Pregenerated sensors for IBA57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049287Ensembl transcript IDs: ENSMUST00000054523.6, ENSMUST00000069631.3, ENSMUST00000137433.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGGAACCCCAACATCCAACGCAACCGCAGTATTGCTCCTGAGTaGGCAGGCAGGCAGAGGCAAAACAGCCACGGAGACAAGGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SWNPNIQRNRSIAPE*AGRQRQNSHGDKAV Trigger: GACAGCCTTGTCTCCGTGGCTGTTTTGCCTCTGCCTGCCTGCCCACTCAGGAGCAATACTGCGGTTGCGTTGGATGTTGGGGTTCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | CCTGCCTTTAGATGCCCTTTCTCTGCTTCCTGGTGCCTTACCATGTaGGGGGCTCAGCCACACTCCCACTGCCATGAACCCCCTGAAATC | + |
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Preference number: 1 (lower is better) Translates to: PAFRCPFSASWCLTM*GAQPHSHCHEPPEI Trigger: GATTTCAGGGGGTTCATGGCAGTGGGAGTGTGGCTGAGCCCCTCACATGGTAAGGCACCAGGAAGCAGAGAAAGGGCATCTAAAGGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | GGCCCAGAAGCACCAACCTCTGTGTGGGCACGCCCCCATCAGGTTTaGGAGGGCAAAAGCCAGTCACATGACTGCAACCCTAAAGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GPEAPTSVWARPHQV*EGKSQSHDCNPKVS Trigger: GCTTACTTTAGGGTTGCAGTCATGTGACTGGCTTTTGCCCTCTCAAACCTGATGGGGGCGTGCCCACACAGAGGTTGGTGCTTCTGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | TGTTCAAGCCCCCAACACTGGAAGAGCCCAACAGCAGGCAATGGGTaGCTCACAAAGCGGGTCTTCTGCCCAAAGCAGCATCCTGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CSSPQHWKSPTAGNG*LTKRVFCPKQHPAS Trigger: AGAGGCAGGATGCTGCTTTGGGCAGAAGACCCGCTTTGTGAGTCACCCATTGCCTGCTGTTGGGCTCTTCCAGTGTTGGGGGCTTGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR GCA 90 bp | AAGCTGCCTGGAACCCTTAGAGGTTCCTCTGTCAATCTAAAAGGCTaGCAGGTGGGGTTGGCAGGAGCCCATCAGTCACAGCCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: KLPGTLRGSSVNLKG*QVGLAGAHQSQPSR Trigger: TCTGGAAGGCTGTGACTGATGGGCTCCTGCCAACCCCACCTGGCAGCCTTTTAGATTGACAGAGGAACCTCTAAGGGTTCCAGGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CCA 90 bp | AGGCTCTCTGTAGGAAGCATGAGCCGATCTGTAGCCTGGAACCCATaGAACTTTCCTAGAGGATGTGCTCCAGAAGGCACCACGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: RLSVGSMSRSVAWNP*NFPRGCAPEGTTGG Trigger: TCCTCCCGTGGTGCCTTCTGGAGCACATCCTCTAGGAAAGTTCCATGGGTTCCAGGCTACAGATCGGCTCATGCTTCCTACAGAGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | AACCTCCCGACCCTGCACACAACCTATACAATCTCTGCCCTGAGATaGGTTTCAAGAGAACACGAAGCCAGGCCCAGCAACTCTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: NLPTLHTTYTISALR*VSREHEARPSNSAG Trigger: GCCTGCAGAGTTGCTGGGCCTGGCTTCGTGTTCTCTTGAAACTCATCTCAGGGCAGAGATTGTATAGGTTGTGTGCAGGGTCGGGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | GCCTTTAACCTCAGTGCTTGGAAGGCAGAGGCAGGCAGACCTATGTaGGTTCGAGGCCAGCCTGTTCTACAGAGTGAGTTCCAGGATAGC | + |
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Preference number: 1 (lower is better) Translates to: AFNLSAWKAEAGRPM*VRGQPVLQSEFQDS Trigger: GCTATCCTGGAACTCACTCTGTAGAACAGGCTGGCCTCGAACTCACATAGGTCTGCCTGCCTCTGCCTTCCAAGCACTGAGGTTAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CCA 90 bp | TGTGGTCCCCAGCAGCTGGTGCTGCTTGGAAGGCAGTGGAACCTGTaGAATGTGAAGTCTGTCCTTCTGCTTGAAGGATGTACCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: CGPQQLVLLGRQWNL*NVKSVLLLEGCTCL Trigger: AAGGCAGGTACATCCTTCAAGCAGAAGGACAGACTTCACATTCCACAGGTTCCACTGCCTTCCAAGCAGCACCAGCTGCTGGGGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CCA 90 bp | AACTCACCTTTGACCTCACTGTGGTCCCCAGCAGCTGGTGCTGCTTaGAAGGCAGTGGAACCTGTGGAATGTGAAGTCTGTCCTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NSPLTSLWSPAAGAA*KAVEPVECEVCPSA Trigger: AGCAGAAGGACAGACTTCACATTCCACAGGTTCCACTGCCTTCCAAGCAGCACCAGCTGCTGGGGACCACAGTGAGGTCAAAGGTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CCA 90 bp | ACTAAGAATGGCCCTGAGGTCCCTGAAGATCAGCCCAGTGCCCACTaGCTCCACTCACTGGCGATTTTAATGTGCGGTGCTGCCTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: TKNGPEVPEDQPSAH*LHSLAILMCGAAFL Trigger: TAGAAAGGCAGCACCGCACATTAAAATCGCCAGTGAGTGGAGCCAGTGGGCACTGGGCTGATCTTCAGGGACCTCAGGGCCATTCTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | CCCAGCAGCTGGTGCTGCTTGGAAGGCAGTGGAACCTGTGGAATGTaGAGTCTGTCCTTCTGCTTGAAGGATGTACCTGCCTTTAGATGC | + |
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Preference number: 1 (lower is better) Translates to: PSSWCCLEGSGTCGM*SLSFCLKDVPAFRC Trigger: GCATCTAAAGGCAGGTACATCCTTCAAGCAGAAGGACAGACTTCACATTCCACAGGTTCCACTGCCTTCCAAGCAGCACCAGCTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CCA 90 bp | ATTTTAATGTGCGGTGCTGCCTTTCTAAACTGTGGAGACACATCATaGCAACTGTGGATCTGTTCAAGCCCCCAACACTGGAAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ILMCGAAFLNCGDTS*QLWICSSPQHWKSP Trigger: TGGGCTCTTCCAGTGTTGGGGGCTTGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCGCACATTAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR TCA 90 bp | TTTCAAGTGTCCACACTGGGGTCTATACAGATCCCTGTGAGAATGTaGATACCAACACATGCCTGCATCACTAAGAATGGCCCTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: FQVSTLGSIQIPVRM*IPTHACITKNGPEV Trigger: GACCTCAGGGCCATTCTTAGTGATGCAGGCATGTGTTGGTATTCACATTCTCACAGGGATCTGTATAGACCCCAGTGTGGACACTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR GCA 90 bp | GCCTCAAATAAACAAAGAAACAAACAAACAAACAACAAAGAATACTaGTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATCACACGCAT | + |
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Preference number: 1 (lower is better) Translates to: ASNKQRNKQTNNKEY*CSCRGYKFSSHHTH Trigger: ATGCGTGTGATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGTTTGTTTGTTTCTTTGTTTATTTGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | TTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGCAGTATaGCTCCTGAGTGGGCAGGCAGGCAGAGGCAAAACAGCCACGGAG | + |
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Preference number: 2 (lower is better) Translates to: FQSTAGTPTSNATAV*LLSGQAGRGKTATE Trigger: CTCCGTGGCTGTTTTGCCTCTGCCTGCCTGCCCACTCAGGAGCAATACTGCGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | CATGAACCCCCTGAAATCGCCAGCCAGGGTAATCCATCCTTCAGGTaGTCTCTGCCAGGTCCCTGTCCCCAGCACTGTCTACCCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HEPPEIASQGNPSFR*SLPGPCPQHCLPTQ Trigger: CTGAGTGGGTAGACAGTGCTGGGGACAGGGACCTGGCAGAGACAACCTGAAGGATGGATTACCCTGGCTGGCGATTTCAGGGGGTTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | ACCCTTAGAGGTTCCTCTGTCAATCTAAAAGGCTGCCAGGTGGGGTaGGCAGGAGCCCATCAGTCACAGCCTTCCAGAGCACAGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TLRGSSVNLKGCQVG*AGAHQSQPSRAQLE Trigger: TTCCAGCTGTGCTCTGGAAGGCTGTGACTGATGGGCTCCTGCCAACCCCACCTGGCAGCCTTTTAGATTGACAGAGGAACCTCTAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | AAAGCGGGTCTTCTGCCCAAAGCAGCATCCTGCCTCTTTTCGGACTaGTCCTTTCCTTACCCAACGGGCCTGCCTTGGACCTTTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KAGLLPKAASCLFSD*SFPYPTGLPWTFLP Trigger: AGGCAGAAAGGTCCAAGGCAGGCCCGTTGGGTAAGGAAAGGACAAGTCCGAAAAGAGGCAGGATGCTGCTTTGGGCAGAAGACCCGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | CATCAGTCACAGCCTTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGGCTTCCAGGGGAACATaGAAAGACAGCAGCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: HQSQPSRAQLEPQHPTQPASRGT*KDSSSL Trigger: AAGTGAGCTGCTGTCTTTTCATGTTCCCCTGGAAGC...CGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGATCCAACCTCCCGACCCTGCACACAACCTATACAATCTCTGCCCTGAGAGAAGCTGGTCCAAATaGGAGCTCAGACCCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGIQPPDPAHNLYNLCPERSWSK*ELRPFS Trigger: AGAGAAGGGTCTGAGCTCCCATTTGGACCAGCTTCT...CTCAGGGCAGAGATTGTATAGGTTGTGTGCAGGGTCGGGAGGTTGGATCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | CAAGTATTGTGCTTTGGTTGTGAACCGTCCTCCATGAACTCACCTTaGACCTCACTGTGGTCCCCAGCAGCTGGTGCTGCTTGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QVLCFGCEPSSMNSP*TSLWSPAAGAAWKA Trigger: TGCCTTCCAAGCAGCACCAGCTGCTGGGGACCACAGTGAGGTCAAAGGTGAGTTCATGGAGGACGGTTCACAACCAAAGCACAATACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCATGGGCTGCTTCCATCTaGTGGGTGGTCTCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAAFLNCGDTSWQLWICSWAASI*WVVSGD Trigger: GTCCCCAGAGACCACCCACCAGATGGAAGCAGCCCA...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCCCAACGGGCCTGCCTTaGACCTTTCTGCCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RCCLSKLWRHIMATVDLFPTGLP*TFLPSF Trigger: GAAGGAAGGCAGAAAGGTCCAAGGCAGGCCCGTTGG...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGAAACAAGGTCAGGGACCTGGCGTCTGACACAGGCCTATGTCAACATAAGCCGATCTGTAGCCTaGAACCCATGGAACTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QGETRSGTWRLTQAYVNISRSVA*NPWNFP Trigger: AGGAAAGTTCCATGGGTTCCAGGCTACAGATCGGCT...TATGTTGACATAGGCCTGTGTCAGACGCCAGGTCCCTGACCTTGTTTCCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTCTGTGGATTTACCTTGGGGGCACTGTAGAAAACAGTTTCAGAGATGTCCTTCCATCTGGTGGGTaGTCTCTGGGGACAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RPLWIYLGGTVENSFRDVLPSGG*SLGTAV Trigger: GACAGCTGTCCCCAGAGACCACCCACCAGATGGAAG...GACATCTCTGAAACTGTTTTCTACAGTGCCCCCAAGGTAAATCCACAGAGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | TCCGCCATGCTAGGACCTGCACAGCCTATGTGTGTGCTTCAAGTATaGTGCTTTGGTTGTGAACCGTCCTCCATGAACTCACCTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: SAMLGPAQPMCVLQV*CFGCEPSSMNSPLT Trigger: GGTCAAAGGTGAGTTCATGGAGGACGGTTCACAACCAAAGCACAATACTTGAAGCACACACATAGGCTGTGCAGGTCCTAGCATGGCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCACTTAGAAGTCCTCACTaGCCCTGGCACCAGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GAAFLNCGDTSWQLWICSLRSPH*PWHQSD Trigger: GTCACTCTGGTGCCAGGGGCAGTGAGGACTTCTAAG...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAACAAAGCGGGTCTTCTaGCCAAAGCAGCATCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GAAFLNCGDTSWQLWICSTKRVF*PKQHPA Trigger: GGCAGGATGCTGCTTTGGGCAGAAGACCCGCTTTGT...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTCTGTGGATTTACCTTGGGGGCACTGTAGAAAACAGTTTCAGAGATGTCTCTCCCAGCCTCAGGTaGTCACTCTGCTCTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RPLWIYLGGTVENSFRDVSPSLR*SLCSQS Trigger: TGACTGAGAGCAGAGTGACCACCTGAGGCTGGGAGA...GACATCTCTGAAACTGTTTTCTACAGTGCCCCCAAGGTAAATCCACAGAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | GTATGTGATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAAGCTGCTTCCATCTGGTaGGTGGTCTCTGGGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: VCDTLLLSSLGTQTFIHKAASIW*VVSGDS Trigger: GCTGTCCCCAGAGACCACCCACCAGATGGAAGCAGC...TTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATCACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR GCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCGTACCTGCCTTTAGATaGCCTTTCTCTGCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RCCLSKLWRHIMATVDLFVPAFR*PFSASW Trigger: CCAGGAAGCAGAGAAAGGGCATCTAAAGGCAGGTAC...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCGAGAGTAGACAACCTTaGGCAGAGGCTCAAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RCCLSKLWRHIMATVDLFESRQP*AEAQRH Trigger: ATGCCTTTGAGCCTCTGCCCAAGGTTGTCTACTCTC...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCATCTCTGCCCTGAGATaGGTTTCAAGAGAACACGAA | + |
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Preference number: 2 (lower is better) Translates to: RCCLSKLWRHIMATVDLFISALR*VSREHE Trigger: TTCGTGTTCTCTTGAAACTCATCTCAGGGCAGAGAT...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACAAAGAATACTGCTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATCACAGCTCACTTTGAGGCGTaGAAAGAGCTCTTGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TTKNTAALAGDTSSVPITAHFEA*KELLGQ Trigger: CTGTCCCAAGAGCTCTTTTCACGCCTCAAAGTGAGC...TGTGATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTCTGTGGATTTACCTTGGGGGCACTGTAGAAAACAGTTTCAGAGATGTCATGAAACAAGAGGTCTaGAAGGGCTGTTCTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: RPLWIYLGGTVENSFRDVMKQEV*KGCSQT Trigger: GGTCTGAGAACAGCCCTTTCAGACCTCTTGTTTCAT...GACATCTCTGAAACTGTTTTCTACAGTGCCCCCAAGGTAAATCCACAGAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | TCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCTGAAAGATGCAGCGTTATaGCTGTCCAAAACACAATCC | + |
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Preference number: 2 (lower is better) Translates to: SIWPNGQQLPGSLEEDLLKDAAL*LSKTQS Trigger: GGATTGTGTTTTGGACAGCCATAACGCTGCATCTTT...CAGCAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAGTAGCCTGGAACCCATaGAACTTTCCTAGAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: GAAFLNCGDTSWQLWICSVAWNP*NFPRGC Trigger: ACATCCTCTAGGAAAGTTCCATGGGTTCCAGGCTAC...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTCTGTGGATTTACCTTGGGGGCACTGTAGAAAACAGTTTCAGAGATGTCCGTGAAAAGAGCTCTTaGGACAGTAGGCATGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: RPLWIYLGGTVENSFRDVREKSS*DSRHVV Trigger: GACTACATGCCTACTGTCCCAAGAGCTCTTTTCACG...GACATCTCTGAAACTGTTTTCTACAGTGCCCCCAAGGTAAATCCACAGAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 90 bp | AGAGTCACCTGTAACTCCAACTCCAGGGTATGTGATACCCTCCTTTaGTCCTCTCTAGGCACCCAGACATTCATCCATAAACACACACAT | + |
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Preference number: 2 (lower is better) Translates to: RVTCNSNSRVCDTLL*SSLGTQTFIHKHTH Trigger: ATGTGTGTGTTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATCACATACCCTGGAGTTGGAGTTACAGGTGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | GTATGTGATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAACACTTTACTAGTCCTTaGGCTTTGTGGCGAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: VCDTLLLSSLGTQTFIHKHFTSP*ALWRDP Trigger: AGGGTCTCGCCACAAAGCCCAAGGACTAGTAAAGTG...TTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATCACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAAACAAAGAATACTGCTaGTCTTGCAGGGGATACAAG | + |
