Pregenerated sensors for ICAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037405Ensembl transcript IDs: ENSMUST00000086399.6
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCCCCTCAGCAGGGGCAATAGAGAATGAAGTCAGCGTTTCTTaGCTGAAGGTCCACCGGGCTGTAGGTGGGTCCGGGTCACACGTG | + |
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Preference number: 1 (lower is better) Translates to: RSPSAGAIENEVSVS*LKVHRAVGGSGSHV Trigger: CACGTGTGACCCGGACCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGCTGAGGGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR TCA 90 bp | CATGTCTTCCTTAGGCAGGAGCCCCTCAGCAGGGGCAATAGAGAATaGAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: HVFLRQEPLSRGNRE*SQRFLAEGPPGCRW Trigger: CCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGCTGAGGGGCTCCTGCCTAAGGAAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR GCA 90 bp | TCTTGCTCCATCCACCGAGTCCTCTTAGCTCTGAGGCTACAAGTGTaGATCCCCCAGGCCACCATCCTGTTCTGTGACAGCCAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCSIHRVLLALRLQV*IPQATILFCDSQRK Trigger: CTTCCTCTGGCTGTCACAGAACAGGATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAGAGCTAAGAGGACTCGGTGGATGGAGCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR TCA 90 bp | TCTGAGGCTACAAGTGTGCATCCCCCAGGCCACCATCCTGTTCTGTaGCAGCCAGAGGAAGTGGCTGAGGGTAAATGCTGTCTACCATTC | + |
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Preference number: 1 (lower is better) Translates to: SEATSVHPPGHHPVL*QPEEVAEGKCCLPF Trigger: GAATGGTAGACAGCATTTACCCTCAGCCACTTCCTCTGGCTGTCACAGAACAGGATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CCA 90 bp | TGCATCCCCCAGGCCACCATCCTGTTCTGTGACAGCCAGAGGAAGTaGCTGAGGGTAAATGCTGTCTACCATTCTGTTCAAAAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CIPQATILFCDSQRK*LRVNAVYHSVQKQQ Trigger: CTGCTGCTTTTGAACAGAATGGTAGACAGCATTTACCCTCAGCCACTTCCTCTGGCTGTCACAGAACAGGATGGTGGCCTGGGGGATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CAA 90 bp | GGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTAAGGAGTaGGAACATTTCCTTCCAGGCTTTCTCTTTGAGGTGGAGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: GCLPSHSSLHDPSKE*EHFLPGFLFEVEPP Trigger: AGGCGGCTCCACCTCAAAGAGAAAGCCTGGAAGGAAATGTTCCAACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAAAACAGCAGCTGTTGCCCTaGAGGGGGTCCAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: EEQRTTASPHSVYVTGEKQQLLP*RGSRQE Trigger: CTCCTGCCTGGACCCCCTGCAGGGCAACAGCTGCTG...TTTTTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGGCAATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGACAGCCAGAGGAAGTaGCTGAGGGTAAATGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: AGAIENEVSVSWLKVHRADSQRK*LRVNAV Trigger: GACAGCATTTACCCTCAGCCACTTCCTCTGGCTGTC...AGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CAA 90 bp | GAAAGGTTTCTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTaGCACGACCCTTCTAAGGAGTTGGAACATTTCCTTCCAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ERFLCWEGCLPSHSS*HDPSKELEHFLPGF Trigger: AAAGCCTGGAAGGAAATGTTCCAACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAGAAACCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR GCA 90 bp | GATTTCATGAGCATGAGGCTCGATTGTTCAGCTGCTAAGGCATGGTGGCTGACAGACTCTCACAGCATCTaGAGCAGGGTCCAGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: DFMSMRLDCSAAKAWWLTDSHSI*SRVQAI Trigger: TATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTC...TGTCAGCCACCATGCCTTAGCAGCTGAACAATCGAGCCTCATGCTCATGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAAAACTGAGGCTACAAGTGTaGATCCCCCAGGCCACCATC | + |
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Preference number: 2 (lower is better) Translates to: EEQRTTASPHSVYVTGEKLRLQV*IPQATI Trigger: GATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAG...TTTTTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR CAA 90 bp | CCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCATAAAGCAGCAGCAGCTGTaGCCCTGCAGGGGGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PCDLSPDSHSICSRVQAIKQQQL*PCRGSR Trigger: CCTGGACCCCCTGCAGGGCAACAGCTGCTGCTGCTT...TATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR TCA 72 bp | CTTAGGCAGGAGCCCCTCAGCAGGGGCAATAGAGAATaGAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGC | + |
