Pregenerated sensors for ICE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032235Ensembl transcript IDs: ENSMUST00000034761.15, ENSMUST00000117246.8, ENSMUST00000117610.8, ENSMUST00000125938.2, ENSMUST00000145538.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACTGTCTGGGAAAGTTACAGCAACTGCCGACGGCTGGGTGTGGTaGCACATTCTACACCCTCAGCACCGCAGACGAGGTACAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KLSGKVTATADGWVW*HILHPQHRRRGTAV Trigger: CACTGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCCAGACAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR CCA 90 bp | AGCAAACTGTCTGGGAAAGTTACAGCAACTGCCGACGGCTGGGTGTaGTGGCACATTCTACACCCTCAGCACCGCAGACGAGGTACAGCA | + |
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Preference number: 1 (lower is better) Translates to: SKLSGKVTATADGWV*WHILHPQHRRRGTA Trigger: TGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCCAGACAGTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR CCA 90 bp | AAAAAGAGCAAACTGTCTGGGAAAGTTACAGCAACTGCCGACGGCTaGGTGTGGTGGCACATTCTACACCCTCAGCACCGCAGACGAGGT | + |
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Preference number: 1 (lower is better) Translates to: KKSKLSGKVTATADG*VWWHILHPQHRRRG Trigger: ACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCCAGACAGTTTGCTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR GCA 90 bp | ACGAGGTACAGCAGTGGTTGTTCAGTTAGCCTTGGTACCAATGACTaGAGACAGCTTGGAATAGGTAAATCGTTGTTTCAAAAACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TRYSSGCSVSLGTND*RQLGIGKSLFQKQN Trigger: ATTTTGTTTTTGAAACAACGATTTACCTATTCCAAGCTGTCTGCAGTCATTGGTACCAAGGCTAACTGAACAACCACTGCTGTACCTCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR GCA 90 bp | ACATCAACAGCAGTTTTAATACTGACAAAAATGGGTCAGAAACAATaGACAGAGCTGTTTCTAACATTGGCAATATTTAACTATTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: TSTAVLILTKMGQKQ*TELFLTLAIFNYWA Trigger: GGCCCAATAGTTAAATATTGCCAATGTTAGAAACAGCTCTGTGCATTGTTTCTGACCCATTTTTGTCAGTATTAAAACTGCTGTTGATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| 3UTR-3UTR TCA 90 bp | GCAACTGCCGACGGCTGGGTGTGGTGGCACATTCTACACCCTCAGCACCGCAGAATTATCTGGTGTTGGTaGAGGTGCCTGCACAACACA | + |
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Preference number: 2 (lower is better) Translates to: ATADGWVWWHILHPQHRRIIWCW*RCLHNT Trigger: TGTGTTGTGCAGGCACCTTCACCAACACCAGATAAT...TCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGGTGGCACATTCTACACCCTCAGCACCGCAGACGAGGTACAGCAGTGGTCTTGGTACCAATGACTaGAGACAGCTTGGAATAGGT | + |
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Preference number: 2 (lower is better) Translates to: GVVAHSTPSAPQTRYSSGLGTND*RQLGIG Trigger: ACCTATTCCAAGCTGTCTGCAGTCATTGGTACCAAG...ACCACTGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATGGAGTGACTAACTCCTaGTGTCACCGCCATTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SCILMVISALGSILPHLHGVTNS*CHRHSC Trigger: GCAGGAATGGCGGTGACAGCAGGAGTTAGTCACTCC...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| 3UTR CCA 72 bp | GGGAAAGTTACAGCAACTGCCGACGGCTGGGTGTGGTaGCACATTCTACACCCTCAGCACCGCAGACGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GKVTATADGWVW*HILHPQHRRRG Trigger: ACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCGACGGCTGGGTGTGGTGGCACATTCTACACCCTCAGCACCGCAGACGAGGAGCAATTATCTGGTGTaGGTGAAGGTGCCTGCACAA | + |
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Preference number: 3 (lower is better) Translates to: CRRLGVVAHSTPSAPQTRSNYLV*VKVPAQ Trigger: TTGTGCAGGCACCTTCACCAACACCAGATAATTGCT...CCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR CCA 72 bp | TCTGGGAAAGTTACAGCAACTGCCGACGGCTGGGTGTaGTGGCACATTCTACACCCTCAGCACCGCAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: SGKVTATADGWV*WHILHPQHRRR Trigger: TCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| 3UTR GCA 72 bp | AGCAGTGGTTGTTCAGTTAGCCTTGGTACCAATGACTaGAGACAGCTTGGAATAGGTAAATCGTTGTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSGCSVSLGTND*RQLGIGKSLFQ Trigger: TTGAAACAACGATTTACCTATTCCAAGCTGTCTGCAGTCATTGGTACCAAGGCTAACTGAACAACCACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGGTGGCACATTCTACACCCTCAGCACCGCAGACGAGGTACAGCAGTGGTCTTTGCTTGAGTTGCTaGACTAACTGCAGGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: GVVAHSTPSAPQTRYSSGLCLSC*TNCRLI Trigger: AATGAGCCTGCAGTTAGTTCAGCAACTCAAGCAAAG...ACCACTGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTGCCACCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR GCA 90 bp | CTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCACCAGGACAGGTGTAGCTGGTaGCACAGGCATAGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LIQFAAMLMEHSTFSVHQDRCSW*HRHSGC Trigger: GCACCCACTATGCCTGTGGCACCAGCTACACCTGTC...CTGGTGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | CATTCTACACCCTCAGCACCGCAGACGAGGTACAGCAGTGGTTGTTCAGTTAGCATCCCAGTTCAGCCTTaGTTCACTCATGGTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: HSTPSAPQTRYSSGCSVSIPVQP*FTHGYA Trigger: AGCATAACCATGAGTGAACCAAGGCTGAACTGGGAT...GCTAACTGAACAACCACTGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR TCA 90 bp | GTGTTGGTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGTCTCTGCTCCCTCTGTaGGAACCGAGAGAAACGAGG | + |
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Preference number: 4 (lower is better) Translates to: VLVKVPAQHNKINRRVKVSLLPL*EPRETR Trigger: CCTCGTTTCTCTCGGTTCTCACAGAGGGAGCAGAGA...CACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCACCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR TCA 90 bp | CACATTCTACACCCTCAGCACCGCAGACGAGGTACAGCAGTGGTTGTTCAGTTATTCTACAGAACTTGCTaGGACACTCAAATTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HILHPQHRRRGTAVVVQLFYRTC*DTQIFS Trigger: GGAGAAAATTTGAGTGTCTCAGCAAGTTCTGTAGAA...TAACTGAACAACCACTGCTGTACCTCGTCTGCGGTGCTGAGGGTGTAGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCATGCCAGAGGCACAGCTaGTATTTTGGGGACTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: FSYSVCCHANGAFYILRACQRHS*YFGDCV Trigger: CACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCA...TGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | CTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCACCAGCTTTGCTTGAGTTGCTaGACTAACTGCAGGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: LIQFAAMLMEHSTFSVHQLCLSC*TNCRLI Trigger: AATGAGCCTGCAGTTAGTTCAGCAACTCAAGCAAAG...CTGGTGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | AACCCACTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAATCTCTGCTCCCTCTGTaGGAACCGAGAGAAACGAGG | + |
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Preference number: 4 (lower is better) Translates to: NPLLMLLSELTTIHEKKESLLPL*EPRETR Trigger: CCTCGTTTCTCTCGGTTCTCACAGAGGGAGCAGAGA...TTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAGTGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | CAGTTCCTAAATCAGCAAGTGGTTTTCCTACCTATGATCTTTAGAAAAGAATGCACAGTGGTAGTGGCCTaGTTCCCTGCAGAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFLNQQVVFLPMIFRKECTVVVA*FPAEAC Trigger: ACAGGCTTCTGCAGGGAATCAGGCCACTACCACTGT...GCATTCTTTTCTAAAGATCATAGGTAGGAAAACCACTTGCTGATTTAGGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | AACCCACTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAACTGCGGGTGGTATCTTaGAACAAGCTTCTCTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: NPLLMLLSELTTIHEKKELRVVS*NKLLCV Trigger: AACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAG...TTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAGTGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATTGCAGAAGCCTGTGCTaGAGAATTTGGCCTAGAACC | + |
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Preference number: 4 (lower is better) Translates to: SCILMVISALGSILPHLHCRSLC*RIWPRT Trigger: GGTTCTAGGCCAAATTCTTCAGCACAGGCTTCTGCA...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | CTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCACCAGCTGTTTAGATTCTTCTaGATTAGTCAAGGGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: LIQFAAMLMEHSTFSVHQLFRFF*ISQGQL Trigger: GAGTTGCCCTTGACTAATTCAGAAGAATCTAAACAG...CTGGTGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTCTCAGGTGTAGCTGGTaGCATGGGCATAGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFLRCSW*HGHSGC Trigger: ACACCCACTATGCCCATGGCACCAGCTACACCTGAG...