCGATaGTGTTGCTGCTGCCCACTGGAGAGATCTCCCTCGGGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CCSLCRQLTGGSIFR*CCCCPLERSPSGFL Trigger: CAGAAACCCCGAGGGAGATCTCTCCAGTGGGCAGCAGCAACATCATCGGAATATGGAGCCTCCGGTGAGCTGTCGGCACAGAGAGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR TCA 90 bp | ACACATCCATCAGCACTGAGCCCCAGCCACATAGCAGACAGGCCTTaGCGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: THPSALSPSHIADRP*RSRISSPLRGKELA Trigger: GGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGCCTGTCTGCTATGTGGCTGGGGCTCAGTGCTGATGGATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR GCA 90 bp | GGTAAGAGGGGAGTGCTCCCAGGATTCCACAAGAAGGTGGGGGCCTaGTGGAATCAGCAGGTGATGGTGACTGTACAGCCAGTGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GKRGVLPGFHKKVGA*WNQQVMVTVQPVVC Trigger: ACAGACCACTGGCTGTACAGTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAGCACTCCCCTCTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CCA 90 bp | ACAGCCCATAAGCAGACAGCTCGTTGTCCTCTGTCACCAGGCCTGTaGGGGTCCACTCTGAAGTTGTGTCTGACATCCACCTGGTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TAHKQTARCPLSPGL*GSTLKLCLTSTWWQ Trigger: TTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTGGACCCCCACAGGCCTGGTGACAGAGGACAACGAGCTGTCTGCTTATGGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CCA 90 bp | AAGAGGGGAGTGCTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTaGAATCAGCAGGTGATGGTGACTGTACAGCCAGTGGTCTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: KRGVLPGFHKKVGAC*NQQVMVTVQPVVCE Trigger: TTCACAGACCACTGGCTGTACAGTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAGCACTCCCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR GCA 90 bp | CTAGGCCTGAGTAGTAACGTGCCAAGGAAGGATCTTCTCACAAGCTaGTGCTCTCTGTGCCGACAGCTCACCGGAGGCTCCATATTCCGA | + |
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Preference number: 1 (lower is better) Translates to: LGLSSNVPRKDLLTS*CSLCRQLTGGSIFR Trigger: TCGGAATATGGAGCCTCCGGTGAGCTGTCGGCACAGAGAGCAGCAGCTTGTGAGAAGATCCTTCCTTGGCACGTTACTACTCAGGCCTAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR TCA 90 bp | ACAGGTCTTCCTAGTCCTGAGCCCAGGGTTCTCACTCCTCATTCCTaGGATCTCACACATCCATCAGCACTGAGCCCCAGCCACATAGCA | + |
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Preference number: 1 (lower is better) Translates to: TGLPSPEPRVLTPHS*DLTHPSALSPSHIA Trigger: TGCTATGTGGCTGGGGCTCAGTGCTGATGGATGTGTGAGATCTCAGGAATGAGGAGTGAGAACCCTGGGCTCAGGACTAGGAAGACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CCA 90 bp | CTCTGGGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTaGAATATGCCTTCTTTTCTGCATCTGGCTCGGTCTCCAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LWDLPSGTSDVYAMG*NMPSFLHLARSPAL Trigger: CAGAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR TCA 90 bp | AACACGGAGACCCAGGAAGCTGGAGTTGAGATCTTCATGGGCTGCTaGGACTGGGCAGAGCTGTTCAGTCTGAAAGAGCTCAAGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: NTETQEAGVEIFMGC*DWAELFSLKELKAF Trigger: GAAAGCCTTGAGCTCTTTCAGACTGAACAGCTCTGCCCAGTCTCAGCAGCCCATGAAGATCTCAACTCCAGCTTCCTGGGTCTCCGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR TCA 90 bp | ACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACGGTaGATTTGGGCTCTGGGATCTCCCCAGTGGCACCTCAGATGTCTA | + |
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Preference number: 1 (lower is better) Translates to: TSVPCPGSETKHYSR*IWALGSPQWHLRCL Trigger: TAGACATCTGAGGTGCCACTGGGGAGATCCCAGAGCCCAAATTCACCGTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR GCA 90 bp | GCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTaGATCTGGCTCGGTCTCCAGCTCTGTGAGTATGGTTGGGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: APQMSMQWAGICLLF*IWLGLQLCEYGWVP Trigger: AGGAACCCAACCATACTCACAGAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR GCA 90 bp | ATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATaGCTTCTTTTCTGCATCTGGCTCGGTCTCCAGCTCTGTGAGTAT | + |
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Preference number: 1 (lower is better) Translates to: ISPVAPQMSMQWAGI*LLFCIWLGLQLCEY Trigger: ATACTCACAGAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR TCA 90 bp | GGCAGTGTGTCTGGTGCCCCAAGGCGGCTAGCTGGCTTGCTGAGTTaGCCTCTTTCTGAACCTAAACTACGTCTGACAAGAAAAGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GSVSGAPRRLAGLLS*PLSEPKLRLTRKVK Trigger: TTTAACTTTTCTTGTCAGACGTAGTTTAGGTTCAGAAAGAGGTCAACTCAGCAAGCCAGCTAGCCGCCTTGGGGCACCAGACACACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CCA 90 bp | CAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTaGCTCGGTCTCCAGCTCTGTGAGTATGGTTGGGTTCCTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: QMSMQWAGICLLFCI*LGLQLCEYGWVPAL Trigger: AAGAGCAGGAACCCAACCATACTCACAGAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR TCA 90 bp | CATACATCCCTAGGTTTCCAAGCAGCCAACTTTGCAGAACCATCTTaGAACAAAAGAGCTAGCTCTATTCTGGCCAGCAACACGGAGACC | + |
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Preference number: 1 (lower is better) Translates to: HTSLGFQAANFAEPS*NKRASSILASNTET Trigger: GGTCTCCGTGTTGCTGGCCAGAATAGAGCTAGCTCTTTTGTTTCAAGATGGTTCTGCAAAGTTGGCTGCTTGGAAACCTAGGGATGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR GCA 90 bp | TGCTGGGAGAACCTGGAAGCCAGGTCCGTTTTGATGTGTAAAATATaGACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCA | + |
