Pregenerated sensors for ICA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062995Ensembl transcript IDs: ENSMUST00000038403.12, ENSMUST00000115518.8, ENSMUST00000115519.8, ENSMUST00000115520.8, ENSMUST00000126039.8, ENSMUST00000126430.2, ENSMUST00000151758.2, ENSMUST00000153390.8, ENSMUST00000156695.8
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGCGGAGTGGCCCGAGGGCTCCCTGTTGAAGGTTGCAGACTCATaGATTGAGCAATTCGTGTTCTTTATCAGTTTTCCCAACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: AAEWPEGSLLKVADS*IEQFVFFISFPNSI Trigger: GATGCTGTTGGGAAAACTGATAAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTCGGGCCACTCCGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTCAGGCTGGGGTCCCTGCCGTaGGACCCAGGCACGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SAEDLIQQQEVILVPTFRLGSLP*DPGTLP Trigger: AGGAAGCGTGCCTGGGTCCCACGGCAGGGACCCCAG...CCTGAAAGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCTCCCTGTTGAAGGTTGCAGACTCATGCATTGAGCAATTCGTGTTCTTTCAGCCCACTCTCTGCTaGACTCTCCCTCATCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EGSLLKVADSCIEQFVFFQPTLC*TLPHPG Trigger: GCCTGGATGAGGGAGAGTTCAGCAGAGAGTGGGCTG...AAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCTCCCTGTTGAAGGTTGCAGACTCATGCATTGAGCAATTCGTGTTCTTTGGTCAGCAAAGAGGCTaGACCAGGCAGTCAGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: EGSLLKVADSCIEQFVFFGQQRG*TRQSGP Trigger: CGGACCTGACTGCCTGGTTCAGCCTCTTTGCTGACC...AAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCCCCACTTTCAGGTTCTaGGGTCCCTGCCGTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSPTFRF*GPCRGT Trigger: GGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGG...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCTCCCTGTTGAAGGTTGCAGACTCATGCATTGAGCAATTCGTGTTCTTTAATCCGGAGCCTATCTaGGGCTTGGGGTCTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGSLLKVADSCIEQFVFFNPEPI*GLGSGS Trigger: AGAGCCAGACCCCAAGCCCCAGATAGGCTCCGGATT...AAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCTCCCTGTTGAAGGTTGCAGACTCATGCATTGAGCAATTCGTGTTCTTTCCAGGCAGGAAGTGCTaGAGATCTCATTCAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EGSLLKVADSCIEQFVFFPGRKC*RSHSTA Trigger: TGCTGTTGAATGAGATCTTCAGCACTTCCTGCCTGG...AAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCGCTGGCTCCTTTAGCTaGTCATCTCCAAACACTGCA | + |
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Preference number: 2 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSAGSFS*SSPNTA Trigger: TGCAGTGTTTGGAGATGACCAGCTAAAGGAGCCAGC...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGCATATTAGACTTCTaGAAGCCCTGGATGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SCREAWRSFIFWSKSCDGSILDF*KPWMRC Trigger: GCACCTCATCCAGGGCTTGCAGAAGTCTAATATGCT...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGTCATCTCCAAACACTaGAGCCCACTCTCTGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ILKQHTEHIRLLQALDEVVISKH*SPLSAE Trigger: TTCAGCAGAGAGTGGGCTGCAGTGTTTGGAGATGAC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGCATATTAGACTTCTaGAAGCCCTGGATGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSILDF*KPWMRC Trigger: GCACCTCATCCAGGGCTTGCAGAAGTCTAATATGCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGATAGAAACAGGGCCTTaGCCCTCTCATTTTATTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILKQHTEHIRLLQALDEVIETGP*PSHFIK Trigger: TTTAATAAAATGAGAGGGTCAAGGCCCTGTTTCTAT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| 3UTR CCA 72 bp | AACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTaGATGAGGTGCCGCGGAGTGGCCCGAGGGCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: NSTLSILDFCKP*MRCRGVARGLP Trigger: AGGGAGCCCTCGGGCCACTCCGCGGCACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| 3UTR CCA 72 bp | TCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTaGTCATCTCCAAACACTGCAGCCCACTCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SPWAPMGAGSFS*SSPNTAAHSLL Trigger: CAGCAGAGAGTGGGCTGCAGTGTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR TCA 72 bp | GATGAGGTGCCGCGGAGTGGCCCGAGGGCTCCCTGTTaGAGGTTGCAGACTCATGCATTGAGCAATTCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DEVPRSGPRAPC*RLQTHALSNSC Trigger: ACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTCGGGCCACTCCGCGGCACCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAGAGCCTATCTGGGGCTaGGGGTCTGGCTCTCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCREAWRSFIFWSKSCDGEPIWG*GSGSPW Trigger: CCAAGGAGAGCCAGACCCCAAGCCCCAGATAGGCTC...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| 3UTR GCA 72 bp | TGGCCCGAGGGCTCCCTGTTGAAGGTTGCAGACTCATaGATTGAGCAATTCGTGTTCTTTATCAGTTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: WPEGSLLKVADS*IEQFVFFISFP Trigger: GGGAAAACTGATAAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTCGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACAGAGGGCCTTGCCCGTaGCTTGCATCATTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNRGPCP*LASFFL Trigger: CAGGAAAAATGATGCAAGCCACGGGCAAGGCCCTCT...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACCTTGGCATCCAGGTCTaGATCAGAAGCAACCACATG | + |