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTAAAGCAGCAGAGGGTTaGTCAGAAGCAGGCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFKAAEG*SEAGGC Trigger: ACAGCCGCCTGCTTCTGAGCAACCCTCTGCTGCTTT...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | TCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACCAACCTTTGCTTGTaGTGCAGGGCGCAGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SEMKIFLVFTFGVHKGISTNLCL*CRAQWF Trigger: AAACCACTGCGCCCTGCAGCACAAGCAAAGGTTGGT...TGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | TTTTCTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCAGAACAGGCAGGCAACTaGTTTTGGTTTCCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FSYSVCCHANGAFYILRAEQAGN*FWFPWR Trigger: TCTCCATGGAAACCAAAAGCAGTTGCCTGCCTGTTC...TGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | TTCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCCTCGTTTCTACCCTCTaGATGCTGCACCGCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: FRDEDFSCFHFRRPQRNFLVSTL*MLHRTS Trigger: ACTTGTGCGGTGCAGCATCCAGAGGGTAGAAACGAG...GAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | CTTATTCAGTTTGCTGCCATGCTAATGGAGCATTCTACATTCTCCGTGCACCAGTTACAAACTTTGCACTaGCCAAAACAAGAAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LIQFAAMLMEHSTFSVHQLQTLH*PKQEES Trigger: AGACTCTTCTTGTTTTGGGCAGTGCAAAGTTTGTAA...CTGGTGCACGGAGAATGTAGAATGCTCCATTAGCATGGCAGCAAACTGAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | AACCCACTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAATCCCAGTTCAGCCTTaGTTCACTCATGGTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: NPLLMLLSELTTIHEKKEIPVQP*FTHGYA Trigger: AGCATAACCATGAGTGAACCAAGGCTGAACTGGGAT...TTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAGTGGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | AAAAGAGAAAGCAATTATCTGGTGTTGGTGAAGGTGCCTGCACAACACAATAAAATCCCAGTTCAGCCTTaGTTCACTCATGGTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: KRESNYLVLVKVPAQHNKIPVQP*FTHGYA Trigger: AGCATAACCATGAGTGAACCAAGGCTGAACTGGGAT...TTTATTGTGTTGTGCAGGCACCTTCACCAACACCAGATAATTGCTTTCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS-3UTR CCA 90 bp | GTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGCCAACAAGGATAAGGAACTCGTaGTTTTGGAAGGAGAATCAT | + |
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Preference number: 4 (lower is better) Translates to: VKVPAQHNKINRRVKVPTRIRNS*FWKENH Trigger: ATGATTCTCCTTCCAAAACCACGAGTTCCTTATCCT...TGTTGGCACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATGTTGTGGGGTCTCAATaGAAGACATGTCCTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCILMVISALGSILPHLHVVGSQ*KTCPLL Trigger: CAAAAGAGGACATGTCTTCCATTGAGACCCCACAAC...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | AACCCACTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAACATCTCAACACACACTaGAATTTCCCACTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: NPLLMLLSELTTIHEKKEHLNTH*NFPLLL Trigger: AAGGAGCAGTGGGAAATTCCAGTGTGTGTTGAGATG...TTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAGTGGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTGCGCAGTGGTTTAGGTaGAAAAGTGCAAGGTACTCG | + |
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Preference number: 4 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFAQWFR*KSARYS Trigger: CGAGTACCTTGCACTTTTCCACCTAAACCACTGCGC...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | CAGTTCCTAAATCAGCAAGTGGTTTTCCTACCTATGATCTTTAGAAAAGAATGCGAGACAGGATTCCTGTaGTTACGGGTAGGCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: QFLNQQVVFLPMIFRKECETGFL*LRVGIL Trigger: AAGAATGCCTACCCGTAACCACAGGAATCCTGTCTC...GCATTCTTTTCTAAAGATCATAGGTAGGAAAACCACTTGCTGATTTAGGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | GTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGCCAACAACTGCAGATATTCATTaGTATTTGTTCCGACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VKVPAQHNKINRRVKVPTTADIH*YLFRQS Trigger: AGACTGTCGGAACAAATACCAATGAATATCTGCAGT...TGTTGGCACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS-3UTR