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Preference number: 1 (lower is better) Translates to: CWENLEARSVLMCKI*TSVPCPGSETKHYS Trigger: TGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATATTTTACACATCAAAACGGACCTGGCTTCCAGGTTCTCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR CCA 90 bp | CCAACTTTGCAGAACCATCTTGAAACAAAAGAGCTAGCTCTATTCTaGCCAGCAACACGGAGACCCAGGAAGCTGGAGTTGAGATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: PTLQNHLETKELALF*PATRRPRKLELRSS Trigger: TGAAGATCTCAACTCCAGCTTCCTGGGTCTCCGTGTTGCTGGCCAGAATAGAGCTAGCTCTTTTGTTTCAAGATGGTTCTGCAAAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CAA 90 bp | CTCTCTGTGCCGACAGCTCACCGGAGGCTCCATATTCCGATGATGTaGCTGCTGCCCACTGGAGAGATCTCCCTCGGGGTTTCTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: LSVPTAHRRLHIPMM*LLPTGEISLGVSGM Trigger: CATCCCAGAAACCCCGAGGGAGATCTCTCCAGTGGGCAGCAGCAACATCATCGGAATATGGAGCCTCCGGTGAGCTGTCGGCACAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGTTCCAGTCCTCTGCGTaGGAAGGAGCTTGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LPGFHKKVGACWNQQVMVFQSSA*EGACPH Trigger: GTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAA...CACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CAA 90 bp | GCTCGTTGTCCTCTGTCACCAGGCCTGTGGGGGTCCACTCTGAAGTaGTGTCTGACATCCACCTGGTGGCAACTCACAGAAACCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: ARCPLSPGLWGSTLK*CLTSTWWQLTETLS Trigger: GGACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTGGACCCCCACAGGCCTGGTGACAGAGGACAACGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CAA 90 bp | CACACATCCATCAGCACTGAGCCCCAGCCACATAGCAGACAGGCCTaGACGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HTSISTEPQPHSRQA*TVQNFQSSAWEGAC Trigger: GCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGCCTGTCTGCTATGTGGCTGGGGCTCAGTGCTGATGGATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGGAAGCTGGAGTTGAGATCTTCATGGGCTGCTGAGACTGGGCAGAGCGGCTTCCTCCCCAACTaGAGGTCCTGCAGGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: RPRKLELRSSWAAETGQSGFLPN*RSCRES Trigger: ACTTTCCCTGCAGGACCTTCAGTTGGGGAGGAAGCC...GCTCTGCCCAGTCTCAGCAGCCCATGAAGATCTCAACTCCAGCTTCCTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGACTGTACAGCCAGTGGTCCAGGAAGCTGGAGTTaGGATCTTCATGGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: EGGGLLESAGDGDCTASGPGSWS*DLHGLL Trigger: CAGCAGCCCATGAAGATCTCAACTCCAGCTTCCTGG...ACCACTGGCTGTACAGTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | GCACCCCATCTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTGCGTTGCTGCTGCCCACTaGAGAGATCTCCCTCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: APHLLAPQLLLVLVCCSCVAAAH*RDLPRG Trigger: ACCCCGAGGGAGATCTCTCCAGTGGGCAGCAGCAAC...GCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTTCACTAGGACCAAAGCCAGGAAAGTTGCCCTGGGGAAAGAGGTGGGAGGGGACTTCTGGCACCTaGCTGGAGCCTGCGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VSSLGPKPGKLPWGKRWEGTSGT*LEPAWS Trigger: AGACCACGCAGGCTCCAGCCAGGTGCCAGAAGTCCC...CTCCCACCTCTTTCCCCAGGGCAACTTTCCTGGCTTTGGTCCTAGTGAACTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTCACTAGGACCAAAGCCAGGAAAGTTGCCCTGGGGAAAGAGGTGGGAGGGGTGTAAGTGGGACTTCTaGCACCTGGCTGGAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSLGPKPGKLPWGKRWEGCKWDF*HLAGAC Trigger: GCAGGCTCCAGCCAGGTGCCAGAAGTCCCACTTACA...CCCCTCCCACCTCTTTCCCCAGGGCAACTTTCCTGGCTTTGGTCCTAGTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGAGGGAGAGAAGGGAGCATTAGATCATGAGCATCGAGCATCGAGAGAAGGGCAGCCCAGGTCCTaGGCTGGAGAGTTCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GEEGEKGALDHEHRASREGQPRS*AGEFRV Trigger: AACCCTGAACTCTCCAGCCCAGGACCTGGGCTGCCC...TTCTCTCGATGCTCGATGCTCATGATCTAATGCTCCCTTCTCTCCCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGGAGTTGAGATCTTCATaGGCTGCTGAGACTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPGFHKKVGACWNQQVMVELRSS*AAETGQ Trigger: CTGCCCAGTCTCAGCAGCCCATGAAGATCTCAACTC...CACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGACGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGCCCTCACGAGGCCCAAGTAGCCTaGGACCTAAATAAAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALTVQNFQSSAWEGACPHEAQVA*DLNKVR Trigger: CCTGACTTTATTTAGGTCTCAGGCTACTTGGGCCTC...GTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR TCA 90 bp | GGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCGGAGCCTGCGTGGTCTaGACAGATGAGACAGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GSPQWHLRCLCNGLEYAFGACVV*TDETVA Trigger: AGCCACTGTCTCATCTGTTCAGACCACGCAGGCTCC...GAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGAGGGAGAGAAGGGAGCATTAGATCATGAGCATCGAGCATCGAGAGAAGGTGAATTTGGGCTCTaGGATCTCCCCAGTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: GEEGEKGALDHEHRASREGEFGL*DLPSGT Trigger: GGTGCCACTGGGGAGATCCCAGAGCCCAAATTCACC...TTCTCTCGATGCTCGATGCTCATGATCTAATGCTCCCTTCTCTCCCTCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGACTGTACAGCCAGTGGTTTCTTGCACCCCAACTaGTCCTTGTGCTTGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: EGGGLLESAGDGDCTASGFLHPN*SLCLFA Trigger: AGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAA...ACCACTGGCTGTACAGTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | GATGAAGTCTCTGTGCCTCGTAAAGCCAGGGATTCCTGGCCTCCATCACAGCCCTGTCTGACATCCACCTaGTGGCAACTCACAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: DEVSVPRKARDSWPPSQPCLTST*WQLTET Trigger: GGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACA...GGGCTGTGATGGAGGCCAGGAATCCCTGGCTTTACGAGGCACAGAGACTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGTGAAGCTGAGTGCCTCTGAGCCCAACCATTGTCAGCCAGAAACAGGTTTGCTGTCACCAGGCCTGTaGGGGTCCACTCTGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: VVKLSASEPNHCQPETGLLSPGL*GSTLKL Trigger: CAACTTCAGAGTGGACCCCCACAGGCCTGGTGACAG...CAAACCTGTTTCTGGCTGACAATGGTTGGGCTCAGAGGCACTCAGCTTCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR GCA 90 bp | ATGTCTGGATTATATAGGGAGGAGCCTCTGGGGGAAGGGCAGCCCAGGTCCTGGCAATGGGCTGGAATATaGCTTCTTTTCTGCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: MSGLYREEPLGEGQPRSWQWAGI*LLFCIW Trigger: CCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTG...CCAGGACCTGGGCTGCCCTTCCCCCAGAGGCTCCTCCCTATATAATCCAGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGCTCGCTTCTGGCACCTGGCTaGAGCCTGCGTGGTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LRCLCNGLEYAFFSASGSLLAPG*SLRGLN Trigger: GTTCAGACCACGCAGGCTCCAGCCAGGTGCCAGAAG...CGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGACGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGCCCTCACAGCCAGAAACAGGTTTaGAGTAGACAAAATCCCACA | + |
