Pregenerated sensors for ICA1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026018Ensembl transcript IDs: ENSMUST00000027172.13, ENSMUST00000189776.2, ENSMUST00000191251.7
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGCAAGGTTGCTCCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTaGGCTGCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RQGCSSGCQCWSSLF*AAEVCENRPVDSFS Trigger: GGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCAACCTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 90 bp | AAGTCTTGCCGTTCACATAGAAGTTTCTGCAGGTTTCGGCAAGGTTaGTCCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KSCRSHRSFCRFRQG*SSGCQCWSSLFCAA Trigger: GGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCAACCTTGCCGAAACCTGCAGAAACTTCTATGTGAACGGCAAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 90 bp | AGTGAGAGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTaGCACTGCCTTCCCTCCAAACTATGTCCTCTGCCAGTAGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SERAAIHEPISSSPN*HCLPSKLCPLPVAF Trigger: AAAAGCTACTGGCAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCTCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 90 bp | GTAAAGACAGGTGTTCAGAAGTCTTGCCGTTCACATAGAAGTTTCTaGAGGTTTCGGCAAGGTTGCTCCTCAGGCTGCCAGTGCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: VKTGVQKSCRSHRSF*RFRQGCSSGCQCWS Trigger: GGACCAGCACTGGCAGCCTGAGGAGCAACCTTGCCGAAACCTGCAGAAACTTCTATGTGAACGGCAAGACTTCTGAACACCTGTCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CCA 90 bp | TGGCAGACTTCTATCTTGGATACACGCTTCTGTGTGAGGTCACAGTaGGAACTTCTCTTCAGAAAGGTAAATGTTGCACGGTTGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: WQTSILDTRFCVRSQ*ELLFRKVNVARLEP Trigger: AGGCTCCAACCGTGCAACATTTACCTTTCTGAAGAGAAGTTCCCACTGTGACCTCACACAGAAGCGTGTATCCAAGATAGAAGTCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 90 bp | ATACAAATTACACATGATAGCATAGCCTTCCATTCTTGCATCTCTTaGGAAGAAGACAGGTGGCTTGCTGGAGCTTGTCTAACTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: IQITHDSIAFHSCIS*EEDRWLAGACLTLC Trigger: ACACAAAGTTAGACAAGCTCCAGCAAGCCACCTGTCTTCTTCTCAAGAGATGCAAGAATGGAAGGCTATGCTATCATGTGTAATTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 90 bp | TTACAGCAAAGTAACAAGTATAAAGCCTTCCAAAGAAACACACCATaGTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LQQSNKYKAFQRNTP*FCDSDINLVSQYCR Trigger: TCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAAGGCTTTATACTTGTTACTTTGCTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 90 bp | GTACCGTGTACTGGAAATTTTAACTCAACAGACAGAAAGTGCTTCTaGAGAGATAATAGTTCATTAAGGCTAAGATATTCAGGAACAAGT | + |
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Preference number: 1 (lower is better) Translates to: VPCTGNFNSTDRKCF*RDNSSLRLRYSGTS Trigger: ACTTGTTCCTGAATATCTTAGCCTTAATGAACTATTATCTCTTCAGAAGCACTTTCTGTCTGTTGAGTTAAAATTTCCAGTACACGGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CAA 90 bp | AGGTTTCGGCAAGGTTGCTCCTCAGGCTGCCAGTGCTGGTCCTCATaGTTCTGCGCTGCCGAAGTTTGTGAAAACAGGCCTGTAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: RFRQGCSSGCQCWSS*FCAAEVCENRPVDS Trigger: GGAATCTACAGGCCTGTTTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCAACCTTGCCGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACACCAATCTGACGAGTTaGCTGGCAGACTTCTATCTT | + |
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Preference number: 2 (lower is better) Translates to: AVHRVRPGCWACGVDSIHTNLTS*LADFYL Trigger: AAGATAGAAGTCTGCCAGCCAACTCGTCAGATTGGT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAACACACCATGCTTCTGTaGTTCCGACATAAATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PQAASAGPHCSALPKFVKHTMLL*FRHKSG Trigger: ACCAGATTTATGTCGGAATCACAGAAGCATGGTGTG...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR GCA 90 bp | GAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTTCACATAGAAGTTTCTaGAGGTTTCGGCAAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: EPISSSPNCHCLPSKLCPSHRSF*RFRQGC Trigger: GCAACCTTGCCGAAACCTGCAGAAACTTCTATGTGA...AGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR GCA 90 bp | TTGCATCTCTTGAGAAGAAGACAGGTGGCTTGCTGGAGCTTGTCTAACTTTGTGAGGGTTAGGCCAGGTTaGTGGGCGTGTGGAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LHLLRRRQVACWSLSNFVRVRPG*WACGVD Trigger: ATCCACTCCACACGCCCAGCAACCTGGCCTAACCCT...CACAAAGTTAGACAAGCTCCAGCAAGCCACCTGTCTTCTTCTCAAGAGATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAATGTGTGAGGTCACAGTaGGAACTTCTCTTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PQAASAGPHCSALPKFVKCVRSQ*ELLFRK Trigger: CTTTCTGAAGAGAAGTTCCCACTGTGACCTCACACA...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGACCAATCTGACGAGTTaGCTGGCAGACTTCTATCTT | + |
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Preference number: 2 (lower is better) Translates to: PISSSPNCHCLPSKLCPLTNLTS*LADFYL Trigger: AAGATAGAAGTCTGCCAGCCAACTCGTCAGATTGGT...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR GCA 90 bp | TTGCATCTCTTGAGAAGAAGACAGGTGGCTTGCTGGAGCTTGTCTAACTTTGTGTCCAGCTCACCCAACTaGCACTGCCTTCCCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LHLLRRRQVACWSLSNFVSSSPN*HCLPSK Trigger: TTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGA...CACAAAGTTAGACAAGCTCCAGCAAGCCACCTGTCTTCTTCTCAAGAGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGAGAGCCTCAAGACCCCTaGACCTGTGACATCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LRRNFLHLVLFSTTENTREPQDP*TCDISH Trigger: GTGACTGATGTCACAGGTTCAGGGGTCTTGAGGCTC...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAGAGCCTCAAGACCCCTaGACCTGTGACATCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: AEVCENRPVDSFSSFYKQEPQDP*TCDISH Trigger: GTGACTGATGTCACAGGTTCAGGGGTCTTGAGGCTC...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGATGTGTGAGGTCACAGTaGGAACTTCTCTTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LRRNFLHLVLFSTTENTRCVRSQ*ELLFRK Trigger: CTTTCTGAAGAGAAGTTCCCACTGTGACCTCACACA...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGTTTCTCAGTACTGCAGACTCAAGAGTTTGTAAAATTATCCATGTACAAATACACGCTTCTGTGTaGGGTCACAGTGGGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: IWFLSTADSRVCKIIHVQIHASV*GHSGNF Trigger: GAAGTTCCCACTGTGACCTCACACAGAAGCGTGTAT...TTGTACATGGATAATTTTACAAACTCTTGAGTCTGCAGTACTGAGAAACCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATATACACGCTTCTGTGTaGGGTCACAGTGGGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNIHASV*GHSGNF Trigger: GAAGTTCCCACTGTGACCTCACACAGAAGCGTGTAT...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATCATGCACCAGTGACCTaGAACTGGCTTTCTAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNHAPVT*NWLSRD Trigger: GTCTCTAGAAAGCCAGTTTCAGGTCACTGGTGCATG...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR GCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGACAAAGAAACACACCATaGTTCTGTGATTCCGACATA | + |