CCA 90 bp | GTGTTGGTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGACTGCAGATATTCATTaGTATTTGTTCCGACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLVKVPAQHNKINRRVKVTADIH*YLFRQS Trigger: AGACTGTCGGAACAAATACCAATGAATATCTGCAGT...CACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCACCAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAAGAGCTATCTGCGGGTaGTATCTTGAAACAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SEMKIFLVFTFGVHKGISRAICG*YLETSF Trigger: GAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCT...TGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACAATTTTGCATTGGCACTaGGGACCTCTTCACCACATG | + |
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Preference number: 4 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTILHWH*GPLHHM Trigger: CATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAAT...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATACTTTTTCCTTTGCTTaGGTTGCTGAACTAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SCILMVISALGSILPHLHTFSFA*VAELTA Trigger: TGCAGTTAGTTCAGCAACTCAAGCAAAGGAAAAAGT...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACAACTTTCAGCTGCTTCTaGTGCAGTAGCTGTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTTFSCF*CSSCVV Trigger: AACAACACAGCTACTGCATCAGAAGCAGCTGAAAGT...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR GCA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTCCTCATCTGTATCACTaGCACAAGGAATCCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFPHLYH*HKESLS Trigger: AGAAAGGGATTCCTTGTGGCAGTGATACAGATGAGG...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR CCA 90 bp | TCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAAAGGTGAATAATGCTTaGCTAGTCAGAGCTATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SEMKIFLVFTFGVHKGISKVNNA*LVRAIC Trigger: GCAGATAGCTCTGACTAGCCAAGCATTATTCACCTT...TGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS-3UTR TCA 90 bp | CTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAACAATCTTCTACAGAACTTGCTaGGACACTCAAATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLMLLSELTTIHEKKETIFYRTC*DTQIFS Trigger: GGAGAAAATTTGAGTGTCTCAGCAAGTTCTGTAGAA...GATTGTTTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR TCA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACAAGTAACTTTTCCATCTaGGGTCTTGTAGATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTSNFSI*GLVDQE Trigger: CTCCTGATCTACAAGACCTCAGATGGAAAAGTTACT...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR GCA 90 bp | AACCCACTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAATTTTCACTTGTTCAATaGAAGCTCTTAGGAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLMLLSELTTIHEKKEFSLVQ*KLLGVA Trigger: AGCAACTCCTAAGAGCTTGCATTGAACAAGTGAAAA...TTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAGTGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR GCA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACATTTAGGCTTCTGAAATaGAGAGGGCCAACTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTFRLLK*RGPTGF Trigger: AAATCCAGTTGGCCCTCTGCATTTCAGAAGCCTAAA...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CCA 90 bp | CTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAACAATCAGGATAAGGAACTCGTaGTTTTGGAAGGAGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLMLLSELTTIHEKKETIRIRNS*FWKENH Trigger: ATGATTCTCCTTCCAAAACCACGAGTTCCTTATCCT...GATTGTTTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CCA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATACTCAGGTACTTTCCTaGAAACTGGTTTTAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCILMVISALGSILPHLHTQVLS*KLVLKA Trigger: AGCTTTTAAAACCAGTTTCCAGGAAAGTACCTGAGT...