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Preference number: 2 (lower is better) Translates to: ALTVQNFQSSAWEGACPHSQKQV*SRQNPT Trigger: TGTGGGATTTTGTCTACTGCAAACCTGTTTCTGGCT...GTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGAGGGAGAGAAGGGAGCATTAGATCATGAGCATCGAGCATCGAGAGAAGGGGTTCTATGCTGCTaGAGCAGAGCAGATCCATTA | + |
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Preference number: 2 (lower is better) Translates to: GEEGEKGALDHEHRASREGVLCC*SRADPL Trigger: TAATGGATCTGCTCTGCTCCAGCAGCATAGAACCCC...TTCTCTCGATGCTCGATGCTCATGATCTAATGCTCCCTTCTCTCCCTCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGCTCGGGCTTGGGGGTTCTATaGTGCTGGAGCAGAGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LRCLCNGLEYAFFSASGSGLGVL*CWSRAD Trigger: ATCTGCTCTGCTCCAGCAGCATAGAACCCCCAAGCC...CGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAATATGCACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACCAGATGTCTATGCAATaGGCTGGAATATGCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VKYAPQSLVLGLKPNTIHQMSMQ*AGICLL Trigger: AAGAAGGCATATTCCAGCCCATTGCATAGACATCTG...GTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATATTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR GCA 72 bp | TCCTGGGCTGGAGAGTTCAGGGTTGGGGGCAGGGTATaGCAGGTAGGGACTGAGGGATGCTGGGAGAACCTG | + |
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Preference number: 3 (lower is better) Translates to: SWAGEFRVGGRV*QVGTEGCWENL Trigger: CAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGGCATACCCTGCCCCCAACCCTGAACTCTCCAGCCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGCCCAAATGTCTGTCCTaGGGGGCGCTGCACCCCATC | + |
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Preference number: 3 (lower is better) Translates to: LPGFHKKVGACWNQQVMVPKCLS*GALHPI Trigger: GATGGGGTGCAGCGCCCCCAAGGACAGACATTTGGG...CACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR TCA 72 bp | CTGTGCCGACAGCTCACCGGAGGCTCCATATTCCGATaGTGTTGCTGCTGCCCACTGGAGAGATCTCCCTCG | + |
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Preference number: 3 (lower is better) Translates to: LCRQLTGGSIFR*CCCCPLERSPS Trigger: CGAGGGAGATCTCTCCAGTGGGCAGCAGCAACATCATCGGAATATGGAGCCTCCGGTGAGCTGTCGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CCA 72 bp | GGGGGCAGGGTATGCCAGGTAGGGACTGAGGGATGCTaGGAGAACCTGGAAGCCAGGTCCGTTTTGATGTGT | + |
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Preference number: 3 (lower is better) Translates to: GGRVCQVGTEGC*ENLEARSVLMC Trigger: ACACATCAAAACGGACCTGGCTTCCAGGTTCTCCCAGCATCCCTCAGTCCCTACCTGGCATACCCTGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR TCA 72 bp | TCTGGCCAGCAACACGGAGACCCAGGAAGCTGGAGTTaGGATCTTCATGGGCTGCTGAGACTGGGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SGQQHGDPGSWS*DLHGLLRLGRA Trigger: AGCTCTGCCCAGTCTCAGCAGCCCATGAAGATCTCAACTCCAGCTTCCTGGGTCTCCGTGTTGCTGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR GCA 72 bp | CAGACAGGCCTTGACGGTCCAGAATTTCCAGTCCTCTaGGTGGGAAGGAGCTTGCCCTCACCTAGGGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QTGLDGPEFPVL*VGRSLPSPRVR Trigger: TCTGACCCTAGGTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGCCTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | GGAGTGCTCCCAGGATTCCACAAGAAGGTGGGGGCCTaGTGGAATCAGCAGGTGATGGTGACTGTACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GVLPGFHKKVGA*WNQQVMVTVQP Trigger: TGGCTGTACAGTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAGCACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR TCA 72 bp | CCTAGTCCTGAGCCCAGGGTTCTCACTCCTCATTCCTaGGATCTCACACATCCATCAGCACTGAGCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSPEPRVLTPHS*DLTHPSALSPS Trigger: GCTGGGGCTCAGTGCTGATGGATGTGTGAGATCTCAGGAATGAGGAGTGAGAACCCTGGGCTCAGGACTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | GAGATCTCCCTCGGGGTTTCTGGGATGAAGTCTCTGTaGCTCGTAAAGCCAGGGATTCCTGGCCTCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: EISLGVSGMKSL*LVKPGIPGLHH Trigger: GTGATGGAGGCCAGGAATCCCTGGCTTTACGAGGCACAGAGACTTCATCCCAGAAACCCCGAGGGAGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | AGTAGTAACGTGCCAAGGAAGGATCTTCTCACAAGCTaGTGCTCTCTGTGCCGACAGCTCACCGGAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSNVPRKDLLTS*CSLCRQLTGGS Trigger: GGAGCCTCCGGTGAGCTGTCGGCACAGAGAGCAGCAGCTTGTGAGAAGATCCTTCCTTGGCACGTTACTACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | AAGCAGACAGCTCGTTGTCCTCTGTCACCAGGCCTGTaGGGGTCCACTCTGAAGTTGTGTCTGACATCCACC | + |
|
Preference number: 3 (lower is better) Translates to: KQTARCPLSPGL*GSTLKLCLTST Trigger: GGTGGATGTCAGACACAACTTCAGAGTGGACCCCCACAGGCCTGGTGACAGAGGACAACGAGCTGTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | ACTCCTACTGTGCTGCCGCAGACCCACCTGAGTTCCTaGGGAACTATGGGCATCAGGGAGACCACTAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TPTVLPQTHLSS*GTMGIRETTNS Trigger: GGAATTAGTGGTCTCCCTGATGCCCATAGTTCCCCAGGAACTCAGGTGGGTCTGCGGCAGCACAGTAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | AGTAACGTGCCAAGGAAGGATCTTCTCACAAGCTGCTaGTCTCTGTGCCGACAGCTCACCGGAGGCTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SNVPRKDLLTSC*SLCRQLTGGSI Trigger: TATGGAGCCTCCGGTGAGCTGTCGGCACAGAGAGCAGCAGCTTGTGAGAAGATCCTTCCTTGGCACGTTACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | GTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTaGCCTCACCTAGGGTCAGATACTGTGTTCCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: VQNFQSSAWEGA*PHLGSDTVFHR Trigger: CCGATGGAACACAGTATCTGACCCTAGGTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | GAGGCTCCATATTCCGATGATGTTGCTGCTGCCCACTaGAGAGATCTCCCTCGGGGTTTCTGGGATGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EAPYSDDVAAAH*RDLPRGFWDEV Trigger: GACTTCATCCCAGAAACCCCGAGGGAGATCTCTCCAGTGGGCAGCAGCAACATCATCGGAATATGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | TGCTCAGTAGACTCTGTAAGTGGGACTTCTGGCACCTaGCTGGAGCCTGCGTGGTCTGAACAGATGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CSVDSVSGTSGT*LEPAWSEQMRQ Trigger: CTGTCTCATCTGTTCAGACCACGCAGGCTCCAGCCAGGTGCCAGAAGTCCCACTTACAGAGTCTACTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR TCA 72 bp | CCTTGTCCTGGGTCTGAAACCAAACACTATTCACGGTaGATTTGGGCTCTGGGATCTCCCCAGTGGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCPGSETKHYSR*IWALGSPQWHL Trigger: GAGGTGCCACTGGGGAGATCCCAGAGCCCAAATTCACCGTGAATAGTGTTTGGTTTCAGACCCAGGACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR CCA 72 bp | GGGTCCACTCTGAAGTTGTGTCTGACATCCACCTGGTaGCAACTCACAGAAACCCTGTCCATATCCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSTLKLCLTSTW*QLTETLSISWA Trigger: TGCCCAGGATATGGACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | TGGGGGTCCACTCTGAAGTTGTGTCTGACATCCACCTaGTGGCAACTCACAGAAACCCTGTCCATATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGSTLKLCLTST*WQLTETLSISW Trigger: CCAGGATATGGACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTGGACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | CTGCACCCCATCTTCTTGCACCCCAACTGCTCCTTGTaGTTGTTTGCTGTAGCTGCCAACTCAAGACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LHPIFLHPNCSL*LFAVAANSRPI Trigger: TATGGGTCTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | GTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATaGCTTCTTTTCTGCATCTGGCTCGGTCTCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VAPQMSMQWAGI*LLFCIWLGLQL Trigger: GAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR CCA 72 bp | CTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTaGAATATGCCTTCTTTTCTGCATCTGGCTCGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSGTSDVYAMG*NMPSFLHLARS Trigger: AGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR CCA 72 bp | GGGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATaGGCTGGAATATGCCTTCTTTTCTGCATCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GISPVAPQMSMQ*AGICLLFCIWL Trigger: GAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGGTCTTAACCTGGGGCTaGGGGGTTCTATGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: APQMSMQWAGICLLFCIWVLTWG*GVLCCW Trigger: CCAGCAGCATAGAACCCCCAAGCCCCAGGTTAAGAC...CCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGCTCTGGGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGGATCCATTACATAGCTaGTGCTCAGTAGACTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FGLWDLPSGTSDVYAMGWDPLHS*CSVDSV Trigger: TACAGAGTCTACTGAGCACAAGCTATGTAATGGATC...CCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCCCAGAGCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR TCA 72 bp | AGGGATGCTGGGAGAACCTGGAAGCCAGGTCCGTTTTaGTGTGTAAAATATGCACCTCAGTCCCTTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RDAGRTWKPGPF*CVKYAPQSLVL Trigger: CAGGACAAGGGACTGAGGTGCATATTTTACACATCAAAACGGACCTGGCTTCCAGGTTCTCCCAGCATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR GCA 72 bp | TGCTGCTGGAGCAGAGCAGATCCATTACATAGCTTGTaGTCAGTAGACTCTGTAAGTGGGACTTCTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: CCWSRADPLHSL*SVDSVSGTSGT Trigger: GGTGCCAGAAGTCCCACTTACAGAGTCTACTGAGCACAAGCTATGTAATGGATCTGCTCTGCTCCAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR GCA 72 bp | GCTCTGGGATCTCCCCAGTGGCACCTCAGATGTCTATaGAATGGGCTGGAATATGCCTTCTTTTCTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ALGSPQWHLRCL*NGLEYAFFSAS Trigger: AGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR GCA 72 bp | CCTCTGAGCCCAACCATTGTCAGCCAGAAACAGGTTTaGAGTAGACAAAATCCCACATATCCTCGAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLSPTIVSQKQV*SRQNPTYPRRG Trigger: GCCTCTTCGAGGATATGTGGGATTTTGTCTACTGCAAACCTGTTTCTGGCTGACAATGGTTGGGCTCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | CAGAACCATCTTGAAACAAAAGAGCTAGCTCTATTCTaGCCAGCAACACGGAGACCCAGGAAGCTGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QNHLETKELALF*PATRRPRKLEL Trigger: CAACTCCAGCTTCCTGGGTCTCCGTGTTGCTGGCCAGAATAGAGCTAGCTCTTTTGTTTCAAGATGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CCA 72 bp | AATGTCTTAACCTGGGGCTTGGGGGTTCTATGCTGCTaGAGCAGAGCAGATCCATTACATAGCTTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NVLTWGLGVLCC*SRADPLHSLCS Trigger: TGAGCACAAGCTATGTAATGGATCTGCTCTGCTCCAGCAGCATAGAACCCCCAAGCCCCAGGTTAAGACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR CCA 72 bp | ATGGTTGGGTTCCTGCTCTTTAAAAATGTCTTAACCTaGGGCTTGGGGGTTCTATGCTGCTGGAGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MVGFLLFKNVLT*GLGVLCCWSRA Trigger: TGCTCTGCTCCAGCAGCATAGAACCCCCAAGCCCCAGGTTAAGACATTTTTAAAGAGCAGGAACCCAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR GCA 72 bp | GCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTaGCAACTCAAGACCCATAACAACAGTTGCTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: APQLLLVLVCCS*QLKTHNNSCYS Trigger: AGAATAGCAACTGTTGTTATGGGTCTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | CATCTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTaGTGTAGCTGCCAACTCAAGACCCATAACAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: HLLAPQLLLVLV*CSCQLKTHNNS Trigger: ACTGTTGTTATGGGTCTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | ATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTaGATCTGGCTCGGTCTCCAGCTCTGTGAGTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: MSMQWAGICLLF*IWLGLQLCEYG Trigger: ACCATACTCACAGAGCTGGAGACCGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR CCA 72 bp | GGAAAGTCTCCAGTAGACTCTGTAGGGCTTTCAGAGTaGCTCAAACGCTCTTTTATAAAGCTCCTAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GKSPVDSVGLSE*LKRSFIKLLGL Trigger: CAGGCCTAGGAGCTTTATAAAAGAGCGTTTGAGCCACTCTGAAAGCCCTACAGAGTCTACTGGAGACTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR GCA 72 bp | AACCTGGAAGCCAGGTCCGTTTTGATGTGTAAAATATaGACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLEARSVLMCKI*TSVPCPGSETK Trigger: TTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATATTTTACACATCAAAACGGACCTGGCTTCCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| 