Pregenerated sensors for IARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026618Ensembl transcript IDs: ENSMUST00000027921.11, ENSMUST00000110974.4, ENSMUST00000110975.8
Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGCTTCGGTTTCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTaGCGGCAGCCAATCACCCGGGCTCTGCTATCAGCAGCATGTGCT | + |
Preference number: 1 (lower is better) Translates to: LLRFPSGKTQAVGQL*RQPITRALLSAACA Trigger: AGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATGGAAACCGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 90 bp | CCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTaGTATCAGCAGCATGTGCTATTTAGCCGAGAAGCAGGAAGCACT | + |
Preference number: 1 (lower is better) Translates to: PRQWGSSDGSQSPGL*YQQHVLFSREAGST Trigger: AGTGCTTCCTGCTTCTCGGCTAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 90 bp | ATCCTTGACACAGTCCTGAGTAGGTCCACTTGCCCCAGGACCTTCTaGAGCACTCTGGAAGGCACAGGATGTGGGCAGCTTGCCAGGAAA | + |
Preference number: 1 (lower is better) Translates to: ILDTVLSRSTCPRTF*STLEGTGCGQLARK Trigger: TTTCCTGGCAAGCTGCCCACATCCTGTGCCTTCCAGAGTGCTGCAGAAGGTCCTGGGGCAAGTGGACCTACTCAGGACTGTGTCAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | CCTGTAGTGCCTAGAGCAGTCCAAGTGCTGACAAGTGTGAGGAAATaGACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGT | + |
Preference number: 1 (lower is better) Translates to: PVVPRAVQVLTSVRK*TALCRSASPGCSSS Trigger: ACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCTCTAGGCACTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | CACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATaGGCAGGCTGTAGAGGCAGCAGGCAACGATTTAGGATGCTTTCT | + |
Preference number: 1 (lower is better) Translates to: HGGASEGRACSHQVQ*AGCRGSRQRFRMLS Trigger: AGAAAGCATCCTAAATCGTTGCCTGCTGCCTCTACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 90 bp | GAACTTTGTACTCAGAGGCCTTATCTGTCACGCATTCCGTGTTCCTaGTTCGGTTTCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTCT | + |
Preference number: 1 (lower is better) Translates to: ELCTQRPYLSRIPCS*FGFHQGKPRQWGSS Trigger: AGAGCTGCCCCACTGCCTGGGTTTTCCCTGATGGAAACCGAAGCAGGAACACGGAATGCGTGACAGATAAGGCCTCTGAGTACAAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CCA 90 bp | CTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTaGCCTCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTG | + |
Preference number: 1 (lower is better) Translates to: LCVPWLSWYSLCRPG*PQTPRDLPTSTSLV Trigger: CACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGAGGCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR TCA 90 bp | TCAAATCTTCAGAGAAAAATGTTTCCGATGTTGCTCGGGTGGCTCTaGGGAGCAGCCAGCTTGTGCGGGAATCCCTGCAATCACAGCTTG | + |
Preference number: 1 (lower is better) Translates to: SNLQRKMFPMLLGWL*GAASLCGNPCNHSL Trigger: CAAGCTGTGATTGCAGGGATTCCCGCACAAGCTGGCTGCTCCTCAGAGCCACCCGAGCAACATCGGAAACATTTTTCTCTGAAGATTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | CTGACTGTCAGGTTTCAAATCTTCAGAGAAAAATGTTTCCGATGTTaGTCGGGTGGCTCTGAGGAGCAGCCAGCTTGTGCGGGAATCCCT | + |
Preference number: 1 (lower is better) Translates to: LTVRFQIFREKCFRC*SGGSEEQPACAGIP Trigger: AGGGATTCCCGCACAAGCTGGCTGCTCCTCAGAGCCACCCGAGCAACATCGGAAACATTTTTCTCTGAAGATTTGAAACCTGACAGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | TCTTCCAAGTGTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTaGCTGTCCGGGAACAGGATGGGGCACTTTGTGCTGTCACAGCCT | + |
Preference number: 1 (lower is better) Translates to: SSKCSKLSVSGTWSC*LSGNRMGHFVLSQP Trigger: AGGCTGTGACAGCACAAAGTGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACACTTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | AAGTCCAATGCGCAGGCTGTAGAGGCAGCAGGCAACGATTTAGGATaGTTTCTTTACTTACTGAACATAAAGTCCACAGGTTTCCAGAGG | + |
Preference number: 1 (lower is better) Translates to: KSNAQAVEAAGNDLG*FLYLLNIKSTGFQR Trigger: CCTCTGGAAACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGCTGCCTCTACAGCCTGCGCATTGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CCA 90 bp | ATTTTGTTTTTCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTaGTACTCTCTTTGTAGACCAGGCTGGCCTCAAACTCCCAGAGAT | + |
Preference number: 1 (lower is better) Translates to: ILFFKTGFLCVPWLS*YSLCRPGWPQTPRD Trigger: ATCTCTGGGAGTTTGAGGCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAAAAACAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR GCA 90 bp | TGCAGAATCCCACGCTTCGTCATCCACAGCTTCTTCACCATCATATaGTGGGAGTTTCCCAGAATGCCTTTATTTTCAGATATCATAGAG | + |
Preference number: 1 (lower is better) Translates to: CRIPRFVIHSFFTII*WEFPRMPLFSDIIE Trigger: CTCTATGATATCTGAAAATAAAGGCATTCTGGGAAACTCCCAGCATATGATGGTGAAGAAGCTGTGGATGACGAAGCGTGGGATTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | AATAACAATTTGGTGATGCTCTTTGTAGTACACTCAGAGTCCTGCTaGTTTAGAAACTTGGTGTTTGCTAGTGGGCAGAAGGAACTGACC | + |
Preference number: 1 (lower is better) Translates to: NNNLVMLFVVHSESC*FRNLVFASGQKELT Trigger: GGTCAGTTCCTTCTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTACAAAGAGCATCACCAAATTGTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CCA 90 bp | AGAATCCCACGCTTCGTCATCCACAGCTTCTTCACCATCATATGCTaGGAGTTTCCCAGAATGCCTTTATTTTCAGATATCATAGAGCTT | + |
Preference number: 1 (lower is better) Translates to: RIPRFVIHSFFTIIC*EFPRMPLFSDIIEL Trigger: AAGCTCTATGATATCTGAAAATAAAGGCATTCTGGGAAACTCCCAGCATATGATGGTGAAGAAGCTGTGGATGACGAAGCGTGGGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 90 bp | TTGAATAACAATTTGGTGATGCTCTTTGTAGTACACTCAGAGTCCTaGTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAGAAGGAACTG | + |
Preference number: 1 (lower is better) Translates to: LNNNLVMLFVVHSES*CFRNLVFASGQKEL Trigger: CAGTTCCTTCTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTACAAAGAGCATCACCAAATTGTTATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CCA 90 bp | ACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTaGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACAAATTA | + |
Preference number: 1 (lower is better) Translates to: TSTSLVLRLKACTTV*LTCTFLSVTVLNKL Trigger: TAATTTGTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR-3UTR GCA 90 bp | AGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTTCCCACCAAGTCCAATaGGCAGGCTGTAGAGGCAGC | + |
Preference number: 2 (lower is better) Translates to: RENPGSGAALTAANHPGSSHQVQ*AGCRGS Trigger: GCTGCCTCTACAGCCTGCGCATTGGACTTGGTGGGA...AGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR-3UTR TCA 90 bp | CAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAACTAGCTTCTACTTCTCTGAAGAAGTCATaGGTGTGTGTGTGTGTGTGC | + |
Preference number: 2 (lower is better) Translates to: QSTPFHLTGWSAGQLASTSLKKS*VCVCVC Trigger: GCACACACACACACACACTCATGACTTCTTCAGAGA...AGTAGAAGCTAGTTGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR TCA 90 bp | AGGAAGCACTCAGGACTTCCAGGTAAGGAGCCGCTGCTGTCCTCTTGGTCCTCTGATCTCTGCTGGAAGTaGCCGTGGAAAGAACGAGGT | + |
Preference number: 2 (lower is better) Translates to: RKHSGLPGKEPLLSSWSSDLCWK*PWKERG Trigger: ACCTCGTTCTTTCCACGGTCACTTCCAGCAGAGATC...AGAGGACCAAGAGGACAGCAGCGGCTCCTTACCTGGAAGTCCTGAGTGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CAA 90 bp | GCATACCTACCTCAGCTAGGTGGAGAAGATGAGCCTCGGCTAGTGTaGGACCCTGTAGTGCCTAGAGCAGTCCAAGTGCTGACAAGTGTG | + |
Preference number: 2 (lower is better) Translates to: AYLPQLGGEDEPRLV*DPVVPRAVQVLTSV Trigger: CACACTTGTCAGCACTTGGACTGCTCTAGGCACTACAGGGTCCAACACTAGCCGAGGCTCATCTTCTCCACCTAGCTGAGGTAGGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR TCA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATGACTCCACAACAAAGTaGCAGACACCCAGGCGCACA | + |
Preference number: 2 (lower is better) Translates to: GNALRSADQQALAAVQVYDSTTK*QTPRRT Trigger: TGTGCGCCTGGGTGTCTGTCACTTTGTTGTGGAGTC...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR GCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCGTAGAGGCACACAACTaGCACTCCCTGCAGAATCCC | + |
Preference number: 2 (lower is better) Translates to: MYKWRGREKCSQQYTAPGVEAHN*HSLQNP Trigger: GGGATTCTGCAGGGAGTGGCAGTTGTGTGCCTCTAC...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR GCA 90 bp | TCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCAACGATTTAGGATaGTTTCTTTACTTACTGAAC | + |
Preference number: 2 (lower is better) Translates to: SIRENPGSGAALTAANHPGNDLG*FLYLLN Trigger: GTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCC...CGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CAA 90 bp | TTCTTCCAAGTGTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTaGCCTGTCCGGGAACAGGATGGGGCACTTTGTGCTGTCACAGCC | + |
Preference number: 2 (lower is better) Translates to: FFQVFKTVCFWDLVM*PVREQDGALCAVTA Trigger: GGCTGTGACAGCACAAAGTGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACACTTGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR TCA 90 bp | GAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATCTTCAGTGTCTGTCTCTaGAGAAGTCATGAGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: EMHCALQISKPWLQFKCIFSVCL*RSHECV Trigger: CACACACTCATGACTTCTTCAGAGACAGACACTGAA...GATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR GCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCCTGCTACCATCTATCTaGCCCTCTACTTTCTGTGTA | + |
Preference number: 2 (lower is better) Translates to: MYKWRGREKCSQQYTAPGLLPSI*PSTFCV Trigger: TACACAGAAAGTAGAGGGGCAGATAGATGGTAGCAG...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR GCA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAGTACACTCAGAGTCCTaGTGCTTTAGAAACTTGGTG | + |