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Preference number: 2 (lower is better) Translates to: LRRNFLHLVLFSTTENTRQRNTP*FCDSDI Trigger: TATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTG...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCGGAATTTTCCATGTCTaGCAGCCTTCTGCGTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLGIFHV*QPSALS Trigger: GCTTAACGCAGAAGGCTGGCAGACATGGAAAATTCC...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATTGCTCCTTAACTGTCTaGAATTTTCCATGTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNCSLTV*NFPCLP Trigger: TGGCAGACATGGAAAATTCCAGACAGTTAAGGAGCA...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CAA 90 bp | CAAACAAGTTTCTCTGATTTCAGTAAAACAGACAGTTGTCTAATCTaGTTCCATGTTGTACTTGAGGAGAAACTTTCTACATCTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QTSFSDFSKTDSCLI*FHVVLEEKLSTSSA Trigger: AGCACTAGATGTAGAAAGTTTCTCCTCAAGTACAACATGGAACAAGATTAGACAACTGTCTGTTTTACTGAAATCAGAGAAACTTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 72 bp | GAGACCGCAGGGGCAGTTCACAGGGTTAGGCCAGGTTaGTGGGCGTGTGGAGTGGATAGCATTCACCCACTC | + |
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Preference number: 3 (lower is better) Translates to: ETAGAVHRVRPG*WACGVDSIHPL Trigger: GAGTGGGTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGCCCCTGCGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CCA 72 bp | ACCGCAGGGGCAGTTCACAGGGTTAGGCCAGGTTGCTaGGCGTGTGGAGTGGATAGCATTCACCCACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: TAGAVHRVRPGC*ACGVDSIHPLW Trigger: CCAGAGTGGGTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGCCCCTGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 72 bp | GCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTaGCACTGCCTTCCCTCCAAACTATGTCCTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: AAIHEPISSSPN*HCLPSKLCPLP Trigger: TGGCAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 72 bp | TTTGACCCTCAAGTGAATCTGCAGCCCATGCACCAGTaGCCTGAAACTGGCTTTCTAGAGACCGCAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: FDPQVNLQPMHQ*PETGFLETAGA Trigger: TGCCCCTGCGGTCTCTAGAAAGCCAGTTTCAGGTCACTGGTGCATGGGCTGCAGATTCACTTGAGGGTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 72 bp | TGCTCCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTaGGCTGCCGAAGTTTGTGAAAACAGGCCTGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: CSSGCQCWSSLF*AAEVCENRPVD Trigger: ATCTACAGGCCTGTTTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 72 bp | CGTTCACATAGAAGTTTCTGCAGGTTTCGGCAAGGTTaGTCCTCAGGCTGCCAGTGCTGGTCCTCATTGTTC | + |
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Preference number: 3 (lower is better) Translates to: RSHRSFCRFRQG*SSGCQCWSSLF Trigger: GAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCAACCTTGCCGAAACCTGCAGAAACTTCTATGTGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR GCA 72 bp | GGTGTTCAGAAGTCTTGCCGTTCACATAGAAGTTTCTaGAGGTTTCGGCAAGGTTGCTCCTCAGGCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GVQKSCRSHRSF*RFRQGCSSGCQ Trigger: CTGGCAGCCTGAGGAGCAACCTTGCCGAAACCTGCAGAAACTTCTATGTGAACGGCAAGACTTCTGAACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CAA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCGACAGTTGTCTAATCTaGTTCCATGTTGTACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: RAAIHEPISSSPNCHCLPDSCLI*FHVVLE Trigger: CTCAAGTACAACATGGAACAAGATTAGACAACTGTC...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CCA 72 bp | TTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTaGATAGCATTCACCCACTCTGGTTTACTCCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: FTGLGQVAGRVE*IAFTHSGLLLK Trigger: TTTAAGGAGTAAACCAGAGTGGGTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CCA 72 bp | CCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTaGCTGGCAGACTTCTATCTTGGATACACGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: PCTTVCSTNLTS*LADFYLGYTLL Trigger: CAGAAGCGTGTATCCAAGATAGAAGTCTGCCAGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 72 bp | TCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTaGATCTGCAGCCCATGCACCAGTGACCTGAAACTG | + |
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Preference number: 3 (lower is better) Translates to: SGTSLNLFLTLK*ICSPCTSDLKL Trigger: CAGTTTCAGGTCACTGGTGCATGGGCTGCAGATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 72 bp | ACACATGATAGCATAGCCTTCCATTCTTGCATCTCTTaGGAAGAAGACAGGTGGCTTGCTGGAGCTTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: THDSIAFHSCIS*EEDRWLAGACL Trigger: TAGACAAGCTCCAGCAAGCCACCTGTCTTCTTCTCAAGAGATGCAAGAATGGAAGGCTATGCTATCATGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR CCA 72 bp | TCTATCTTGGATACACGCTTCTGTGTGAGGTCACAGTaGGAACTTCTCTTCAGAAAGGTAAATGTTGCACGG | + |
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Preference number: 3 (lower is better) Translates to: SILDTRFCVRSQ*ELLFRKVNVAR Trigger: CCGTGCAACATTTACCTTTCTGAAGAGAAGTTCCCACTGTGACCTCACACAGAAGCGTGTATCCAAGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR TCA 72 bp | AAAATTATCCATGTACAACAGTCTGCTCCACCAATCTaGCGAGTTGGCTGGCAGACTTCTATCTTGGATACA | + |