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Preference number: 3 (lower is better) Translates to: LRQEPLSRGNRE*SQRFLAEGPPG Trigger: GCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGCTGAGGGGCTCCTGCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CCA 72 bp | TCAGCAGGGGCAATAGAGAATGAAGTCAGCGTTTCTTaGCTGAAGGTCCACCGGGCTGTAGGTGGGTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: SAGAIENEVSVS*LKVHRAVGGSG Trigger: CCCGGACCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR GCA 72 bp | CTGTCTACCATTCTGTTCAAAAGCAGCAGCAGCTGTTaGCCTGCAGGGGGTCCAGGCAGGAGTCTCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSTILFKSSSSC*PAGGPGRSLIQ Trigger: CTGGATGAGACTCCTGCCTGGACCCCCTGCAGGGCAACAGCTGCTGCTGCTTTTGAACAGAATGGTAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR GCA 72 bp | TGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTaGACGACCCTTCTAAGGAGTTGGAACATTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: CAGRGAYPPTAA*TTLLRSWNISF Trigger: GAAGGAAATGTTCCAACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR TCA 72 bp | CAGGCTTTCTCTTTGAGGTGGAGCCGCCTGGGACCATaGTTTCATGAGCATGAGGCTCGATTGTTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QAFSLRWSRLGP*FHEHEARLFSC Trigger: GCAGCTGAACAATCGAGCCTCATGCTCATGAAATCATGGTCCCAGGCGGCTCCACCTCAAAGAGAAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR GCA 72 bp | GACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTaGAGCAGGGTCCAGGCCATAACTTATACATTCACC | + |
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Preference number: 3 (lower is better) Translates to: DPCDLSPDSHSI*SRVQAITYTFT Trigger: GGTGAATGTATAAGTTATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CCA 72 bp | ATGAGCATGAGGCTCGATTGTTCAGCTGCTAAGGCATaGTGGCTGACATTGGGAACAAAAGTAGGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: MSMRLDCSAAKA*WLTLGTKVGGE Trigger: CTCCCCACCTACTTTTGTTCCCAATGTCAGCCACCATGCCTTAGCAGCTGAACAATCGAGCCTCATGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAAAAATACATCAAGAAGAGTaGGGGACAATGTCTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: EEQRTTASPHSVYVTGEKIHQEE*GTMSQL Trigger: AAGCTGAGACATTGTCCCCAACTCTTCTTGATGTAT...TTTTTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | CCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCATAGGGGTGCCCACCCACTaGCTGGCGGCTCAGTATCTC | + |
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Preference number: 4 (lower is better) Translates to: PCDLSPDSHSICSRVQAIGVPTH*LAAQYL Trigger: GAGATACTGAGCCGCCAGCCAGTGGGTGGGCACCCC...TATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | CAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGTCCGGGTCACACGTTGCGTCTCCAGGATCTaGTCCGCTAGCTCCAAAACG | + |
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Preference number: 4 (lower is better) Translates to: QRFLAEGPPGCRWVRVTRCVSRI*SASSKT Trigger: CGTTTTGGAGCTAGCGGACCAGATCCTGGAGACGCA...ACGTGTGACCCGGACCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR TCA 90 bp | ACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCAGGATGGATGGATACCTaGGCATCACCAGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: THVIFPQTLTASAAGSRPGWMDT*ASPGPG Trigger: CCCTGGGCCTGGTGATGCTCAGGTATCCATCCATCC...TGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | CAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGTCCGGGTCACACGTCTGACACAGAGTCACTaGTGTTTGTGCTCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QRFLAEGPPGCRWVRVTRLTQSH*CLCSPG Trigger: CCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAG...ACGTGTGACCCGGACCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | CCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCATATGCACGGACCCACCCTaGGGCAGGAAGGCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PCDLSPDSHSICSRVQAICTDPP*GRKASL Trigger: CAGAGAAGCCTTCCTGCCCCAGGGTGGGTCCGTGCA...TATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCAATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTTGCCCACCCACTGGCTaGCGGCTCAGTATCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGAIENEVSVSWLKVHRACPPTG*RLSISS Trigger: GGAGGAGATACTGAGCCGCCAGCCAGTGGGTGGGCA...AGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGAGGCTACAAGTGTGCATCCCCCAGGCCACCATCCTGTTCTGTGACAGCGAGAAATTGGCTCCGTaGTCCCCTCTGCTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALRLQVCIPQATILFCDSEKLAP*SPLLAS Trigger: GCTGGCTAGCAGAGGGGACCACGGAGCCAATTTCTC...GCTGTCACAGAACAGGATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | TCTACCATTCTGTTCAAAAGCAGCAGCAGCTGTTGCCCTGCAGGGGGTCCAGGCTCCTGGGTCGGCATCTaGCCTCCCAGCTCCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: STILFKSSSSCCPAGGPGSWVGI*PPSSRY Trigger: ATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGA...GCCTGGACCCCCTGCAGGGCAACAGCTGCTGCTGCTTTTGAACAGAATGGTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | ACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCAACTTCACCACCCCGATaGGCAGCAGGGCACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: THVIFPQTLTASAAGSRPTSPPR*AAGHHL Trigger: CAGATGGTGCCCTGCTGCCCATCGGGGTGGTGAAGT...TGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | TTCTGTTCAAAAGCAGCAGCAGCTGTTGCCCTGCAGGGGGTCCAGGCAGGAGTCCGGACGACTGCACGGTaGCACAGTTCTCAAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: FCSKAAAAVALQGVQAGVRTTAR*HSSQST Trigger: TGTGCTTTGAGAACTGTGGCACCGTGCAGTCGTCCG...GACTCCTGCCTGGACCCCCTGCAGGGCAACAGCTGCTGCTGCTTTTGAACAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | ACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCATCCTTGCCTACTTGCTaGCAGGCTGGCAGAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: THVIFPQTLTASAAGSRPSLPTC*QAGRGL Trigger: GAGACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGA...TGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | GCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTAAGGAGTACTGTTAAGGTCCTCTaGGTCTCCAGGATCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AGRGAYPPTAACTTLLRSTVKVL*VSRIWS Trigger: GGACCAGATCCTGGAGACGCAGAGGACCTTAACAGT...ACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | ACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCACAGCAGGGCACCATCTaGCTTCCGTCTGCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: THVIFPQTLTASAAGSRPQQGTI*LPSAGH Trigger: ATGACCTGCAGACGGAAGGCAGATGGTGCCCTGCTG...TGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | AGAGAAACCCTCGACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCTCCGAGACCTCCAGCTaGCTCAGGGTCAGGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: RETLDPCDLSPDSHSICSSETSS*LRVRTG Trigger: TCCGGTCCTGACCCTGAGCCAGCTGGAGGTCTCGGA...GCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGTCGAGGGTTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR TCA 90 bp | GTAGAGAAACCCTCGACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCACAGGGATCACAACGGTaGCCAGGGCCAGGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VEKPSTHVIFPQTLTASAQGSQR*PGPGAE Trigger: CTCTGCTCCTGGCCCTGGTCACCGTTGTGATCCCTG...TGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGTCGAGGGTTTCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | TTCTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTAGCAGGAAGGCTTCTCTaGGATGGATGGATACCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FCAGRGAYPPTAACTTLLAGRLL*DGWIPE Trigger: CTCAGGTATCCATCCATCCCAGAGAAGCCTTCCTGC...TAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCAATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTTGCGGCATGAGAAATTaGCTCCGTGGTCCCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGAIENEVSVSWLKVHRACGMRN*LRGPLC Trigger: GCAGAGGGGACCACGGAGCCAATTTCTCATGCCGCA...AGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTATTGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CAA 72 bp | GCTGTCTACCATTCTGTTCAAAAGCAGCAGCAGCTGTaGCCCTGCAGGGGGTCCAGGCAGGAGTCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: AVYHSVQKQQQL*PCRGSRQESHP Trigger: TGGATGAGACTCCTGCCTGGACCCCCTGCAGGGCAACAGCTGCTGCTGCTTTTGAACAGAATGGTAGACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR TCA 90 bp | GAAAGGTTTCTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCATTCATCTCCTGTTTaGCAGACTTCACCACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: ERFLCWEGCLPSHSSLHDHSSPV*QTSPPR Trigger: TCGGGGTGGTGAAGTCTGTCAAACAGGAGATGAATG...GTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAGAAACCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | ATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGAGGTCCTTGCCTACTTaGTGCCAGGCTGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IENEVSVSWLKVHRAVGGRSLPT*CQAGRG Trigger: ACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCT...CCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | TTTCTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTCAAACAGCTTCCAGTTaGGTCCACTCTCGAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FLCWEGCLPSHSSLHDPSQTASS*VHSRAH Trigger: ATGAGCTCGAGAGTGGACCCAACTGGAAGCTGTTTG...AGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GATTTCATGAGCATGAGGCTCGATTGTTCAGCTGCTAAGGCATGGTGGCTGACATCTCCTTGGGGTCCTTaGGGTGCCCACCCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DFMSMRLDCSAAKAWWLTSPWGP*GAHPLA Trigger: AGCCAGTGGGTGGGCACCCCAAGGACCCCAAGGAGA...TGTCAGCCACCATGCCTTAGCAGCTGAACAATCGAGCCTCATGCTCATGAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | AGAGAAACCCTCGACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCGCATTCAGTGTGAATTaGACCTGCGGGGTGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RETLDPCDLSPDSHSICSAFSVN*TCGVGG Trigger: GCCACCCACCCCGCAGGTCCAATTCACACTGAATGC...GCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGTCGAGGGTTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| 3UTR CAA 72 bp | CTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTaGCACGACCCTTCTAAGGAGTTGGAACATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LCWEGCLPSHSS*HDPSKELEHFL Trigger: AAGGAAATGTTCCAACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | TTAGCTCTGAGGCTACAAGTGTGCATCCCCCAGGCCACCATCCTGTTCTGTGACAACAATGCCAGCCCTTaGGGCCTGAGATCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LALRLQVCIPQATILFCDNNASP*GLRSSS Trigger: AGAACTGGATCTCAGGCCGCAAGGGCTGGCATTGTT...GTCACAGAACAGGATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAGAGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | ATGTCTTCCTTAGGCAGGAGCCCCTCAGCAGGGGCAATAGAGAATGAAGTCAGCGAGCAAAACAACTTCTaGTGGGTGCCCACCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSSLGRSPSAGAIENEVSEQNNF*WVPTSR Trigger: CCTGGAGGTGGGCACCCAGCAGAAGTTGTTTTGCTC...GCTGACTTCATTCTCTATTGCCCCTGCTGAGGGGCTCCTGCCTAAGGAAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR TCA 90 bp | ATGTCTTCCTTAGGCAGGAGCCCCTCAGCAGGGGCAATAGAGAATGAAGTCAGCTACCAAGGCAGTGGCTaGCACAGAGTCACTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MSSLGRSPSAGAIENEVSYQGSG*HRVTAV Trigger: AACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTA...GCTGACTTCATTCTCTATTGCCCCTGCTGAGGGGCTCCTGCCTAAGGAAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR GCA 90 bp | GAGGGTAAATGCTGTCTACCATTCTGTTCAAAAGCAGCAGCAGCTGTTGCCCTGACAACTTCTGCTGGGTaGCCACCTCCAGGAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: EGKCCLPFCSKAAAAVALTTSAG*PPPGGQ Trigger: CTGACCTCCTGGAGGTGGGCACCCAGCAGAAGTTGT...CAGGGCAACAGCTGCTGCTGCTTTTGAACAGAATGGTAGACAGCATTTACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GTGGAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAATACTTGCTGCCAGGCTaGCAGAGGTCTCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VEEQRTTASPHSVYVTGEYLLPG*QRSQLH Trigger: GTGGAGCTGAGACCTCTGCCAGCCTGGCAGCAAGTA...TTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GTGGAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAGGTCATCTTAGGAGATaGGTTCCCCCAGGCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEEQRTTASPHSVYVTGEGHLRR*VPPGLA Trigger: TGCCAGGCCTGGGGGAACCCATCTCCTAAGATGACC...TTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTAAGGAGTAATGACCAGCAGTACTaGCACCAGAATGATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRGAYPPTAACTTLLRSNDQQY*HQNDYS Trigger: ACTATAATCATTCTGGTGCCAGTACTGCTGGTCATT...ACTCCTTAGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GTGGAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAAGGGGTGTCGAGCTTTaGGATGGTAGCTGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VEEQRTTASPHSVYVTGERGVEL*DGSWKI Trigger: GATCTTCCAGCTACCATCCCAAAGCTCGACACCCCT...TTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | TTTCTGTGCTGGGAGGGGTGCTTACCCTCCCACAGCAGCTTGCACGACCCTTCTTGCAGTTCCAGGGTCTaGTTTTTAAACAGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLCWEGCLPSHSSLHDPSCSSRV*FLNRNF Trigger: AAAGTTCCTGTTTAAAAACCAGACCCTGGAACTGCA...AGAAGGGTCGTGCAAGCTGCTGTGGGAGGGTAAGCACCCCTCCCAGCACAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR TCA 90 bp | CACAGCATCTGCAGCAGGGTCCAGGCCATAACTTATACATTCACCTCCTCACTGTTTATGGCCTCCTCCTaGGCCTTCTGTAACTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSICSRVQAITYTFTSSLFMASS*AFCNLY Trigger: ATACAAGTTACAGAAGGCTCAGGAGGAGGCCATAAA...CAGTGAGGAGGTGAATGTATAAGTTATGGCCTGGACCCTGCTGCAGATGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CCA 90 bp | GAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAAAACTTCTCTGGGATGGATaGATACCTGAGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEQRTTASPHSVYVTGEKLLWDG*IPEHHQ Trigger: CTGGTGATGCTCAGGTATCCATCCATCCCAGAGAAG...TTTTTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | AGCAGCACTGCTGAGAGCTGGGTCCGCGGTGCTCCACCATCCACGTaGCAGCGCAGGGTGAGGTCCTTGCCTACTTGCTGCCAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTAESWVRGAPPST*QRRVRSLPTCCQAG Trigger: GCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTGGATGGTGGAGCACCGCGGACCCAGCTCTCAGCAGTGCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | GACCCACCCTGGGGCAGGAAGGCTTCTCTGGGATGGATGGATACCTaGGCATCACCAGGCCCAGGGATCACAACGGTGACCAGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPPWGRKASLGWMDT*ASPGPGITTVTRAR Trigger: CCTGGCCCTGGTCACCGTTGTGATCCCTGGGCCTGGTGATGCTCAGGTATCCATCCATCCCAGAGAAGCCTTCCTGCCCCAGGGTGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 90 bp | GCTCCACCATCCACGTGGCAGCGCAGGGTGAGGTCCTTGCCTACTTaGTGCCAGGCTGGCAGAGGTCTCAGCTCCACACTCTCCGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: APPSTWQRRVRSLPT*CQAGRGLSSTLSGN Trigger: GTTTCCGGAGAGTGTGGAGCTGAGACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTGGATGGTGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | GATGGATGGATACCTGAGCATCACCAGGCCCAGGGATCACAACGGTaGCCAGGGCCAGGAGCAGAGGTAGCGTGGGCTTGGCACGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGWIPEHHQAQGSQR*PGPGAEVAWAWHGL Trigger: CAACCCGTGCCAAGCCCACGCTACCTCTGCTCCTGGCCCTGGTCACCGTTGTGATCCCTGGGCCTGGTGATGCTCAGGTATCCATCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | CACGTGGCAGCGCAGGGTGAGGTCCTTGCCTACTTGCTGCCAGGCTaGCAGAGGTCTCAGCTCCACACTCTCCGGAAACGAATACACGGT | + |