Preference number: 2 (lower is better) Translates to: SNTRWCPATRAWHVLETLVHSES*CFRNLV Trigger: CACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTAC...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR CCA 90 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTGCGCTCTGCAGATCAGCGCTGCTTTAGAAACTTaGTGTTTGCTAGTGGGCAGA | + |
Preference number: 2 (lower is better) Translates to: SSPSADKCEEMHCALQISAALET*CLLVGR Trigger: TCTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGC...GCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR CCA 90 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTGCGCTCTGCAGATCAGCTATTGCTGTCTGCCATaGTCATGGTTGCTCACAGTA | + |
Preference number: 2 (lower is better) Translates to: SSPSADKCEEMHCALQISYCCLP*SWLLTV Trigger: TACTGTGAGCAACCATGACCATGGCAGACAGCAATA...GCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR GCA 90 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTGCGCTCTGCAGATCAGCAACAATATCTTACAGTaGACACACAGCAGCAGCAGA | + |
Preference number: 2 (lower is better) Translates to: SSPSADKCEEMHCALQISNNILQ*THSSSR Trigger: TCTGCTGCTGCTGTGTGTGCACTGTAAGATATTGTT...GCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CAA 90 bp | GCTGCAGTTCAAGTGTATCTGGAATGTAGCCATATAGTGCAATTATaGCTGTCTGCCATGGTCATGGTTGCTCACAGTACGTGTACCATA | + |
Preference number: 2 (lower is better) Translates to: AAVQVYLECSHIVQL*LSAMVMVAHSTCTI Trigger: TATGGTACACGTACTGTGAGCAACCATGACCATGGCAGACAGCAATAATTGCACTATATGGCTACATTCCAGATACACTTGAACTGCAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CAA 90 bp | TTCATACCCGTAGGAACACAGAGATTTCTCCTCTTGAATAACAATTaGGTGATGCTCTTTGTAGTACACTCAGAGTCCTGCTGCTTTAGA | + |
Preference number: 2 (lower is better) Translates to: FIPVGTQRFLLLNNN*VMLFVVHSESCCFR Trigger: TCTAAAGCAGCAGGACTCTGAGTGTACTACAAAGAGCATCACCAAATTGTTATTCAAGAGGAGAAATCTCTGTGTTCCTACGGGTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR CCA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGTTCACCATCATATGCTaGGAGTTTCCCAGAATGCCT | + |
Preference number: 2 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRFTIIC*EFPRMP Trigger: AGGCATTCTGGGAAACTCCCAGCATATGATGGTGAA...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR CAA 90 bp | CATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGGCCGCTGCTGTCCTCTaGGTCCTCTGTTCTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: HQGKPRQWGSSDGSQSPGAAAVL*VLCSLF Trigger: AAAGAGAGAACAGAGGACCAAGAGGACAGCAGCGGC...CCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR TCA 72 bp | TTTCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTaGCGGCAGCCAATCACCCGGGCTCTGCTATCAGCA | + |
Preference number: 3 (lower is better) Translates to: FPSGKTQAVGQL*RQPITRALLSA Trigger: TGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CCA 72 bp | CAGGACCTTCTGCAGCACTCTGGAAGGCACAGGATGTaGGCAGCTTGCCAGGAAAGCCTCCTGCTGCAAGCA | + |
Preference number: 3 (lower is better) Translates to: QDLLQHSGRHRM*AACQESLLLQA Trigger: TGCTTGCAGCAGGAGGCTTTCCTGGCAAGCTGCCCACATCCTGTGCCTTCCAGAGTGCTGCAGAAGGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | ACAGTCCTGAGTAGGTCCACTTGCCCCAGGACCTTCTaGAGCACTCTGGAAGGCACAGGATGTGGGCAGCTT | + |
Preference number: 3 (lower is better) Translates to: TVLSRSTCPRTF*STLEGTGCGQL Trigger: AAGCTGCCCACATCCTGTGCCTTCCAGAGTGCTGCAGAAGGTCCTGGGGCAAGTGGACCTACTCAGGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | TGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTaGTATCAGCAGCATGTGCTATTTAGCCGAGAAGCA | + |
Preference number: 3 (lower is better) Translates to: WGSSDGSQSPGL*YQQHVLFSREA Trigger: TGCTTCTCGGCTAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 72 bp | CCTAGAGCAGTCCAAGTGCTGACAAGTGTGAGGAAATaGACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGC | + |
Preference number: 3 (lower is better) Translates to: PRAVQVLTSVRK*TALCRSASPGC Trigger: GCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCTCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR-3UTR CAA 90 bp | CAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAACTAGCTTCTACTTGCTGCTTTAGAAACTaGGTGTTTGCTAGTGGGCAG | + |
Preference number: 3 (lower is better) Translates to: QSTPFHLTGWSAGQLASTCCFRN*VFASGQ Trigger: CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCA...AGTAGAAGCTAGTTGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTaGGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTC | + |
Preference number: 3 (lower is better) Translates to: SSPSADKCEEMH*ALQISKPWLQF Trigger: GAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | GCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATaGGCAGGCTGTAGAGGCAGCAGGCAACGATTTAGG | + |
Preference number: 3 (lower is better) Translates to: ASEGRACSHQVQ*AGCRGSRQRFR Trigger: CCTAAATCGTTGCCTGCTGCCTCTACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 72 bp | GCAGCCAATCACCCGGGCTCTGCTATCAGCAGCATGTaGTATTTAGCCGAGAAGCAGGAAGCACTCAGGACT | + |
Preference number: 3 (lower is better) Translates to: AANHPGSAISSM*YLAEKQEALRT Trigger: AGTCCTGAGTGCTTCCTGCTTCTCGGCTAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR GCA 72 bp | ACTCAGAGGCCTTATCTGTCACGCATTCCGTGTTCCTaGTTCGGTTTCCATCAGGGAAAACCCAGGCAGTGG | + |
Preference number: 3 (lower is better) Translates to: TQRPYLSRIPCS*FGFHQGKPRQW Trigger: CCACTGCCTGGGTTTTCCCTGATGGAAACCGAAGCAGGAACACGGAATGCGTGACAGATAAGGCCTCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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3UTR CCA 72 bp | CCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTaGCCTCAAACTCCCAGAGATCTGCCTACTTCTACC | + |
Preference number: 3 (lower is better) Translates to: PWLSWYSLCRPG*PQTPRDLPTST Trigger: GGTAGAAGTAGGCAGATCTCTGGGAGTTTGAGGCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR GCA 72 bp | TGTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTaGCTGTCCGGGAACAGGATGGGGCACTTTGTGCTG | + |
Preference number: 3 (lower is better) Translates to: CSKLSVSGTWSC*LSGNRMGHFVL Trigger: CAGCACAAAGTGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CCA 72 bp | TCTTCCAAGTGTTCAAAACTGTCTGTTTCTGGGACTTaGTCATGTTGCCTGTCCGGGAACAGGATGGGGCAC | + |
Preference number: 3 (lower is better) Translates to: SSKCSKLSVSGT*SCCLSGNRMGH Trigger: GTGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACACTTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | AGGTTTCAAATCTTCAGAGAAAAATGTTTCCGATGTTaGTCGGGTGGCTCTGAGGAGCAGCCAGCTTGTGCG | + |
Preference number: 3 (lower is better) Translates to: RFQIFREKCFRC*SGGSEEQPACA Trigger: CGCACAAGCTGGCTGCTCCTCAGAGCCACCCGAGCAACATCGGAAACATTTTTCTCTGAAGATTTGAAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
3UTR CCA 72 bp | TTCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTaGTACTCTCTTTGTAGACCAGGCTGGCCTCAAACT | + |
Preference number: 3 (lower is better) Translates to: FKTGFLCVPWLS*YSLCRPGWPQT Trigger: AGTTTGAGGCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
3UTR GCA 72 bp | GCGCAGGCTGTAGAGGCAGCAGGCAACGATTTAGGATaGTTTCTTTACTTACTGAACATAAAGTCCACAGGT | + |
Preference number: 3 (lower is better) Translates to: AQAVEAAGNDLG*FLYLLNIKSTG Trigger: ACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGCTGCCTCTACAGCCTGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
||
3UTR GCA 72 bp | CCACGCTTCGTCATCCACAGCTTCTTCACCATCATATaGTGGGAGTTTCCCAGAATGCCTTTATTTTCAGAT | + |
Preference number: 3 (lower is better) Translates to: PRFVIHSFFTII*WEFPRMPLFSD Trigger: ATCTGAAAATAAAGGCATTCTGGGAAACTCCCAGCATATGATGGTGAAGAAGCTGTGGATGACGAAGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
3UTR GCA 72 bp | TTGGTGATGCTCTTTGTAGTACACTCAGAGTCCTGCTaGTTTAGAAACTTGGTGTTTGCTAGTGGGCAGAAG | + |
Preference number: 3 (lower is better) Translates to: LVMLFVVHSESC*FRNLVFASGQK Trigger: CTTCTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTACAAAGAGCATCACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
3UTR GCA 72 bp | CCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTaGACTACTGTCTGGCTGACATGTACATTTCTTAGT | + |
Preference number: 3 (lower is better) Translates to: PTSTSLVLRLKA*TTVWLTCTFLS Trigger: ACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
3UTR CCA 72 bp | ATTTTGTTTTTCAAGACAGGGTTTCTTTGTGTGCCATaGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGG | + |
Preference number: 3 (lower is better) Translates to: ILFFKTGFLCVP*LSWYSLCRPGW Trigger: CCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAAAAACAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR TCA 72 bp | TCTAATCAAGGGAAGAAGCCAACTCCATTAGAAGGCTaGGAATACTCTTCAGGGACTCCACAACAAAGTGAC | + |
Preference number: 3 (lower is better) Translates to: SNQGKKPTPLEG*EYSSGTPQQSD Trigger: GTCACTTTGTTGTGGAGTCCCTGAAGAGTATTCTCAGCCTTCTAATGGAGTTGGCTTCTTCCCTTGATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR GCA 72 bp | AATTTGGTGATGCTCTTTGTAGTACACTCAGAGTCCTaGTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAG | + |
Preference number: 3 (lower is better) Translates to: NLVMLFVVHSES*CFRNLVFASGQ Trigger: CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTACAAAGAGCATCACCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
3UTR CCA 72 bp | CGCTTCGTCATCCACAGCTTCTTCACCATCATATGCTaGGAGTTTCCCAGAATGCCTTTATTTTCAGATATC | + |
Preference number: 3 (lower is better) Translates to: RFVIHSFFTIIC*EFPRMPLFSDI Trigger: GATATCTGAAAATAAAGGCATTCTGGGAAACTCCCAGCATATGATGGTGAAGAAGCTGTGGATGACGAAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