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Preference number: 2 (lower is better) Translates to: GAAFLNCGDTSWQLWICSNKEYC*SCRGYK Trigger: CTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTT...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCACAAAATACATCTCTTaGGAGAGACATAGGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: RCCLSKLWRHIMATVDLFTKYIS*ERHRCI Trigger: GATACACCTATGTCTCTCTCAAGAGATGTATTTTGT...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTCTGTGGATTTACCTTGGGGGCACTGTAGAAAACAGTTTCAGAGATGTCTCAGTAGAACTCTGCTaGAATAAACCTATTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: RPLWIYLGGTVENSFRDVSVELC*NKPIGS Trigger: AGATCCAATAGGTTTATTTCAGCAGAGTTCTACTGA...GACATCTCTGAAACTGTTTTCTACAGTGCCCCCAAGGTAAATCCACAGAGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAGAATACTGCTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATCACATGTAGACCTGGCATATaGACTGTCTCAAATCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TTKNTAALAGDTSSVPITCRPGI*TVSNLV Trigger: AACAAGATTTGAGACAGTCCATATGCCAGGTCTACA...TGTGATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR GCA 72 bp | GCAGCCTCCAAAGTCACAGTTCTTAGAAGTCCTCACTaGCCCTGGCACCAGAGTGACTGCCAGGCTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AASKVTVLRSPH*PWHQSDCQAAH Trigger: GTGGGCAGCCTGGCAGTCACTCTGGTGCCAGGGGCAGTGAGGACTTCTAAGAACTGTGACTTTGGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | TCGCCAGCCAGGGTAATCCATCCTTCAGGTTGTCTCTaGCAGGTCCCTGTCCCCAGCACTGTCTACCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SPARVIHPSGCL*QVPVPSTVYPL Trigger: GAGTGGGTAGACAGTGCTGGGGACAGGGACCTGGCAGAGACAACCTGAAGGATGGATTACCCTGGCTGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GGCCCTGAGGTCCCTGAAGATCAGCCCAGTGCCCACTaGCTCCACTCACTGGCGATTTTAATGTGCGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPEVPEDQPSAH*LHSLAILMCGA Trigger: AGCACCGCACATTAAAATCGCCAGTGAGTGGAGCCAGTGGGCACTGGGCTGATCTTCAGGGACCTCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCAGTCACAGCCTTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGAACCCTGAGCACCCATaGCCTTGCCTAGGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: HQSQPSRAQLEPQHPTQPNPEHP*PCLGSQ Trigger: CTGTGAGCCTAGGCAAGGCAATGGGTGCTCAGGGTT...CGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | ATAACAGTGGGCTGCTTCCATCTGGTGGGTGGTCTCTaGGGACAGCTGTCCCACGGTCTGTCCTACCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: ITVGCFHLVGGL*GQLSHGLSYQT Trigger: GGTTTGGTAGGACAGACCGTGGGACAGCTGTCCCCAGAGACCACCCACCAGATGGAAGCAGCCCACTGTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | TCCAAAGTCACAGTTCTTAGAAGTCCTCACTGCCCCTaGCACCAGAGTGACTGCCAGGCTGCCCACACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKVTVLRSPHCP*HQSDCQAAHTP Trigger: TGGGGTGTGGGCAGCCTGGCAGTCACTCTGGTGCCAGGGGCAGTGAGGACTTCTAAGAACTGTGACTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GAACCGTCCTCCATGAACTCACCTTTGACCTCACTGTaGTCCCCAGCAGCTGGTGCTGCTTGGAAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EPSSMNSPLTSL*SPAAGAAWKAV Trigger: CACTGCCTTCCAAGCAGCACCAGCTGCTGGGGACCACAGTGAGGTCAAAGGTGAGTTCATGGAGGACGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | CCCCAACACTGGAAGAGCCCAACAGCAGGCAATGGGTaGCTCACAAAGCGGGTCTTCTGCCCAAAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQHWKSPTAGNG*LTKRVFCPKQH Trigger: ATGCTGCTTTGGGCAGAAGACCCGCTTTGTGAGTCACCCATTGCCTGCTGTTGGGCTCTTCCAGTGTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GAACTCACCTTTGACCTCACTGTGGTCCCCAGCAGCTaGTGCTGCTTGGAAGGCAGTGGAACCTGTGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: ELTFDLTVVPSS*CCLEGSGTCGM Trigger: CATTCCACAGGTTCCACTGCCTTCCAAGCAGCACCAGCTGCTGGGGACCACAGTGAGGTCAAAGGTGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | CAGGAGCCCATCAGTCACAGCCTTCCAGAGCACAGCTaGAACCCCAACATCCAACGCAACCGCAGTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QEPISHSLPEHS*NPNIQRNRSIA Trigger: AGCAATACTGCGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATGGGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | CTCAGTGCTTGGAAGGCAGAGGCAGGCAGACCTATGTaGGTTCGAGGCCAGCCTGTTCTACAGAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSAWKAEAGRPM*VRGQPVLQSEF Trigger: GAACTCACTCTGTAGAACAGGCTGGCCTCGAACTCACATAGGTCTGCCTGCCTCTGCCTTCCAAGCACTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | TCAAGTTCAAGACCAACCAGGGCTATAACAGTGGGCTaGTTCCATCTGGTGGGTGGTCTCTGGGGACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSRPTRAITVG*FHLVGGLWGQL Trigger: CAGCTGTCCCCAGAGACCACCCACCAGATGGAAGCAGCCCACTGTTATAGCCCTGGTTGGTCTTGAACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | GGAACCCTTAGAGGTTCCTCTGTCAATCTAAAAGGCTaGCAGGTGGGGTTGGCAGGAGCCCATCAGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GTLRGSSVNLKG*QVGLAGAHQSQ Trigger: CTGTGACTGATGGGCTCCTGCCAACCCCACCTGGCAGCCTTTTAGATTGACAGAGGAACCTCTAAGGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCCCCAACGGGCCTGCCTaGGACCTTTCTGCCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RCCLSKLWRHIMATVDLFPNGPA*DLSAFL Trigger: AAGGAAGGCAGAAAGGTCCAAGGCAGGCCCGTTGGG...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GTAGGAAGCATGAGCCGATCTGTAGCCTGGAACCCATaGAACTTTCCTAGAGGATGTGCTCCAGAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VGSMSRSVAWNP*NFPRGCAPEGT Trigger: GGTGCCTTCTGGAGCACATCCTCTAGGAAAGTTCCATGGGTTCCAGGCTACAGATCGGCTCATGCTTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | AGGCTCTCTGTAGGAAGCATGAGCCGATCTGTAGCCTaGAACCCATGGAACTTTCCTAGAGGATGTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLSVGSMSRSVA*NPWNFPRGCAP Trigger: TGGAGCACATCCTCTAGGAAAGTTCCATGGGTTCCAGGCTACAGATCGGCTCATGCTTCCTACAGAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAACGCCCCCATCAGGTTaGAGAGGGCAAAAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GAAFLNCGDTSWQLWICSTPPSG*RGQKPV Trigger: GACTGGCTTTTGCCCTCTCAAACCTGATGGGGGCGT...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCCAAGGTGCCTTCTTCTaGCTGAAGAAGGAGGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RCCLSKLWRHIMATVDLFQGAFF*LKKEGT Trigger: AGTGCCCTCCTTCTTCAGCAAGAAGAAGGCACCTTG...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | AGTGCCCACTGGCTCCACTCACTGGCGATTTTAATGTaGGGTGCTGCCTTTCTAAACTGTGGAGACACATCA | + |
|
Preference number: 3 (lower is better) Translates to: SAHWLHSLAILM*GAAFLNCGDTS Trigger: TGATGTGTCTCCACAGTTTAGAAAGGCAGCACCGCACATTAAAATCGCCAGTGAGTGGAGCCAGTGGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCATCCATGAACTCACCTTaGACCTCACTGTGGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GAAFLNCGDTSWQLWICSSMNSP*TSLWSP Trigger: TGGGGACCACAGTGAGGTCAAAGGTGAGTTCATGGA...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | CTGGCTCCACTCACTGGCGATTTTAATGTGCGGTGCTaGCTTTCTAAACTGTGGAGACACATCATGGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: LAPLTGDFNVRC*LSKLWRHIMAT Trigger: AGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCGCACATTAAAATCGCCAGTGAGTGGAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | CTGGCATATGGACTGTCTCAAATCTTGTTCAGAAGCTaGTCCAAATGGGAGCTCAGACCCTTCTCTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LAYGLSQILFRS*SKWELRPFSLP Trigger: TGGGAGAGAGAAGGGTCTGAGCTCCCATTTGGACCAGCTTCTGAACAAGATTTGAGACAGTCCATATGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GAAAGGGCTGTTCTCAGACCACACTTTACTAGTCCTTaGGCTTTGTGGCGAGACCCTCAGTTCACATTACAA | + |