|
Preference number: 5 (lower is better) Translates to: HVAAQGEVLAYLLPG*QRSQLHTLRKRIHG Trigger: ACCGTGTATTCGTTTCCGGAGAGTGTGGAGCTGAGACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 90 bp | AAGCCCAGGCTGAGGTCCTCCTTGCATGAGGAAGAACAGTTCACCTaGACGGACCCACCCTGGGGCAGGAAGGCTTCTCTGGGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPRLRSSLHEEEQFT*TDPPWGRKASLGWM Trigger: CATCCATCCCAGAGAAGCCTTCCTGCCCCAGGGTGGGTCCGTGCAGGTGAACTGTTCTTCCTCATGCAAGGAGGACCTCAGCCTGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | GGCCTAGGCTCGACGCCGCTCAGAAGAACCACCTTCGACCCACTGTaGGCTTCACACTTCACAGTTACTTGGCTCCCTTCCGAGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGSTPLRRTTFDPL*ASHFTVTWLPSETS Trigger: GGAGGTCTCGGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAAGGTGGTTCTTCTGAGCGGCGTCGAGCCTAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | CAGCAGGGCACCATCTGCCTTCCGTCTGCAGGTCATCTTAGGAGATaGGTTCCCCCAGGCCTGGCATTTCAGAGTCTGCTGAGACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QQGTICLPSAGHLRR*VPPGLAFQSLLRPL Trigger: GAGGGGTCTCAGCAGACTCTGAAATGCCAGGCCTGGGGGAACCCATCTCCTAAGATGACCTGCAGACGGAAGGCAGATGGTGCCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | CCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCATAATCTCCTTGGGGTCCTaGGGGTGCCCACCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCDLSPDSHSICSRVQAIISLGS*GCPPTG Trigger: GCCAGTGGGTGGGCACCCCAAGGACCCCAAGGAGAT...TATGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | CATCCACCGAGTCCTCTTAGCTCTGAGGCTACAAGTGTGCATCCCCCAGGCCACGGCATTCAGTGTGAATaGGACCTGCGGGGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPPSPLSSEATSVHPPGHGIQCE*DLRGGW Trigger: CCACCCACCCCGCAGGTCCAATTCACACTGAATGCC...GTGGCCTGGGGGATGCACACTTGTAGCCTCAGAGCTAAGAGGACTCGGTGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | CAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGTCCGGGTCACACGTTCAGGGAGGTGGGGCTaGTCCCTTGAGTTTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRFLAEGPPGCRWVRVTRSGRWG*SLEFYG Trigger: GCCATAAAACTCAAGGGACAAGCCCCACCTCCCTGA...ACGTGTGACCCGGACCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | TTTCAGCCACTGAGTCTCCAAGCCCAGGCTGAGGTCCTCCTTGCATaGGGAAGAACAGTTCACCTGCACGGACCCACCCTGGGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FQPLSLQAQAEVLLA*GRTVHLHGPTLGQE Trigger: TTCCTGCCCCAGGGTGGGTCCGTGCAGGTGAACTGTTCTTCCTCATGCAAGGAGGACCTCAGCCTGGGCTTGGAGACTCAGTGGCTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | GCGGCAGGGTTCTGTCGAACTCCTCAGTCACCTCTACCAAGGCAGTaGCTGACACAGAGTCACTGCTGTTTGTGCTCTCCTGGGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAGFCRTPQSPLPRQ*LTQSHCCLCSPGSA Trigger: TGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAGAGGTGACTGAGGAGTTCGACAGAACCCTGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | AGAACCACCTTCGACCCACTGTGGGCTTCACACTTCACAGTTACTTaGCTCCCTTCCGAGACCTCCAGCTGGCTCAGGGTCAGGACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTTFDPLWASHFTVT*LPSETSSWLRVRTG Trigger: TCCGGTCCTGACCCTGAGCCAGCTGGAGGTCTCGGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAAGGTGGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | CATCCACCGAGTCCTCTTAGCTCTGAGGCTACAAGTGTGCATCCCCCAGGCCACGTGAATGTGATCTCCTaGGGGTCCTTGGGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPPSPLSSEATSVHPPGHVNVIS*GSLGCP Trigger: TGGGCACCCCAAGGACCCCAAGGAGATCACATTCAC...GTGGCCTGGGGGATGCACACTTGTAGCCTCAGAGCTAAGAGGACTCGGTGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | ACCCATGTGATCTTTCCCCAGACTCTCACAGCATCTGCAGCAGGGTCCAGGCCACTGCTGAGACCCCTCTaGCCAGGTCCAGTTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: THVIFPQTLTASAAGSRPLLRPL*PGPVPQ Trigger: TTGGGGAACTGGACCTGGCAAGAGGGGTCTCAGCAG...TGGCCTGGACCCTGCTGCAGATGCTGTGAGAGTCTGGGGAAAGATCACATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 90 bp | TCACCTCTACCAAGGCAGTGGCTGACACAGAGTCACTGCTGTTTGTaGTCTCCTGGGTCGGCATCTGGCCTCCCAGCTCCAGGTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: SPLPRQWLTQSHCCL*SPGSASGLPAPGIS Trigger: GGATATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | GCTGACACAGAGTCACTGCTGTTTGTGCTCTCCTGGGTCGGCATCTaGCCTCCCAGCTCCAGGTATATCCGAGCTTCAGAGGCAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ADTESLLFVLSWVGI*PPSSRYIRASEAGN Trigger: GTTTCCTGCCTCTGAAGCTCGGATATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | ACCAAGGCAGTGGCTGACACAGAGTCACTGCTGTTTGTGCTCTCCTaGGTCGGCATCTGGCCTCCCAGCTCCAGGTATATCCGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKAVADTESLLFVLS*VGIWPPSSRYIRAS Trigger: TGAAGCTCGGATATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | CACTCTCGAGCTCATCTTTCAGCCACTGAGTCTCCAAGCCCAGGCTaGGGTCCTCCTTGCATGAGGAAGAACAGTTCACCTGCACGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HSRAHLSATESPSPG*GPPCMRKNSSPART