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAGGAGCTATATATTCTaGTGTATCTTCCACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDEDFSCFHFRRPQRNFRSYIF*CIFHIV Trigger: GACTATGTGGAAGATACATCAGAATATATAGCTCCT...GAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR GCA 90 bp | CTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAACAATCAGGAAGGTCACAATGTaGCTTATGCAAATTATATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLMLLSELTTIHEKKETIRKVTM*LMQIIC Trigger: GCATATAATTTGCATAAGGCACATTGTGACCTTCCT...GATTGTTTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCACTGCAGATATTCATTaGTATTTGTTCCGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRDEDFSCFHFRRPQRNFTADIH*YLFRQS Trigger: AGACTGTCGGAACAAATACCAATGAATATCTGCAGT...GAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCATTCCCTCAGTTCTGTaGACTTCATTATCTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRDEDFSCFHFRRPQRNFIPSVL*TSLSCV Trigger: AACACAAGATAATGAAGTCCACAGAACTGAGGGAAT...GAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTCCTAAATCAGCAAGTGGTTTTCCTACCTATGATCTTTAGAAAAGAATGCTGTTTTTACAAACTTTaGACTGCCCAAAACAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLNQQVVFLPMIFRKECCFYKL*TAQNKK Trigger: CTTCTTGTTTTGGGCAGTGCAAAGTTTGTAAAAACA...GCATTCTTTTCTAAAGATCATAGGTAGGAAAACCACTTGCTGATTTAGGAACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR GCA 90 bp | CTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAACAATCTCACAATGTGCCTTATaGAAATTATATGCCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLMLLSELTTIHEKKETISQCAL*KLYAVL Trigger: TAGAACGGCATATAATTTGCATAAGGCACATTGTGA...GATTGTTTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CCA 90 bp | AGGTGTAGCTGGTGCCACAGGCATAGTGGGTGCCACAGGCGTAGCTaGTGCCAGAGGCACAGCTGCTATTTTGGGGACTGCGTGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: RCSWCHRHSGCHRRS*CQRHSCYFGDCVDI Trigger: GATGTCCACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 90 bp | TGTAGCTGGTGCCACAGGCATAGTGGGTGCCACAGGCGTAGCTGGTaGCAGAGGCACAGCTGCTATTTTGGGGACTGCGTGGACATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSWCHRHSGCHRRSW*QRHSCYFGDCVDIC Trigger: ACAGATGTCCACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 90 bp | CATAGTGGGTGTGACAGGTGTAGCTGGTGCCACAGGCATAGTGGGTaGCACAGGCGTAGCTGGTGCCAGAGGCACAGCTGCTATTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSGCDRCSWCHRHSG*HRRSWCQRHSCYFG Trigger: CCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACACCTGTCACACCCACTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATAGGGCCAACTGGATTTaGGCCAGGGAGCGGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCILMVISALGSILPHLHRANWI*ARERHP Trigger: TGGATGCCGCTCCCTGGCCAAAATCCAGTTGGCCCT...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | CTGCTGATGCTGCTTTCTGAATTAACCACAATACATGAGAAGAAAGAAACAATCCAAAGCAGCAGAGGGTaGCTCAGAAGCAGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLMLLSELTTIHEKKETIQSSRG*LRSRRL Trigger: CAGCCGCCTGCTTCTGAGCAACCCTCTGCTGCTTTG...GATTGTTTCTTTCTTCTCATGTATTGTGGTTAATTCAGAAAGCAGCATCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 90 bp | TGGTTATTGAGCAAGGTGAATAATGCTTGGCTAGTCAGAGCTATCTaGGGGTGGTATCTTGAAACAAGCTTCTCTGCGTTCGGGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: WLLSKVNNAWLVRAI*GWYLETSFSAFGSL Trigger: TAAAGACCCGAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGCATTATTCACCTTGCTCAATAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS TCA 90 bp | TGCATATTTAGCCAACAAATCCACATAAGTTCTCTGCTCCCTCTGTaGGAACCGAGAGAAACGAGGATAAGGAACTCGTGGTTTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CIFSQQIHISSLLPL*EPRETRIRNSWFWK Trigger: CTTCCAAAACCACGAGTTCCTTATCCTCGTTTCTCTCGGTTCTCACAGAGGGAGCAGAGAACTTATGTGGATTTGTTGGCTAAATATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034761.15 ENSMUST00000117246.8 ENSMUST00000125938.2 ENSMUST00000145538.2 |
||
| CDS CCA 90 bp | TTGAGCAAGGTGAATAATGCTTGGCTAGTCAGAGCTATCTGCGGGTaGTATCTTGAAACAAGCTTCTCTGCGTTCGGGTCTTTACTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LSKVNNAWLVRAICG*YLETSFSAFGSLLI Trigger: TATTAGTAAAGACCCGAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGCATTATTCACCTTGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CCA 90 bp | CCTCAGTTCTGTGGACTTCATTATCTTGTGTTAGAGATTTTGCATTaGCACTGGGGACCTCTTCACCACATGGTTCAAGTCCTTGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQFCGLHYLVLEILH*HWGPLHHMVQVLDH Trigger: ATGATCAAGGACTTGAACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAGTCCACAGAACTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | GTGTTGGTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGCGACAGTCTTGGAACTaGAGGGGAGCTTTGCATATT | + |