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Preference number: 4 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNLGIQV*IRSNHM Trigger: CATGTGGTTGCTTCTGATGCAGACCTGGATGCCAAG...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR TCA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACTCTGGATCAAGTTCCTaGGACACATCCTTCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNSGSSS*DTSFIH Trigger: GTGGATGAAGGATGTGTCTCAGGAACTTGATCCAGA...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTCATCCTTGTCCCCACTTTCAGGTTCTGGGGTCCCTGCCGTGGGACCTATTCTGTCCTGTACTaGTCCATGCGGTTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: QEVILVPTFRFWGPCRGTYSVLY*SMRFTV Trigger: GACAGTGAACCGCATGGAGCAGTACAGGACAGAATA...GGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGGGACAAGGATGACCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCTGGGGTCCCTGCCGTaGGACCCAGGCACGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLGSLP*DPGTLS Trigger: GCTCAGCGTGCCTGGGTCCCACGGCAGGGACCCCAG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
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| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGGTTCTGGGGTCCCTaGCGTGGGACCCAGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRFWGP*RGTQAR Trigger: GCGTGCCTGGGTCCCACGGCAGGGACCCCAGAACCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCTGGGGTCCCTGCCGTaGGACCCAGGCACGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLGSLP*DPGTLP Trigger: AGGAAGCGTGCCTGGGTCCCACGGCAGGGACCCCAG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038403.12 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGGTCTGGCTCTCCTTaGGCCCCCATGGGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGSGSP*APMGAG Trigger: GCCAGCACCCATGGGGGCCCAAGGAGAGCCAGACCC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR TCA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACTATGTTGCTAGCATGTaGGATAAGAGGTTACATCTG | + |
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Preference number: 4 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNYVASM*DKRLHL Trigger: CAGATGTAACCTCTTATCTCACATGCTAGCAACATA...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACCAACTAGCTTCTTCATaGGGTCTTGTAAGCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNQLASS*GLVSSL Trigger: TAAAGAGCTTACAAGACCCCATGAAGAAGCTAGTTG...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCCCACTTTCAGGTTCTaGGGTCCCTGCCGTGGGACC | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVPTFRF*GPCRGT Trigger: GGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGTCCGAGGCAGCCTTaGCAGGCTCTTGCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGPRQP*QALAER Trigger: CCTCTCTGCAAGAGCCTGCCAAGGCTGCCTCGGACC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCAGCCCACTCTCTGCTaGACTCTCCCTCATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVQPTLC*TLPHPG Trigger: GCCTGGATGAGGGAGAGTTCAGCAGAGAGTGGGCTG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGTCAGCAAAGAGGCTaGACCAGGCAGTCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGQQRG*TRQSGP Trigger: CGGACCTGACTGCCTGGTTCAGCCTCTTTGCTGACC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | CAAGAGGTCATCCTTGTCCCCACTTTCAGGTTCTGGGGTCCCTGCCGTGGGACCCGTTGTGAATTCATATaGTTGATAACCTTTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: QEVILVPTFRFWGPCRGTRCEFI*LITFEA Trigger: AGCTTCAAAGGTTATCAACCATATGAATTCACAACG...GGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGGGACAAGGATGACCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCTCCTTGGGCCCCCATaGGTGCTGGCTCCTTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLLGPP*VLAPLA Trigger: AGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGCCTATCTGGGGCTTaGGGTCTGGCTCTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSLSGA*GLALLG Trigger: CCCAAGGAGAGCCAGACCCCAAGCCCCAGATAGGCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGGACCCAGGCACGCTaGGCATGTGTCATGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGTQAR*ACVMYR Trigger: TCTGTACATGACACATGCTCAGCGTGCCTGGGTCCC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
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| CDS-3UTR GCA 90 bp | CCAGTAGCAGAGACCTTCAGAAATCCCGAGTCCTTTCAAAGCCCACATCAATTAAGGCGGACTTGTGTCTaGACCTTCCTGAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVAETFRNPESFQSPHQLRRTCV*TFLNFS Trigger: GGAGAAGTTCAGGAAGGTGCAGACACAAGTCCGCCT...TAATTGATGTGGGCTTTGAAAGGACTCGGGATTTCTGAAGGTCTCTGCTACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
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| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGCCTTGGCAGGCTCTTaGAGAGAGGCCTGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVALAGS*REAWRS Trigger: AGATCTCCAGGCCTCTCTGCAAGAGCCTGCCAAGGC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAATCCGGAGCCTATCTaGGGCTTGGGGTCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVNPEPI*GLGSGS Trigger: AGAGCCAGACCCCAAGCCCCAGATAGGCTCCGGATT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS-3UTR CCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCACTTGACTCCTCTGTaGCTGTCGCCTGCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETHLTPL*LSPALD Trigger: ATCCAGGGCAGGCGACAGCCACAGAGGAGTCAAGTG...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR TCA 90 bp | AGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTCAGGACAACTGACTTATCTTaGGCAAACCGGTCCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SAEDLIQQQEVILVPTFRTTDLS*ANRSCN Trigger: GTTGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGT...CCTGAAAGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR TCA 90 bp | GCAGGAAGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTGTCTTGGAAGCCTTaGGATCGAAGAAACTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AGSAEDLIQQQEVILVPTLSWKP*DRRNFP Trigger: GGGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAA...AGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACTTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR TCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGCAGGGAAAAGCCACTTaGCTCCTCTGTGGCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAEQGKAT*LLCGCR Trigger: GCGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCTG...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR GCA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCAAAAGCAGAGGGCCTTaGCCGTGGCTTGCATCATTT | + |