Trigger: GGTCCGTGCAGGTGAACTGTTCTTCCTCATGCAAGGAGGACCTCAGCCTGGGCTTGGAGACTCAGTGGCTGAAAGATGAGCTCGAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | CAGGGTTCTGTCGAACTCCTCAGTCACCTCTACCAAGGCAGTGGCTaGCACAGAGTCACTGCTGTTTGTGCTCTCCTGGGTCGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSVELLSHLYQGSG*HRVTAVCALLGRHL Trigger: CAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAGAGGTGACTGAGGAGTTCGACAGAACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | TTTCCCGCCACCTCCAGAGCGGCAGAGCAAAAGAAGCTTCGTTTGTaGTCCTCCGAGCTGGCATTCAGTGTGAATTGGACCTGCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPATSRAAEQKKLRL*SSELAFSVNWTCGV Trigger: CACCCCGCAGGTCCAATTCACACTGAATGCCAGCTCGGAGGATCACAAACGAAGCTTCTTTTGCTCTGCCGCTCTGGAGGTGGCGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTACAAGTGTGCATCCCCCAGGCCACCATCCTGTTCTGTGACAGCCAGAGGCTGAGGTCCTCCTaGCATGAGGAAGAACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRLQVCIPQATILFCDSQRLRSS*HEEEQF Trigger: GAACTGTTCTTCCTCATGCAAGGAGGACCTCAGCCT...CTGGCTGTCACAGAACAGGATGGTGGCCTGGGGGATGCACACTTGTAGCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | ATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGCAGAGTCACTGCTGTTaGTGCTCTCCTGGGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IENEVSVSWLKVHRAVGGQSHCC*CSPGSA Trigger: TGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTG...CCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | GTGGAGGAGCAGAGAACCACTGCCAGTCCACATAGTGTTTATGTGACTGGTGAAGTGCGGCATGAGAAATaGGCTCCGTGGTCCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEEQRTTASPHSVYVTGEVRHEK*APWSPL Trigger: CAGAGGGGACCACGGAGCCAATTTCTCATGCCGCAC...TTCACCAGTCACATAAACACTATGTGGACTGGCAGTGGTTCTCTGCTCCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | ATAGAGAATGAAGTCAGCGTTTCTTGGCTGAAGGTCCACCGGGCTGTAGGTGGGCCATTCATCTCCTGTTaGACAGACTTCACCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IENEVSVSWLKVHRAVGGPFISC*TDFTTP Trigger: CGGGGTGGTGAAGTCTGTCAAACAGGAGATGAATGG...CCCACCTACAGCCCGGTGGACCTTCAGCCAAGAAACGCTGACTTCATTCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS-3UTR CAA 90 bp | GATTTCATGAGCATGAGGCTCGATTGTTCAGCTGCTAAGGCATGGTGGCTGACAGGTGGGGCTTGTCCCTaGAGTTTTATGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFMSMRLDCSAAKAWWLTGGACP*SFMASS Trigger: GGAGGAGGCCATAAAACTCAAGGGACAAGCCCCACC...TGTCAGCCACCATGCCTTAGCAGCTGAACAATCGAGCCTCATGCTCATGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 90 bp | CTTGTATATCCTGATCTTTCTCTGGCGGTTATAAACATAAGAGGCTaGCATCACGAGGCCCACAATGACCAGCAGTACTGGCACCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LVYPDLSLAVINIRG*HHEAHNDQQYWHQN Trigger: ATTCTGGTGCCAGTACTGCTGGTCATTGTGGGCCTCGTGATGGCAGCCTCTTATGTTTATAACCGCCAGAGAAAGATCAGGATATACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 90 bp | AACATAAGAGGCTGCCATCACGAGGCCCACAATGACCAGCAGTACTaGCACCAGAATGATTATAGTCCAGTTATTTTGAGAGTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: NIRGCHHEAHNDQQY*HQNDYSPVILRVVQ Trigger: CTGTACCACTCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACTGCTGGTCATTGTGGGCCTCGTGATGGCAGCCTCTTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 90 bp | ATGACCAGCAGTACTGGCACCAGAATGATTATAGTCCAGTTATTTTaGGAGTGGTACAGTACTGTCAGGTACACATTCCTGGTGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: MTSSTGTRMIIVQLF*EWYSTVRYTFLVTF Trigger: GAATGTCACCAGGAATGTGTACCTGACAGTACTGTACCACTCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACTGCTGGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | TCCGCGGTGCTCCACCATCCACGTGGCAGCGCAGGGTaGGGTCCTTGCCTACTTGCTGCCAGGCTGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SAVLHHPRGSAG*GPCLLAARLAE Trigger: CTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTGGATGGTGGAGCACCGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | GCTGAGAGCTGGGTCCGCGGTGCTCCACCATCCACGTaGCAGCGCAGGGTGAGGTCCTTGCCTACTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AESWVRGAPPST*QRRVRSLPTCC Trigger: GCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTGGATGGTGGAGCACCGCGGACCCAGCTCTCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | AGTATCTCCTCCCCACGGAGCAGCACTGCTGAGAGCTaGGTCCGCGGTGCTCCACCATCCACGTGGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SISSPRSSTAES*VRGAPPSTWQR Trigger: GCGCTGCCACGTGGATGGTGGAGCACCGCGGACCCAGCTCTCAGCAGTGCTGCTCCGTGGGGAGGAGATACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | TCCACGTGGCAGCGCAGGGTGAGGTCCTTGCCTACTTaGTGCCAGGCTGGCAGAGGTCTCAGCTCCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: STWQRRVRSLPT*CQAGRGLSSTL Trigger: GAGTGTGGAGCTGAGACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGCTGCCACGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | AGCACCGTGAATGTGATCTCCTTGGGGTCCTTGGGGTaGCCACCCACTGGCTGGCGGCTCAGTATCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STVNVISLGSLG*PPTGWRLSISS