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Preference number: 3 (lower is better) Translates to: KIIHVQQSAPPI*RVGWQTSILDT Trigger: TGTATCCAAGATAGAAGTCTGCCAGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CAA 90 bp | TTGCATCTCTTGAGAAGAAGACAGGTGGCTTGCTGGAGCTTGTCTAACTTTGTGTGTTCCATGTTGTACTaGAGGAGAAACTTTCTACAT | + |
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Preference number: 3 (lower is better) Translates to: LHLLRRRQVACWSLSNFVCSMLY*RRNFLH Trigger: ATGTAGAAAGTTTCTCCTCAAGTACAACATGGAACA...CACAAAGTTAGACAAGCTCCAGCAAGCCACCTGTCTTCTTCTCAAGAGATGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CAA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCGACAGTTGTCTAATCTaGTTCCATGTTGTACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLDSCLI*FHVVLE Trigger: CTCAAGTACAACATGGAACAAGATTAGACAACTGTC...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| 3UTR-3UTR CAA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCTGTTCCATGTTGTACTaGAGGAGAAACTTTCTACAT | + |
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Preference number: 3 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLCSMLY*RRNFLH Trigger: ATGTAGAAAGTTTCTCCTCAAGTACAACATGGAACA...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR TCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACAAGGCTCCTGGGATGTaGGGCCAGTGCAGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHKAPGM*GQCRGS Trigger: GGAGCCCCTGCACTGGCCTCACATCCCAGGAGCCTT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR TCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACAGACCCGGGTCCTACTaGAGGCTCCTGGGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHRPGSY*RLLGCE Trigger: CTCACATCCCAGGAGCCTTCAGTAGGACCCGGGTCT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAAAGACCCGGGTCCTACTaGAGGCTCCTGGGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAASAGPHCSALPKFVKRPGSY*RLLGCE Trigger: CTCACATCCCAGGAGCCTTCAGTAGGACCCGGGTCT...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACAATGGCATCTGGGTTTaGGAGCGGACCCAAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHNGIWV*ERTQVC Trigger: GCAGACTTGGGTCCGCTCTCAAACCCAGATGCCATT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCCATTGTTGGGGGTGTTaGAAGCTCCATCAGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPHCWGC*KLHQRE Trigger: TTCACGCTGATGGAGCTTTCAACACCCCCAACAATG...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGAATGGCATCTGGGTTTaGGAGCGGACCCAAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLNGIWV*ERTQVC Trigger: GCAGACTTGGGTCCGCTCTCAAACCCAGATGCCATT...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCCAGGCTGACATGTCTTaGTTACCATTGTTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPQADMS*LPLLGV Trigger: CACCCCCAACAATGGTAACCAAGACATGTCAGCCTG...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| 3UTR CAA 72 bp | CAAGGTTGCTCCTCAGGCTGCCAGTGCTGGTCCTCATaGTTCTGCGCTGCCGAAGTTTGTGAAAACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGCSSGCQCWSS*FCAAEVCENRP Trigger: AGGCCTGTTTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGGAGCAACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCTAGGCAGAGCTCTTaGAACTGCTGGTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPSRQSS*NCWFSF Trigger: GAAAGAGAACCAGCAGTTGCAAGAGCTCTGCCTAGA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTTGTTTGAAGGTGTCTaGGTCAAGTTCCTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPLFEGV*VKFLRC Trigger: GCATCGCAGGAACTTGACCCAGACACCTTCAAACAA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCCATTCTGCTCACTACTaGCTGGTTATCTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPHSAHY*LVIFCS Trigger: AGAGCAGAAGATAACCAGTCAGTAGTGAGCAGAATG...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAATCCCTCTGTGCAGTCTaGAGTGAGATTTCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQAASAGPHCSALPKFVKSLCAV*SEISWS Trigger: ACTCCAGGAAATCTCACTGCAGACTGCACAGAGGGA...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGTCCCTCTGTGCAGTCTaGAGTGAGATTTCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLSLCAV*SEISWS Trigger: ACTCCAGGAAATCTCACTGCAGACTGCACAGAGGGA...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGAGGCCAATCTTTGCTTaGCTGAAGAACAGAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLRPIFA*LKNRGP Trigger: AGGCCCTCTGTTCTTCAGCCAAGCAAAGATTGGCCT...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGCAGGCTGACATGTCTTaGTTACCATTGTTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLQADMS*LPLLGV Trigger: CACCCCCAACAATGGTAACCAAGACATGTCAGCCTG...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGCATCTGAGTGTCCAATaGCATCTGGGTTTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLHLSVQ*HLGLRA Trigger: CGCTCTCAAACCCAGATGCCATTGGACACTCAGATG...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCAGTCTGCAAATAGATTaGACCAGGCTGACATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPSLQID*TRLTCL Trigger: AAGACATGTCAGCCTGGTTCAATCTATTTGCAGACT...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCTTCACAAGTTCATTaGATGTCTCCTGGATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPSSQVH*MSPGWS Trigger: ACTCCATCCAGGAGACATGCAATGAACTTGTGAAGA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGCACAAGGCCAATCTTTaGTTGGCTGAAGAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLHKANL*LAEEQR Trigger: CCTCTGTTCTTCAGCCAAGCAAAGATTGGCCTTGTG...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACAATGTTGCCACTTCTTaGTTAAGACGAGACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHNVATS*LRRDRG Trigger: TCCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACCCTCTGACTGAATGTTaGCACTTCTTGCTTAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHPLTEC*HFLLKT Trigger: CGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGG...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAATTGTTTGAAGGTGTCTaGGTCAAGTTCCTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PQAASAGPHCSALPKFVKLFEGV*VKFLRC Trigger: GCATCGCAGGAACTTGACCCAGACACCTTCAAACAA...