3UTR CCA 72 bp | TCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTaGCTGACATGTACATTTCTTAGTGTTACTGTTTTG | + |
Preference number: 3 (lower is better) Translates to: SLVLRLKACTTV*LTCTFLSVTVL Trigger: CAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
3UTR TCA 72 bp | AGTAACCATATTCAGTGTCTGTCTCTGAAGAAGTCATaGGTGTGTGTGTGTGTGTGCCCTGTATATATGTAT | + |
Preference number: 3 (lower is better) Translates to: SNHIQCLSLKKS*VCVCVCPVYMY Trigger: ATACATATATACAGGGCACACACACACACACACTCATGACTTCTTCAGAGACAGACACTGAATATGGTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | CCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTGCTATCAGCCCAGCATGTCCGTCATaGTGTTCAGTGCGGCTCCGG | + |
Preference number: 4 (lower is better) Translates to: PGSGAALTAANHPGSAISPACPS*CSVRLR Trigger: CCGGAGCCGCACTGAACAGCATGACGGACATGCTGG...GCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | CATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGGCTTCATCGGGAAGCTaGTCTGCGGCAGCAGCACCG | + |
Preference number: 4 (lower is better) Translates to: HQGKPRQWGSSDGSQSPGASSGS*SAAAAP Trigger: CGGTGCTGCTGCCGCAGACCAGCTTCCCGATGAAGC...CCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR TCA 90 bp | GGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTGCAGTACAGCCTTGTTCTaGAGTTCAGGGCCTGCGGCA | + |
Preference number: 4 (lower is better) Translates to: GKPRQWGSSDGSQSPGLCSTALF*SSGPAA Trigger: TGCCGCAGGCCCTGAACTTCAGAACAAGGCTGTACT...GCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | TCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGATCGGGAAGCTGGTCTaGGGCAGCAGCACCGTGTCA | + |
Preference number: 4 (lower is better) Translates to: SIRENPGSGAALTAANHPIGKLV*GSSTVS Trigger: TGACACGGTGCTGCTGCCGCAGACCAGCTTCCCGAT...CGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
||
CDS-3UTR GCA 90 bp | CACACAGCAGCAGCAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAGCAGTTATTCCAGTCTaGCATCACTCCCCAGCGGAC | + |
Preference number: 4 (lower is better) Translates to: HTAAAEHALPPHGVECWAAVIPV*HHSPAD Trigger: GTCCGCTGGGGAGTGATGGCAGACTGGAATAACTGC...TGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTGCTGCTGCTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | CACACAGCAGCAGCAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAAAGGGTGACTACAAGTaGCACCTTCCAGATCCACAC | + |
Preference number: 4 (lower is better) Translates to: HTAAAEHALPPHGVECWAKGDYK*HLPDPH Trigger: GTGTGGATCTGGAAGGTGGCACTTGTAGTCACCCTT...TGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTGCTGCTGCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | CACACAGCAGCAGCAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCACAACGACTCCTTAGCTaGAGCCTTGATGTCCGTGAT | + |
Preference number: 4 (lower is better) Translates to: HTAAAEHALPPHGVECWAQRLLS*SLDVRD Trigger: ATCACGGACATCAAGGCTGCAGCTAAGGAGTCGTTG...TGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTGCTGCTGCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCTCTGCCGGGAGAAGCTaGTCAGCAGGGAGGGTCCAC | + |
Preference number: 4 (lower is better) Translates to: MYKWRGREKCSQQYTAPGSAGRS*SAGRVH Trigger: GTGGACCCTCCCTGCTGAGCAGCTTCTCCCGGCAGA...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | CCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTGCTATCAGCACACTTTTGTTTCAATaGGCAAGCCATGGCAATCCC | + |
Preference number: 4 (lower is better) Translates to: PGSGAALTAANHPGSAISTLLFQ*ASHGNP Trigger: GGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGT...GCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR TCA 90 bp | CAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAACTAGCTTCTACTATCTGGCTTTCTCCCTaGTCTCCATGGCTGAAAGAC | + |
Preference number: 4 (lower is better) Translates to: QSTPFHLTGWSAGQLASTIWLSP*SPWLKD Trigger: GTCTTTCAGCCATGGAGATCAGGGAGAAAGCCAGAT...AGTAGAAGCTAGTTGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GGTCCTCTGTTCTCTCTTTATAAGCAAAAGGCACAGGACAGGATCTCTGCTGGATGCCGCCTTTCGAGCTaGTCTGGGGGCTGTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: GPLFSLYKQKAQDRISAGCRLSS*SGGCPP Trigger: GGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCA...TCCAGCAGAGATCCTGTCCTGTGCCTTTTGCTTATAAAGAGAGAACAGAGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATCCAGCATGTCCGTCATaGTGTTCAGTGCGGCTCCGG | + |
Preference number: 4 (lower is better) Translates to: GNALRSADQQALAAVQVYPACPS*CSVRLR Trigger: CCGGAGCCGCACTGAACAGCATGACGGACATGCTGG...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGCCCAGCATGTCCGTCATaGTGTTCAGTGCGGCTCCGG | + |
Preference number: 4 (lower is better) Translates to: GFFVCHGCPGTLFVDQAGPACPS*CSVRLR Trigger: CCGGAGCCGCACTGAACAGCATGACGGACATGCTGG...GCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGCTTCATCGGGAAGCTaGTCTGCGGCAGCAGCACCG | + |
Preference number: 4 (lower is better) Translates to: AYFYLPSAEIKGVHYCLAASSGS*SAAAAP Trigger: CGGTGCTGCTGCCGCAGACCAGCTTCCCGATGAAGC...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR CAA 72 bp | CCTCAGCTAGGTGGAGAAGATGAGCCTCGGCTAGTGTaGGACCCTGTAGTGCCTAGAGCAGTCCAAGTGCTG | + |
Preference number: 4 (lower is better) Translates to: PQLGGEDEPRLV*DPVVPRAVQVL Trigger: CAGCACTTGGACTGCTCTAGGCACTACAGGGTCCAACACTAGCCGAGGCTCATCTTCTCCACCTAGCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCAGGCTGTAGCAGTTATTCCAGTCTaGCATCACTCCCCAGCGGAC | + |
Preference number: 4 (lower is better) Translates to: VELQKEEPVPTKSNAQAVAVIPV*HHSPAD Trigger: GTCCGCTGGGGAGTGATGGCAGACTGGAATAACTGC...TACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | AGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTCACCACAGCATACTTTaGCTCTGGCATATAGCAAAT | + |
Preference number: 4 (lower is better) Translates to: RENPGSGAALTAANHPGSHHSIL*LWHIAN Trigger: ATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTG...AGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTTCTGCCGGGAGAAGCTaGTCAGCAGGGAGGGTCCAC | + |
Preference number: 4 (lower is better) Translates to: STSLVLRLKACTTVWLTCSAGRS*SAGRVH Trigger: GTGGACCCTCCCTGCTGAGCAGCTTCTCCCGGCAGA...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GAACACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCATCAATGGGCAAGCCATaGCAATCCCAGCCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: EHGGASEGRACSHQVQCASMGKP*QSQPGT Trigger: TGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGA...TGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | CTTGTAGAGGCACACAACTGCCACTCCCTGCAGAATCCCACGCTTCGTCATCCATTCCATACCGTGAGCTaGGGCTGTGTGAACCAACCC | + |
Preference number: 4 (lower is better) Translates to: LVEAHNCHSLQNPTLRHPFHTVS*GCVNQP Trigger: GGGTTGGTTCACACAGCCCCAGCTCACGGTATGGAA...TGGATGACGAAGCGTGGGATTCTGCAGGGAGTGGCAGTTGTGTGCCTCTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GCTCTGACGGCAGCCAATCACCCGGGCTCTGCTATCAGCAGCATGTGCTATTTATTCCATACCGTGAGCTaGGGCTGTGTGAACCAACCC | + |
Preference number: 4 (lower is better) Translates to: ALTAANHPGSAISSMCYLFHTVS*GCVNQP Trigger: GGGTTGGTTCACACAGCCCCAGCTCACGGTATGGAA...TAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | CAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAACTAGCTTCTACTGGAGGTTCTTTGCTGTaGTCTTTTCCTCCACTGATG | + |
Preference number: 4 (lower is better) Translates to: QSTPFHLTGWSAGQLASTGGSLL*SFPPLM Trigger: CATCAGTGGAGGAAAAGACCACAGCAAAGAACCTCC...AGTAGAAGCTAGTTGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | CAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCAGGCTGTAGAGGCAGCAATCTGGCTTTCTCCCTaGTCTCCATGGCTGAAAGAC | + |
Preference number: 4 (lower is better) Translates to: QKEEPVPTKSNAQAVEAAIWLSP*SPWLKD Trigger: GTCTTTCAGCCATGGAGATCAGGGAGAAAGCCAGAT...TGCTGCCTCTACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | GGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGCTGAAGTTCAGGGCCTaGGGCATCGGTGAACATTCC | + |
Preference number: 4 (lower is better) Translates to: GFLCVPWLSWYSLCRPGWLKFRA*GIGEHS Trigger: GGAATGTTCACCGATGCCGCAGGCCCTGAACTTCAG...CCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GTAGTACACTCAGAGTCCTGCTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAGGCTTCATCGGGAAGCTaGTCTGCGGCAGCAGCACCG | + |
Preference number: 4 (lower is better) Translates to: VVHSESCCFRNLVFASGQASSGS*SAAAAP Trigger: CGGTGCTGCTGCCGCAGACCAGCTTCCCGATGAAGC...CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | TTCCGTGTTCCTGCTTCGGTTTCCATCAGGGAAAACCCAGGCAGTGGGGCAGCTAAGCCACATTTCTGCTaGATCTCCAGCTCCATGTCG | + |
Preference number: 4 (lower is better) Translates to: FRVPASVSIRENPGSGAAKPHFC*ISSSMS Trigger: CGACATGGAGCTGGAGATCCAGCAGAAATGTGGCTT...AGCTGCCCCACTGCCTGGGTTTTCCCTGATGGAAACCGAAGCAGGAACACGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | GGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGCGTTAGTAAGGAAGACTaGAACCAGCCCCCGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GFFVCHGCPGTLFVDQAGVSKED*NQPPSW Trigger: CCAGCTCGGGGGCTGGTTCCAGTCTTCCTTACTAAC...GCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCGGCTGCCTGAGCAAATaGTCTGGCTTTCTCCCTGAT | + |
Preference number: 4 (lower is better) Translates to: MYKWRGREKCSQQYTAPGGCLSK*SGFLPD Trigger: ATCAGGGAGAAAGCCAGATCATTTGCTCAGGCAGCC...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | GAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATCCCTGAAAGGTGCTTTTaGCCTGGTGGCCACACTTGT | + |