|
Preference number: 3 (lower is better) Translates to: ERAVLRPHFTSP*ALWRDPQFTLQ Trigger: TTGTAATGTGAACTGAGGGTCTCGCCACAAAGCCCAAGGACTAGTAAAGTGTGGTCTGAGAACAGCCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | GCCTATGTGTGTGCTTCAAGTATTGTGCTTTGGTTGTaGACCGTCCTCCATGAACTCACCTTTGACCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: AYVCASSIVLWL*TVLHELTFDLT Trigger: AGTGAGGTCAAAGGTGAGTTCATGGAGGACGGTTCACAACCAAAGCACAATACTTGAAGCACACACATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | TCCACACTGGGGTCTATACAGATCCCTGTGAGAATGTaGATACCAACACATGCCTGCATCACTAAGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: STLGSIQIPVRM*IPTHACITKNG Trigger: GCCATTCTTAGTGATGCAGGCATGTGTTGGTATTCACATTCTCACAGGGATCTGTATAGACCCCAGTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | TTCAAGTGTCCACACTGGGGTCTATACAGATCCCTGTaGGAATGTGAATACCAACACATGCCTGCATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: FKCPHWGLYRSL*ECEYQHMPASL Trigger: TAGTGATGCAGGCATGTGTTGGTATTCACATTCTCACAGGGATCTGTATAGACCCCAGTGTGGACACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CCA 72 bp | GTTCTCAGACCACACTTTACTAGTCCTTGGGCTTTGTaGCGAGACCCTCAGTTCACATTACAAAGGTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLRPHFTSPWAL*RDPQFTLQRLE Trigger: TTCTAACCTTTGTAATGTGAACTGAGGGTCTCGCCACAAAGCCCAAGGACTAGTAAAGTGTGGTCTGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | CAAAGAAACAAACAAACAAACAACAAAGAATACTGCTaGTCTTGCAGGGGATACAAGTTCAGTTCCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRNKQTNNKEYC*SCRGYKFSSHH Trigger: GTGATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGTTTGTTTGTTTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR GCA 72 bp | AAACAAAGAAACAAACAAACAAACAACAAAGAATACTaGTGCTCTTGCAGGGGATACAAGTTCAGTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KQRNKQTNNKEY*CSCRGYKFSSH Trigger: ATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGTTTGTTTGTTTCTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR TCA 72 bp | GGTTTTTATCAGACATTTTGCCATTACAGGTCTCACTaGATTCTAGATGATCTTGCAACCACTTTCAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: GFYQTFCHYRSH*ILDDLATTFNL Trigger: CAAATTGAAAGTGGTTGCAAGATCATCTAGAATTCAGTGAGACCTGTAATGGCAAAATGTCTGATAAAAACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR TCA 90 bp | CATCAGTCACAGCCTTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGAGAGGCGCTTGCGGATaGCACCTGTATGGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQSQPSRAQLEPQHPTQPRGACG*HLYGGS Trigger: GGACCCACCATACAGGTGTCATCCGCAAGCGCCTCT...CGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR GCA 90 bp | GATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAACACACAGCCAAGCTGGGCTTCTaGGCCCCACAGCCGCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTLLLSSLGTQTFIHKHTAKLGF*APQPRP Trigger: GGGGCGCGGCTGTGGGGCGCAGAAGCCCAGCTTGGC...TGTGTGTTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | CATCAGTCACAGCCTTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGCTCCAGGAGAAAGCTTaGTGCCCCCTCCGTACACTC | + |
|
Preference number: 4 (lower is better) Translates to: HQSQPSRAQLEPQHPTQPLQEKA*CPLRTL Trigger: GAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAG...CGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR TCA 90 bp | CAGGGGATCCAACCTCCCGACCCTGCACACAACCTATACAATCTCTGCCCTGAGTGTGGAGAGGACCCTTaGTTGTCTCTGACCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGIQPPDPAHNLYNLCPECGEDP*LSLTAA Trigger: TGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACA...CTCAGGGCAGAGATTGTATAGGTTGTGTGCAGGGTCGGGAGGTTGGATCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR GCA 90 bp | CTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCAGAGGCGGTGGAACTaGAGTGGTGGCGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIWPNGQQLPGSLEEDLQRRWN*SGGGSS Trigger: GCTGCTGCCGCCACCACTGCAGTTCCACCGCCTCTG...CAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGGCGGTGGAACTGCAGTaGTGGCGGCAGCAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIWPNGQQLPGSLEEDLAVELQ*WRQQLS Trigger: GCTCAGCTGCTGCCGCCACCACTGCAGTTCCACCGC...CAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CCA 90 bp | CATCAGTCACAGCCTTCCAGAGCACAGCTGGAACCCCAACATCCAACGCAACCGTGCACATTCAGGAAATaGGCATACGCCGCACGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQSQPSRAQLEPQHPTQPCTFRK*AYAARA Trigger: TGCGCGTGCGGCGTATGCCCATTTCCTGAATGTGCA...CGGTTGCGTTGGATGTTGGGGTTCCAGCTGTGCTCTGGAAGGCTGTGACTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | AACCCAGGGGATCCAACCTCCCGACCCTGCACACAACCTATACAATCTCTGCCCGCCTTCAAGCTTCACTaGGAAGAGGCGCTTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPGDPTSRPCTQPIQSLPAFKLH*EEALAD Trigger: ATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGC...GGGCAGAGATTGTATAGGTTGTGTGCAGGGTCGGGAGGTTGGATCCCCTGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CAA 72 bp | ACAGCTGGAACCCCAACATCCAACGCAACCGCAGTATaGCTCCTGAGTGGGCAGGCAGGCAGAGGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TAGTPTSNATAV*LLSGQAGRGKT Trigger: TGTTTTGCCTCTGCCTGCCTGCCCACTCAGGAGCAATACTGCGGTTGCGTTGGATGTTGGGGTTCCAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CAA 72 bp | GGTTCCTCTGTCAATCTAAAAGGCTGCCAGGTGGGGTaGGCAGGAGCCCATCAGTCACAGCCTTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSVNLKGCQVG*AGAHQSQPSRA Trigger: TGCTCTGGAAGGCTGTGACTGATGGGCTCCTGCCAACCCCACCTGGCAGCCTTTTAGATTGACAGAGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR GCA 90 bp | AGGCGCAGCACAGAGAGTAGACAACCTTGGGCAGAGGCTCAAAGGCATCTGGAATTGTACATGGAGAGGTaGTTCTGTAGGGCGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSTESRQPWAEAQRHLELYMER*FCRAPS Trigger: GCTGGGCGCCCTACAGAAGCACCTCTCCATGTACAA...TTCCAGATGCCTTTGAGCCTCTGCCCAAGGTTGTCTACTCTCTGTGCTGCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | TCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCTGAGCTTTGCCCCAGTGTaGGAGCAGCAGGCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIWPNGQQLPGSLEEDLLSFAPV*EQQARE Trigger: TTCTCGGGCCTGCTGCTCCCACACTGGGGCAAAGCT...CAGCAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCCGGATGACACCTGTATaGTGGGTCCGGGCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCCLSKLWRHIMATVDLFRMTPV*WVRAVS Trigger: GCTGACGGCCCGGACCCACCATACAGGTGTCATCCG...