|
Preference number: 5 (lower is better) Translates to: VLVKVPAQHNKINRRVKVRQSWN*RGALHI Trigger: AATATGCAAAGCTCCCCTCAAGTTCCAAGACTGTCG...CACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCACCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
||
| CDS CCA 90 bp | CACAGCACACCTACATCACTTTCCTTAGAAATTCCCTCAGTTCTGTaGACTTCATTATCTTGTGTTAGAGATTTTGCATTGGCACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSTPTSLSLEIPSVL*TSLSCVRDFALALG Trigger: CCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAGTCCACAGAACTGAGGGAATTTCTAAGGAAAGTGATGTAGGTGTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | GTGTTGGTGAAGGTGCCTGCACAACACAATAAAATCAACAGAAGGGTTAAAGTGAAGGAACTCGTGGTTTaGGAAGGAGAATCATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLVKVPAQHNKINRRVKVKELVV*EGESSQ Trigger: TTGGGATGATTCTCCTTCCAAAACCACGAGTTCCTT...CACTTTAACCCTTCTGTTGATTTTATTGTGTTGTGCAGGCACCTTCACCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117246.8 |
||
| CDS GCA 90 bp | CTTGAAACAAGCTTCTCTGCGTTCGGGTCTTTACTAATATCACAGTaGATAACTTCAGCTTTTTGTTGTGGGGTCTCAATGGAAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: LETSFSAFGSLLISQ*ITSAFCCGVSMEDM Trigger: CATGTCTTCCATTGAGACCCCACAACAAAAAGCTGAAGTTATGCACTGTGATATTAGTAAAGACCCGAACGCAGAGAAGCTTGTTTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCTAAATCAGCAAGTGGTTTTCCTACCTATGATCTTTAGAAAAGAATGCTCTGCGGGTGGTATCTaGAAACAAGCTTCTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QFLNQQVVFLPMIFRKECSAGGI*KQASLR Trigger: ACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGA...GCATTCTTTTCTAAAGATCATAGGTAGGAAAACCACTTGCTGATTTAGGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | TCCTGCATCCTCATGGTTATTTCTGCTTTGGGTAGTATCTTACCACATTTACATCTTGTGTTAGAGATTTaGCATTGGCACTGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SCILMVISALGSILPHLHLVLEI*HWHWGP Trigger: AGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAG...ATGTAAATGTGGTAAGATACTACCCAAAGCAGAAATAACCATGAGGATGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACATGTTGTTGGGATTGTTaGCATTCCCCTGACCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTCCWDC*HSPDHP Trigger: AGGGTGGTCAGGGGAATGCAAACAATCCCAACAACA...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTCGACAGTCTTGGAACTaGAGGGGAGCTTTGCATATT | + |
|
Preference number: 5 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFRQSWN*RGALHI Trigger: AATATGCAAAGCTCCCCTCAAGTTCCAAGACTGTCG...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | TCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAATCTTCTTCCGTTTTTaGGAGCGTGGTCTCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEMKIFLVFTFGVHKGISIFFRF*ERGLVS Trigger: AGAAACGAGACCACGCTCCAAAAAACGGAAGAAGAT...TGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | ATTTACATGGAATTTGTGCAAAGTAGTAGAGATATTGTCACCAAAGCTGTCACAAAGGAACTCGTGGTTTaGGAAGGAGAATCATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IYMEFVQSSRDIVTKAVTKELVV*EGESSQ Trigger: TTGGGATGATTCTCCTTCCAAAACCACGAGTTCCTT...TGTGACAGCTTTGGTGACAATATCTCTACTACTTTGCACAAATTCCATGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCCATAACTTCAGCTTTTaGTTGTGGGGTCTCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FRDEDFSCFHFRRPQRNFHNFSF*LWGLNG Trigger: TCCATTGAGACCCCACAACAAAAAGCTGAAGTTATG...GAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | CAGTTCCTAAATCAGCAAGTGGTTTTCCTACCTATGATCTTTAGAAAAGAATGCATTACTTTAACTGGTTaGGAACCTTCCACAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: QFLNQQVVFLPMIFRKECITLTG*EPSTAI Trigger: GATAGCTGTGGAAGGTTCCAAACCAGTTAAAGTAAT...GCATTCTTTTCTAAAGATCATAGGTAGGAAAACCACTTGCTGATTTAGGAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | TCAGAGATGAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAGTAATTTCACAGGCATaGAGGGAAATGCTGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SEMKIFLVFTFGVHKGISVISQA*REMLFL Trigger: TAAAAACAGCATTTCCCTCAATGCCTGTGAAATTAC...TGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTCATCTCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS-3UTR