Preference number: 4 (lower is better) Translates to: EMHCALQISKPWLQFKCIPERCF*PGGHTC Trigger: ACAAGTGTGGCCACCAGGTCAAAAGCACCTTTCAGG...GATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GCGTGCACTACTGTCTGGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACTGCCGCCTTTCGAGCTaGTCTGGGGGCTGTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: ACTTVWLTCTFLSVTVLNCRLSS*SGGCPP Trigger: GGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCA...GTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | TCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACGCAGTTATTCCAGTCTaGCATCACTCCCCAGCGGAC | + |
Preference number: 4 (lower is better) Translates to: SQRSAYFYLPSAEIKGVHAVIPV*HHSPAD Trigger: GTCCGCTGGGGAGTGATGGCAGACTGGAATAACTGC...GTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | ACTCAGAGGCCTTATCTGTCACGCATTCCGTGTTCCTGCTTCGGTTTCCATCAGCTGAAGTTCAGGGCCTaGGGCATCGGTGAACATTCC | + |
Preference number: 4 (lower is better) Translates to: TQRPYLSRIPCSCFGFHQLKFRA*GIGEHS Trigger: GGAATGTTCACCGATGCCGCAGGCCCTGAACTTCAG...CTGATGGAAACCGAAGCAGGAACACGGAATGCGTGACAGATAAGGCCTCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | CTTGTAGAGGCACACAACTGCCACTCCCTGCAGAATCCCACGCTTCGTCATCCATTTTGCCAGGGATGCTaGCAAGAAAGGAGTCCCTCA | + |
Preference number: 4 (lower is better) Translates to: LVEAHNCHSLQNPTLRHPFCQGC*QERSPS Trigger: TGAGGGACTCCTTTCTTGGCAGCATCCCTGGCAAAA...TGGATGACGAAGCGTGGGATTCTGCAGGGAGTGGCAGTTGTGTGCCTCTACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAGAGCTCAATGTCACCTaGAGTTCTTTCCCGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: SNTRWCPATRAWHVLETLELNVT*SSFPWL Trigger: GAGCCACGGGAAAGAACTGCAGGTGACATTGAGCTC...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | TCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACCAAACCACTGCTTGCTaGCTCGAATCAGCACGGGTG | + |
Preference number: 4 (lower is better) Translates to: SQRSAYFYLPSAEIKGVHQTTAC*LESARV Trigger: CACCCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTG...GTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | TCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACGGCTGCCTGAGCAAATaGTCTGGCTTTCTCCCTGAT | + |
Preference number: 4 (lower is better) Translates to: SQRSAYFYLPSAEIKGVHGCLSK*SGFLPD Trigger: ATCAGGGAGAAAGCCAGATCATTTGCTCAGGCAGCC...GTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
CDS-3UTR TCA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATGAACCATCACTGTCCTaGAAGGTGCTTTTGACCTGG | + |
Preference number: 4 (lower is better) Translates to: GNALRSADQQALAAVQVYEPSLS*KVLLTW Trigger: CCAGGTCAAAAGCACCTTTCAGGACAGTGATGGTTC...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCTTACAAACCACTGCTTaGTGGCTCGAATCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: MYKWRGREKCSQQYTAPGLQTTA*WLESAR Trigger: CCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAA...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCAAGCCACATTTCTGCTaGATCTCCAGCTCCATGTCG | + |
Preference number: 4 (lower is better) Translates to: MYKWRGREKCSQQYTAPGKPHFC*ISSSMS Trigger: CGACATGGAGCTGGAGATCCAGCAGAAATGTGGCTT...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTTCAATGGGCAAGCCATaGCAATCCCAGCCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: STSLVLRLKACTTVWLTCSMGKP*QSQPGT Trigger: TGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGA...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | AGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGTTCCATACCGTGAGCTaGGGCTGTGTGAACCAACCC | + |
Preference number: 4 (lower is better) Translates to: RQGFFVCHGCPGTLFVDQFHTVS*GCVNQP Trigger: GGGTTGGTTCACACAGCCCCAGCTCACGGTATGGAA...CTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTGCGCTCTGCAGATCAGCTGCCTCCTCCAGTCCTaGCTTCTTCCAAATAGAGCT | + |
Preference number: 4 (lower is better) Translates to: SSPSADKCEEMHCALQISCLLQS*LLPNRA Trigger: AGCTCTATTTGGAAGAAGCCAGGACTGGAGGAGGCA...GCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGAACCATCACTGTCCTaGAAGGTGCTTTTGACCTGG | + |
Preference number: 4 (lower is better) Translates to: AYFYLPSAEIKGVHYCLAEPSLS*KVLLTW Trigger: CCAGGTCAAAAGCACCTTTCAGGACAGTGATGGTTC...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTATCGGGAAGCTGGTCTaGGGCAGCAGCACCGTGTCA | + |
Preference number: 4 (lower is better) Translates to: ICPSTFCVSLGFLSRELSIGKLV*GSSTVS Trigger: TGACACGGTGCTGCTGCCGCAGACCAGCTTCCCGAT...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTTTACAAACCACTGCTTaGTGGCTCGAATCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: AYFYLPSAEIKGVHYCLALQTTA*WLESAR Trigger: CCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAA...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTGCCTGTCCGGGAACAGGAGCAGTCTCAGAGGTATaGTTCCAACATCGAGGGCAC | + |
Preference number: 4 (lower is better) Translates to: VQNCLFLGLGHVACPGTGAVSEV*FQHRGH Trigger: GTGCCCTCGATGTTGGAAGCATACCTCTGAGACTGC...TCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GTAGTACACTCAGAGTCCTGCTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAGCATGAGGGTCACCGTTaGCATAAGGAGGCCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: VVHSESCCFRNLVFASGQHEGHR*HKEARH Trigger: ATGACGGGCCTCCTTATGCCAACGGTGACCCTCATG...CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | TCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCCATGAGGGTCACCGTTaGCATAAGGAGGCCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: SNSQRSAYFYLPSAEIKGHEGHR*HKEARH Trigger: ATGACGGGCCTCCTTATGCCAACGGTGACCCTCATG...GCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | TCTGACGGCAGCCAATCACCCGGGCTCTGCTATCAGCAGCATGTGCTATTTAGCATACTCTCAGCTGCTTaGCTTCGTACTTTGGGTCAA | + |
Preference number: 4 (lower is better) Translates to: SDGSQSPGLCYQQHVLFSILSAA*LRTLGQ Trigger: TTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTAT...GCTAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | GGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGGGAGGTTCTTTGCTGTaGTCTTTTCCTCCACTGATG | + |
Preference number: 4 (lower is better) Translates to: GFLCVPWLSWYSLCRPGWGGSLL*SFPPLM Trigger: CATCAGTGGAGGAAAAGACCACAGCAAAGAACCTCC...CCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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3UTR CAA 72 bp | GTGTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTaGCCTGTCCGGGAACAGGATGGGGCACTTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: VFKTVCFWDLVM*PVREQDGALCA Trigger: AGCACAAAGTGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | TCTAAATGTGACAAAGAACACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACGGCTGCCTGAGCAAATaGTCTGGCTTTCTCCCTGAT | + |
Preference number: 4 (lower is better) Translates to: SKCDKEHGGASEGRACSHGCLSK*SGFLPD Trigger: ATCAGGGAGAAAGCCAGATCATTTGCTCAGGCAGCC...GTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTGTTCTTTGTCACATTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR TCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTAGTACAGCCTTGTTCTaGAGTTCAGGGCCTGCGGCA | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTSTALF*SSGPAA Trigger: TGCCGCAGGCCCTGAACTTCAGAACAAGGCTGTACT...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | TCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCCTGAAAGGTGCTTTTaGCCTGGTGGCCACACTTGT | + |
Preference number: 4 (lower is better) Translates to: SRQGFFVCHGCPGTLFVDPERCF*PGGHTC Trigger: ACAAGTGTGGCCACCAGGTCAAAAGCACCTTTCAGG...GTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | GTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTGCCTGTCCGGGAACAGGACAATGGTCACCTCCGTaGAGACATTGGACTCAGCTA | + |
Preference number: 4 (lower is better) Translates to: VQNCLFLGLGHVACPGTGQWSPP*RHWTQL Trigger: TAGCTGAGTCCAATGTCTTCACGGAGGTGACCATTG...TCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGTGCCGCCTTTCGAGCTaGTCTGGGGGCTGTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRCRLSS*SGGCPP Trigger: GGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCA...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTAAGGGTGACTACAAGTaGCACCTTCCAGATCCACAC | + |
Preference number: 4 (lower is better) Translates to: STSLVLRLKACTTVWLTCKGDYK*HLPDPH Trigger: GTGTGGATCTGGAAGGTGGCACTTGTAGTCACCCTT...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTCTGAAGTTCAGGGCCTaGGGCATCGGTGAACATTCC | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTLKFRA*GIGEHS Trigger: GGAATGTTCACCGATGCCGCAGGCCCTGAACTTCAG...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTTCAATGGGCAAGCCATaGCAATCCCAGCCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTSMGKP*QSQPGT Trigger: TGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGA...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTGTTAGTAAGGAAGACTaGAACCAGCCCCCGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTVSKED*NQPPSW Trigger: CCAGCTCGGGGGCTGGTTCCAGTCTTCCTTACTAAC...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAAGCTGGACAGTTCTCTaGTGTAGAAGGCTTTCAACA | + |
Preference number: 4 (lower is better) Translates to: SNTRWCPATRAWHVLETLSWTVL*CRRLST Trigger: TGTTGAAAGCCTTCTACACCAGAGAACTGTCCAGCT...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CAA 72 bp | TTCTTCCAAGTGTTCAAAACTGTCTGTTTCTGGGACTaGGTCATGTTGCCTGTCCGGGAACAGGATGGGGCA | + |
Preference number: 4 (lower is better) Translates to: FFQVFKTVCFWD*VMLPVREQDGA Trigger: TGCCCCATCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAACACTTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | ACTCAGAGGCCTTATCTGTCACGCATTCCGTGTTCCTGCTTCGGTTTCCATCAGTTCCAGATCCACACCTaGAAATGCTGCAACAACATC | + |