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CAA 72 bp | TGCTTTGGTTGTGAACCGTCCTCCATGAACTCACCTTaGACCTCACTGTGGTCCCCAGCAGCTGGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFGCEPSSMNSP*TSLWSPAAGAA Trigger: AGCAGCACCAGCTGCTGGGGACCACAGTGAGGTCAAAGGTGAGTTCATGGAGGACGGTTCACAACCAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR TCA 90 bp | CCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATAGCCTGCCAGCTGTCTaGCAGCTGAAGCGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSIWPNGQQLPGSLEEDSLPAV*QLKRQL Trigger: CAGCTGTCGCTTCAGCTGTCAGACAGCTGGCAGGCT...ATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAGGCCATCATCCTGGGTaGGAAGCCGCCACCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GAAFLNCGDTSWQLWICSGHHPG*EAATPY Trigger: GTATGGGGTGGCGGCTTCTCACCCAGGATGATGGCC...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | GATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAACACACAGCTGGGCCATCATCCTaGGTGAGAAGCCGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTLLLSSLGTQTFIHKHTAGPSS*VRSRHP Trigger: GGGGTGGCGGCTTCTCACCCAGGATGATGGCCCAGC...TGTGTGTTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAAGTCCCACGTGTCCCTaGCCAGCCCTGAACTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAFLNCGDTSWQLWICSSPTCP*PALNLP Trigger: GGGCAAGTTCAGGGCTGGCCAGGGACACGTGGGACT...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| 3UTR CAA 72 bp | AGCTGCGGCAAACTGCACCTCAATTCAGAGAGCACCTaGAGCCCTAGCCTAAGCAGCCTCCAAAGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCGKLHLNSEST*SPSLSSLQSHS Trigger: ACTGTGACTTTGGAGGCTGCTTAGGCTAGGGCTCAAGGTGCTCTCTGAATTGAGGTGCAGTTTGCCGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR TCA 90 bp | CCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCAGAAGCTTCTGACTTaGCTGGTTGGGGTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSIWPNGQQLPGSLEEDQKLLT*LVGVPG Trigger: GCCTGGGACCCCAACCAGTCAAGTCAGAAGCTTCTG...ATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR TCA 90 bp | TTGCAACCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGGTGGCGGCAGCAGCTaGGCAGTTGACAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQPLSIWPNGQQLPGSLEGGGSS*AVDKPK Trigger: CTTTGGCTTGTCAACTGCTCAGCTGCTGCCGCCACC...TTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGGTTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR GCA 90 bp | TCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCTGGACTTTCCTGAGCTTTaGCCCAGTGTGGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIWPNGQQLPGSLEEDLLDFPEL*PSVGAA Trigger: TGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTC...CAGCAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR GCA 90 bp | GATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAACACACACCTGAACTTGCCCGCTaGCTGGCCTGTGGCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTLLLSSLGTQTFIHKHTPELAR*LACGSH Trigger: GTGACTGCCACAGGCCAGGCAGCGGGCAAGTTCAGG...TGTGTGTTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS-3UTR CCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCAATGACACCTGTATGGTaGGTCCGGGCCGTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAFLNCGDTSWQLWICSMTPVW*VRAVSS Trigger: GGAGCTGACGGCCCGGACCCACCATACAGGTGTCAT...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 72 bp | TTCGGACTTGTCCTTTCCTTACCCAACGGGCCTGCCTaGGACCTTTCTGCCTTCCTTCTGAAGGCTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FGLVLSLPNGPA*DLSAFLLKARM Trigger: CATTCTAGCCTTCAGAAGGAAGGCAGAAAGGTCCAAGGCAGGCCCGTTGGGTAAGGAAAGGACAAGTCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAACAGCAGCTGAGCAGTTaGCAAGCCAAAGCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPLSIWPNGQQLPGSLEQQLSS*QAKAAG Trigger: CCCTGCAGCTTTGGCTTGTCAACTGCTCAGCTGCTG...TTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGGTTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR CCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCGCAGTCTCAGAGGTTTaGGGGACACAGGGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCCLSKLWRHIMATVDLFAVSEV*GTQGST Trigger: TGTGCTACCCTGTGTCCCCCAAACCTCTGAGACTGC...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR TCA 90 bp | CCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATAACTCCAGAAGCTTCTaGCTTGACTGGTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSIWPNGQQLPGSLEEDNSRSF*LDWLGS Trigger: GGACCCCAACCAGTCAAGTCAGAAGCTTCTGGAGTT...ATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR TCA 90 bp | CCTGCACAGCCTATGTGTGTGCTTCAAGTATTGTGCTTTGGTTGTGAACCGTCCAGCTCACGCCATTCATaGAGACCAGGTTGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAQPMCVLQVLCFGCEPSSSRHS*RPGWTP Trigger: TGGAGTCCAACCTGGTCTTCATGAATGGCGTGAGCT...GGACGGTTCACAACCAAAGCACAATACTTGAAGCACACACATAGGCTGTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR GCA 90 bp | TTGCAACCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAATTGACAAGCCAAAGCTaGAGGGAAGGCAAGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQPLSIWPNGQQLPGSLELTSQS*REGKPA Trigger: GGCAGGCTTGCCTTCCCTGCAGCTTTGGCTTGTCAA...TTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGGTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCGCCGGATCTTGTACATaGAGAGGTGCTTCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCCLSKLWRHIMATVDLFAGSCT*RGASVG Trigger: CCCTACAGAAGCACCTCTCCATGTACAAGATCCGGC...GAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS-3UTR TCA 90 bp | ACAAACAACAAAGAATACTGCTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATGACTTGGCTCCACGGTaGCCTTCCGCCGGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNNKEYCCSCRGYKFSSHDLAPR*PSAGSC Trigger: ACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTC...ATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | TCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCTGTTGCTTTCTGTAGTGTaGGCTGGGCTGGTAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIWPNGQQLPGSLEEDLLLLSVV*AGLVTE Trigger: TTCTGTTACCAGCCCAGCCCACACTACAGAAAGCAA...CAGCAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR TCA 90 bp | CCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATAGGGAGGGACAAAGCTaGAGCACCCATCTTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSIWPNGQQLPGSLEEDREGQS*STHLEN Trigger: ATTTTCAAGATGGGTGCTTCAGCTTTGTCCCTCCCT...ATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGCCTTTCTAAACTGTGGAGACACATCATGGCAACTGTGGATCTGTTCATCGGAGGTCTTGATGTaGAGAGGACCCTTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GAAFLNCGDTSWQLWICSSEVLM*RGPLIV Trigger: GACAATCAAGGGTCCTCTCCACATCAAGACCTCCGA...TGAACAGATCCACAGTTGCCATGATGTGTCTCCACAGTTTAGAAAGGCAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| 3UTR CAA 72 bp | CTAGGACCTGCACAGCCTATGTGTGTGCTTCAAGTATaGTGCTTTGGTTGTGAACCGTCCTCCATGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGPAQPMCVLQV*CFGCEPSSMNS Trigger: TGAGTTCATGGAGGACGGTTCACAACCAAAGCACAATACTTGAAGCACACACATAGGCTGTGCAGGTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGCACTTAGTGAGGTTGTaGGAAGACTTTCCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSIWPNGQQLPGSLEEDLHLVRL*EDFPEL Trigger: AAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTG...CAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS-3UTR CCA 90 bp | CTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGAGGATCTGAGGCAAGTCTGTGATTaGTCCAAACATCCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIWPNGQQLPGSLEEDLRQVCD*SKHPFW Trigger: CCAGAAAGGATGTTTGGACCAATCACAGACTTGCCT...CAGATCCTCTTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS GCA 90 bp | GCCCGTCCAGCCGGAAGCAAGTCCAGGCCACACCGTCCGCGGGGTTaGTGCCAAGAAGGCCAAAGCCACGGGCTAGGCAGTGACTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARPAGSKSRPHRPRG*CQEGQSHGLGSDSR Trigger: CCGCGAGTCACTGCCTAGCCCGTGGCTTTGGCCTTCTTGGCAGCAACCCCGCGGACGGTGTGGCCTGGACTTGCTTCCGGCTGGACGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054523.6 ENSMUST00000137433.2 |