3UTR TCA 72 bp | CTAGGTTTCCAAGCAGCCAACTTTGCAGAACCATCTTaGAACAAAAGAGCTAGCTCTATTCTGGCCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LGFQAANFAEPS*NKRASSILASN Trigger: GTTGCTGGCCAGAATAGAGCTAGCTCTTTTGTTTCAAGATGGTTCTGCAAAGTTGGCTGCTTGGAAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR TCA 72 bp | TATATAAAGGTGGGTTTATTGGGAATCACTCTCAGGTaGGTTAGTTCACTAGGACCAAAGCCAGGAAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YIKVGLLGITLR*VSSLGPKPGKL Trigger: CAACTTTCCTGGCTTTGGTCCTAGTGAACTAACTCACCTGAGAGTGATTCCCAATAAACCCACCTTTATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGACCGACTTCAGTCTCTaGAGAGGCAGCACAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGFHKKVGACWNQQVMVTDFSL*RGSTEA Trigger: AGCCTCTGTGCTGCCTCTGCAGAGACTGAAGTCGGT...CACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | AATGTCTTAACCTGGGGCTTGGGGGTTCTATGCTGCTGGAGCAGAGCAGATCCAGGGGGTCAATGCAGCTaGGCACCACATTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLTWGLGVLCCWSRADPGGQCS*APHCCP Trigger: TGGGCAGCAATGTGGTGCTCAGCTGCATTGACCCCC...TGGATCTGCTCTGCTCCAGCAGCATAGAACCCCCAAGCCCCAGGTTAAGACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTGACGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGCCCTCACAGGCAGCACAGAGGCTaGTCAACAGCAGCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALTVQNFQSSAWEGACPHRQHRG*STAART Trigger: TGTTCTTGCTGCTGTTGAGCAGCCTCTGTGCTGCCT...GTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTGACGGTCCAGAATTTCCAGTCCTCTGCGTGGGAAGGAGCTTGCCCTCACTGTACTGAAGTTTGCTaGCACACGCAGCCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTVQNFQSSAWEGACPHCTEVC*HTQPDH Trigger: GTGGTCAGGCTGCGTGTGGCAGCAAACTTCAGTACA...GTGAGGGCAAGCTCCTTCCCACGCAGAGGACTGGAAATTCTGGACCGTCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CAA 72 bp | CCTCTGTCACCAGGCCTGTGGGGGTCCACTCTGAAGTaGTGTCTGACATCCACCTGGTGGCAACTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGLWGSTLK*CLTSTWWQLTE Trigger: TTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTGGACCCCCACAGGCCTGGTGACAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CAA 72 bp | GCGCTGCACCCCATCTTCTTGCACCCCAACTGCTCCTaGTGCTTGTTTGCTGTAGCTGCCAACTCAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ALHPIFLHPNCS*CLFAVAANSRP Trigger: GGGTCTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGCAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | GTTGTGAAGCTGAGTGCCTCTGAGCCCAACCATTGTCAGCCAGAAACAGGTTTGGGGGGTCAATGCAGCTaGGCACCACATTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVKLSASEPNHCQPETGLGGQCS*APHCCP Trigger: TGGGCAGCAATGTGGTGCTCAGCTGCATTGACCCCC...CAAACCTGTTTCTGGCTGACAATGGTTGGGCTCAGAGGCACTCAGCTTCACAAC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | GTTAGTTCACTAGGACCAAAGCCAGGAAAGTTGCCCTGGGGAAAGAGGTGGGAGCTGCCACACGCAGCCTaGCCACCTCTTCCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGPKPGKLPWGKRWELPHAA*PPLPRS Trigger: AGATCTTGGAAGAGGTGGTCAGGCTGCGTGTGGCAG...CTCCCACCTCTTTCCCCAGGGCAACTTTCCTGGCTTTGGTCCTAGTGAACTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGTTCTTCCAAACAGGCTaGCTGGTTCCCAAGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LPGFHKKVGACWNQQVMVFFQTG*LVPKDT Trigger: TGTGTCCTTGGGAACCAGGCAGCCTGTTTGGAAGAA...CACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | GCACCCCATCTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTGCGGGTATCCTGAGGGGTaGCATTCTTCAGGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APHLLAPQLLLVLVCCSCGYPEG*HSSGTE Trigger: CTCTGTACCTGAAGAATGTCACCCCTCAGGATACCC...GCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | CACTCTGAAGTTGTGTCTGACATCCACCTGGTGGCAACTCACAGAAACCCTGTCCTGCCACACGCAGCCTaGCCACCTCTTCCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSEVVSDIHLVATHRNPVLPHAA*PPLPRS Trigger: AGATCTTGGAAGAGGTGGTCAGGCTGCGTGTGGCAG...GACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGGATTATATAGGGAGGAGCCTCTGGGGGAAGGGCAGCCCAGGTCCTGGGGAGCCTTAATGTGCTaGTTACATCATACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSGLYREEPLGEGQPRSWGALMC*LHHTGP Trigger: TGGGCCTGTATGATGTAATCAGCACATTAAGGCTCC...CCAGGACCTGGGCTGCCCTTCCCCCAGAGGCTCCTCCCTATATAATCCAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGGCTCTGGGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGTTCTTCCAAACAGGCTaGCTGGTTCCCAAGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: FGLWDLPSGTSDVYAMGWFFQTG*LVPKDT Trigger: TGTGTCCTTGGGAACCAGGCAGCCTGTTTGGAAGAA...CCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCCCAGAGCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAGTCTCTGTGCCTCGTAAAGCCAGGGATTCCTGGCCTCCATCACAGCCCAGAGAGAAGTTACCCTaGTTCATGGAGTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DEVSVPRKARDSWPPSQPREKLP*FMESRD Trigger: GTCCCTGGACTCCATGAAGCAGGGTAACTTCTCTCT...GGGCTGTGATGGAGGCCAGGAATCCCTGGCTTTACGAGGCACAGAGACTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGCCGACAGCTCACCGGAGGCTCCATATTCCGATGATGTTGCTGCTGCCAGCCATTCTTGGACATaGAGGTGTAGGTACGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCADSSPEAPYSDDVAAASHSWT*RCRYVP Trigger: AGGAACGTACCTACACCTGCATGTCCAAGAATGGCT...GGCAGCAGCAACATCATCGGAATATGGAGCCTCCGGTGAGCTGTCGGCACAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR CCA 90 bp | GCACCCCATCTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTGCAGTTACCCTGCTTCATaGAGTCCAGGGACAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: APHLLAPQLLLVLVCCSCSYPAS*SPGTDG Trigger: GCCATCTGTCCCTGGACTCCATGAAGCAGGGTAACT...GCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| CDS-3UTR GCA 90 bp | AATGTCTTAACCTGGGGCTTGGGGGTTCTATGCTGCTGGAGCAGAGCAGATCCAAGGCAGCACAGAGGCTaGTCAACAGCAGCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NVLTWGLGVLCCWSRADPRQHRG*STAART Trigger: TGTTCTTGCTGCTGTTGAGCAGCCTCTGTGCTGCCT...TGGATCTGCTCTGCTCCAGCAGCATAGAACCCCCAAGCCCCAGGTTAAGACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGGAGGGAGAGAAGGGAGCATTAGATCATGAGCATCGAGCATCGAGAGAATGTACTGAAGTTTGCTaGCACACGCAGCCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEEGEKGALDHEHRASRECTEVC*HTQPDH