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Preference number: 4 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSKSRGP*PWLASF Trigger: AAATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTT...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR GCA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGCGGACTTGTGTCTaGACCTTCCTGAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SCREAWRSFIFWSKSCDGRRTCV*TFLNFS Trigger: GGAGAAGTTCAGGAAGGTGCAGACACAAGTCCGCCT...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGGCGGACTTGTGTCTaGACCTTCCTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRRTCV*TFLNFS Trigger: GGAGAAGTTCAGGAAGGTGCAGACACAAGTCCGCCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCAGGCGGACTTGTGTCTaGACCTTCCTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETRRTCV*TFLNFS Trigger: GGAGAAGTTCAGGAAGGTGCAGACACAAGTCCGCCT...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGAGGGCCTTGCCCGTaGCTTGCATCATTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRGPCP*LASFFL Trigger: CAGGAAAAATGATGCAAGCCACGGGCAAGGCCCTCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGTTCTCTGGATTGAGTaGAACAGCTCCAGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVVLWIE*NSSSLA Trigger: TGCCAAGCTGGAGCTGTTTCACTCAATCCAGAGAAC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTGTTCTCTGGATTGAGTaGAACAGCTCCAGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCYKGATSYKLHTSSRDPVLWIE*NSSSLA Trigger: TGCCAAGCTGGAGCTGTTTCACTCAATCCAGAGAAC...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTCAGGATGGTTGATAACCTTTaGAGCTCTCATGAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAEDLIQQQEVILVPTFRMVDNL*SSHEWL Trigger: CAGCCATTCATGAGAGCTTCAAAGGTTATCAACCAT...CCTGAAAGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCCAGGCAGGAAGTGCTaGAGATCTCATTCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVPGRKC*RSHSTA Trigger: TGCTGTTGAATGAGATCTTCAGCACTTCCTGCCTGG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCTTGGCATCCAGGTCTaGATCAGAAGCAACCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLGIQV*IRSNHM Trigger: CATGTGGTTGCTTCTGATGCAGACCTGGATGCCAAG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAAAAGCAGAGGGCCTTaGCCGTGGCTTGCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVKSRGP*PWLASF Trigger: AAATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCCTTAAAAGCAGAGGGCCTTaGCCGTGGCTTGCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KGATSYKLHTSSRDPNILKSRGP*PWLASF Trigger: AAATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTT...AAGGATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCGAGGTTACATCTGCTTaGTCCAAGAAGATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSEVTSA*SKKIHL Trigger: AAGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTC...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGAGAGGGCCTTGCCCGTaGCTTGCATCATTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAERGPCP*LASFFL Trigger: CAGGAAAAATGATGCAAGCCACGGGCAAGGCCCTCT...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCAAAAGTGGAGCAGAGTaGTCTGGTATGTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSKSGAE*SGMLLA Trigger: TGCTAGCAACATACCAGACCACTCTGCTCCACTTTT...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGCTGGCTCCTTTAGCTaGTCATCTCCAAACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVAGSFS*SSPNTA Trigger: TGCAGTGTTTGGAGATGACCAGCTAAAGGAGCCAGC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGACAACTGACTTATCTTaGGCAAACCGGTCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVTTDLS*ANRSCN Trigger: GTTGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCACAACTGACTTATCTTaGGCAAACCGGTCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETTTDLS*ANRSCN Trigger: GTTGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGT...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTCTGGATCAAGTTCCTaGGACACATCCTTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSGSSS*DTSFIH Trigger: GTGGATGAAGGATGTGTCTCAGGAACTTGATCCAGA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTCTGGATCAAGTTCCTaGGACACATCCTTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETSGSSS*DTSFIH Trigger: GTGGATGAAGGATGTGTCTCAGGAACTTGATCCAGA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGCTTGGCATCCAGGTCTaGATCAGAAGCAACCACATG | + |
|
Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAELGIQV*IRSNHM Trigger: CATGTGGTTGCTTCTGATGCAGACCTGGATGCCAAG...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTATTCTGTCCTGTACTaGTCCATGCGGTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVYSVLY*SMRFTV Trigger: GACAGTGAACCGCATGGAGCAGTACAGGACAGAATA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTCCCTGTTGAAGGTTGCAGACTCATGCATTGAGCAATTCGTGTTCTTTATAAGAGGTTACATCTaGTTGCTCCAAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSLLKVADSCIEQFVFFIRGYI*LLQEDP Trigger: TGGATCTTCTTGGAGCAAGCAGATGTAACCTCTTAT...AAAGAACACGAATTGCTCAATGCATGAGTCTGCAACCTTCAACAGGGAGCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTCCAAAGAAATTAACTaGCTCGGCTCTGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSKEIN*LGSGAT Trigger: TGTGGCACCAGAGCCGAGGCAGTTAATTTCTTTGGA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTGTCTTGGAAGCCTTaGGATCGAAGAAACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLSWKP*DRRNFP Trigger: GGGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACTCTGGATCAAGTTCCTaGGACACATCCTTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDSGSSS*DTSFIH Trigger: GTGGATGAAGGATGTGTCTCAGGAACTTGATCCAGA...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGAAGATCCACCTTTTaGCACACATCCATCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCREAWRSFIFWSKSCDGRRSTF*HTSIFN Trigger: GTTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCT...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTCATCTATGGGTCCTaGGCATGTGTCATGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVFIYGS*ACVMYR Trigger: TCTGTACATGACACATGCTCAGGACCCATAGATGAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038403.12 ENSMUST00000115520.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGTATTCTGTCCTGTACTaGTCCATGCGGTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAEYSVLY*SMRFTV Trigger: GACAGTGAACCGCATGGAGCAGTACAGGACAGAATA...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGAGGTTACATCTGCTTaGTCCAAGAAGATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVEVTSA*SKKIHL Trigger: AAGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCCTTGAGGTTACATCTGCTTaGTCCAAGAAGATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGATSYKLHTSSRDPNILEVTSA*SKKIHL Trigger: AAGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTC...AAGGATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTCGAGGTTACATCTGCTTaGTCCAAGAAGATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVIKEQLLTNCTPVAETFEVTSA*SKKIHL Trigger: AAGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTC...GAAGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTGCTTGTAGAGGTCTaGATCAAGTTCCTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLLVEV*IKFLRH Trigger: GTGTCTCAGGAACTTGATCCAGACCTCTACAAGCAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTGCTTGTAGAGGTCTaGATCAAGTTCCTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETLLVEV*IKFLRH Trigger: GTGTCTCAGGAACTTGATCCAGACCTCTACAAGCAA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAAAAGTGGAGCAGAGTaGTCTGGTATGTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVKSGAE*SGMLLA Trigger: TGCTAGCAACATACCAGACCACTCTGCTCCACTTTT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGTTGTCTTGGAAGCCTTaGGATCGAAGAAACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAELSWKP*DRRNFP Trigger: GGGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAA...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGAAGATCCACCTTTTaGCACACATCCATCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRRSTF*HTSIFN Trigger: GTTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGATGGTTGATAACCTTTaGAGCTCTCATGAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVMVDNL*SSHEWL Trigger: CAGCCATTCATGAGAGCTTCAAAGGTTATCAACCAT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTATGGTTGATAACCTTTaGAGCTCTCATGAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCYKGATSYKLHTSSRDPMVDNL*SSHEWL Trigger: CAGCCATTCATGAGAGCTTCAAAGGTTATCAACCAT...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCAAATGGAACTGTAGCTaGTCCAGGGAAAAGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YKGATSYKLHTSSRDPNIKWNCS*SREKPL Trigger: AAGTGGCTTTTCCCTGGATCAGCTACAGTTCCATTT...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACAGAAGGAATGGCAGTTaGTGCAAATGGAACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDRRNGS*CKWNCS Trigger: GCTACAGTTCCATTTGCATCAACTGCCATTCCTTCT...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCAAAAGTGGAGCAGAGTaGTCTGGTATGTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKGATSYKLHTSSRDPNIKSGAE*SGMLLA Trigger: TGCTAGCAACATACCAGACCACTCTGCTCCACTTTT...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTCAGAAAAAAAGTGGAGCAGAGTaGTCTGGTATGTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKGATSYKLHTSSRDLQKKSGAE*SGMLLA Trigger: TGCTAGCAACATACCAGACCACTCTGCTCCACTTTT...TTTCTGAAGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTCTTGCAGAGAGGCCTaGAGATCTTTCATATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSCREA*RSFIFW Trigger: CCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCATCTTATTGACAACTaGCTTATCTTGAGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVHLIDN*LILSKP Trigger: CGGTTTGCTCAAGATAAGTCAGTTGTCAATAAGATG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACAGAAGATCCACCTTTTaGCACACATCCATCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDRRSTF*HTSIFN Trigger: GTTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCT...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTATGTTGCTAGCATGTaGGATAAGAGGTTACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVYVASM*DKRLHL Trigger: CAGATGTAACCTCTTATCTCACATGCTAGCAACATA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTTATGTTGCTAGCATGTaGGATAAGAGGTTACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCYKGATSYKLHTSSRDPYVASM*DKRLHL Trigger: CAGATGTAACCTCTTATCTCACATGCTAGCAACATA...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTATGTTGCTAGCATGTaGGATAAGAGGTTACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETYVASM*DKRLHL Trigger: CAGATGTAACCTCTTATCTCACATGCTAGCAACATA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACATGGTTGATAACCTTTaGAGCTCTCATGAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDMVDNL*SSHEWL Trigger: CAGCCATTCATGAGAGCTTCAAAGGTTATCAACCAT...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGTCTTATAAGCAGATaGATCTTTGTGCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVSLISR*IFVLIL Trigger: GAGGATGAGCACAAAGATTCATCTGCTTATAAGACT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTGCATCATTTTTCCTaGTCGGGTTTTGTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLHHFS*SGFVLE Trigger: TTCCAAGACAAAACCCGAGCAGGAAAAATGATGCAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGATAAGAGGTTACATCTaGTTGCTCCAAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVIRGYI*LLQEDP Trigger: TGGATCTTCTTGGAGCAAGCAGATGTAACCTCTTAT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCAACTAGCTTCTTCATaGGGTCTTGTAAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVQLASS*GLVSSL Trigger: TAAAGAGCTTACAAGACCCCATGAAGAAGCTAGTTG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCTAATAGTTCATCTATaGGTCCTGAGCATGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVLIVHL*VLSMCH Trigger: ATGACACATGCTCAGGACCCATAGATGAACTATTAG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038403.12 ENSMUST00000115520.8 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCCGGATAGAGAAGGAATaGCAGTTGATGCAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKGATSYKLHTSSRDPNIRIEKE*QLMQME Trigger: TTCCATTTGCATCAACTGCCATTCCTTCTCTATCCG...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR TCA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCCATCTTATTGACAACTaGCTTATCTTGAGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: YKGATSYKLHTSSRDPNIHLIDN*LILSKP Trigger: CGGTTTGCTCAAGATAAGTCAGTTGTCAATAAGATG...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACTTGCATCATTTTTCCTaGTCGGGTTTTGTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDLHHFS*SGFVLE Trigger: TTCCAAGACAAAACCCGAGCAGGAAAAATGATGCAA...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACATAAGAGGTTACATCTaGTTGCTCCAAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCCYKGATSYKLHTSSRDIRGYI*LLQEDP Trigger: TGGATCTTCTTGGAGCAAGCAGATGTAACCTCTTAT...GTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGATAAGAGGTTACATCTaGTTGCTCCAAGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVVVIKEQLLTNCTPVAEIRGYI*LLQEDP Trigger: TGGATCTTCTTGGAGCAAGCAGATGTAACCTCTTAT...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGCAGATGAATCTTTGTaGTCATCCTCCAAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVADESL*SSSKEI Trigger: AATTTCTTTGGAGGATGAGCACAAAGATTCATCTGC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCGTTGTGAATTCATATaGTTGATAACCTTTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRCEFI*LITFEA Trigger: AGCTTCAAAGGTTATCAACCATATGAATTCACAACG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCGTTGTGAATTCATATaGTTGATAACCTTTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVVIKEQLLTNCTPVAETRCEFI*LITFEA Trigger: AGCTTCAAAGGTTATCAACCATATGAATTCACAACG...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGATCTTTCATATTTTaGTCTAAAAGCTGTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRSFIF*SKSCDG Trigger: TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTCGTTGTGAATTCATATaGTTGATAACCTTTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCYKGATSYKLHTSSRDLRCEFI*LITFEA Trigger: AGCTTCAAAGGTTATCAACCATATGAATTCACAACG...AAGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGTCATCCTTGTCCCCACTTTCAGGTTCTGGGGTCCCTGCCGTGGGACCGAAAAGCAGAGGGCCTaGCCCGTGGCTTGCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: QEVILVPTFRFWGPCRGTEKQRA*PVACII Trigger: AATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTTC...GGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGGGACAAGGATGACCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCCTTGGGCCCCCATGGGTGCTGGCTCCTTTAGCTGGTCATCTCCAAACTTCTTCCCCGTGGCTTaGATAAAGGCCTGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPWAPMGAGSFSWSSPNFFPVA*IKACLV Trigger: GACCAAGCAGGCCTTTATCAAAGCCACGGGGAAGAA...GTTTGGAGATGACCAGCTAAAGGAGCCAGCACCCATGGGGGCCCAAGGAGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS CCA 90 bp | AGAGGTCATCCTTGTCCCCACTTTCAGGTTCTGGGGTCCCTGCCGTaGGACCCAGGCACGCTGAGCATGTGTCATGTACAGAACCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGHPCPHFQVLGSLP*DPGTLSMCHVQNLC Trigger: ACAAAGGTTCTGTACATGACACATGCTCAGCGTGCCTGGGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGGGACAAGGATGACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
||