CAA 90 bp | GAAGATTTTTCTTGTTTTCACTTTCGGCGTCCACAAAGGAATTTCAACAAGTTTAAGACATGTCCTCTTTaGAGAGCTGTAATTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EDFSCFHFRRPQRNFNKFKTCPL*RAVISQ Trigger: CTGTGAAATTACAGCTCTCAAAAGAGGACATGTCTT...AAACTTGTTGAAATTCCTTTGTGGACGCCGAAAGTGAAAACAAGAAAAATCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | TGTGACAGGTGTAGCTGGTGCCACAGGCATAGTGGGTaGCACAGGCGTAGCTGGTGCCAGAGGCACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CDRCSWCHRHSG*HRRSWCQRHSC Trigger: GCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACACCTGTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | TGCCACAGGCATAGTGGGTGCCACAGGCGTAGCTGGTaGCAGAGGCACAGCTGCTATTTTGGGGACTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CHRHSGCHRRSW*QRHSCYFGDCV Trigger: CACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | TGCCATGGGCATAGTGGGTGTGACAGGTGTAGCTGGTaGCACAGGCATAGTGGGTGCCACAGGCGTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHGHSGCDRCSW*HRHSGCHRRSW Trigger: CCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACACCTGTCACACCCACTATGCCCATGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CCA 72 bp | TGGTGCCACAGGCATAGTGGGTGCCACAGGCGTAGCTaGTGCCAGAGGCACAGCTGCTATTTTGGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: WCHRHSGCHRRS*CQRHSCYFGDC Trigger: GCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | GGGTGCCACAGGCGTAGCTGGTGCCAGAGGCACAGCTaGTATTTTGGGGACTGCGTGGACATCTGTCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCHRRSWCQRHS*YFGDCVDICHE Trigger: CTCATGACAGATGTCCACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CAA 72 bp | ACAGGCGTAGCTGGTGCCAGAGGCACAGCTGCTATTTaGGGGACTGCGTGGACATCTGTCATGAGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGVAGARGTAAI*GTAWTSVMRGA Trigger: TGCACCCCTCATGACAGATGTCCACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | TTTGGCCAGGGAGCGGCATCCAAAGCAGCAGAGGGTTaGTCAGAAGCAGGCGGCTGTTTAGATTCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FGQGAASKAAEG*SEAGGCLDSSE Trigger: TTCAGAAGAATCTAAACAGCCGCCTGCTTCTGAGCAACCCTCTGCTGCTTTGGATGCCGCTCCCTGGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CCA 72 bp | CCAGAGTTTCAATTTTTCGGCACTCACCAGCTTCAGTaGGCATGTCCACCTCAGAGGTGTACTCTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PEFQFFGTHQLQ*ACPPQRCTLQV Trigger: AACCTGAAGAGTACACCTCTGAGGTGGACATGCCCACTGAAGCTGGTGAGTGCCGAAAAATTGAAACTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS TCA 72 bp | AGCCAACAAATCCACATAAGTTCTCTGCTCCCTCTGTaGGAACCGAGAGAAACGAGGATAAGGAACTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQQIHISSLLPL*EPRETRIRNSW Trigger: CCACGAGTTCCTTATCCTCGTTTCTCTCGGTTCTCACAGAGGGAGCAGAGAACTTATGTGGATTTGTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034761.15 ENSMUST00000117246.8 ENSMUST00000125938.2 ENSMUST00000145538.2 |
||
| CDS TCA 72 bp | TGCTTGGCTAGTCAGAGCTATCTGCGGGTGGTATCTTaGAACAAGCTTCTCTGCGTTCGGGTCTTTACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLASQSYLRVVS*NKLLCVRVFTN Trigger: ATTAGTAAAGACCCGAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS GCA 72 bp | AGCAAGGTGAATAATGCTTGGCTAGTCAGAGCTATCTaGGGGTGGTATCTTGAAACAAGCTTCTCTGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKVNNAWLVRAI*GWYLETSFSAF Trigger: GAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGCATTATTCACCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
||
| CDS CCA 72 bp | CTTGGTCCATGGTTATTGAGCAAGGTGAATAATGCTTaGCTAGTCAGAGCTATCTGCGGGTGGTATCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGPWLLSKVNNA*LVRAICGWYLE Trigger: TTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGCATTATTCACCTTGCTCAATAACCATGGACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CCA 72 bp | GAACCGAGAGAAACGAGGATAAGGAACTCGTGGTTTTaGAAGGAGAATCATCCCAACTTTTTCCTTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: EPRETRIRNSWF*KENHPNFFLCL Trigger: CAAGCAAAGGAAAAAGTTGGGATGATTCTCCTTCCAAAACCACGAGTTCCTTATCCTCGTTTCTCTCGGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034761.15 ENSMUST00000117246.8 ENSMUST00000125938.2 |