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTTGCTGTTTCTCACTTaGTTCTGTACTTTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAAIHEPISSSPNCHCLPLLFLT*FCTFLN Trigger: GTTCAGAAAAGTACAGAATCAAGTGAGAAACAGCAA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGTCTTCACAAGTTCATTaGATGTCTCCTGGATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISSSPNCHCLPSKLCPLSSQVH*MSPGWS Trigger: ACTCCATCCAGGAGACATGCAATGAACTTGTGAAGA...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTACTTTTCCATTTGTTTaGAGGTGTCTGGGTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPISSSPNCHCLPSKLCPTFPFV*RCLGQV Trigger: AACTTGACCCAGACACCTTCAAACAAATGGAAAAGT...AGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACACGTTGAGTCTTAGCTaGTATTTCTCAACTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVHRVRPGCWACGVDSIHTLSLS*YFSTIF Trigger: GAAGATAGTTGAGAAATACCAGCTAAGACTCAACGT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| 3UTR CAA 72 bp | AAGAAGAGTAGCACAGACGACCTAAGCTATCATTTCTaGAGGTTGATGGCAGTGGTTGCACTGGCACTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKSSTDDLSYHF*RLMAVVALALA Trigger: GGCTAGTGCCAGTGCAACCACTGCCATCAACCTCAAGAAATGATAGCTTAGGTCGTCTGTGCTACTCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAAGAGGCTGTTCAGAAATaGGAATTCTTTCTCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PQAASAGPHCSALPKFVKEAVQK*EFFLKI Trigger: GATTTTGAGAAAGAATTCTCATTTCTGAACAGCCTC...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATAAGGCTCCTGGGATGTaGGGCCAGTGCAGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNKAPGM*GQCRGS Trigger: GGAGCCCCTGCACTGGCCTCACATCCCAGGAGCCTT...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTCAATCTTTGCTTGGCTaGAGAACAGAGGGCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVKLSMYNSLLHQSDELAQSLLG*RTEGLA Trigger: GGCAAGGCCCTCTGTTCTTCAGCCAAGCAAAGATTG...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCAAATGGCCCTCTGACTaGATGTTGCCACTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPCFCDSDINLVSQYCRLKWPSD*MLPLLA Trigger: AGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTT...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGACTGTGCAGTCTGCAGTaGGATTTCCTGGAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRLCSLQ*DFLECL Trigger: AAGACACTCCAGGAAATCTCACTGCAGACTGCACAG...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCAAGAACAGAGGGCCTTaGCAGCAGCATCCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TPCFCDSDINLVSQYCRLKNRGP*QQHPSF Trigger: AAATGATGGATGCTGCTGGCAAGGCCCTCTGTTCTT...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCTCTGGGTCAAGTTCCTaGGATGCATCTTTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPCFCDSDINLVSQYCRLSGSSS*DASFIH Trigger: GTGGATGAAAGATGCATCGCAGGAACTTGACCCAGA...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GTAAACAACTTAATTAAAATGTCCCTTGTGGGACATCAGCCACAATGGCCTGGAGGTTATCTTCTGCTCTaGGTTGCTCAGAGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNNLIKMSLVGHQPQWPGGYLLL*VAQRNP Trigger: TGGATTCCTCTGAGCAACTCAGAGCAGAAGATAACC...TCCAGGCCATTGTGGCTGATGTCCCACAAGGGACATTTTAATTAAGTTGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCCATTCTGCTCACTACTaGCTGGTTATCTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPCFCDSDINLVSQYCRLHSAHY*LVIFCS Trigger: AGAGCAGAAGATAACCAGTCAGTAGTGAGCAGAATG...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAGTCTCCTGGATGGAGTaGAAAACCTCCAACTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: AEVCENRPVDSFSSFYKQVSWME*KTSNLA Trigger: CGCTAAGTTGGAGGTTTTTCACTCCATCCAGGAGAC...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GTAAACAACTTAATTAAAATGTCCCTTGTGGGACATCAGCCACAATGGCCTGGACTGGTAGGTAGTGAGTaGGTGAGACAGCATATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNNLIKMSLVGHQPQWPGLVGSE*VRQHIA Trigger: TGCAATATGCTGTCTCACTCACTCACTACCTACCAG...TCCAGGCCATTGTGGCTGATGTCCCACAAGGGACATTTTAATTAAGTTGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGACTGGTAGGTAGTGAGTaGGTGAGACAGCATATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRLVGSE*VRQHIA Trigger: TGCAATATGCTGTCTCACTCACTCACTACCTACCAG...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTCCAAAGAAACACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGCTGTGCAGTCTGCAGTaGGATTTCCTGGAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQRNTPCFCDSDINLVSQLCSLQ*DFLECL Trigger: AAGACACTCCAGGAAATCTCACTGCAGACTGCACAG...CTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGACACAAGGCCAATCTTTaGTTGGCTGAAGAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRHKANL*LAEEQR Trigger: CCTCTGTTCTTCAGCCAAGCAAAGATTGGCCTTGTG...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCAATGTTGCCACTTCTTaGTTAAGACGAGACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPCFCDSDINLVSQYCRLNVATS*LRRDRG Trigger: TCCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATT...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAGGTTATCTTCTGCTCTaGGTTGCTCAGAGGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEVCENRPVDSFSSFYKQGYLLL*VAQRNP Trigger: TGGATTCCTCTGAGCAACTCAGAGCAGAAGATAACC...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGACCTCTGACTGAATGTTaGCACTTCTTGCTTAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRPLTEC*HFLLKT Trigger: CGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGG...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAGTCAAGTTCCTGCGATaGATCTTTCATCCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVCENRPVDSFSSFYKQVKFLR*IFHPQQ Trigger: CTGCTGTGGATGAAAGATGCATCGCAGGAACTTGAC...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGATGCATGTCTCCTGGATaGAGTGAAAAACCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRCMSPG*SEKPPT Trigger: AGTTGGAGGTTTTTCACTCCATCCAGGAGACATGCA...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCCAATCTTTGCTTGGCTaGAGAACAGAGGGCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLQSLLG*RTEGLA Trigger: GGCAAGGCCCTCTGTTCTTCAGCCAAGCAAAGATTG...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGAAGTCTGCAAATAGATTaGACCAGGCTGACATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRSLQID*TRLTCL Trigger: AAGACATGTCAGCCTGGTTCAATCTATTTGCAGACT...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAGAAACACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTGCATGTCTCCTGGATaGAGTGAAAAACCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FQRNTPCFCDSDINLVSQCMSPG*SEKPPT Trigger: AGTTGGAGGTTTTTCACTCCATCCAGGAGACATGCA...CTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | ATCTGGTTTCTCAGTACTGCAGACTCAAGAGTTTGTAAAATTATCCATGTACAACATTGTTGGGGGTGTTaGAAGCTCCATCAGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IWFLSTADSRVCKIIHVQHCWGC*KLHQRE Trigger: TTCACGCTGATGGAGCTTTCAACACCCCCAACAATG...TTGTACATGGATAATTTTACAAACTCTTGAGTCTGCAGTACTGAGAAACCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAGAAACTTTCTACATCTAGTGCTGTTCTCCACAACAGAAAACACCCGAAGTTCTTCTGCATTCTaGTCACTACTGACTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRRNFLHLVLFSTTENTRSSSAF*SLLTGY Trigger: ATAACCAGTCAGTAGTGAGCAGAATGCAGAAGAACT...TCGGGTGTTTTCTGTTGTGGAGAACAGCACTAGATGTAGAAAGTTTCTCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTTTCTCAGTACTGCAGACTCAAGAGTTTGTAAAATTATCCATGTACAACATCTGAGTGTCCAATaGCATCTGGGTTTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IWFLSTADSRVCKIIHVQHLSVQ*HLGLRA Trigger: CGCTCTCAAACCCAGATGCCATTGGACACTCAGATG...TTGTACATGGATAATTTTACAAACTCTTGAGTCTGCAGTACTGAGAAACCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAATGGCCCTCTGACTaGATGTTGCCACTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLKWPSD*MLPLLA Trigger: AGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTT...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCTCAGAAATGGCCCTCTaGCTGAATGTTGCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLSEMAL*LNVATS Trigger: AGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGA...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATTCAGAAATGGCCCTCTaGCTGAATGTTGCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNSEMAL*LNVATS Trigger: AGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGA...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | TTCCAAAGAAACACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGACTTTTCCATTTGTTTaGAGGTGTCTGGGTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQRNTPCFCDSDINLVSQTFPFV*RCLGQV Trigger: AACTTGACCCAGACACCTTCAAACAAATGGAAAAGT...CTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTAGTTCTTCTGCATTCTaGTCACTACTGACTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FVKLSMYNSLLHQSDELASSSAF*SLLTGY Trigger: ATAACCAGTCAGTAGTGAGCAGAATGCAGAAGAACT...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATGTCAAGTTCCTGCGATaGATCTTTCATCCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNVKFLR*IFHPQQ Trigger: CTGCTGTGGATGAAAGATGCATCGCAGGAACTTGAC...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCTCTGGGTCAAGTTCCTaGGATGCATCTTTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLSGSSS*DASFIH Trigger: GTGGATGAAAGATGCATCGCAGGAACTTGACCCAGA...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCTCTAGGCAGAGCTCTTaGAACTGCTGGTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLSRQSS*NCWFSF Trigger: GAAAGAGAACCAGCAGTTGCAAGAGCTCTGCCTAGA...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTACGTTGAGTCTTAGCTaGTATTTCTCAACTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVKLSMYNSLLHQSDELATLSLS*YFSTIF Trigger: GAAGATAGTTGAGAAATACCAGCTAAGACTCAACGT...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTTTCTCAGTACTGCAGACTCAAGAGTTTGTAAAATTATCCATGTACAAAGCAAGTCCACTTTCTaGCAGACATCCTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWFLSTADSRVCKIIHVQSKSTF*QTSFFN Trigger: GTTAAAGAAGGATGTCTGCCAGAAAGTGGACTTGCT...TTGTACATGGATAATTTTACAAACTCTTGAGTCTGCAGTACTGAGAAACCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATAGCAAGTCCACTTTCTaGCAGACATCCTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNSKSTF*QTSFFN Trigger: GTTAAAGAAGGATGTCTGCCAGAAAGTGGACTTGCT...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATGAGGCTGTTCAGAAATaGGAATTCTTTCTCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNEAVQK*EFFLKI Trigger: GATTTTGAGAAAGAATTCTCATTTCTGAACAGCCTC...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCCAATGGCATCTGGGTTaGAGAGCGGACCCAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAAIHEPISSSPNCHCLPQWHLG*RADPSL Trigger: CAGACTTGGGTCCGCTCTCAAACCCAGATGCCATTG...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCAATGGCATCTGGGTTaGAGAGCGGACCCAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPISSSPNCHCLPSKLCPQWHLG*RADPSL Trigger: CAGACTTGGGTCCGCTCTCAAACCCAGATGCCATTG...AGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTGAAGAACAGAGGGCCTaGCCAGCAGCATCCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: EPISSSPNCHCLPSKLCPEEQRA*PAASII Trigger: AATGATGGATGCTGCTGGCAAGGCCCTCTGTTCTTC...AGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS GCA 90 bp | GAGTACACAAGGCCAATCTTTGCTTGGCTGAAGAACAGAGGGCCTTaGCAGCAGCATCCATCATTTCGCCAGCTTGAGTCGAATCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EYTRPIFAWLKNRGP*QQHPSFRQLESNPA Trigger: AGCGGGATTCGACTCAAGCTGGCGAAATGATGGATGCTGCTGGCAAGGCCCTCTGTTCTTCAGCCAAGCAAAGATTGGCCTTGTGTACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCTGAACTTTTCCATTaGTTTGAAGGTGTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAAIHEPISSSPNCHCLPSELFH*FEGVWV Trigger: GACCCAGACACCTTCAAACAAATGGAAAAGTTCAGA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCGACAAAGCTACCTTATaGAGGTCTGTAGTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RAAIHEPISSSPNCHCLPDKATL*RSVVRQ Trigger: TTGTCTCACTACAGACCTCAATAAGGTAGCTTTGTC...