| CDS TCA 90 bp | CCCACTTTCAGGTTCTGGGGTCCCTGCCGTGGGACCCAGGCACGCTaGGCATGTGTCATGTACAGAACCTTTGTCTACGGAAGACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTFRFWGPCRGTQAR*ACVMYRTFVYGRQN Trigger: GTTTTGTCTTCCGTAGACAAAGGTTCTGTACATGACACATGCTCAGCGTGCCTGGGTCCCACGGCAGGGACCCCAGAACCTGAAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGGGTCTGGCTCTCCTaGGGCCCCCATGGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGVWLS*GPHGCW Trigger: CCAGCACCCATGGGGGCCCAAGGAGAGCCAGACCCC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTCAGGGGCCTTGCCCGTGGCTaGCATCATTTTTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SAEDLIQQQEVILVPTFRGLARG*HHFSCS Trigger: CGAGCAGGAAAAATGATGCAAGCCACGGGCAAGGCC...CCTGAAAGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGAGCCTATCTGGGGCTaGGGGTCTGGCTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVEPIWG*GSGSPW Trigger: CCAAGGAGAGCCAGACCCCAAGCCCCAGATAGGCTC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGGTCCGAGGCAGCCTaGGCAGGCTCTTGCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRSEAA*AGSCRE Trigger: CTCTCTGCAAGAGCCTGCCAAGGCTGCCTCGGACCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGCCTTGCCCGTGGCTaGCATCATTTTTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGLARG*HHFSCS Trigger: CGAGCAGGAAAAATGATGCAAGCCACGGGCAAGGCC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTGGCCTTGCCCGTGGCTaGCATCATTTTTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CCYKGATSYKLHTSSRDPGLARG*HHFSCS Trigger: CGAGCAGGAAAAATGATGCAAGCCACGGGCAAGGCC...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTCCAGGGAAAAGCCACTaGACTCCTCTGTGGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CCYKGATSYKLHTSSRDPPGKSH*TPLWLS Trigger: CGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCTGG...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCTGCTCGGGTTTTGTCTaGGAAGCCTTGAGATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSCSGFV*EALRSK Trigger: CTTCGATCTCAAGGCTTCCAAGACAAAACCCGAGCA...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGAAAAGCAGAGGGCCTaGCCCGTGGCTTGCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVEKQRA*PVACII Trigger: AATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTTC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTGAAAAGCAGAGGGCCTaGCCCGTGGCTTGCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: CCYKGATSYKLHTSSRDPEKQRA*PVACII Trigger: AATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTTC...AGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS TCA 90 bp | GGCCTGCTTGGTCTCCCAATATTTCTGCTGCATCTTATTGACAACTaGCTTATCTTGAGCAAACCGGTCCTGCAACTCCCAGGAATAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLLGLPIFLLHLIDN*LILSKPVLQLPGIT Trigger: TGTTATTCCTGGGAGTTGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGTCAATAAGATGCAGCAGAAATATTGGGAGACCAAGCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000126039.8 ENSMUST00000151758.2 ENSMUST00000153390.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTCTTCCCCGTGGCTTaGATAAAGGCCTGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVFFPVA*IKACLV Trigger: GACCAAGCAGGCCTTTATCAAAGCCACGGGGAAGAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTCTTCCCCGTGGCTTaGATAAAGGCCTGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVVIKEQLLTNCTPVAETFFPVA*IKACLV Trigger: GACCAAGCAGGCCTTTATCAAAGCCACGGGGAAGAA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGGGCAGGTTCTCTGGATaGAGTGAAACAGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVGRFSG*SETAPA Trigger: AGCTGGAGCTGTTTCACTCAATCCAGAGAACCTGCC...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGTAGCAGAGACCTTCAGAAATCCCGAGTCCTTTCAAAGCCCACATCAATTAGAGGTTACATCTGCTaGCTCCAAGAAGATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSRDLQKSRVLSKPTSIRGYIC*LQEDPP Trigger: AGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTCT...AATTGATGTGGGCTTTGAAAGGACTCGGGATTTCTGAAGGTCTCTGCTACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAGGAATCCGGAGCAGAGGTTACATCTGCTaGCTCCAAGAAGATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGDLSYFGLKAVTEGIRSRGYIC*LQEDPP Trigger: AGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTCT...GCTCCGGATTCCTTCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGCAACAGCATCAGGGTTaGATAAGGGGTCGAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVQQHQG*IRGRGQ Trigger: CTGACCTCGACCCCTTATCAAACCCTGATGCTGTTG...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGGGCAGGTTCTCTGGATaGAGTGAAACAGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVVVIKEQLLTNCTPVAEGRFSG*SETAPA Trigger: AGCTGGAGCTGTTTCACTCAATCCAGAGAACCTGCC...CTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTGCTCGGGTTTTGTCTaGGAAGCCTTGAGATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVCSGFV*EALRSK Trigger: CTTCGATCTCAAGGCTTCCAAGACAAAACCCGAGCA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | AAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCCTTTGCTCGGGTTTTGTCTaGGAAGCCTTGAGATCGAAG | + |
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Preference number: 5 (lower is better) Translates to: KGATSYKLHTSSRDPNILCSGFV*EALRSK Trigger: CTTCGATCTCAAGGCTTCCAAGACAAAACCCGAGCA...AAGGATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAGAGGTTACATCTGCTaGCTCCAAGAAGATCCACCT | + |