Preference number: 4 (lower is better) Translates to: TQRPYLSRIPCSCFGFHQFQIHT*KCCNNI Trigger: GATGTTGTTGCAGCATTTTCAGGTGTGGATCTGGAA...CTGATGGAAACCGAAGCAGGAACACGGAATGCGTGACAGATAAGGCCTCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR TCA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTTTCCAGATCCACACCTaGAAATGCTGCAACAACATC | + |
Preference number: 4 (lower is better) Translates to: AYFYLPSAEIKGVHYCLAFQIHT*KCCNNI Trigger: GATGTTGTTGCAGCATTTTCAGGTGTGGATCTGGAA...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | TCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCCAATGGTCACCTCCGTaGAGACATTGGACTCAGCTA | + |
Preference number: 4 (lower is better) Translates to: SNSQRSAYFYLPSAEIKGQWSPP*RHWTQL Trigger: TAGCTGAGTCCAATGTCTTCACGGAGGTGACCATTG...GCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GGTCCTCTGTTCTCTCTTTATAAGCAAAAGGCACAGGACAGGATCTCTGCTGGATTACAAACCACTGCTTaGTGGCTCGAATCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: GPLFSLYKQKAQDRISAGLQTTA*WLESAR Trigger: CCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAA...TCCAGCAGAGATCCTGTCCTGTGCCTTTTGCTTATAAAGAGAGAACAGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAACATCACTGCCGTGCTaGTCGACGAGTTTAATAATA | + |
Preference number: 4 (lower is better) Translates to: SNTRWCPATRAWHVLETLTSLPC*STSLII Trigger: TATTATTAAACTCGTCGAGCAGCACGGCAGTGATGT...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTCAAACCACTGCTTGCTaGCTCGAATCAGCACGGGTG | + |
Preference number: 4 (lower is better) Translates to: ICPSTFCVSLGFLSRELSQTTAC*LESARV Trigger: CACCCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTG...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGCCATTCCCGAGGGACTTaGACATCTTTTCTCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: GFFVCHGCPGTLFVDQAGHSRGT*TSFLLF Trigger: AAAAAGGAGAAAAGATGTCCAAGTCCCTCGGGAATG...GCCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTTGCAGTTCTTTCCCGTaGCTCCTGAGCCAGCAATGT | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTCSSFP*LLSQQC Trigger: ACATTGCTGGCTCAGGAGCCACGGGAAAGAACTGCA...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTCCAGGAATAAAGCTCTaGAAAGCCACATTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: STSLVLRLKACTTVWLTCPGIKL*KATFLL Trigger: CAGCAGAAATGTGGCTTTTCAGAGCTTTATTCCTGG...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | GCGTGCACTACTGTCTGGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACAGTACAGCCTTGTTCTaGAGTTCAGGGCCTGCGGCA | + |
Preference number: 4 (lower is better) Translates to: ACTTVWLTCTFLSVTVLNSTALF*SSGPAA Trigger: TGCCGCAGGCCCTGAACTTCAGAACAAGGCTGTACT...GTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCGCATATACTGGTCTATaGCATACATATTCTTCACGG | + |
Preference number: 4 (lower is better) Translates to: MYKWRGREKCSQQYTAPGAYTGL*HTYSSR Trigger: CCGTGAAGAATATGTATGTCATAGACCAGTATATGC...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATGTCATACTGTTTGTATaGGTCAGTAATCTTTGTCGC | + |
Preference number: 4 (lower is better) Translates to: GNALRSADQQALAAVQVYVILFV*VSNLCR Trigger: GCGACAAAGATTACTGACTCATACAAACAGTATGAC...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GTAGTACACTCAGAGTCCTGCTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAGATGTCCAAAATGTCCTaGCCTGGCGCGTATTCCAAA | + |
Preference number: 4 (lower is better) Translates to: VVHSESCCFRNLVFASGQMSKMS*PGAYSK Trigger: TTTGGAATACGCGCCAGGGCAGGACATTTTGGACAT...CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GTTTTTCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGCGTAGGGAGGTTCTTTaGTGTGGTCTTTTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: VFQDRVSLCAMAVLVLSLRREVL*CGLFLH Trigger: GTGGAGGAAAAGACCACAGCAAAGAACCTCCCTACG...CAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTCAAAATTTCTGCCAATaGTGTCTGACACGAGCGGCG | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTQNFCQ*CLTRAA Trigger: CGCCGCTCGTGTCAGACAGCATTGGCAGAAATTTTG...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | AGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGATACTCTCAGCTGCTTaGCTTCGTACTTTGGGTCAA | + |
Preference number: 4 (lower is better) Translates to: RQGFFVCHGCPGTLFVDQILSAA*LRTLGQ Trigger: TTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTAT...CTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | AACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCCAAGTGTAAATCCATaGACCATCACTGTCCTGAAA | + |
Preference number: 4 (lower is better) Translates to: NSQRSAYFYLPSAEIKGVPSVNP*TITVLK Trigger: TTTCAGGACAGTGATGGTTCATGGATTTACACTTGG...CACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | AACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACCACAGCATACTTTaGCTCTGGCATATAGCAAAT | + |
Preference number: 4 (lower is better) Translates to: NSQRSAYFYLPSAEIKGVHHSIL*LWHIAN Trigger: ATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTG...CACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | CTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTACATTTCTTCAACGACTCCTTAGCTaGAGCCTTGATGTCCGTGAT | + |
Preference number: 4 (lower is better) Translates to: LVLRLKACTTVWLTCTFLQRLLS*SLDVRD Trigger: ATCACGGACATCAAGGCTGCAGCTAAGGAGTCGTTG...AAGAAATGTACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATACGAGTTTAATAATATaGTCAGTGGTTTGGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: GNALRSADQQALAAVQVYTSLII*SVVWLL Trigger: CAACAGCCAAACCACTGAGCATATTATTAAACTCGT...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTCGTAGGGAGGTTCTTTaGTGTGGTCTTTTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: ICPSTFCVSLGFLSRELSRREVL*CGLFLH Trigger: GTGGAGGAAAAGACCACAGCAAAGAACCTCCCTACG...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GCAGGCAACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGTCATGAGGGTCACCGTTaGCATAAGGAGGCCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: AGNDLGCFLYLLNIKSTGHEGHR*HKEARH Trigger: ATGACGGGCCTCCTTATGCCAACGGTGACCCTCATG...ACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | CAAAGAACACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGGAACCTCTCATCATATaGAATCGATTGGCAATGTCT | + |
Preference number: 4 (lower is better) Translates to: QRTRWSFRRKSLFPPSPMEPLII*NRLAMS Trigger: AGACATTGCCAATCGATTCCATATGATGAGAGGTTC...CATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTGTTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | GCAGGCAACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGTCAAACCACTGCTTGCTaGCTCGAATCAGCACGGGTG | + |
Preference number: 4 (lower is better) Translates to: AGNDLGCFLYLLNIKSTGQTTAC*LESARV Trigger: CACCCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTG...ACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CCA 90 bp | CTTGTAGAGGCACACAACTGCCACTCCCTGCAGAATCCCACGCTTCGTCATCCAATATGCTCAGTGGTTTaGCTGTTGATCAAATATTCA | + |
Preference number: 4 (lower is better) Translates to: LVEAHNCHSLQNPTLRHPICSVV*LLIKYS Trigger: TGAATATTTGATCAACAGCCAAACCACTGAGCATAT...TGGATGACGAAGCGTGGGATTCTGCAGGGAGTGGCAGTTGTGTGCCTCTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTCCAGGAATAAAGCTCTaGAAAGCCACATTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTPGIKL*KATFLL Trigger: CAGCAGAAATGTGGCTTTTCAGAGCTTTATTCCTGG...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTACACTTTTGTTTCAATaGGCAAGCCATGGCAATCCC | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTTLLFQ*ASHGNP Trigger: GGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGT...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GTTTTTCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGACACTTTTGTTTCAATaGGCAAGCCATGGCAATCCC | + |
Preference number: 4 (lower is better) Translates to: VFQDRVSLCAMAVLVLSLTLLFQ*ASHGNP Trigger: GGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGT...CAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTATACTCTCAGCTGCTTaGCTTCGTACTTTGGGTCAA | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTILSAA*LRTLGQ Trigger: TTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTAT...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | AGCAGGCAACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGAAGGGTGACTACAAGTaGCACCTTCCAGATCCACAC | + |
Preference number: 4 (lower is better) Translates to: SRQRFRMLSLLTEHKVHRKGDYK*HLPDPH Trigger: GTGTGGATCTGGAAGGTGGCACTTGTAGTCACCCTT...CCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | GCAGGCAACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGTCAACGACTCCTTAGCTaGAGCCTTGATGTCCGTGAT | + |
Preference number: 4 (lower is better) Translates to: AGNDLGCFLYLLNIKSTGQRLLS*SLDVRD Trigger: ATCACGGACATCAAGGCTGCAGCTAAGGAGTCGTTG...ACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTTGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | GTTTTTCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGACATCACTGCCGTGCTaGTCGACGAGTTTAATAATA | + |
Preference number: 4 (lower is better) Translates to: VFQDRVSLCAMAVLVLSLTSLPC*STSLII Trigger: TATTATTAAACTCGTCGAGCAGCACGGCAGTGATGT...CAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR GCA 90 bp | GCGTGCACTACTGTCTGGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACATGTCCAAAATGTCCTaGCCTGGCGCGTATTCCAAA | + |
Preference number: 4 (lower is better) Translates to: ACTTVWLTCTFLSVTVLNMSKMS*PGAYSK Trigger: TTTGGAATACGCGCCAGGGCAGGACATTTTGGACAT...GTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | TCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACATATGCTCAGTGGTTTaGCTGTTGATCAAATATTCA | + |