Trigger: GTGGTCAGGCTGCGTGTGGCAGCAAACTTCAGTACA...TTCTCTCGATGCTCGATGCTCATGATCTAATGCTCCCTTCTCTCCCTCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGTCTCTGTGCCTCGTAAAGCCAGGGATTCCTGGCCTCCATCACAGCCCATACAGGTTGGGCTCTaGGTAGCCATTCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DEVSVPRKARDSWPPSQPIQVGL*VAILGH Trigger: ATGTCCAAGAATGGCTACCCAGAGCCCAACCTGTAT...GGGCTGTGATGGAGGCCAGGAATCCCTGGCTTTACGAGGCACAGAGACTTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR TCA 90 bp | AGACCCAGGAAGCTGGAGTTGAGATCTTCATGGGCTGCTGAGACTGGGCAGAGCCCTCTTCCAAGATCTTaGCTAACTCTGTGGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RPRKLELRSSWAAETGQSPLPRS*LTLWLY Trigger: ATACAGCCACAGAGTTAGTCAAGATCTTGGAAGAGG...GCTCTGCCCAGTCTCAGCAGCCCATGAAGATCTCAACTCCAGCTTCCTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR TCA 90 bp | GATTCCTGGCCTCCATCACAGCCCATAAGCAGACAGCTCGTTGTCCTCTGTCACTATTGTCCGTTGTGTTaGTCCAATACAGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSWPPSQPISRQLVVLCHYCPLC*SNTGWA Trigger: AGCCCAACCTGTATTGGATCAACACAACGGACAATA...GTGACAGAGGACAACGAGCTGTCTGCTTATGGGCTGTGATGGAGGCCAGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR CCA 90 bp | GGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCAACCCGCTAGAAACATaGAGCTTCTTCCAAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPQWHLRCLCNGLEYAFNPLET*SFFQTG Trigger: GCCTGTTTGGAAGAAGCTCCATGTTTCTAGCGGGTT...GAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CCA 90 bp | CTGAAACCAAACACTATTCACGGTGAATTTGGGCTCTGGGATCTCCCCAGTGGCCCACTCAAGTTGAAATaGCGTCTGTGGGGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKPNTIHGEFGLWDLPSGPLKLK*RLWGSM Trigger: CATTGACCCCCACAGACGCCATTTCAACTTGAGTGG...GCCACTGGGGAGATCCCAGAGCCCAAATTCACCGTGAATAGTGTTTGGTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CCA 90 bp | GGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCATACAGGTTGGGCTCTaGGTAGCCATTCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPQWHLRCLCNGLEYAFIQVGL*VAILGH Trigger: ATGTCCAAGAATGGCTACCCAGAGCCCAACCTGTAT...GAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| 3UTR CAA 72 bp | CACCCCATCTTCTTGCACCCCAACTGCTCCTTGTGCTaGTTTGCTGTAGCTGCCAACTCAAGACCCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: HPIFLHPNCSLC*FAVAANSRPIT Trigger: TGTTATGGGTCTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| 3UTR CAA 72 bp | GAGGGATGCTGGGAGAACCTGGAAGCCAGGTCCGTTTaGATGTGTAAAATATGCACCTCAGTCCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGCWENLEARSV*MCKICTSVPCP Trigger: AGGACAAGGGACTGAGGTGCATATTTTACACATCAAAACGGACCTGGCTTCCAGGTTCTCCCAGCATCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR TCA 90 bp | TATGCACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACGGTGAAGGGTATCCTGAGGGGTaGCATTCTTCAGGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YAPQSLVLGLKPNTIHGEGYPEG*HSSGTE Trigger: CTCTGTACCTGAAGAATGTCACCCCTCAGGATACCC...TTCACCGTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR TCA 90 bp | CACTCTGAAGTTGTGTCTGACATCCACCTGGTGGCAACTCACAGAAACCCTGTCGGAGCCTTAATGTGCTaGTTACATCATACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSEVVSDIHLVATHRNPVGALMC*LHHTGP Trigger: TGGGCCTGTATGATGTAATCAGCACATTAAGGCTCC...GACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
||
| 3UTR CAA 72 bp | CTATGCTGCTGGAGCAGAGCAGATCCATTACATAGCTaGTGCTCAGTAGACTCTGTAAGTGGGACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCCWSRADPLHS*CSVDSVSGTSG Trigger: GCCAGAAGTCCCACTTACAGAGTCTACTGAGCACAAGCTATGTAATGGATCTGCTCTGCTCCAGCAGCATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR GCA 90 bp | TATGCACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACGGTGAAAGAGAGAAGTTACCCTaGTTCATGGAGTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YAPQSLVLGLKPNTIHGEREKLP*FMESRD Trigger: GTCCCTGGACTCCATGAAGCAGGGTAACTTCTCTCT...TTCACCGTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CCA 90 bp | GCACCCCATCTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTGCATTGTGGGTTTCCTGTaGGTTCTTTGTGTTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APHLLAPQLLLVLVCCSCIVGFL*VLCVIS Trigger: GGAAATAACACAAAGAACCCACAGGAAACCCACAAT...GCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAGATGGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR GCA 90 bp | GCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGAGCCATTCTTGGACATaGAGGTGTAGGTACGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APQMSMQWAGICLLFCIWSHSWT*RCRYVP Trigger: AGGAACGTACCTACACCTGCATGTCCAAGAATGGCT...CCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR GCA 90 bp | CACTCTGAAGTTGTGTCTGACATCCACCTGGTGGCAACTCACAGAAACCCTGTCTCCAGTGAAACTTTCTaGCTGGCTAATGCTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSEVVSDIHLVATHRNPVSSETF*LANASD Trigger: ATCACTAGCATTAGCCAGGCAGAAAGTTTCACTGGA...GACAGGGTTTCTGTGAGTTGCCACCAGGTGGATGTCAGACACAACTTCAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR CCA 90 bp | CTGAAACCAAACACTATTCACGGTGAATTTGGGCTCTGGGATCTCCCCAGTGGCATTGTGGGTTTCCTGTaGGTTCTTTGTGTTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKPNTIHGEFGLWDLPSGIVGFL*VLCVIS Trigger: GGAAATAACACAAAGAACCCACAGGAAACCCACAAT...GCCACTGGGGAGATCCCAGAGCCCAAATTCACCGTGAATAGTGTTTGGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR GCA 90 bp | TATGCACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACGGTGAATCCAGTGAAACTTTCTaGCTGGCTAATGCTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YAPQSLVLGLKPNTIHGESSETF*LANASD Trigger: ATCACTAGCATTAGCCAGGCAGAAAGTTTCACTGGA...TTCACCGTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
||