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GCAGTTCACAGGGTTAGGCCAGGTTGCTGGGCGTGTGGAGTGGATAGCATTCACATGTCTTGGTTACCATaGTTGGGGGTGTTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVHRVRPGCWACGVDSIHMSWLP*LGVLKA Trigger: AGCTTTCAACACCCCCAACAATGGTAACCAAGACAT...GTGAATGCTATCCACTCCACACGCCCAGCAACCTGGCCTAACCCTGTGAACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS GCA 90 bp | GAACTTTTCCATTTGTTTGAAGGTGTCTGGGTCAAGTTCCTGCGATaGATCTTTCATCCACAGCAGGGCTCCTCTGTACTCTGTGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELFHLFEGVWVKFLR*IFHPQQGSSVLCAG Trigger: GCCCGCACAGAGTACAGAGGAGCCCTGCTGTGGATGAAAGATGCATCGCAGGAACTTGACCCAGACACCTTCAAACAAATGGAAAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGATCTTCACAAGTTCATaGCATGTCTCCTGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PISSSPNCHCLPSKLCPLIFTSS*HVSWME Trigger: CTCCATCCAGGAGACATGCAATGAACTTGTGAAGAT...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | AGAGCGGCAATCCATGAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTTCTTTCCCGTCGCTTaGATAAAGACTTGTTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RAAIHEPISSSPNCHCLPFFPVA*IKTCLV Trigger: AACTAAACAAGTCTTTATCAAAGCGACGGGAAAGAA...GGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTCATGGATTGCCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GAGCCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTTCTGAACTTTTCCATTaGTTTGAAGGTGTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPISSSPNCHCLPSKLCPSELFH*FEGVWV Trigger: GACCCAGACACCTTCAAACAAATGGAAAAGTTCAGA...AGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGGACAAAGCTACCTTATaGAGGTCTGTAGTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PISSSPNCHCLPSKLCPLDKATL*RSVVRQ Trigger: TTGTCTCACTACAGACCTCAATAAGGTAGCTTTGTC...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS TCA 90 bp | GCAAGGTATCTGAGTGTTCTGATCTCTTTTGGGAAGCCCAGATGTTaGAAGCTCCATCAGCGTGAAGGCCAAGGTCAAAGAGCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARYLSVLISFGKPRC*KLHQREGQGQRAVK Trigger: CTTCACAGCTCTTTGACCTTGGCCTTCACGCTGATGGAGCTTTCAACATCTGGGCTTCCCAAAAGAGATCAGAACACTCAGATACCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189776.2 |
||
| CDS GCA 90 bp | GATGGAGTGAAAAACCTCCAACTTAGCGTCCAGTTCTGCATCGGATaGAACCACATGCTCGTCCTCCTTCTTTCCCGTCGCTTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: DGVKNLQLSVQFCIG*NHMLVLLLSRRFDK Trigger: TTTATCAAAGCGACGGGAAAGAAGGAGGACGAGCATGTGGTTGCATCCGATGCAGAACTGGACGCTAAGTTGGAGGTTTTTCACTCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS GCA 90 bp | GTTAATGGTCACCAAGGTGTCAGAAATGGCCCTCTGACTGAATGTTaGCACTTCTTGCTTAAGACGAGACAGGGGAGTACACAAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VNGHQGVRNGPLTEC*HFLLKTRQGSTQGQ Trigger: TTGGCCTTGTGTACTCCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGACACCTTGGTGACCATTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | CCGATTTCCAGCTCACCCAACTGCCACTGCCTTCCCTCCAAACTATGTCCTCTGCGCTTTGATAAAGACTaGTTTAGTTCTCCAGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PISSSPNCHCLPSKLCPLRFDKD*FSSPVV Trigger: AACTACTGGAGAACTAAACAAGTCTTTATCAAAGCG...CAGAGGACATAGTTTGGAGGGAAGGCAGTGGCAGTTGGGTGAGCTGGAAATCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGCTGCCAGTGCTGGTCCTCATTGTTCTGCGCTGCCGAAGTTTGTGAAATTCTTTCCCGTCGCTTaGATAAAGACTTGTTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PQAASAGPHCSALPKFVKFFPVA*IKTCLV Trigger: AACTAAACAAGTCTTTATCAAAGCGACGGGAAAGAA...TTTCACAAACTTCGGCAGCGCAGAACAATGAGGACCAGCACTGGCAGCCTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS GCA 90 bp | AAAACCTCCAACTTAGCGTCCAGTTCTGCATCGGATGCAACCACATaGTCGTCCTCCTTCTTTCCCGTCGCTTTGATAAAGACTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KTSNLASSSASDATT*SSSFFPVALIKTCL Trigger: TAAACAAGTCTTTATCAAAGCGACGGGAAAGAAGGAGGACGAGCATGTGGTTGCATCCGATGCAGAACTGGACGCTAAGTTGGAGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS GCA 90 bp | TTTCTGAACTTTTCCATTTGTTTGAAGGTGTCTGGGTCAAGTTCCTaGGATGCATCTTTCATCCACAGCAGGGCTCCTCTGTACTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLNFSICLKVSGSSS*DASFIHSRAPLYSV Trigger: CACAGAGTACAGAGGAGCCCTGCTGTGGATGAAAGATGCATCGCAGGAACTTGACCCAGACACCTTCAAACAAATGGAAAAGTTCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAAAGGCCAATCTTTGCTaGGCTGAAGAACAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEVCENRPVDSFSSFYKQKANLC*AEEQRA Trigger: GGCCCTCTGTTCTTCAGCCAAGCAAAGATTGGCCTT...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTAAGGCCAATCTTTGCTaGGCTGAAGAACAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FVKLSMYNSLLHQSDELAKANLC*AEEQRA Trigger: GGCCCTCTGTTCTTCAGCCAAGCAAAGATTGGCCTT...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAAACAACTGCCTTCTGTTaGTCCCTCTGTGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEVCENRPVDSFSSFYKQTTAFC*SLCAVC Trigger: GCAGACTGCACAGAGGGACAAACAGAAGGCAGTTGT...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS-3UTR CAA 90 bp | TTCCAAAGAAACACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGACAACTGCCTTCTGTTaGTCCCTCTGTGCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQRNTPCFCDSDINLVSQTTAFC*SLCAVC Trigger: GCAGACTGCACAGAGGGACAAACAGAAGGCAGTTGT...CTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTGAATGTTGCCACTTCTaGCTTAAGACGAGACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FVKLSMYNSLLHQSDELAECCHF*LKTRQG Trigger: CCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATTC...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGAAACACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGGAATGTTGCCACTTCTaGCTTAAGACGAGACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FQRNTPCFCDSDINLVSQECCHF*LKTRQG Trigger: CCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATTC...CTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGTGTTTCTTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCTCCTCTGATATAACGTaGAGTCTTAGCTGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPCFCDSDINLVSQYCRLSSDIT*SLSWYF Trigger: GAAATACCAGCTAAGACTCAACGTTATATCAGAGGA...