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| CDS GCA 90 bp | CGTCCAGCCGGAAGCAAGTCCAGGCCACACCGTCCGCGGGGTTGCTaGCAAGAAGGCCAAAGCCACGGGCTAGGCAGTGACTCGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAGSKSRPHRPRGC*QEGQSHGLGSDSRS Trigger: GGACCGCGAGTCACTGCCTAGCCCGTGGCTTTGGCCTTCTTGGCAGCAACCCCGCGGACGGTGTGGCCTGGACTTGCTTCCGGCTGGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054523.6 ENSMUST00000137433.2 |
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| CDS GCA 90 bp | CAAAGCCAGTCCCACGTGTCCCTGGCCAGCCCTGAACTTGCCCGCTaGCTGGCCTGTGGCAGTCACCGTCACTATGGCGCCAGGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QSQSHVSLASPELAR*LACGSHRHYGARAD Trigger: GTCAGCCCTGGCGCCATAGTGACGGTGACTGCCACAGGCCAGGCAGCGGGCAAGTTCAGGGCTGGCCAGGGACACGTGGGACTGGCTTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 90 bp | GCCTGTGGCAGTCACCGTCACTATGGCGCCAGGGCTGACGCCACTTaGAGGCAGGGGGCCTTCAAGCTTCACTGGGAAGAGGCGCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ACGSHRHYGARADAT*RQGAFKLHWEEALA Trigger: CGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCCTGCAAGTGGCGTCAGCCCTGGCGCCATAGTGACGGTGACTGCCACAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | GCCAGGGCTGACGCCACTTGCAGGCAGGGGGCCTTCAAGCTTCACTaGGAAGAGGCGCTTGCGGATGACACCTGTATGGTGGGTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARADATCRQGAFKLH*EEALADDTCMVGPG Trigger: GCCCGGACCCACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCCTGCAAGTGGCGTCAGCCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 90 bp | TCTCTGACCGCAGCAAAGCCAGTCCCACGTGTCCCTGGCCAGCCCTaGACTTGCCCGCTGCCTGGCCTGTGGCAGTCACCGTCACTATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTAAKPVPRVPGQP*TCPLPGLWQSPSLW Trigger: CCATAGTGACGGTGACTGCCACAGGCCAGGCAGCGGGCAAGTTCAGGGCTGGCCAGGGACACGTGGGACTGGCTTTGCTGCGGTCAGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 90 bp | CAGGCAGGGGGCCTTCAAGCTTCACTGGGAAGAGGCGCTTGCGGATaGCACCTGTATGGTGGGTCCGGGCCGTCAGCTCCTGCCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: QAGGLQASLGRGACG*HLYGGSGPSAPAQC Trigger: ACATTGGGCAGGAGCTGACGGCCCGGACCCACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 90 bp | CAGGGCTGGGCCATCATCCTGGGTGAGAAGCCGCCACCCCATACGTaGAGTCCGGGGGTCACGGATAAGCATGGTGGTGCCTTCTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QGWAIILGEKPPPHT*SPGVTDKHGGAFYP Trigger: AGGGTAGAAGGCACCACCATGCTTATCCGTGACCCCCGGACTGCACGTATGGGGTGGCGGCTTCTCACCCAGGATGATGGCCCAGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | GCAGTCTCAGAGGTTTGGGGGACACAGGGTAGCACAGCCCACACGTaGAGCTCCGGACTTGGCTCCACGGTGACCTTCCGCCGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVSEVWGTQGSTAHT*SSGLGSTVTFRRIL Trigger: CAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTCCGGAGCTCCACGTGTGGGCTGTGCTACCCTGTGTCCCCCAAACCTCTGAGACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 90 bp | AGAGGTCAGCAGAGGCGGTGGAACTGCAGTGGTGGCGGCAGCAGCTaGGCAGTTGACAAGCCAAAGCTGCAGGGAAGGCAAGCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGQQRRWNCSGGGSS*AVDKPKLQGRQACQ Trigger: CTGGCAGGCTTGCCTTCCCTGCAGCTTTGGCTTGTCAACTGCTCAGCTGCTGCCGCCACCACTGCAGTTCCACCGCCTCTGCTGACCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS TCA 90 bp | AGGGTAGCACAGCCCACACGTGGAGCTCCGGACTTGGCTCCACGGTaGCCTTCCGCCGGATCTTGTACATGGAGAGGTGCTTCTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVAQPTRGAPDLAPR*PSAGSCTWRGASVG Trigger: CCCTACAGAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTCCGGAGCTCCACGTGTGGGCTGTGCTACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 90 bp | CTTGGCTCCACGGTGACCTTCCGCCGGATCTTGTACATGGAGAGGTaGTTCTGTAGGGCGCCCAGCACGGAGCTGTCACACTCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGSTVTFRRILYMER*FCRAPSTELSHSRR Trigger: TCTCCTGGAGTGTGACAGCTCCGTGCTGGGCGCCCTACAGAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | GCTGTGGGCCACCAGTCCGGCACCACGGCAGTCACAGCCACCAACTaGCTCTCGGAGGTCTTGATGTGGAGAGGACCCTTGATTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVGHQSGTTAVTATN*LSEVLMWRGPLIVS Trigger: AGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAGTTGGTGGCTGTGACTGCCGTGGTGCCGGACTGGTGGCCCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 90 bp | CTGGCTCTCGGAGGTCTTGATGTGGAGAGGACCCTTGATTGTCTCTaGCCGCAGCAAAGCCAGTCCCACGTGTCCCTGGCCAGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LALGGLDVERTLDCL*PQQSQSHVSLASPE Trigger: TTCAGGGCTGGCCAGGGACACGTGGGACTGGCTTTGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 90 bp | ACTGCAGTGGTGGCGGCAGCAGCTGAGCAGTTGACAAGCCAAAGCTaGAGGGAAGGCAAGCCTGCCAGCTGTCTGACAGCTGAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: TAVVAAAAEQLTSQS*REGKPASCLTAEAT Trigger: TGTCGCTTCAGCTGTCAGACAGCTGGCAGGCTTGCCTTCCCTGCAGCTTTGGCTTGTCAACTGCTCAGCTGCTGCCGCCACCACTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS CCA 90 bp | GTGGTGCCTTCTACCCTCTCTTCTAGAGGTGCAGTCTCAGAGGTTTaGGGGACACAGGGTAGCACAGCCCACACGTGGAGCTCCGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VVPSTLSSRGAVSEV*GTQGSTAHTWSSGL Trigger: AAGTCCGGAGCTCCACGTGTGGGCTGTGCTACCCTGTGTCCCCCAAACCTCTGAGACTGCACCTCTAGAAGAGAGGGTAGAAGGCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | ACCACGGCAGTCACAGCCACCAACTGGCTCTCGGAGGTCTTGATGTaGAGAGGACCCTTGATTGTCTCTGACCGCAGCAAAGCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTAVTATNWLSEVLM*RGPLIVSDRSKASP Trigger: GGGACTGGCTTTGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAGTTGGTGGCTGTGACTGCCGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | GCTGTCACACTCCAGGAGAAAGCTTGGTGCCCCCTCCGTACACTCTaGGAGTCCATACAGAATGACGTCATAGAGCGTGCGTCCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVTLQEKAWCPLRTL*ESIQNDVIERASLH Trigger: GTGCAGGGACGCACGCTCTATGACGTCATTCTGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAGTGTGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS-3UTR CAA 90 bp | AACCCAGGGGATCCAACCTCCCGACCCTGCACACAACCTATACAATCTCTGCCCACTGGGAAGAGGCGCTaGCGGATGACACCTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: NPGDPTSRPCTQPIQSLPTGKRR*RMTPVW Trigger: CCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGT...GGGCAGAGATTGTATAGGTTGTGTGCAGGGTCGGGAGGTTGGATCCCCTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 90 bp | CTGGGGCGATACAAACAGGCTGTGAAGGCTCACTTAGTGAGGTTGTaGGAAGACTTTCCTGAGCTTTGCCCCAGTGTGGGAGCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRYKQAVKAHLVRL*EDFPELCPSVGAAG