Preference number: 4 (lower is better) Translates to: SQRSAYFYLPSAEIKGVHICSVV*LLIKYS Trigger: TGAATATTTGATCAACAGCCAAACCACTGAGCATAT...GTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTCATTCCCGAGGGACTTaGACATCTTTTCTCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTHSRGT*TSFLLF Trigger: AAAAAGGAGAAAAGATGTCCAAGTCCCTCGGGAATG...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR TCA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTCCAAGTGTAAATCCATaGACCATCACTGTCCTGAAA | + |
Preference number: 4 (lower is better) Translates to: ICPSTFCVSLGFLSRELSPSVNP*TITVLK Trigger: TTTCAGGACAGTGATGGTTCATGGATTTACACTTGG...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTCACCACAGCATACTTTaGCTCTGGCATATAGCAAAT | + |
Preference number: 4 (lower is better) Translates to: ICPSTFCVSLGFLSRELSHHSIL*LWHIAN Trigger: ATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTG...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | TCAAGACAGGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACACGAGTTTAATAATATaGTCAGTGGTTTGGCTGTTG | + |
Preference number: 4 (lower is better) Translates to: SRQGFFVCHGCPGTLFVDTSLII*SVVWLL Trigger: CAACAGCCAAACCACTGAGCATATTATTAAACTCGT...GTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCCTGTCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CCA 90 bp | GGATTTCTTTCTAGGGAACTGTCTAACAGCTCATCTCCTCAGCCAGTCAGTACTGAACCTCTCATCATATaGAATCGATTGGCAATGTCT | + |
Preference number: 4 (lower is better) Translates to: GFLSRELSNSSSPQPVSTEPLII*NRLAMS Trigger: AGACATTGCCAATCGATTCCATATGATGAGAGGTTC...AGTACTGACTGGCTGAGGAGATGAGCTGTTAGACAGTTCCCTAGAAAGAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CAA 72 bp | ATTTCACAGAGCAATAAGTCAGACCATACTAGAACTTaGTACTCAGAGGCCTTATCTGTCACGCATTCCGTG | + |
Preference number: 4 (lower is better) Translates to: ISQSNKSDHTRT*YSEALSVTHSV Trigger: CACGGAATGCGTGACAGATAAGGCCTCTGAGTACAAAGTTCTAGTATGGTCTGACTTATTGCTCTGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR GCA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGCATTTTTGCCAGGGATaGTGCCAAGAAAGGAGTCCC | + |
Preference number: 4 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRHFCQG*CQERSP Trigger: GGGACTCCTTTCTTGGCAGCATCCCTGGCAAAAATG...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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3UTR CAA 72 bp | GTAGGAACACAGAGATTTCTCCTCTTGAATAACAATTaGGTGATGCTCTTTGTAGTACACTCAGAGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: VGTQRFLLLNNN*VMLFVVHSESC Trigger: GCAGGACTCTGAGTGTACTACAAAGAGCATCACCAAATTGTTATTCAAGAGGAGAAATCTCTGTGTTCCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR GCA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGCTGAAACACCTCTTCTaGCAAGTGAGGAAGAATGGG | + |
Preference number: 4 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRLKHLF*QVRKNG Trigger: CCCATTCTTCCTCACTTGGCAGAAGAGGTGTTTCAG...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CCA 90 bp | GCGTGCACTACTGTCTGGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACGAACCTCTCATCATATaGAATCGATTGGCAATGTCT | + |
Preference number: 4 (lower is better) Translates to: ACTTVWLTCTFLSVTVLNEPLII*NRLAMS Trigger: AGACATTGCCAATCGATTCCATATGATGAGAGGTTC...GTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR TCA 90 bp | AACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGTTTCCAGCCAGGAATAAAGCTCTaGAAAGCCACATTTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: NDLGCFLYLLNIKSTGFQPGIKL*KATFLL Trigger: CAGCAGAAATGTGGCTTTTCAGAGCTTTATTCCTGG...CTGGAAACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR TCA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGTTCCAGATCCACACCTaGAAATGCTGCAACAACATC | + |
Preference number: 4 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRFQIHT*KCCNNI Trigger: GATGTTGTTGCAGCATTTTCAGGTGTGGATCTGGAA...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CCA 90 bp | ATCGTACCACGAGCCTCCTCGTCATCCCCAGACACCCTAGGCGGCTaGGCAAACGGGCTGGCCCCCAGAAGCTCCCAGCCGCGGCGACCG | + |
Preference number: 5 (lower is better) Translates to: IVPRASSSSPDTLGG*ANGLAPRSSQPRRP Trigger: CGGTCGCCGCGGCTGGGAGCTTCTGGGGGCCAGCCCGTTTGCCCAGCCGCCTAGGGTGTCTGGGGATGACGAGGAGGCTCGTGGTACGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS GCA 90 bp | TCATCGGGAAGCTGGTCTGCGGCAGCAGCACCGTGTCACGGTATCTaGCGCCTTTCGAGCTGCTCTGGGGGCTGTCCGCCCCGGCCACGG | + |
Preference number: 5 (lower is better) Translates to: SSGSWSAAAAPCHGI*RLSSCSGGCPPRPR Trigger: CCGTGGCCGGGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCAGATACCGTGACACGGTGCTGCTGCCGCAGACCAGCTTCCCGATGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 90 bp | GGCAGCAGCACCGTGTCACGGTATCTGCCGCCTTTCGAGCTGCTCTaGGGGCTGTCCGCCCCGGCCACGGATCGTACCACGAGCCTCCTC | + |
Preference number: 5 (lower is better) Translates to: GSSTVSRYLPPFELL*GLSAPATDRTTSLL Trigger: GAGGAGGCTCGTGGTACGATCCGTGGCCGGGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCAGATACCGTGACACGGTGCTGCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | CATCAGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTGGCATATAGCAAATaGCCTGGTTGGCGGGAATTG | + |
Preference number: 5 (lower is better) Translates to: HQGKPRQWGSSDGSQSPGLAYSK*PGWREL Trigger: CAATTCCCGCCAACCAGGCAATTTGCTATATGCCAG...CCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS CCA 90 bp | GTGGCCACACTTGTTAGTAAGGAAGACTGGAACCAGCCCCCGAGCTaGTCCTTTCCCTCCAGGTACAAGTCTGCCCTCTGCTGCGTGTCT | + |
Preference number: 5 (lower is better) Translates to: VATLVSKEDWNQPPS*SFPSRYKSALCCVS Trigger: AGACACGCAGCAGAGGGCAGACTTGTACCTGGAGGGAAAGGACCAGCTCGGGGGCTGGTTCCAGTCTTCCTTACTAACAAGTGTGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 90 bp | CAGCAGCATTTTTGCCAGGGATGCTGCCAAGAAAGGAGTCCCTCATaGCGCACGCACTTTCCACTGCCTCCTCCAGTCCTGGCTTCTTCC | + |
Preference number: 5 (lower is better) Translates to: QQHFCQGCCQERSPS*RTHFPLPPPVLASS Trigger: GGAAGAAGCCAGGACTGGAGGAGGCAGTGGAAAGTGCGTGCGCCATGAGGGACTCCTTTCTTGGCAGCATCCCTGGCAAAAATGCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CCA 90 bp | GACGAATGTCCCCGTGAGCTCAATGTCACCTGCAGTTCTTTCCCGTaGCTCCTGAGCCAGCAATGTCGTCTGGGAAGCCATCATCAGCTC | + |
Preference number: 5 (lower is better) Translates to: DECPRELNVTCSSFP*LLSQQCRLGSHHQL Trigger: GAGCTGATGATGGCTTCCCAGACGACATTGCTGGCTCAGGAGCCACGGGAAAGAACTGCAGGTGACATTGAGCTCACGGGGACATTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | AGGGAAAACCCAGGCAGTGGGGCAGCTCTGACGGCAGCCAATCACCCGGGCTCTTCACCACAGCATACTTaGCCTCTGGCATATAGCAAA | + |
Preference number: 5 (lower is better) Translates to: RENPGSGAALTAANHPGSSPQHT*PLAYSK Trigger: TTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGA...AGAGCCCGGGTGATTGGCTGCCGTCAGAGCTGCCCCACTGCCTGGGTTTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | CACACAGCAGCAGCAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCACAACAACATCAAATGTaGTTTCCAAGGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: HTAAAEHALPPHGVECWAQQHQM*FPRQKR Trigger: TCGCTTCTGCCTTGGAAACAACATTTGATGTTGTTG...TGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTGCTGCTGCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | CAGAGCACGCCCTTCCACCTCACGGGGTGGAGTGCTGGGCAACTAGCTTCTACTTTTACAAACCACTGCTaGCTGGCTCGAATCAGCACG | + |
Preference number: 5 (lower is better) Translates to: QSTPFHLTGWSAGQLASTFTNHC*LARIST Trigger: CGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAAA...AGTAGAAGCTAGTTGCCCAGCACTCCACCCCGTGAGGTGGAAGGGCGTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CCA 90 bp | GAGGCTGTGCTGAGATGCTACGCTGTAATCTTCCATACCGTGAGCTaGGGCTGTGTGAACCAACCCTGTTCCTTTGGCCATAGTCACGTG | + |
Preference number: 5 (lower is better) Translates to: EAVLRCYAVIFHTVS*GCVNQPCSFGHSHV Trigger: CACGTGACTATGGCCAAAGGAACAGGGTTGGTTCACACAGCCCCAGCTCACGGTATGGAAGATTACAGCGTAGCATCTCAGCACAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | TCTGACGGCAGCCAATCACCCGGGCTCTGCTATCAGCAGCATGTGCTATTTAGCACCAACCCTGTTCCTTaGGCCATAGTCACGTGGGTA | + |
Preference number: 5 (lower is better) Translates to: SDGSQSPGLCYQQHVLFSTNPVP*AIVTWV Trigger: TACCCACGTGACTATGGCCAAAGGAACAGGGTTGGT...GCTAAATAGCACATGCTGCTGATAGCAGAGCCCGGGTGATTGGCTGCCGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS CCA 90 bp | GGAGTCCCTCATGGCGCACGCACTTTCCACTGCCTCCTCCAGTCCTaGCTTCTTCCAAATAGAGCTTGTATTAATCCAGCCAGTGCGAAA | + |
Preference number: 5 (lower is better) Translates to: GVPHGARTFHCLLQS*LLPNRACINPASAK Trigger: TTTCGCACTGGCTGGATTAATACAAGCTCTATTTGGAAGAAGCCAGGACTGGAGGAGGCAGTGGAAAGTGCGTGCGCCATGAGGGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | CTTGTAGAGGCACACAACTGCCACTCCCTGCAGAATCCCACGCTTCGTCATCCACTGGCATATAGCAAATaGCCTGGTTGGCGGGAATTG | + |
Preference number: 5 (lower is better) Translates to: LVEAHNCHSLQNPTLRHPLAYSK*PGWREL Trigger: CAATTCCCGCCAACCAGGCAATTTGCTATATGCCAG...TGGATGACGAAGCGTGGGATTCTGCAGGGAGTGGCAGTTGTGTGCCTCTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAACCAACCCTGTTCCTTaGGCCATAGTCACGTGGGTA | + |
Preference number: 5 (lower is better) Translates to: SNTRWCPATRAWHVLETLTNPVP*AIVTWV Trigger: TACCCACGTGACTATGGCCAAAGGAACAGGGTTGGT...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | GTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCAGGCTGTATTTACAAACCACTGCTaGCTGGCTCGAATCAGCACG | + |