Trigger: GGAGGAGATACTGAGCCGCCAGCCAGTGGGTGGGCACCCCAAGGACCCCAAGGAGATCACATTCACGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | GCGCAGGGTGAGGTCCTTGCCTACTTGCTGCCAGGCTaGCAGAGGTCTCAGCTCCACACTCTCCGGAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: AQGEVLAYLLPG*QRSQLHTLRKR Trigger: TCGTTTCCGGAGAGTGTGGAGCTGAGACCTCTGCCAGCCTGGCAGCAAGTAGGCAAGGACCTCACCCTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | CTAGCCAGCACCGTGAATGTGATCTCCTTGGGGTCCTaGGGGTGCCCACCCACTGGCTGGCGGCTCAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LASTVNVISLGS*GCPPTGWRLSI Trigger: GATACTGAGCCGCCAGCCAGTGGGTGGGCACCCCAAGGACCCCAAGGAGATCACATTCACGGTGCTGGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | GCAGGAAACAGGCCTTCCAGGGAGCAAAACAACTTCTaGTGGGTGCCCACCTCCAGGAGGTCAGGGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGNRPSREQNNF*WVPTSRRSGVS Trigger: CGACACCCCTGACCTCCTGGAGGTGGGCACCCAGCAGAAGTTGTTTTGCTCCCTGGAAGGCCTGTTTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | CCAAGGCAGTGGCTGACACAGAGTCACTGCTGTTTGTaGTCTCCTGGGTCGGCATCTGGCCTCCCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRQWLTQSHCCL*SPGSASGLPAP Trigger: TGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | GGAAACAGGCCTTCCAGGGAGCAAAACAACTTCTGCTaGGTGCCCACCTCCAGGAGGTCAGGGGTGTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GNRPSREQNNFC*VPTSRRSGVSS Trigger: GCTCGACACCCCTGACCTCCTGGAGGTGGGCACCCAGCAGAAGTTGTTTTGCTCCCTGGAAGGCCTGTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | TCGTTTGTGATCCTCCGAGCTGGCATTCAGTGTGAATaGGACCTGCGGGGTGGGTGGCCTAGGCTCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: SFVILRAGIQCE*DLRGGWPRLDA Trigger: GGCGTCGAGCCTAGGCCACCCACCCCGCAGGTCCAATTCACACTGAATGCCAGCTCGGAGGATCACAAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | CCAGGCCTGGCATTTCAGAGTCTGCTGAGACCCCTCTaGCCAGGTCCAGTTCCCCAAGCAGTCCGTCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: PGLAFQSLLRPL*PGPVPQAVRLV Trigger: GACGAGACGGACTGCTTGGGGAACTGGACCTGGCAAGAGGGGTCTCAGCAGACTCTGAAATGCCAGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | TGGGGCAGGAAGGCTTCTCTGGGATGGATGGATACCTaGGCATCACCAGGCCCAGGGATCACAACGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: WGRKASLGWMDT*ASPGPGITTVT Trigger: GGTCACCGTTGTGATCCCTGGGCCTGGTGATGCTCAGGTATCCATCCATCCCAGAGAAGCCTTCCTGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | CTGAGTCTCCAAGCCCAGGCTGAGGTCCTCCTTGCATaGGGAAGAACAGTTCACCTGCACGGACCCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSLQAQAEVLLA*GRTVHLHGPTL Trigger: CAGGGTGGGTCCGTGCAGGTGAACTGTTCTTCCTCATGCAAGGAGGACCTCAGCCTGGGCTTGGAGACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | CTGAGGTCCTCCTTGCATGAGGAAGAACAGTTCACCTaGACGGACCCACCCTGGGGCAGGAAGGCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LRSSLHEEEQFT*TDPPWGRKASL Trigger: CAGAGAAGCCTTCCTGCCCCAGGGTGGGTCCGTGCAGGTGAACTGTTCTTCCTCATGCAAGGAGGACCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | ACAGGCCTTCCAGGGAGCAAAACAACTTCTGCTGGGTaGCCACCTCCAGGAGGTCAGGGGTGTCGAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TGLPGSKTTSAG*PPPGGQGCRAL Trigger: CAAAGCTCGACACCCCTGACCTCCTGGAGGTGGGCACCCAGCAGAAGTTGTTTTGCTCCCTGGAAGGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | CTACCAAGGCAGTGGCTGACACAGAGTCACTGCTGTTaGTGCTCTCCTGGGTCGGCATCTGGCCTCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LPRQWLTQSHCC*CSPGSASGLPA Trigger: AGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 90 bp | AAGAACCACCTTCGACCCACTGTGGGCTTCACACTTCACAGTTACTaGGCTCCCTTCCGAGACCTCCAGCTGGCTCAGGGTCAGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: KNHLRPTVGFTLHSY*APFRDLQLAQGQDR Trigger: CCGGTCCTGACCCTGAGCCAGCTGGAGGTCTCGGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAAGGTGGTTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 90 bp | CAGTCACCTCTACCAAGGCAGTGGCTGACACAGAGTCACTGCTGTTaGTGCTCTCCTGGGTCGGCATCTGGCCTCCCAGCTCCAGGTATA | + |
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Preference number: 6 (lower is better) Translates to: QSPLPRQWLTQSHCC*CSPGSASGLPAPGI Trigger: TATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAGAGGTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 90 bp | AAAGAAGCTTCGTTTGTGATCCTCCGAGCTGGCATTCAGTGTGAATaGGACCTGCGGGGTGGGTGGCCTAGGCTCGACGCCGCTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KEASFVILRAGIQCE*DLRGGWPRLDAAQK Trigger: CTTCTGAGCGGCGTCGAGCCTAGGCCACCCACCCCGCAGGTCCAATTCACACTGAATGCCAGCTCGGAGGATCACAAACGAAGCTTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | GTGGCTGACACAGAGTCACTGCTGTTTGTGCTCTCCTaGGTCGGCATCTGGCCTCCCAGCTCCAGGTATATC | + |