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Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVRGYIC*LQEDPP Trigger: AGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTCT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGATTTGTCTTGGAAGCCTaGAGATCGAAGAAACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SCREAWRSFIFWSKSCDGFVLEA*RSKKLS Trigger: GGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAAA...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | AGTGCTGAAGATCTCATTCAACAGCAAGAGGTCATCCTTGTCCCCACTTTCAGGAAAAGTTTCTACTTCTaGGTGAAATCGACACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: SAEDLIQQQEVILVPTFRKSFYF*VKSTQR Trigger: CCTTTGTGTCGATTTCACCAAGAAGTAGAAACTTTT...CCTGAAAGTGGGGACAAGGATGACCTCTTGCTGTTGAATGAGATCTTCAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | ACCAGTAGCAGAGACCTTCAGAAATCCCGAGTCCTTTCAAAGCCCACATCAATTAAGAAGATCCACCTTTaGACACACATCCATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: TSSRDLQKSRVLSKPTSIKKIHL*THIHLQ Trigger: TTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCTT...AATTGATGTGGGCTTTGAAAGGACTCGGGATTTCTGAAGGTCTCTGCTACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126430.2 |
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| CDS-3UTR CAA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCAGAGGTTACATCTGCTaGCTCCAAGAAGATCCACCT | + |
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Preference number: 5 (lower is better) Translates to: YKGATSYKLHTSSRDPNIRGYIC*LQEDPP Trigger: AGGTGGATCTTCTTGGAGCAAGCAGATGTAACCTCT...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTTTGTCTTGGAAGCCTaGAGATCGAAGAAACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVFVLEA*RSKKLS Trigger: GGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAAA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTTTGTCTTGGAAGCCTaGAGATCGAAGAAACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VVVIKEQLLTNCTPVAETFVLEA*RSKKLS Trigger: GGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAAA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR CAA 90 bp | TCTTGCAGAGAGGCCTGGAGATCTTTCATATTTTGGTCTAAAAGCTGTGACGGAAAGAAGATCCACCTTTaGACACACATCCATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SCREAWRSFIFWSKSCDGKKIHL*THIHLQ Trigger: TTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCTT...TCCGTCACAGCTTTTAGACCAAAATATGAAAGATCTCCAGGCCTCTCTGCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAAGAAGATCCACCTTTaGACACACATCCATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVKKIHL*THIHLQ Trigger: TTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCTT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGAAAAGTTTCTACTTCTaGGTGAAATCGACACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVKSFYF*VKSTQR Trigger: CCTTTGTGTCGATTTCACCAAGAAGTAGAAACTTTT...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCAAAAGTTTCTACTTCTaGGTGAAATCGACACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: VVVIKEQLLTNCTPVAETKSFYF*VKSTQR Trigger: CCTTTGTGTCGATTTCACCAAGAAGTAGAAACTTTT...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR CAA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCAAGAAGATCCACCTTTaGACACACATCCATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: YKGATSYKLHTSSRDPNIKKIHL*THIHLQ Trigger: TTGAAGATGGATGTGTGTCAAAAGGTGGATCTTCTT...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAAACAGCACACTGAGCATATTAGACTTCTGCAAGCCCTGGATGAGGTGTGTGAATTCATATGGTaGATAACCTTTGAAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ILKQHTEHIRLLQALDEVCEFIW*ITFEAL Trigger: GAGAGCTTCAAAGGTTATCAACCATATGAATTCACA...CACCTCATCCAGGGCTTGCAGAAGTCTAATATGCTCAGTGTGCTGTTTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000156695.8 |
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| CDS-3UTR CAA 90 bp | GTTGTTGTTATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCTGTGAATTCATATGGTaGATAACCTTTGAAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VVVIKEQLLTNCTPVAETCEFIW*ITFEAL Trigger: GAGAGCTTCAAAGGTTATCAACCATATGAATTCACA...GGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATAACAACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115518.8 ENSMUST00000126430.2 |
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| CDS-3UTR CAA 90 bp | TATAAAGGAGCAACTTCTTACAAACTGCACACCAGTAGCAGAGACCCTAATATCTGTGAATTCATATGGTaGATAACCTTTGAAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: YKGATSYKLHTSSRDPNICEFIW*ITFEAL Trigger: GAGAGCTTCAAAGGTTATCAACCATATGAATTCACA...GATATTAGGGTCTCTGCTACTGGTGTGCAGTTTGTAAGAAGTTGCTCCTTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS TCA 72 bp | AGGTTCTGGGGTCCCTGCCGTGGGACCCAGGCACGCTaGGCATGTGTCATGTACAGAACCTTTGTCTACGGA | + |
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Preference number: 6 (lower is better) Translates to: RFWGPCRGTQAR*ACVMYRTFVYG Trigger: TCCGTAGACAAAGGTTCTGTACATGACACATGCTCAGCGTGCCTGGGTCCCACGGCAGGGACCCCAGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
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| CDS GCA 72 bp | AGGCCAACCTTTGCTGGGAGGAAAAGCAGAGGGCCTTaGCCGTGGCTTGCATCATTTTTCCTGCTCGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RPTFAGRKSRGP*PWLASFFLLGF Trigger: AAACCCGAGCAGGAAAAATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTTCCTCCCAGCAAAGGTTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CCA 72 bp | GTAGCTGATCCAGGGAAAAGCCACTTGACTCCTCTGTaGCTGTCGCCTGCCCTGGATCCATGGAGAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VADPGKSHLTPL*LSPALDPWRSV Trigger: TACACTTCTCCATGGATCCAGGGCAGGCGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCTGGATCAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS CAA 72 bp | AAGGCCAACCTTTGCTGGGAGGAAAAGCAGAGGGCCTaGCCCGTGGCTTGCATCATTTTTCCTGCTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: KANLCWEEKQRA*PVACIIFPARV Trigger: AACCCGAGCAGGAAAAATGATGCAAGCCACGGGCAAGGCCCTCTGCTTTTCCTCCCAGCAAAGGTTGGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CAA 90 bp | GCAGTTGATGCAAATGGAACTGTAGCTGATCCAGGGAAAAGCCACTaGACTCCTCTGTGGCTGTCGCCTGCCCTGGATCCATGGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AVDANGTVADPGKSH*TPLWLSPALDPWRS Trigger: ACTTCTCCATGGATCCAGGGCAGGCGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCTGGATCAGCTACAGTTCCATTTGCATCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS TCA 72 bp | GATTGCTTTAGACAAGTCCAGGCAGGTTCTCTGGATTaGGTGAAACAGCTCCAGCTTGGCATCCAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: DCFRQVQAGSLD*VKQLQLGIQVC Trigger: GCAGACCTGGATGCCAAGCTGGAGCTGTTTCACTCAATCCAGAGAACCTGCCTGGACTTGTCTAAAGCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS GCA 72 bp | GATGAATCTTTGTGCTCATCCTCCAAAGAAATTAACTaGCTCGGCTCTGGTGCCACAGCCTCCCGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: DESLCSSSKEIN*LGSGATASRFS Trigger: GGAAAACCGGGAGGCTGTGGCACCAGAGCCGAGGCAGTTAATTTCTTTGGAGGATGAGCACAAAGATTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS GCA 72 bp | AGGGAAAAGCCACTTGACTCCTCTGTGGCTGTCGCCTaGCCTGGATCCATGGAGAAGTGTATAAGTGATATC | + |
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Preference number: 6 (lower is better) Translates to: REKPLDSSVAVA*PGSMEKCISDI Trigger: GATATCACTTATACACTTCTCCATGGATCCAGGGCAGGCGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115518.8 |
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| CDS CAA 72 bp | CCCAGGCACGCTGAGCATGTGTCATGTACAGAACCTTaGTCTACGGAAGACAAAACGCTTGTTCCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PRHAEHVSCTEP*STEDKTLVPSS Trigger: TGAAGAGGGAACAAGCGTTTTGTCTTCCGTAGACAAAGGTTCTGTACATGACACATGCTCAGCGTGCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115519.8 |
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| CDS CAA 90 bp | GCATCAGAAGCAACCACATGTTCATCTTCCTTCTTCCCCGTGGCTTaGATAAAGGCCTGCTTGGTCTCCCAATATTTCTGCTGCATCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASEATTCSSSFFPVA*IKACLVSQYFCCIL Trigger: TAAGATGCAGCAGAAATATTGGGAGACCAAGCAGGCCTTTATCAAAGCCACGGGGAAGAAGGAAGATGAACATGTGGTTGCTTCTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000126039.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CAA 90 bp | CAGCCAGGTATCAGAGATGGCCCGATGTCTAAAAGTTTCTACTTCTaGGTGAAATCGACACAAAGGGTTTCTCAAGGCCAACCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QPGIRDGPMSKSFYF*VKSTQRVSQGQPLL Trigger: CAGCAAAGGTTGGCCTTGAGAAACCCTTTGTGTCGATTTCACCAAGAAGTAGAAACTTTTAGACATCGGGCCATCTCTGATACCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CAA 72 bp | CGTGGCTTGCATCATTTTTCCTGCTCGGGTTTTGTCTaGGAAGCCTTGAGATCGAAGAAACTTTCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RGLHHFSCSGFV*EALRSKKLSQF Trigger: GAACTGGGAAAGTTTCTTCGATCTCAAGGCTTCCAAGACAAAACCCGAGCAGGAAAAATGATGCAAGCCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS TCA 72 bp | GGTCTCCCAATATTTCTGCTGCATCTTATTGACAACTaGCTTATCTTGAGCAAACCGGTCCTGCAACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPIFLLHLIDN*LILSKPVLQLP Trigger: TGGGAGTTGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGTCAATAAGATGCAGCAGAAATATTGGGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000126039.8 ENSMUST00000151758.2 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS TCA 72 bp | CCTGCTTGGTCTCCCAATATTTCTGCTGCATCTTATTaGCAACTGACTTATCTTGAGCAAACCGGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PAWSPNISAASY*QLTYLEQTGPA Trigger: TGCAGGACCGGTTTGCTCAAGATAAGTCAGTTGTCAATAAGATGCAGCAGAAATATTGGGAGACCAAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000126039.8 ENSMUST00000151758.2 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CAA 72 bp | TCTATGGGTCCTGAGCATGTGTCATGTACAGAACCTTaGTCTACGGAAGACAAAACGCTTGTTCCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SMGPEHVSCTEP*STEDKTLVPSS Trigger: TGAAGAGGGAACAAGCGTTTTGTCTTCCGTAGACAAAGGTTCTGTACATGACACATGCTCAGGACCCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038403.12 ENSMUST00000115520.8 |
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| CDS CAA 72 bp | ATCAGAGATGGCCCGATGTCTAAAAGTTTCTACTTCTaGGTGAAATCGACACAAAGGGTTTCTCAAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IRDGPMSKSFYF*VKSTQRVSQGQ Trigger: TTGGCCTTGAGAAACCCTTTGTGTCGATTTCACCAAGAAGTAGAAACTTTTAGACATCGGGCCATCTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038403.12 ENSMUST00000115518.8 ENSMUST00000115519.8 ENSMUST00000115520.8 ENSMUST00000153390.8 ENSMUST00000156695.8 |
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| CDS CAA 90 bp | AGCATGTGTCATGTACAGAACCTTTGTCTACGGAAGACAAAACGCTaGTTCCCTCTTCAGTCTTATAAGCAGATGAATCTTTGTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SMCHVQNLCLRKTKR*FPLQSYKQMNLCAH Trigger: ATGAGCACAAAGATTCATCTGCTTATAAGACTGAAGAGGGAACAAGCGTTTTGTCTTCCGTAGACAAAGGTTCTGTACATGACACATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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| CDS CAA 72 bp | CATGTACAGAACCTTTGTCTACGGAAGACAAAACGCTaGTTCCCTCTTCAGTCTTATAAGCAGATGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: HVQNLCLRKTKR*FPLQSYKQMNL Trigger: AAGATTCATCTGCTTATAAGACTGAAGAGGGAACAAGCGTTTTGTCTTCCGTAGACAAAGGTTCTGTACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038403.12 ENSMUST00000115519.8 ENSMUST00000115520.8 |
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