Preference number: 5 (lower is better) Translates to: VELQKEEPVPTKSNAQAVFTNHC*LARIST Trigger: CGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAAA...TACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | TCTAACACACGGTGGTGTCCTGCAACAAGGGCGTGGCATGTGCTGGAAACCTTAACCTCCGTGAAGACATaGGACTCAGCTATCCACCAG | + |
Preference number: 5 (lower is better) Translates to: SNTRWCPATRAWHVLETLTSVKT*DSAIHQ Trigger: CTGGTGGATAGCTGAGTCCAATGTCTTCACGGAGGT...TAAGGTTTCCAGCACATGCCACGCCCTTGTTGCAGGACACCACCGTGTGTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS GCA 90 bp | AGAAGCTGCTCAGCAGGGAGGGTCCACCACACATCACTGCCGTGCTaGTCGACGAGTTTAATAATATGCTCAGTGGTTTGGCTGTTGATC | + |
Preference number: 5 (lower is better) Translates to: RSCSAGRVHHTSLPC*STSLIICSVVWLLI Trigger: GATCAACAGCCAAACCACTGAGCATATTATTAAACTCGTCGAGCAGCACGGCAGTGATGTGTGGTGGACCCTCCCTGCTGAGCAGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 90 bp | GGTCTCCTCAGCTTGGAGCATCTCCATGATCTCAAACAGCAGCCCTaGCTCGATCACTATGATGACCTCGTACTCAGCAGCATTTTTGCC | + |
Preference number: 5 (lower is better) Translates to: GLLSLEHLHDLKQQP*LDHYDDLVLSSIFA Trigger: GGCAAAAATGCTGCTGAGTACGAGGTCATCATAGTGATCGAGCCAGGGCTGCTGTTTGAGATCATGGAGATGCTCCAAGCTGAGGAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | GTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCAGGCTGTACTGACATGCTCAGGGTaGTATTCAAGCTCTGCTTCA | + |
Preference number: 5 (lower is better) Translates to: VELQKEEPVPTKSNAQAVLTCSG*YSSSAS Trigger: TGAAGCAGAGCTTGAATACAACCCTGAGCATGTCAG...TACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | GAGCCTGTTCCCACCAAGTCCAATGCGCAGGCTGTAGAGGCAGCAGGCAACGATCAACAACATCAAATGTaGTTTCCAAGGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: EPVPTKSNAQAVEAAGNDQQHQM*FPRQKR Trigger: TCGCTTCTGCCTTGGAAACAACATTTGATGTTGTTG...ATCGTTGCCTGCTGCCTCTACAGCCTGCGCATTGGACTTGGTGGGAACAGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATTACTCAGCAGCATTTTaGCCAGGGATGCTGCCAAGA | + |
Preference number: 5 (lower is better) Translates to: GNALRSADQQALAAVQVYYSAAF*PGMLPR Trigger: TCTTGGCAGCATCCCTGGCAAAAATGCTGCTGAGTA...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS TCA 90 bp | TGGTCCTTTCCCTCCAGGTACAAGTCTGCCCTCTGCTGCGTGTCTTaGAGAACACAAGACCATGAAGTTCCACTGTCAAACCAGATGTCC | + |
Preference number: 5 (lower is better) Translates to: WSFPSRYKSALCCVS*RTQDHEVPLSNQMS Trigger: GGACATCTGGTTTGACAGTGGAACTTCATGGTCTTGTGTTCTTCAAGACACGCAGCAGAGGGCAGACTTGTACCTGGAGGGAAAGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS GCA 90 bp | GATGCTGCCAAGAAAGGAGTCCCTCATGGCGCACGCACTTTCCACTaGCTCCTCCAGTCCTGGCTTCTTCCAAATAGAGCTTGTATTAAT | + |
Preference number: 5 (lower is better) Translates to: DAAKKGVPHGARTFH*LLQSWLLPNRACIN Trigger: ATTAATACAAGCTCTATTTGGAAGAAGCCAGGACTGGAGGAGGCAGTGGAAAGTGCGTGCGCCATGAGGGACTCCTTTCTTGGCAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
CDS CCA 90 bp | GACTCTGGGCATCTACACCGAGCTCTGATAACACTTTTGTTTCAATaGGCAAGCCATGGCAATCCCAGCCAGGCACAAAGTGTACCTTGG | + |
Preference number: 5 (lower is better) Translates to: DSGHLHRALITLLFQ*ASHGNPSQAQSVPW Trigger: CCAAGGTACACTTTGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGATGCCCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GAACACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACCAAGTCCAATGCGCAGCTTGGCTTCGTACTTaGGGTCAAATGTGTAATAGC | + |
Preference number: 5 (lower is better) Translates to: EHGGASEGRACSHQVQCAAWLRT*GQMCNS Trigger: GCTATTACACATTTGACCCAAAGTACGAAGCCAAGC...TGCGCATTGGACTTGGTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | ATGTACAAATGGAGGGGCCGGGAGAAATGTAGTCAGCAGTACACAGCACCAGGCCTGACATGCTCAGGGTaGTATTCAAGCTCTGCTTCA | + |
Preference number: 5 (lower is better) Translates to: MYKWRGREKCSQQYTAPGLTCSG*YSSSAS Trigger: TGAAGCAGAGCTTGAATACAACCCTGAGCATGTCAG...GCCTGGTGCTGTGTACTGCTGACTACATTTCTCCCGGCCCCTCCATTTGTACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTACCAACCCTGTTCCTTaGGCCATAGTCACGTGGGTA | + |
Preference number: 5 (lower is better) Translates to: STSLVLRLKACTTVWLTCTNPVP*AIVTWV Trigger: TACCCACGTGACTATGGCCAAAGGAACAGGGTTGGT...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS TCA 90 bp | GTACAAGTCTGCCCTCTGCTGCGTGTCTTGAAGAACACAAGACCATaGAGTTCCACTGTCAAACCAGATGTCCAAAATGTCCTGCCCTGG | + |
Preference number: 5 (lower is better) Translates to: VQVCPLLRVLKNTRP*SSTVKPDVQNVLPW Trigger: CCAGGGCAGGACATTTTGGACATCTGGTTTGACAGTGGAACTTCATGGTCTTGTGTTCTTCAAGACACGCAGCAGAGGGCAGACTTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
||
CDS-3UTR CAA 90 bp | GGAAATGCACTGCGCTCTGCAGATCAGCAAGCCCTGGCTGCAGTTCAAGTGTATGCTTGGCTTCGTACTTaGGGTCAAATGTGTAATAGC | + |
Preference number: 5 (lower is better) Translates to: GNALRSADQQALAAVQVYAWLRT*GQMCNS Trigger: GCTATTACACATTTGACCCAAAGTACGAAGCCAAGC...ATACACTTGAACTGCAGCCAGGGCTTGCTGATCTGCAGAGCGCAGTGCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
CDS-3UTR CAA 90 bp | TCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGACATGTTTTACAAACCACTGCTaGCTGGCTCGAATCAGCACG | + |
Preference number: 5 (lower is better) Translates to: STSLVLRLKACTTVWLTCFTNHC*LARIST Trigger: CGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAAA...ACATGTCAGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
CDS-3UTR CAA 90 bp | AGCAGTCCAAGTGCTGACAAGTGTGAGGAAATGCACTGCGCTCTGCAGATCAGCACATTCCCGAGGGACTaGGACATCTTTTCTCCTTTT | + |
Preference number: 5 (lower is better) Translates to: SSPSADKCEEMHCALQISTFPRD*DIFSPF Trigger: AAAAGGAGAAAAGATGTCCAAGTCCCTCGGGAATGT...GCTGATCTGCAGAGCGCAGTGCATTTCCTCACACTTGTCAGCACTTGGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
||
CDS-3UTR CAA 90 bp | GGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGACATTCCCGAGGGACTaGGACATCTTTTCTCCTTTT | + |
Preference number: 5 (lower is better) Translates to: GFLCVPWLSWYSLCRPGWTFPRD*DIFSPF Trigger: AAAAGGAGAAAAGATGTCCAAGTCCCTCGGGAATGT...CCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
||
CDS-3UTR CAA 90 bp | TCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCACCTCCGTGAAGACATaGGACTCAGCTATCCACCAG | + |
Preference number: 5 (lower is better) Translates to: SNSQRSAYFYLPSAEIKGTSVKT*DSAIHQ Trigger: CTGGTGGATAGCTGAGTCCAATGTCTTCACGGAGGT...GCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS CCA 90 bp | TCTACACCGAGCTCTGATAACACTTTTGTTTCAATGGGCAAGCCATaGCAATCCCAGCCAGGCACAAAGTGTACCTTGGAACCTCTCATC | + |
Preference number: 5 (lower is better) Translates to: STPSSDNTFVSMGKP*QSQPGTKCTLEPLI Trigger: GATGAGAGGTTCCAAGGTACACTTTGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTGCTTGGCTTCGTACTTaGGGTCAAATGTGTAATAGC | + |
Preference number: 5 (lower is better) Translates to: AYFYLPSAEIKGVHYCLAAWLRT*GQMCNS Trigger: GCTATTACACATTTGACCCAAAGTACGAAGCCAAGC...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | AACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCTGACATGCTCAGGGTaGTATTCAAGCTCTGCTTCA | + |
Preference number: 5 (lower is better) Translates to: NSQRSAYFYLPSAEIKGVLTCSG*YSSSAS Trigger: TGAAGCAGAGCTTGAATACAACCCTGAGCATGTCAG...CACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACTACTGTCTGGCTTCACCACAGCATACTTaGCCTCTGGCATATAGCAAA | + |
Preference number: 5 (lower is better) Translates to: AYFYLPSAEIKGVHYCLASPQHT*PLAYSK Trigger: TTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGA...AGCCAGACAGTAGTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GGGTTTCTTTGTGTGCCATGGCTGTCCTGGTACTCTCTTTGTAGACCAGGCTGGCAACAACATCAAATGTaGTTTCCAAGGCAGAAGCGA | + |
Preference number: 5 (lower is better) Translates to: GFLCVPWLSWYSLCRPGWQQHQM*FPRQKR Trigger: TCGCTTCTGCCTTGGAAACAACATTTGATGTTGTTG...CCAGCCTGGTCTACAAAGAGAGTACCAGGACAGCCATGGCACACAAAGAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | TCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCACCTGGTGGCCACACTaGTTAGTAAGGAAGACTGGA | + |
Preference number: 5 (lower is better) Translates to: SNSQRSAYFYLPSAEIKGTWWPH*LVRKTG Trigger: TCCAGTCTTCCTTACTAACAAGTGTGGCCACCAGGT...GCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS GCA 90 bp | TGCTGCAACAACATCAAATGTTGTTTCCAAGGCAGAAGCGACAGGTaGTATTTTATCTTCAGCCAGGATGTAGAGGTGCCCAGAGGCAGA | + |
Preference number: 5 (lower is better) Translates to: CCNNIKCCFQGRSDR*YFIFSQDVEVPRGR Trigger: TCTGCCTCTGGGCACCTCTACATCCTGGCTGAAGATAAAATAGCACCTGTCGCTTCTGCCTTGGAAACAACATTTGATGTTGTTGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 90 bp | CTTTCAAAATCTTGTTCAGGGCATGCCCAACATGAGGGTCACCGTTaGCATAAGGAGGCCCGTCATGAAGGCAAAATTCCGTCTTTACTT | + |
Preference number: 5 (lower is better) Translates to: LSKSCSGHAQHEGHR*HKEARHEGKIPSLL Trigger: AAGTAAAGACGGAATTTTGCCTTCATGACGGGCCTCCTTATGCCAACGGTGACCCTCATGTTGGGCATGCCCTGAACAAGATTTTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 90 bp | GCAAATGATCTGGCTTTCTCCCTGATCTCCATGGCTGAAAGACTCTaGGCATCTACACCGAGCTCTGATAACACTTTTGTTTCAATGGGC | + |
Preference number: 5 (lower is better) Translates to: ANDLAFSLISMAERL*ASTPSSDNTFVSMG Trigger: GCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGATGCCCAGAGTCTTTCAGCCATGGAGATCAGGGAGAAAGCCAGATCATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | TCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCGTGCACATGTCTTTCAAAATCTaGTTCAGGGCATGCCCAACA | + |
Preference number: 5 (lower is better) Translates to: SQRSAYFYLPSAEIKGVHMSFKI*FRACPT Trigger: TGTTGGGCATGCCCTGAACAAGATTTTGAAAGACAT...GTGCACGCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTGCCTGTCCGGGAACAGGATCACCACAGCATACTTaGCCTCTGGCATATAGCAAA | + |