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | AGTTCATTAAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCGAAGAACAGAGGGCCTaGCCAGCAGCATCCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRLRYSGTSLNLFLTLEEQRA*PAASII Trigger: AATGATGGATGCTGCTGGCAAGGCCCTCTGTTCTTC...GAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTTAATGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | ACACCATGCTTCTGTGATTCCGACATAAATCTGGTTTCTCAGTACTGCAGACTCAACTTTTCCATTTGTTaGAAGGTGTCTGGGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPCFCDSDINLVSQYCRLNFSIC*KVSGSS Trigger: ACTTGACCCAGACACCTTCAAACAAATGGAAAAGTT...GAGTCTGCAGTACTGAGAAACCAGATTTATGTCGGAATCACAGAAGCATGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | TTTGTAAAATTATCCATGTACAACAGTCTGCTCCACCAATCTGACGAGTTGGCTTCCTCTGATATAACGTaGAGTCTTAGCTGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVKLSMYNSLLHQSDELASSDIT*SLSWYF Trigger: GAAATACCAGCTAAGACTCAACGTTATATCAGAGGA...AGCCAACTCGTCAGATTGGTGGAGCAGACTGTTGTACATGGATAATTTTACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | GCCGAAGTTTGTGAAAACAGGCCTGTAGATTCCTTTTCCAGTTTCTACAAACAACGCTTTGATAAAGACTaGTTTAGTTCTCCAGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AEVCENRPVDSFSSFYKQRFDKD*FSSPVV Trigger: AACTACTGGAGAACTAAACAAGTCTTTATCAAAGCG...TTGTTTGTAGAAACTGGAAAAGGAATCTACAGGCCTGTTTTCACAAACTTCGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATATGTCTTGGTTACCATaGTTGGGGGTGTTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNMSWLP*LGVLKA Trigger: AGCTTTCAACACCCCCAACAATGGTAACCAAGACAT...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS-3UTR CAA 90 bp | AAGGCTAAGATATTCAGGAACAAGTCTGAATTTGTTTTTGACCCTCAAGTGAATAACTTTTCCATTTGTTaGAAGGTGTCTGGGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAKIFRNKSEFVFDPQVNNFSIC*KVSGSS Trigger: ACTTGACCCAGACACCTTCAAACAAATGGAAAAGTT...ATTCACTTGAGGGTCAAAAACAAATTCAGACTTGTTCCTGAATATCTTAGCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS CCA 72 bp | GAGGAAGTGAGAGACCCGGGTCCTACTGAAGGCTCCTaGGATGTGAGGCCAGTGCAGGGGCTCCCACACGCG | + |
|
Preference number: 6 (lower is better) Translates to: EEVRDPGPTEGS*DVRPVQGLPHA Trigger: CGCGTGTGGGAGCCCCTGCACTGGCCTCACATCCCAGGAGCCTTCAGTAGGACCCGGGTCTCTCACTTCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CCA 72 bp | GATGTGAGGCCAGTGCAGGGGCTCCCACACGCGGGCTaGCATTCCTGTGTAAACTCACTAGCACTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVRPVQGLPHAG*HSCVNSLALEE Trigger: TTCTTCAAGTGCTAGTGAGTTTACACAGGAATGCCAGCCCGCGTGTGGGAGCCCCTGCACTGGCCTCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | AGCCAGGAAGTCGTACGGATGAAAGCCAGCGCAGGCCTCTTGGATTaGGGTCATCATCTGAGCTGTTTTCTCCCAGAACCCAAGCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SQEVVRMKASAGLLD*GHHLSCFLPEPKQC Trigger: ACACTGCTTGGGTTCTGGGAGAAAACAGCTCAGATGATGACCCAAATCCAAGAGGCCTGCGCTGGCTTTCATCCGTACGACTTCCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CTTGAGAGCCAGGAAGTCGTACGGATGAAAGCCAGCGCAGGCCTCTaGGATTTGGGTCATCATCTGAGCTGTTTTCTCCCAGAACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LESQEVVRMKASAGL*DLGHHLSCFLPEPK Trigger: CTTGGGTTCTGGGAGAAAACAGCTCAGATGATGACCCAAATCCAAGAGGCCTGCGCTGGCTTTCATCCGTACGACTTCCTGGCTCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS TCA 72 bp | CCAGAACCCAAGCAGTGTTCTCTGGTAGGTAGTGAGTaGGTGAGACAGCATATTGCAGCGACTAGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEPKQCSLVGSE*VRQHIAATSSQ Trigger: CTGGGAGCTAGTCGCTGCAATATGCTGTCTCACTCACTCACTACCTACCAGAGAACACTGCTTGGGTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS TCA 72 bp | AAGCCAGCGCAGGCCTCTTGGATTTGGGTCATCATCTaGGCTGTTTTCTCCCAGAACCCAAGCAGTGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KPAQASWIWVII*AVFSQNPSSVL Trigger: GAGAACACTGCTTGGGTTCTGGGAGAAAACAGCTCAGATGATGACCCAAATCCAAGAGGCCTGCGCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 72 bp | CAGGAAGTCGTACGGATGAAAGCCAGCGCAGGCCTCTaGGATTTGGGTCATCATCTGAGCTGTTTTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QEVVRMKASAGL*DLGHHLSCFLP Trigger: TGGGAGAAAACAGCTCAGATGATGACCCAAATCCAAGAGGCCTGCGCTGGCTTTCATCCGTACGACTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CCAATGGCATCTGGGTTTGAGAGCGGACCCAAGTCTGCAAATAGATaGAACCAGGCTGACATGTCTTGGTTACCATTGTTGGGGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PMASGFESGPKSANR*NQADMSWLPLLGVL Trigger: CAACACCCCCAACAATGGTAACCAAGACATGTCAGCCTGGTTCAATCTATTTGCAGACTTGGGTCCGCTCTCAAACCCAGATGCCATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS TCA 72 bp | TTACCATTGTTGGGGGTGTTGAAAGCTCCATCAGCGTaGAGGCCAAGGTCAAAGAGCTGTGAAGGAAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPLLGVLKAPSA*RPRSKSCEGRN Trigger: GTTCCTTCCTTCACAGCTCTTTGACCTTGGCCTTCACGCTGATGGAGCTTTCAACACCCCCAACAATGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | AGGCTGACATGTCTTGGTTACCATTGTTGGGGGTGTTaGAAGCTCCATCAGCGTGAAGGCCAAGGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLTCLGYHCWGC*KLHQREGQGQR Trigger: TCTTTGACCTTGGCCTTCACGCTGATGGAGCTTTCAACACCCCCAACAATGGTAACCAAGACATGTCAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | TTTTGGGAAGCCCAGATGTTGAAAGCTCCATCAGCGTaGAGGCCAAGGTCAAAGAGCTGTGAAGGAAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FWEAQMLKAPSA*RPRSKSCEGRN Trigger: GTTCCTTCCTTCACAGCTCTTTGACCTTGGCCTTCACGCTGATGGAGCTTTCAACATCTGGGCTTCCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189776.2 |