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| CDS CCA 72 bp | TGTGGACTTCATTATCTTGTGTTAGAGATTTTGCATTaGCACTGGGGACCTCTTCACCACATGGTTCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: CGLHYLVLEILH*HWGPLHHMVQV Trigger: GACTTGAACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAGTCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CAA 72 bp | CAGTTCTGTGGACTTCATTATCTTGTGTTAGAGATTTaGCATTGGCACTGGGGACCTCTTCACCACATGGTT | + |
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Preference number: 6 (lower is better) Translates to: QFCGLHYLVLEI*HWHWGPLHHMV Trigger: AACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAGTCCACAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS GCA 72 bp | AGCTTCTCTGCGTTCGGGTCTTTACTAATATCACAGTaGATAACTTCAGCTTTTTGTTGTGGGGTCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFSAFGSLLISQ*ITSAFCCGVSM Trigger: CATTGAGACCCCACAACAAAAAGCTGAAGTTATGCACTGTGATATTAGTAAAGACCCGAACGCAGAGAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CCA 72 bp | CTTCATTATCTTGTGTTAGAGATTTTGCATTGGCACTaGGGACCTCTTCACCACATGGTTCAAGTCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LHYLVLEILHWH*GPLHHMVQVLD Trigger: ATCAAGGACTTGAACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CAA 72 bp | ACACACATACCAGATACTGCAGATATTCATTGGTATTaGTTCCGACAGTCTTGGAACTTGAGGGGAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: THIPDTADIHWY*FRQSWNLRGAL Trigger: CAAAGCTCCCCTCAAGTTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTATCTGGTATGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS TCA 72 bp | GAGAATCATCCCAACTTTTTCCTTTGCTTGAGTTGCTaGACTAACTGCAGGCTCATTTTCTACAGAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: ENHPNFFLCLSC*TNCRLIFYRTC Trigger: GCAAGTTCTGTAGAAAATGAGCCTGCAGTTAGTTCAGCAACTCAAGCAAAGGAAAAAGTTGGGATGATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034761.15 ENSMUST00000117246.8 ENSMUST00000125938.2 |
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| CDS CCA 72 bp | CAGAATACACACATACCAGATACTGCAGATATTCATTaGTATTTGTTCCGACAGTCTTGGAACTTGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: QNTHIPDTADIH*YLFRQSWNLRG Trigger: TCCCCTCAAGTTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTATCTGGTATGTGTGTATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS CAA 72 bp | TACTGCAGATATTCATTGGTATTTGTTCCGACAGTCTaGGAACTTGAGGGGAGCTTTGCATATTTAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: YCRYSLVFVPTV*ELEGSFAYLAN Trigger: GTTGGCTAAATATGCAAAGCTCCCCTCAAGTTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034761.15 ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS CAA 72 bp | ACAGAATACACACATACCAGATACTGCAGATATTCATaGGTATTTGTTCCGACAGTCTTGGAACTTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TEYTHTRYCRYS*VFVPTVLELEG Trigger: CCCCTCAAGTTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTATCTGGTATGTGTGTATTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117246.8 ENSMUST00000117610.8 |
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| CDS CAA 72 bp | ACATGTCCTCTTTTGAGAGCTGTAATTTCACAGGCATaGAGGGAAATGCTGTTTTTACAAACTTTGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: TCPLLRAVISQA*REMLFLQTLHC Trigger: GCAGTGCAAAGTTTGTAAAAACAGCATTTCCCTCAATGCCTGTGAAATTACAGCTCTCAAAAGAGGACATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CAA 72 bp | GTCTTTACTAATATCACAGTGCATAACTTCAGCTTTTaGTTGTGGGGTCTCAATGGAAGACATGTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VFTNITVHNFSF*LWGLNGRHVLF Trigger: AAAGAGGACATGTCTTCCATTGAGACCCCACAACAAAAAGCTGAAGTTATGCACTGTGATATTAGTAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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| CDS CCA 72 bp | CCTACATCACTTTCCTTAGAAATTCCCTCAGTTCTGTaGACTTCATTATCTTGTGTTAGAGATTTTGCATTG | + |
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Preference number: 6 (lower is better) Translates to: PTSLSLEIPSVL*TSLSCVRDFAL Trigger: CAATGCAAAATCTCTAACACAAGATAATGAAGTCCACAGAACTGAGGGAATTTCTAAGGAAAGTGATGTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034761.15 |
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