| CDS-3UTR CCA 90 bp | ACATACATCCCTAGGTTTCCAAGCAGCCAACTTTGCAGAACCATCTTGAAACAACCACTCAAGTTGAAATaGCGTCTGTGGGGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TYIPRFPSSQLCRTILKQPLKLK*RLWGSM Trigger: CATTGACCCCCACAGACGCCATTTCAACTTGAGTGG...TTGTTTCAAGATGGTTCTGCAAAGTTGGCTGCTTGGAAACCTAGGGATGTATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR CCA 90 bp | GGATCTCCCCAGTGGCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTAACTCATTATTGTaGGTTTCCTGTGGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPQWHLRCLCNGLEYAFFNSLL*VSCGFF Trigger: AAAGAACCCACAGGAAACCCACAATAATGAGTTAAA...GAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGCCACTGGGGAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR TCA 90 bp | GTAAAATATGCACCTCAGTCCCTTGTCCTGGGTCTGAAACCAAACACTATTCACTATTGTCCGTTGTGTTaGTCCAATACAGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKYAPQSLVLGLKPNTIHYCPLC*SNTGWA Trigger: AGCCCAACCTGTATTGGATCAACACAACGGACAATA...GTGAATAGTGTTTGGTTTCAGACCCAGGACAAGGGACTGAGGTGCATATTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CCA 90 bp | ACATACATCCCTAGGTTTCCAAGCAGCCAACTTTGCAGAACCATCTTGAAACAAAACCCGCTAGAAACATaGAGCTTCTTCCAAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYIPRFPSSQLCRTILKQNPLET*SFFQTG Trigger: GCCTGTTTGGAAGAAGCTCCATGTTTCTAGCGGGTT...TTGTTTCAAGATGGTTCTGCAAAGTTGGCTGCTTGGAAACCTAGGGATGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR CCA 90 bp | CTTCTTGCACCCCAACTGCTCCTTGTGCTTGTTTGCTGTAGCTGCCAACTCAAGTTTAACTCATTATTGTaGGTTTCCTGTGGGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAPQLLLVLVCCSCQLKFNSLL*VSCGFF Trigger: AAAGAACCCACAGGAAACCCACAATAATGAGTTAAA...CTTGAGTTGGCAGCTACAGCAAACAAGCACAAGGAGCAGTTGGGGTGCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS-3UTR CAA 90 bp | GATGAAGTCTCTGTGCCTCGTAAAGCCAGGGATTCCTGGCCTCCATCACAGCCCCAGCTGAGCACCACATaGCTGCCCACCATTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: DEVSVPRKARDSWPPSQPQLSTT*LPTIAP Trigger: CGGTGCAATGGTGGGCAGCAATGTGGTGCTCAGCTG...GGGCTGTGATGGAGGCCAGGAATCCCTGGCTTTACGAGGCACAGAGACTTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS GCA 90 bp | TCTGTGGGGGTCAATGCAGCTGAGCACCACATTGCTGCCCACCATTaGACCGACTTCAGTCTCTGCAGAGGCAGCACAGAGGCTGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVGVNAAEHHIAAHH*TDFSLCRGSTEAAQ Trigger: TTGAGCAGCCTCTGTGCTGCCTCTGCAGAGACTGAAGTCGGTGCAATGGTGGGCAGCAATGTGGTGCTCAGCTGCATTGACCCCCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS GCA 90 bp | CCACCATTGCACCGACTTCAGTCTCTGCAGAGGCAGCACAGAGGCTaGTCAACAGCAGCAAGAACAGACCAAGACCAGAAAAGAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLHRLQSLQRQHRG*STAARTDQDQKRTR Trigger: GCGGGTTCTTTTCTGGTCTTGGTCTGTTCTTGCTGCTGTTGAGCAGCCTCTGTGCTGCCTCTGCAGAGACTGAAGTCGGTGCAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS-3UTR CAA 90 bp | GCACCTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGCAGCTGAGCACCACATaGCTGCCCACCATTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: APQMSMQWAGICLLFCIWQLSTT*LPTIAP Trigger: CGGTGCAATGGTGGGCAGCAATGTGGTGCTCAGCTG...CCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGATTCCACAAGAAGGTGGGGGCCTGCTGGAATCAGCAGGTGATGGTGACTTCTGGGTTTTCGATTaGCCAATAGACATACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PRIPQEGGGLLESAGDGDFWVFD*PIDIQT Trigger: GGTCTGTATGTCTATTGGCAAATCGAAAACCCAGAA...GTCACCATCACCTGCTGATTCCAGCAGGCCCCCACCTTCTTGTGGAATCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS CCA 90 bp | GGACAGATGGCCCCTGTTCTTGTAGGAACTGTCCACATTGATCCCTaGAGACTTGTAAGGCAGGTAGTAAGTCACCGAAACTTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQMAPVLVGTVHIDP*RLVRQVVSHRNFWV Trigger: AACCCAGAAGTTTCGGTGACTTACTACCTGCCTTACAAGTCTCCAGGGATCAATGTGGACAGTTCCTACAAGAACAGGGGCCATCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS-3UTR CAA 90 bp | GAAGACAAAATGTCTGGATTATATAGGGAGGAGCCTCTGGGGGAAGGGCAGCCCGGTAAACCACGTGTTTaGAGGCATGGAGACATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EDKMSGLYREEPLGEGQPGKPRV*RHGDIK Trigger: TTTGATGTCTCCATGCCTCAAAACACGTGGTTTACC...GGGCTGCCCTTCCCCCAGAGGCTCCTCCCTATATAATCCAGACATTTTGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS TCA 90 bp | GTGGCTGTATTCATAAATACCCGGCATGTGAACTCCTGGGTATCCTaGGGGGTGACATTCTTCAGGTACAGAGAGAAGTTACCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAVFINTRHVNSWVS*GVTFFRYREKLPCF Trigger: GAAGCAGGGTAACTTCTCTCTGTACCTGAAGAATGTCACCCCTCAGGATACCCAGGAGTTCACATGCCGGGTATTTATGAATACAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 90 bp | TTTCCAGTGAAACTTTCTGCCTGGCTAATGCTAGTGATGTTCTGGTaGAGAGCCACATTCTCTACGCAGCACAGAACATCCCCACGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPVKLSAWLMLVMFW*RATFSTQHRTSPRD Trigger: ATCTCGTGGGGATGTTCTGTGCTGCGTAGAGAATGTGGCTCTCCACCAGAACATCACTAGCATTAGCCAGGCAGAAAGTTTCACTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 90 bp | TTATTTCCAGTGAAACTTTCTGCCTGGCTAATGCTAGTGATGTTCTaGTGGAGAGCCACATTCTCTACGCAGCACAGAACATCCCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: LFPVKLSAWLMLVMF*WRATFSTQHRTSPR Trigger: TCGTGGGGATGTTCTGTGCTGCGTAGAGAATGTGGCTCTCCACCAGAACATCACTAGCATTAGCCAGGCAGAAAGTTTCACTGGAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS TCA 90 bp | AGCACAGAACATCCCCACGAGATGTCCAAGGGAGCCTTAATGTGCTaGTTACATCATACAGGCCCAACTTGTTCAAGTAGACAGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: STEHPHEMSKGALMC*LHHTGPTCSSRQCY Trigger: ATAACACTGTCTACTTGAACAAGTTGGGCCTGTATGATGTAATCAGCACATTAAGGCTCCCTTGGACATCTCGTGGGGATGTTCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 90 bp | GCCAGTACAGCAAGGACGGGGACAAGGACTTTTAACTCATTATTGTaGGTTTCCTGTGGGTTCTTTGTGTTATTTCCAGTGAAACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASTARTGTRTFNSLL*VSCGFFVLFPVKLS Trigger: AGAAAGTTTCACTGGAAATAACACAAAGAACCCACAGGAAACCCACAATAATGAGTTAAAAGTCCTTGTCCCCGTCCTTGCTGTACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS-3UTR CAA 90 bp | TCCAGCTCTGTGAGTATGGTTGGGTTCCTGCTCTTTAAAAATGTCTTAACCTGGTTCTGGGTTTTCGATTaGCCAATAGACATACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSVSMVGFLLFKNVLTWFWVFD*PIDIQT Trigger: GGTCTGTATGTCTATTGGCAAATCGAAAACCCAGAA...CCAGGTTAAGACATTTTTAAAGAGCAGGAACCCAACCATACTCACAGAGCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS-3UTR CAA 90 bp | CTCAGATGTCTATGCAATGGGCTGGAATATGCCTTCTTTTCTGCATCTGGCTCGGAGACATCAAATATCTaGGAATCAAATAGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRCLCNGLEYAFFSASGSETSNI*ESNSPG Trigger: ACCAGGACTATTTGATTCCAAGATATTTGATGTCTC...CGAGCCAGATGCAGAAAAGAAGGCATATTCCAGCCCATTGCATAGACATCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS GCA 72 bp | GGGACGCGTGCGTCTGTATATGATGAAGGAAACGAATaGCGCTGCCGCCAGTACAGCAAGGACGGGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTRASVYDEGNE*RCRQYSKDGDK Trigger: CTTGTCCCCGTCCTTGCTGTACTGGCGGCAGCGGCATTCGTTTCCTTCATCATATACAGACGCACGCGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS CAA 72 bp | TGGCGTCTGTGGGGGTCAATGCAGCTGAGCACCACATaGCTGCCCACCATTGCACCGACTTCAGTCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WRLWGSMQLSTT*LPTIAPTSVSA Trigger: TGCAGAGACTGAAGTCGGTGCAATGGTGGGCAGCAATGTGGTGCTCAGCTGCATTGACCCCCACAGACGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS GCA 72 bp | CACATTGCTGCCCACCATTGCACCGACTTCAGTCTCTaGAGAGGCAGCACAGAGGCTGCTCAACAGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HIAAHHCTDFSL*RGSTEAAQQQQ Trigger: TTGCTGCTGTTGAGCAGCCTCTGTGCTGCCTCTGCAGAGACTGAAGTCGGTGCAATGGTGGGCAGCAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | GTCAATGCAGCTGAGCACCACATTGCTGCCCACCATTaGACCGACTTCAGTCTCTGCAGAGGCAGCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VNAAEHHIAAHH*TDFSLCRGSTE Trigger: CTCTGTGCTGCCTCTGCAGAGACTGAAGTCGGTGCAATGGTGGGCAGCAATGTGGTGCTCAGCTGCATTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | AATACAGGTTGGGCTCTGGGTAGCCATTCTTGGACATaGAGGTGTAGGTACGTTCCTGGCCCGGGTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTGWALGSHSWT*RCRYVPGPGWS Trigger: GCTCCAACCCGGGCCAGGAACGTACCTACACCTGCATGTCCAAGAATGGCTACCCAGAGCCCAACCTGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | GGGGTGACATTCTTCAGGTACAGAGAGAAGTTACCCTaGTTCATGGAGTCCAGGGACAGATGGCCCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GVTFFRYREKLP*FMESRDRWPLF Trigger: GAACAGGGGCCATCTGTCCCTGGACTCCATGAAGCAGGGTAACTTCTCTCTGTACCTGAAGAATGTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | CGTGCGTCTGTATATGATGAAGGAAACGAATGCCGCTaGCGCCAGTACAGCAAGGACGGGGACAAGGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: RASVYDEGNECR*RQYSKDGDKDF Trigger: AAAGTCCTTGTCCCCGTCCTTGCTGTACTGGCGGCAGCGGCATTCGTTTCCTTCATCATATACAGACGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | ATCAGAGGTGCTGATGACAGGTGTACTGAAGTTTGCTaGCACACGCAGCCTGACCACCTCTTCCAAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: IRGADDRCTEVC*HTQPDHLFQDL Trigger: AAGATCTTGGAAGAGGTGGTCAGGCTGCGTGTGGCAGCAAACTTCAGTACACCTGTCATCAGCACCTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
||
| CDS GCA 72 bp | AACCCGCTAGAAACATGGAGCTTCTTCCAAACAGGCTaGCTGGTTCCCAAGGACACAAAACAGGGACACTTT | + |
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Preference number: 6 (lower is better) Translates to: NPLETWSFFQTG*LVPKDTKQGHF Trigger: AAAGTGTCCCTGTTTTGTGTCCTTGGGAACCAGGCAGCCTGTTTGGAAGAAGCTCCATGTTTCTAGCGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105393.3 |
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| CDS CCA 72 bp | GCCCCTGTTCTTGTAGGAACTGTCCACATTGATCCCTaGAGACTTGTAAGGCAGGTAGTAAGTCACCGAAAC | + |
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Preference number: 6 (lower is better) Translates to: APVLVGTVHIDP*RLVRQVVSHRN Trigger: GTTTCGGTGACTTACTACCTGCCTTACAAGTCTCCAGGGATCAATGTGGACAGTTCCTACAAGAACAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 72 bp | AAACTTTCTGCCTGGCTAATGCTAGTGATGTTCTGGTaGAGAGCCACATTCTCTACGCAGCACAGAACATCC | + |
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Preference number: 6 (lower is better) Translates to: KLSAWLMLVMFW*RATFSTQHRTS Trigger: GGATGTTCTGTGCTGCGTAGAGAATGTGGCTCTCCACCAGAACATCACTAGCATTAGCCAGGCAGAAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 72 bp | GTGAAACTTTCTGCCTGGCTAATGCTAGTGATGTTCTaGTGGAGAGCCACATTCTCTACGCAGCACAGAACA | + |
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Preference number: 6 (lower is better) Translates to: VKLSAWLMLVMF*WRATFSTQHRT Trigger: TGTTCTGTGCTGCGTAGAGAATGTGGCTCTCCACCAGAACATCACTAGCATTAGCCAGGCAGAAAGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 72 bp | ACCACGTGTTTTGAGGCATGGAGACATCAAATATCTTaGAATCAAATAGTCCTGGTAGGGGACGGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TTCFEAWRHQIS*NQIVLVGDGSP Trigger: TGGGCTCCCGTCCCCTACCAGGACTATTTGATTCCAAGATATTTGATGTCTCCATGCCTCAAAACACGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219038.2 |
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| CDS TCA 72 bp | CATCCCCACGAGATGTCCAAGGGAGCCTTAATGTGCTaGTTACATCATACAGGCCCAACTTGTTCAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HPHEMSKGALMC*LHHTGPTCSSR Trigger: TCTACTTGAACAAGTTGGGCCTGTATGATGTAATCAGCACATTAAGGCTCCCTTGGACATCTCGTGGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CAA 90 bp | GCCGCCAGTACAGCAAGGACGGGGACAAGGACTTTTAACTCATTATaGTGGGTTTCCTGTGGGTTCTTTGTGTTATTTCCAGTGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: AASTARTGTRTFNSL*WVSCGFFVLFPVKL Trigger: AAGTTTCACTGGAAATAACACAAAGAACCCACAGGAAACCCACAATAATGAGTTAAAAGTCCTTGTCCCCGTCCTTGCTGTACTGGCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS TCA 72 bp | TTCATAAATACCCGGCATGTGAACTCCTGGGTATCCTaGGGGGTGACATTCTTCAGGTACAGAGAGAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FINTRHVNSWVS*GVTFFRYREKL Trigger: TAACTTCTCTCTGTACCTGAAGAATGTCACCCCTCAGGATACCCAGGAGTTCACATGCCGGGTATTTATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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| CDS CCA 72 bp | GCAAGGACGGGGACAAGGACTTTTAACTCATTATTGTaGGTTTCCTGTGGGTTCTTTGTGTTATTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ARTGTRTFNSLL*VSCGFFVLFPV Trigger: CACTGGAAATAACACAAAGAACCCACAGGAAACCCACAATAATGAGTTAAAAGTCCTTGTCCCCGTCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105393.3 ENSMUST00000219038.2 |
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