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Preference number: 6 (lower is better) Translates to: VADTESLLFVLS*VGIWPPSSRYI Trigger: GATATACCTGGAGCTGGGAGGCCAGATGCCGACCCAGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | TTCGACCCACTGTGGGCTTCACACTTCACAGTTACTTaGCTCCCTTCCGAGACCTCCAGCTGGCTCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FDPLWASHFTVT*LPSETSSWLRV Trigger: GACCCTGAGCCAGCTGGAGGTCTCGGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | CTTCGACCCACTGTGGGCTTCACACTTCACAGTTACTaGGCTCCCTTCCGAGACCTCCAGCTGGCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRPTVGFTLHSY*APFRDLQLAQG Trigger: ACCCTGAGCCAGCTGGAGGTCTCGGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | CCTCCCCGATCTCGCTCAGCTCAAACAGCTTCCAGTTaGGTCCACTCTCGAGCTCATCTTTCAGCCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: PPRSRSAQTASS*VHSRAHLSATE Trigger: CTCAGTGGCTGAAAGATGAGCTCGAGAGTGGACCCAACTGGAAGCTGTTTGAGCTGAGCGAGATCGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | TCGACGCCGCTCAGAAGAACCACCTTCGACCCACTGTaGGCTTCACACTTCACAGTTACTTGGCTCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: STPLRRTTFDPL*ASHFTVTWLPS Trigger: GGAAGGGAGCCAAGTAACTGTGAAGTGTGAAGCCCACAGTGGGTCGAAGGTGGTTCTTCTGAGCGGCGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | ACCATCTGCCTTCCGTCTGCAGGTCATCTTAGGAGATaGGTTCCCCCAGGCCTGGCATTTCAGAGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TICLPSAGHLRR*VPPGLAFQSLL Trigger: CAGCAGACTCTGAAATGCCAGGCCTGGGGGAACCCATCTCCTAAGATGACCTGCAGACGGAAGGCAGATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | AGGCATGGCACACGTATGTACCATTCATCTCCTGTTTaGCAGACTTCACCACCCCGATGGGCAGCAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RHGTRMYHSSPV*QTSPPRWAAGH Trigger: GTGCCCTGCTGCCCATCGGGGTGGTGAAGTCTGTCAAACAGGAGATGAATGGTACATACGTGTGCCATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | CTGGCCTCGGAGACATTAGAGAACAATGCCAGCCCTTaGGGCCTGAGATCCAGTTCTGTGCGGCATGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LASETLENNASP*GLRSSSVRHEK Trigger: TTTCTCATGCCGCACAGAACTGGATCTCAGGCCGCAAGGGCTGGCATTGTTCTCTAATGTCTCCGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | ACCTCCAGAGCGGCAGAGCAAAAGAAGCTTCGTTTGTaGTCCTCCGAGCTGGCATTCAGTGTGAATTGGACC | + |
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Preference number: 6 (lower is better) Translates to: TSRAAEQKKLRL*SSELAFSVNWT Trigger: GGTCCAATTCACACTGAATGCCAGCTCGGAGGATCACAAACGAAGCTTCTTTTGCTCTGCCGCTCTGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS GCA 72 bp | CAGTCCGTCTCGTCCAGCCGAGGACCATACAGCACGTaGAGTTCCAGGGTCTGGTTTTTAAACAGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: QSVSSSRGPYST*SSRVWFLNRNF Trigger: AAAGTTCCTGTTTAAAAACCAGACCCTGGAACTGCACGTGCTGTATGGTCCTCGGCTGGACGAGACGGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | TTCTGTCGAACTCCTCAGTCACCTCTACCAAGGCAGTaGCTGACACAGAGTCACTGCTGTTTGTGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FCRTPQSPLPRQ*LTQSHCCLCSP Trigger: AGGAGAGCACAAACAGCAGTGACTCTGTGTCAGCCACTGCCTTGGTAGAGGTGACTGAGGAGTTCGACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CCA 72 bp | GGCTGCCATCACGAGGCCCACAATGACCAGCAGTACTaGCACCAGAATGATTATAGTCCAGTTATTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GCHHEAHNDQQY*HQNDYSPVILR Trigger: TCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACTGCTGGTCATTGTGGGCCTCGTGATGGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | TGGCCTCCTCCTGAGCCTTCTGTAACTTGTATATCCTaGTCTTTCTCTGGCGGTTATAAACATAAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WPPPEPSVTCIS*SFSGGYKHKRL Trigger: CAGCCTCTTATGTTTATAACCGCCAGAGAAAGATCAGGATATACAAGTTACAGAAGGCTCAGGAGGAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 90 bp | AATGACCAGCAGTACTGGCACCAGAATGATTATAGTCCAGTTATTTaGAGAGTGGTACAGTACTGTCAGGTACACATTCCTGGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: NDQQYWHQNDYSPVI*RVVQYCQVHIPGDI Trigger: AATGTCACCAGGAATGTGTACCTGACAGTACTGTACCACTCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACTGCTGGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS TCA 72 bp | AGTACTGGCACCAGAATGATTATAGTCCAGTTATTTTaGGAGTGGTACAGTACTGTCAGGTACACATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: STGTRMIIVQLF*EWYSTVRYTFL Trigger: CAGGAATGTGTACCTGACAGTACTGTACCACTCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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| CDS CAA 72 bp | CAGTACTGGCACCAGAATGATTATAGTCCAGTTATTTaGAGAGTGGTACAGTACTGTCAGGTACACATTCCT | + |
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Preference number: 6 (lower is better) Translates to: QYWHQNDYSPVI*RVVQYCQVHIP Trigger: AGGAATGTGTACCTGACAGTACTGTACCACTCTCAAAATAACTGGACTATAATCATTCTGGTGCCAGTACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086399.6 |
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