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| CDS GCA 72 bp | AACTTAGCGTCCAGTTCTGCATCGGATGCAACCACATaGTCGTCCTCCTTCTTTCCCGTCGCTTTGATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NLASSSASDATT*SSSFFPVALIK Trigger: CTTTATCAAAGCGACGGGAAAGAAGGAGGACGAGCATGTGGTTGCATCCGATGCAGAACTGGACGCTAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS GCA 72 bp | GATGGAGTGAAAAACCTCCAACTTAGCGTCCAGTTCTaGATCGGATGCAACCACATGCTCGTCCTCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DGVKNLQLSVQF*IGCNHMLVLLL Trigger: AAGAAGGAGGACGAGCATGTGGTTGCATCCGATGCAGAACTGGACGCTAAGTTGGAGGTTTTTCACTCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS GCA 72 bp | CATTTGTTTGAAGGTGTCTGGGTCAAGTTCCTGCGATaGATCTTTCATCCACAGCAGGGCTCCTCTGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: HLFEGVWVKFLR*IFHPQQGSSVL Trigger: GAGTACAGAGGAGCCCTGCTGTGGATGAAAGATGCATCGCAGGAACTTGACCCAGACACCTTCAAACAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 72 bp | GTCAGAAATGGCCCTCTGACTGAATGTTGCCACTTCTaGCTTAAGACGAGACAGGGGAGTACACAAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRNGPLTECCHF*LKTRQGSTQGQ Trigger: TTGGCCTTGTGTACTCCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CACCAAGGTGTCAGAAATGGCCCTCTGACTGAATGTTGCCACTTCTaGCTTAAGACGAGACAGGGGAGTACACAAGGCCAATCTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HQGVRNGPLTECCHF*LKTRQGSTQGQSLL Trigger: AAGCAAAGATTGGCCTTGTGTACTCCCCTGTCTCGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGACACCTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | CGGTTAATGGTCACCAAGGTGTCAGAAATGGCCCTCTaGCTGAATGTTGCCACTTCTTGCTTAAGACGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLMVTKVSEMAL*LNVATSCLRRD Trigger: GTCTCGTCTTAAGCAAGAAGTGGCAACATTCAGTCAGAGGGCCATTTCTGACACCTTGGTGACCATTAACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | CTGGGTTTGAGAGCGGACCCAAGTCTGCAAATAGATTaGACCAGGCTGACATGTCTTGGTTACCATTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLRADPSLQID*TRLTCLGYHCW Trigger: CCAACAATGGTAACCAAGACATGTCAGCCTGGTTCAATCTATTTGCAGACTTGGGTCCGCTCTCAAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | CTGAGTGTTCTGATCTCTTTTGGGAAGCCCAGATGTTaGAAGCTCCATCAGCGTGAAGGCCAAGGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSVLISFGKPRC*KLHQREGQGQR Trigger: TCTTTGACCTTGGCCTTCACGCTGATGGAGCTTTCAACATCTGGGCTTCCCAAAAGAGATCAGAACACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189776.2 |
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| CDS CAA 72 bp | CTTATTGAGGTCTGTAGTGAGACAACTGCCTTCTGTTaGTCCCTCTGTGCAGTCTGCAGTGAGATTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIEVCSETTAFC*SLCAVCSEISW Trigger: CCAGGAAATCTCACTGCAGACTGCACAGAGGGACAAACAGAAGGCAGTTGTCTCACTACAGACCTCAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CAAAGCTACCTTATTGAGGTCTGTAGTGAGACAACTGCCTTCTGTTaGTCCCTCTGTGCAGTCTGCAGTGAGATTTCCTGGAGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSYLIEVCSETTAFC*SLCAVCSEISWSVL Trigger: CAAGACACTCCAGGAAATCTCACTGCAGACTGCACAGAGGGACAAACAGAAGGCAGTTGTCTCACTACAGACCTCAATAAGGTAGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | AGGCATTCAGAAGCTCGTCATCTGAGTGTCCAATGGCATCTGGGTTaGAGAGCGGACCCAAGTATTTTAATTTCTTTGGGTGCTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RHSEARHLSVQWHLG*RADPSILISLGAVK Trigger: CTTCACAGCACCCAAAGAAATTAAAATACTTGGGTCCGCTCTCAAACCCAGATGCCATTGGACACTCAGATGACGAGCTTCTGAATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189776.2 |
||
| CDS CAA 72 bp | TCTGGGTTTGAGAGCGGACCCAAGTCTGCAAATAGATaGAACCAGGCTGACATGTCTTGGTTACCATTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGFESGPKSANR*NQADMSWLPLL Trigger: CAACAATGGTAACCAAGACATGTCAGCCTGGTTCAATCTATTTGCAGACTTGGGTCCGCTCTCAAACCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CAATGGCATCTGGGTTTGAGAGCGGACCCAAGTATTTTAATTTCTTaGGGTGCTGTGAAGGTACTGGCAAGGTATCTGAGTGTTCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QWHLGLRADPSILIS*GAVKVLARYLSVLI Trigger: GATCAGAACACTCAGATACCTTGCCAGTACCTTCACAGCACCCAAAGAAATTAAAATACTTGGGTCCGCTCTCAAACCCAGATGCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189776.2 |
||
| CDS TCA 72 bp | AGTTCTCCAGTAGTTCTTCTGCATTCTGCTCACTACTaGCTGGTTATCTTCTGCTCTGAGTTGCTCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSPVVLLHSAHY*LVIFCSELLRG Trigger: TCCTCTGAGCAACTCAGAGCAGAAGATAACCAGTCAGTAGTGAGCAGAATGCAGAAGAACTACTGGAGAACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS TCA 72 bp | ATCTTCACAAGTTCATTGCATGTCTCCTGGATGGAGTaGAAAACCTCCAACTTAGCGTCCAGTTCTGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: IFTSSLHVSWME*KTSNLASSSAS Trigger: CGATGCAGAACTGGACGCTAAGTTGGAGGTTTTTCACTCCATCCAGGAGACATGCAATGAACTTGTGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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| CDS CAA 90 bp | CTTTCAAATCTCTCTTCCTCTTCCTCTTCAGACAAAGCTACCTTATaGAGGTCTGTAGTGAGACAACTGCCTTCTGTTTGTCCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSNLSSSSSSDKATL*RSVVRQLPSVCPSV Trigger: CACAGAGGGACAAACAGAAGGCAGTTGTCTCACTACAGACCTCAATAAGGTAGCTTTGTCTGAAGAGGAAGAGGAAGAGAGATTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS CCA 72 bp | AAGTCTGCAAATAGATTGAACCAGGCTGACATGTCTTaGTTACCATTGTTGGGGGTGTTGAAAGCTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: KSANRLNQADMS*LPLLGVLKAPS Trigger: TGATGGAGCTTTCAACACCCCCAACAATGGTAACCAAGACATGTCAGCCTGGTTCAATCTATTTGCAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027172.13 ENSMUST00000191251.7 |
||
| CDS CAA 72 bp | CTCGTCCTCCTTCTTTCCCGTCGCTTTGATAAAGACTaGTTTAGTTCTCCAGTAGTTCTTCTGCATTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVLLLSRRFDKD*FSSPVVLLHSA Trigger: AGCAGAATGCAGAAGAACTACTGGAGAACTAAACAAGTCTTTATCAAAGCGACGGGAAAGAAGGAGGACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS CCA 72 bp | ATATTGCAGCGACTAGCTCCCAGCAAGTCCACTTTCTaGCAGACATCCTTCTTTAACTTGTCAAAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: ILQRLAPSKSTF*QTSFFNLSKES Trigger: AGATTCTTTTGACAAGTTAAAGAAGGATGTCTGCCAGAAAGTGGACTTGCTGGGAGCTAGTCGCTGCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS GCA 72 bp | TTAGCTGGTATTTCTCAACTATCTTCACAAGTTCATTaGATGTCTCCTGGATGGAGTGAAAAACCTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LAGISQLSSQVH*MSPGWSEKPPT Trigger: AGTTGGAGGTTTTTCACTCCATCCAGGAGACATGCAATGAACTTGTGAAGATAGTTGAGAAATACCAGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
||
| CDS CCA 72 bp | TCATTTTCTTCCTCTGATATAACGTTGAGTCTTAGCTaGTATTTCTCAACTATCTTCACAAGTTCATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFSSSDITLSLS*YFSTIFTSSLH Trigger: ATGCAATGAACTTGTGAAGATAGTTGAGAAATACCAGCTAAGACTCAACGTTATATCAGAGGAAGAAAATGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027172.13 ENSMUST00000189776.2 ENSMUST00000191251.7 |
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