Trigger: GCCTGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGCCTTCACAGCCTGTTTGTATCGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS TCA 90 bp | ACAGGCTGTGAAGGCTCACTTAGTGAGGTTGTGGGAAGACTTTCCTaGGCTTTGCCCCAGTGTGGGAGCAGCAGGCCCGAGAAAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGCEGSLSEVVGRLS*ALPQCGSSRPEKRL Trigger: AAGCCTTTTCTCGGGCCTGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGCCTTCACAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS-3UTR CAA 90 bp | CCTGCACAGCCTATGTGTGTGCTTCAAGTATTGTGCTTTGGTTGTGAACCGTCCACACCGTCCGCGGGGTaGCTGCCAAGAAGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAQPMCVLQVLCFGCEPSTPSAG*LPRRPK Trigger: CTTTGGCCTTCTTGGCAGCAACCCCGCGGACGGTGT...GGACGGTTCACAACCAAAGCACAATACTTGAAGCACACACATAGGCTGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS TCA 90 bp | GAAAGCTTGGTGCCCCCTCCGTACACTCTGGGAGTCCATACAGAATaGCGTCATAGAGCGTGCGTCCCTGCACATTCAGGAAATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESLVPPPYTLGVHTE*RHRACVPAHSGNGH Trigger: ATGCCCATTTCCTGAATGTGCAGGGACGCACGCTCTATGACGTCATTCTGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS TCA 90 bp | CAGCTGAAGCGACAGCTGAGCAGTTCAACAACAGCCCATACAGAATaGCGTCATAGAGCGTGCGTCCCTGCACATTCAGGAAATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLKRQLSSSTTAHTE*RHRACVPAHSGNGH Trigger: ATGCCCATTTCCTGAATGTGCAGGGACGCACGCTCTATGACGTCATTCTGTATGGGCTGTTGTTGAACTGCTCAGCTGTCGCTTCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137433.2 |
||
| CDS-3UTR CAA 90 bp | GTATGTGATACCCTCCTTTTGTCCTCTCTAGGCACCCAGACATTCATCCATAAAACTCCAGGAGAAAGCTaGGTGCCCCCTCCGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: VCDTLLLSSLGTQTFIHKTPGES*VPPPYT Trigger: AGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAGT...TTTATGGATGAATGTCTGGGTGCCTAGAGAGGACAAAAGGAGGGTATCACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CAA 90 bp | TTGCAACCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGCTCACTTAGTGAGGTaGTGGGAAGACTTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQPLSIWPNGQQLPGSLEAHLVR*WEDFPE Trigger: CTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGC...TTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGGTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
||
| CDS-3UTR CAA 90 bp | ACAAACAACAAAGAATACTGCTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATTGGCTCTCGGAGGTCTaGATGTGGAGAGGACCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNNKEYCCSCRGYKFSSHWLSEV*MWRGPL Trigger: CAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCA...ATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
||
| CDS-3UTR CAA 90 bp | ACAAACAACAAAGAATACTGCTGCTCTTGCAGGGGATACAAGTTCAGTTCCCATACCTTCCGCCGGATCTaGTACATGGAGAGGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TNNKEYCCSCRGYKFSSHTFRRI*YMERCF Trigger: GAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGT...ATGGGAACTGAACTTGTATCCCCTGCAAGAGCAGCAGTATTCTTTGTTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS-3UTR CAA 90 bp | TTGCAACCACTTTCAATTTGGCCAAATGGACAGCAGCTCCCTGGTAGCCTAGAAGCTGAAGCACCCATCTaGAAAATAACTCCAGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: LQPLSIWPNGQQLPGSLEAEAPI*KITPEA Trigger: AGCTTCTGGAGTTATTTTCAAGATGGGTGCTTCAGC...TTCTAGGCTACCAGGGAGCTGCTGTCCATTTGGCCAAATTGAAAGTGGTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS GCA 72 bp | CGGTCCCGCTCAGCCGCCAGTGCCAAGCTGGGCTTCTaGGCCCCACAGCCGCGCCCCGAAGCAGCGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: RSRSAASAKLGF*APQPRPEAAPP Trigger: CGGTGGCGCTGCTTCGGGGCGCGGCTGTGGGGCGCAGAAGCCCAGCTTGGCACTGGCGGCTGAGCGGGACCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054523.6 ENSMUST00000137433.2 |
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| CDS CCA 72 bp | GTGACTCGCGGTCCCGCTCAGCCGCCAGTGCCAAGCTaGGCTTCTGCGCCCCACAGCCGCGCCCCGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VTRGPAQPPVPS*ASAPHSRAPKQ Trigger: CTGCTTCGGGGCGCGGCTGTGGGGCGCAGAAGCCCAGCTTGGCACTGGCGGCTGAGCGGGACCGCGAGTCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054523.6 ENSMUST00000137433.2 |
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| CDS GCA 72 bp | TCCCACGTGTCCCTGGCCAGCCCTGAACTTGCCCGCTaGCTGGCCTGTGGCAGTCACCGTCACTATGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SHVSLASPELAR*LACGSHRHYGA Trigger: GGCGCCATAGTGACGGTGACTGCCACAGGCCAGGCAGCGGGCAAGTTCAGGGCTGGCCAGGGACACGTGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 72 bp | AGCTGTCCCCTGGGCACCAGGGCTGGGCCATCATCCTaGGTGAGAAGCCGCCACCCCATACGTGCAGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SCPLGTRAGPSS*VRSRHPIRAVR Trigger: CCGGACTGCACGTATGGGGTGGCGGCTTCTCACCCAGGATGATGGCCCAGCCCTGGTGCCCAGGGGACAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 72 bp | TTGCTGCCAAGAAGGCCAAAGCCACGGGCTAGGCAGTaGCTCGCGGTCCCGCTCAGCCGCCAGTGCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLPRRPKPRARQ*LAVPLSRQCQA Trigger: AGCTTGGCACTGGCGGCTGAGCGGGACCGCGAGTCACTGCCTAGCCCGTGGCTTTGGCCTTCTTGGCAGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054523.6 ENSMUST00000137433.2 |
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| CDS CCA 72 bp | GAGGTTTGGGGGACACAGGGTAGCACAGCCCACACGTaGAGCTCCGGACTTGGCTCCACGGTGACCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: EVWGTQGSTAHT*SSGLGSTVTFR Trigger: GCGGAAGGTCACCGTGGAGCCAAGTCCGGAGCTCCACGTGTGGGCTGTGCTACCCTGTGTCCCCCAAACCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 72 bp | GGCAGGGGGCCTTCAAGCTTCACTGGGAAGAGGCGCTaGCGGATGACACCTGTATGGTGGGTCCGGGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: GRGPSSFTGKRR*RMTPVWWVRAV Trigger: GACGGCCCGGACCCACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 90 bp | CCACTTGCAGGCAGGGGGCCTTCAAGCTTCACTGGGAAGAGGCGCTaGCGGATGACACCTGTATGGTGGGTCCGGGCCGTCAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLAGRGPSSFTGKRR*RMTPVWWVRAVSSC Trigger: GCAGGAGCTGACGGCCCGGACCCACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCCTGCAAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 72 bp | GCCATCATCCTGGGTGAGAAGCCGCCACCCCATACGTaGAGTCCGGGGGTCACGGATAAGCATGGTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AIILGEKPPPHT*SPGVTDKHGGA Trigger: GGCACCACCATGCTTATCCGTGACCCCCGGACTGCACGTATGGGGTGGCGGCTTCTCACCCAGGATGATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 90 bp | ACGTGGAGCTCCGGACTTGGCTCCACGGTGACCTTCCGCCGGATCTaGTACATGGAGAGGTGCTTCTGTAGGGCGCCCAGCACGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TWSSGLGSTVTFRRI*YMERCFCRAPSTEL Trigger: CAGCTCCGTGCTGGGCGCCCTACAGAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTCCGGAGCTCCACGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 72 bp | CAGCCCACACGTGGAGCTCCGGACTTGGCTCCACGGTaGCCTTCCGCCGGATCTTGTACATGGAGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QPTRGAPDLAPR*PSAGSCTWRGA Trigger: AGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTCCGGAGCTCCACGTGTGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 72 bp | GGCCTTCAAGCTTCACTGGGAAGAGGCGCTTGCGGATaGCACCTGTATGGTGGGTCCGGGCCGTCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GLQASLGRGACG*HLYGGSGPSAP Trigger: AGGAGCTGACGGCCCGGACCCACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 72 bp | TCCGGACTTGGCTCCACGGTGACCTTCCGCCGGATCTaGTACATGGAGAGGTGCTTCTGTAGGGCGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGLGSTVTFRRI*YMERCFCRAPS Trigger: GCTGGGCGCCCTACAGAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGTGGAGCCAAGTCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 72 bp | GTGGCGGCAGCAGCTGAGCAGTTGACAAGCCAAAGCTaGAGGGAAGGCAAGCCTGCCAGCTGTCTGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: VAAAAEQLTSQS*REGKPASCLTA Trigger: AGCTGTCAGACAGCTGGCAGGCTTGCCTTCCCTGCAGCTTTGGCTTGTCAACTGCTCAGCTGCTGCCGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS GCA 72 bp | ACGGTGACCTTCCGCCGGATCTTGTACATGGAGAGGTaGTTCTGTAGGGCGCCCAGCACGGAGCTGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: TVTFRRILYMER*FCRAPSTELSH Trigger: GTGTGACAGCTCCGTGCTGGGCGCCCTACAGAAGCACCTCTCCATGTACAAGATCCGGCGGAAGGTCACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 72 bp | GCCCAGCACGGAGCTGTCACACTCCAGGAGAAAGCTTaGTGCCCCCTCCGTACACTCTGGGAGTCCATACAG | + |
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Preference number: 6 (lower is better) Translates to: AQHGAVTLQEKA*CPLRTLWESIQ Trigger: CTGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAGTGTGACAGCTCCGTGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 72 bp | GACGCCACTTGCAGGCAGGGGGCCTTCAAGCTTCACTaGGAAGAGGCGCTTGCGGATGACACCTGTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: DATCRQGAFKLH*EEALADDTCMV Trigger: CACCATACAGGTGTCATCCGCAAGCGCCTCTTCCCAGTGAAGCTTGAAGGCCCCCTGCCTGCAAGTGGCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 72 bp | CGCCCAGCACGGAGCTGTCACACTCCAGGAGAAAGCTaGGTGCCCCCTCCGTACACTCTGGGAGTCCATACA | + |
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Preference number: 6 (lower is better) Translates to: RPARSCHTPGES*VPPPYTLGVHT Trigger: TGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAGTGTGACAGCTCCGTGCTGGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 90 bp | TCCGGCACCACGGCAGTCACAGCCACCAACTGGCTCTCGGAGGTCTaGATGTGGAGAGGACCCTTGATTGTCTCTGACCGCAGCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SGTTAVTATNWLSEV*MWRGPLIVSDRSKA Trigger: GGCTTTGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAGTTGGTGGCTGTGACTGCCGTGGTGCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 72 bp | GGAGGTCTTGATGTGGAGAGGACCCTTGATTGTCTCTaGCCGCAGCAAAGCCAGTCCCACGTGTCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GGLDVERTLDCL*PQQSQSHVSLA Trigger: GGCCAGGGACACGTGGGACTGGCTTTGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 72 bp | ACGGCAGTCACAGCCACCAACTGGCTCTCGGAGGTCTaGATGTGGAGAGGACCCTTGATTGTCTCTGACCGC | + |
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Preference number: 6 (lower is better) Translates to: TAVTATNWLSEV*MWRGPLIVSDR Trigger: GCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAGTTGGTGGCTGTGACTGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS TCA 72 bp | GTGCCCCCTCCGTACACTCTGGGAGTCCATACAGAATaGCGTCATAGAGCGTGCGTCCCTGCACATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VPPPYTLGVHTE*RHRACVPAHSG Trigger: TCCTGAATGTGCAGGGACGCACGCTCTATGACGTCATTCTGTATGGACTCCCAGAGTGTACGGAGGGGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS GCA 72 bp | CACTTAGTGAGGTTGTGGGAAGACTTTCCTGAGCTTTaGCCCAGTGTGGGAGCAGCAGGCCCGAGAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HLVRLWEDFPEL*PSVGAAGPRKG Trigger: GCCTTTTCTCGGGCCTGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS GCA 72 bp | CAGCACGGAGCTGTCACACTCCAGGAGAAAGCTTGGTaGCCCCTCCGTACACTCTGGGAGTCCATACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QHGAVTLQEKAW*PLRTLWESIQN Trigger: ATTCTGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAGTGTGACAGCTCCGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 72 bp | GGTTGTGGGAAGACTTTCCTGAGCTTTGCCCCAGTGTaGGAGCAGCAGGCCCGAGAAAAGGCTTCTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GCGKTFLSFAPV*EQQAREKASLH Trigger: ATGGAGAGAAGCCTTTTCTCGGGCCTGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS CCA 72 bp | CTCCAGGAGAAAGCTTGGTGCCCCCTCCGTACACTCTaGGAGTCCATACAGAATGACGTCATAGAGCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LQEKAWCPLRTL*ESIQNDVIERA Trigger: CGCACGCTCTATGACGTCATTCTGTATGGACTCCCAGAGTGTACGGAGGGGGCACCAAGCTTTCTCCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CCA 72 bp | GTCACAGCCACCAACTGGCTCTCGGAGGTCTTGATGTaGAGAGGACCCTTGATTGTCTCTGACCGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VTATNWLSEVLM*RGPLIVSDRSK Trigger: TTTGCTGCGGTCAGAGACAATCAAGGGTCCTCTCCACATCAAGACCTCCGAGAGCCAGTTGGTGGCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054523.6 |
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| CDS CAA 90 bp | TTTCTGGGGCGATACAAACAGGCTGTGAAGGCTCACTTAGTGAGGTaGTGGGAAGACTTTCCTGAGCTTTGCCCCAGTGTGGGAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLGRYKQAVKAHLVR*WEDFPELCPSVGAA Trigger: TGCTGCTCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGCCTTCACAGCCTGTTTGTATCGCCCCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS TCA 72 bp | CGACAGCTGAGCAGTTCAACAACAGCCCATACAGAATaGCGTCATAGAGCGTGCGTCCCTGCACATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RQLSSSTTAHTE*RHRACVPAHSG Trigger: TCCTGAATGTGCAGGGACGCACGCTCTATGACGTCATTCTGTATGGGCTGTTGTTGAACTGCTCAGCTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137433.2 |
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| CDS CAA 72 bp | GCACCCATCTTGAAAATAACTCCAGAAGCTTCTGACTaGACTGGTTGGGGTCCCAGGCACAACGCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: APILKITPEASD*TGWGPRHNALC Trigger: GCACAGAGCGTTGTGCCTGGGACCCCAACCAGTCAAGTCAGAAGCTTCTGGAGTTATTTTCAAGATGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069631.3 |
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| CDS CCA 72 bp | TACAAACAGGCTGTGAAGGCTCACTTAGTGAGGTTGTaGGAAGACTTTCCTGAGCTTTGCCCCAGTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: YKQAVKAHLVRL*EDFPELCPSVG Trigger: TCCCACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGCCTTCACAGCCTGTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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| CDS CAA 72 bp | CGATACAAACAGGCTGTGAAGGCTCACTTAGTGAGGTaGTGGGAAGACTTTCCTGAGCTTTGCCCCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RYKQAVKAHLVR*WEDFPELCPSV Trigger: CACACTGGGGCAAAGCTCAGGAAAGTCTTCCCACAACCTCACTAAGTGAGCCTTCACAGCCTGTTTGTATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069631.3 ENSMUST00000137433.2 |
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