Preference number: 5 (lower is better) Translates to: VQNCLFLGLGHVACPGTGSPQHT*PLAYSK Trigger: TTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGA...TCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | GTAGTACACTCAGAGTCCTGCTGCTTTAGAAACTTGGTGTTTGCTAGTGGGCAGAGTGTGTTTCTGAGCTaGCTGATGTCATCTCTGGCA | + |
Preference number: 5 (lower is better) Translates to: VVHSESCCFRNLVFASGQSVFLS*LMSSLA Trigger: TGCCAGAGATGACATCAGCAAGCTCAGAAACACACT...CTGCCCACTAGCAAACACCAAGTTTCTAAAGCAGCAGGACTCTGAGTGTACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | TCTAAATGTGACAAAGAACACGGTGGAGCTTCAGAAGGAAGAGCCTGTTCCCACATGTCTTTCAAAATCTaGTTCAGGGCATGCCCAACA | + |
Preference number: 5 (lower is better) Translates to: SKCDKEHGGASEGRACSHMSFKI*FRACPT Trigger: TGTTGGGCATGCCCTGAACAAGATTTTGAAAGACAT...GTGGGAACAGGCTCTTCCTTCTGAAGCTCCACCGTGTTCTTTGTCACATTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | GCGTGCACTACTGTCTGGCTGACATGTACATTTCTTAGTGTTACTGTTTTGAACCTGGCATATAGCAAATaGCCTGGTTGGCGGGAATTG | + |
Preference number: 5 (lower is better) Translates to: ACTTVWLTCTFLSVTVLNLAYSK*PGWREL Trigger: CAATTCCCGCCAACCAGGCAATTTGCTATATGCCAG...GTTCAAAACAGTAACACTAAGAAATGTACATGTCAGCCAGACAGTAGTGCACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GTTCAAAACTGTCTGTTTCTGGGACTTGGTCATGTTGCCTGTCCGGGAACAGGAAATATGCTCAGTGGTTaGGCTGTTGATCAAATATTC | + |
Preference number: 5 (lower is better) Translates to: VQNCLFLGLGHVACPGTGNMLSG*AVDQIF Trigger: GAATATTTGATCAACAGCCAAACCACTGAGCATATT...TCCTGTTCCCGGACAGGCAACATGACCAAGTCCCAGAAACAGACAGTTTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | ATCTGCCCCTCTACTTTCTGTGTAAGCCTTGGATTTCTTTCTAGGGAACTGTCTGCTCTGATAACACTTTaGTTTCAATGGGCAAGCCAT | + |
Preference number: 5 (lower is better) Translates to: ICPSTFCVSLGFLSRELSALITL*FQWASH Trigger: ATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGC...AGACAGTTCCCTAGAAAGAAATCCAAGGCTTACACAGAAAGTAGAGGGGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | TCAAACTCCCAGAGATCTGCCTACTTCTACCTCCCTAGTGCTGAGATTAAAGGCAATATGCTCAGTGGTTaGGCTGTTGATCAAATATTC | + |
Preference number: 5 (lower is better) Translates to: SNSQRSAYFYLPSAEIKGNMLSG*AVDQIF Trigger: GAATATTTGATCAACAGCCAAACCACTGAGCATATT...GCCTTTAATCTCAGCACTAGGGAGGTAGAAGTAGGCAGATCTCTGGGAGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110975.8 |
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CDS-3UTR CAA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGACCTGGTGGCCACACTaGTTAGTAAGGAAGACTGGA | + |
Preference number: 5 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRTWWPH*LVRKTG Trigger: TCCAGTCTTCCTTACTAACAAGTGTGGCCACCAGGT...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CCA 90 bp | AAACCAAGCCCTTCTCATACATTTGGTAGAATACTCTCAGCTGCTTaGCTTCGTACTTTGGGTCAAATGTGTAATAGCAGTTATTCCAGT | + |
Preference number: 5 (lower is better) Translates to: KPSPSHTFGRILSAA*LRTLGQMCNSSYSS Trigger: ACTGGAATAACTGCTATTACACATTTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTATTCTACCAAATGTATGAGAAGGGCTTGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 90 bp | ACCTTAGCGCGTAAGTCAACAGTGCTGGTGACAACATACGTCTGTTaGTCAAATATTCATCTTTTGTCTTATGATGAAACACAGGAATGG | + |
Preference number: 5 (lower is better) Translates to: TLARKSTVLVTTYVC*SNIHLLSYDETQEW Trigger: CCATTCCTGTGTTTCATCATAAGACAAAAGATGAATATTTGATCAACAGACGTATGTTGTCACCAGCACTGTTGACTTACGCGCTAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS-3UTR CAA 90 bp | GCTTACACCGATTATAGCATTCACTTAGAAGTTGCTATAATCCACTTCATTAGGATGTCTTTCAAAATCTaGTTCAGGGCATGCCCAACA | + |
Preference number: 5 (lower is better) Translates to: AYTDYSIHLEVAIIHFIRMSFKI*FRACPT Trigger: TGTTGGGCATGCCCTGAACAAGATTTTGAAAGACAT...CCTAATGAAGTGGATTATAGCAACTTCTAAGTGAATGCTATAATCGGTGTAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS-3UTR CAA 90 bp | AACGATTTAGGATGCTTTCTTTACTTACTGAACATAAAGTCCACAGGTTTCCAGGCTCTGATAACACTTTaGTTTCAATGGGCAAGCCAT | + |
Preference number: 5 (lower is better) Translates to: NDLGCFLYLLNIKSTGFQALITL*FQWASH Trigger: ATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGC...CTGGAAACCTGTGGACTTTATGTTCAGTAAGTAAAGAAAGCATCCTAAATCGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |
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CDS CCA 72 bp | CGAGCCTCCTCGTCATCCCCAGACACCCTAGGCGGCTaGGCAAACGGGCTGGCCCCCAGAAGCTCCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: RASSSSPDTLGG*ANGLAPRSSQP Trigger: CGGCTGGGAGCTTCTGGGGGCCAGCCCGTTTGCCCAGCCGCCTAGGGTGTCTGGGGATGACGAGGAGGCTCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS GCA 72 bp | AGCTGGTCTGCGGCAGCAGCACCGTGTCACGGTATCTaGCGCCTTTCGAGCTGCTCTGGGGGCTGTCCGCCC | + |
Preference number: 6 (lower is better) Translates to: SWSAAAAPCHGI*RLSSCSGGCPP Trigger: GGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCAGATACCGTGACACGGTGCTGCTGCCGCAGACCAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | ACCGTGTCACGGTATCTGCCGCCTTTCGAGCTGCTCTaGGGGCTGTCCGCCCCGGCCACGGATCGTACCACG | + |
Preference number: 6 (lower is better) Translates to: TVSRYLPPFELL*GLSAPATDRTT Trigger: CGTGGTACGATCCGTGGCCGGGGCGGACAGCCCCCAGAGCAGCTCGAAAGGCGGCAGATACCGTGACACGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS GCA 72 bp | GCCCCCGAGCTGGTCCTTTCCCTCCAGGTACAAGTCTaGCCTCTGCTGCGTGTCTTGAAGAACACAAGACCA | + |
Preference number: 6 (lower is better) Translates to: APELVLSLQVQV*PLLRVLKNTRP Trigger: TGGTCTTGTGTTCTTCAAGACACGCAGCAGAGGGCAGACTTGTACCTGGAGGGAAAGGACCAGCTCGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 72 bp | TTTTGCCAGGGATGCTGCCAAGAAAGGAGTCCCTCATaGCGCACGCACTTTCCACTGCCTCCTCCAGTCCTG | + |
Preference number: 6 (lower is better) Translates to: FCQGCCQERSPS*RTHFPLPPPVL Trigger: CAGGACTGGAGGAGGCAGTGGAAAGTGCGTGCGCCATGAGGGACTCCTTTCTTGGCAGCATCCCTGGCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS TCA 72 bp | CAGCAGAGAGTACAGAGGGGCCAATGGTCACCTCCGTaGAGACATTGGACTCAGCTATCCACCAGCGCAGGA | + |
Preference number: 6 (lower is better) Translates to: QQRVQRGQWSPP*RHWTQLSTSAG Trigger: TCCTGCGCTGGTGGATAGCTGAGTCCAATGTCTTCACGGAGGTGACCATTGGCCCCTCTGTACTCTCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CTTGTTAGTAAGGAAGACTGGAACCAGCCCCCGAGCTaGTCCTTTCCCTCCAGGTACAAGTCTGCCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: LVSKEDWNQPPS*SFPSRYKSALC Trigger: GCAGAGGGCAGACTTGTACCTGGAGGGAAAGGACCAGCTCGGGGGCTGGTTCCAGTCTTCCTTACTAACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS GCA 72 bp | GAAGTTCCACTGTCAAACCAGATGTCCAAAATGTCCTaGCCTGGCGCGTATTCCAAAGCCCCAGGGCCACCA | + |
Preference number: 6 (lower is better) Translates to: EVPLSNQMSKMS*PGAYSKAPGPP Trigger: TGGTGGCCCTGGGGCTTTGGAATACGCGCCAGGGCAGGACATTTTGGACATCTGGTTTGACAGTGGAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CAA 72 bp | AGTACAGAGGGGCCAATGGTCACCTCCGTGAAGACATaGGACTCAGCTATCCACCAGCGCAGGATGTCAGCT | + |
Preference number: 6 (lower is better) Translates to: STEGPMVTSVKT*DSAIHQRRMSA Trigger: AGCTGACATCCTGCGCTGGTGGATAGCTGAGTCCAATGTCTTCACGGAGGTGACCATTGGCCCCTCTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 72 bp | TCTTGTTCAGGGCATGCCCAACATGAGGGTCACCGTTaGCATAAGGAGGCCCGTCATGAAGGCAAAATTCCG | + |
Preference number: 6 (lower is better) Translates to: SCSGHAQHEGHR*HKEARHEGKIP Trigger: CGGAATTTTGCCTTCATGACGGGCCTCCTTATGCCAACGGTGACCCTCATGTTGGGCATGCCCTGAACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 72 bp | CGGACCAACACATCCAAAATTTCTGCCAATGCTGTCTaGCACGAGCGGCGCTTGGGATCCTTCTCGTTTTCG | + |
Preference number: 6 (lower is better) Translates to: RTNTSKISANAV*HERRLGSFSFS Trigger: CGAAAACGAGAAGGATCCCAAGCGCCGCTCGTGTCAGACAGCATTGGCAGAAATTTTGGATGTGTTGGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS GCA 72 bp | GTGCCCAGAGGCAGAACATTTCACCACAGCATACTTTaGCTCTGGCATATAGCAAATTGCCTGGTTGGCGGG | + |
Preference number: 6 (lower is better) Translates to: VPRGRTFHHSIL*LWHIANCLVGG Trigger: CCCGCCAACCAGGCAATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGAAATGTTCTGCCTCTGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS GCA 72 bp | TCAGCAGGGAGGGTCCACCACACATCACTGCCGTGCTaGTCGACGAGTTTAATAATATGCTCAGTGGTTTGG | + |
Preference number: 6 (lower is better) Translates to: SAGRVHHTSLPC*STSLIICSVVW Trigger: CCAAACCACTGAGCATATTATTAAACTCGTCGAGCAGCACGGCAGTGATGTGTGGTGGACCCTCCCTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CTGAGATGCTACGCTGTAATCTTCCATACCGTGAGCTaGGGCTGTGTGAACCAACCCTGTTCCTTTGGCCAT | + |
Preference number: 6 (lower is better) Translates to: LRCYAVIFHTVS*GCVNQPCSFGH Trigger: ATGGCCAAAGGAACAGGGTTGGTTCACACAGCCCCAGCTCACGGTATGGAAGATTACAGCGTAGCATCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CATGGCGCACGCACTTTCCACTGCCTCCTCCAGTCCTaGCTTCTTCCAAATAGAGCTTGTATTAATCCAGCC | + |
Preference number: 6 (lower is better) Translates to: HGARTFHCLLQS*LLPNRACINPA Trigger: GGCTGGATTAATACAAGCTCTATTTGGAAGAAGCCAGGACTGGAGGAGGCAGTGGAAAGTGCGTGCGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CAA 72 bp | GGTGCCCAGAGGCAGAACATTTCACCACAGCATACTTaGCCTCTGGCATATAGCAAATTGCCTGGTTGGCGG | + |
Preference number: 6 (lower is better) Translates to: GAQRQNISPQHT*PLAYSKLPGWR Trigger: CCGCCAACCAGGCAATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGAAATGTTCTGCCTCTGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | GGATGTAGAGGTGCCCAGAGGCAGAACATTTCACCACAGCATACTTaGCCTCTGGCATATAGCAAATTGCCTGGTTGGCGGGAATTGTCC | + |
Preference number: 6 (lower is better) Translates to: GCRGAQRQNISPQHT*PLAYSKLPGWRELS Trigger: GGACAATTCCCGCCAACCAGGCAATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGAAATGTTCTGCCTCTGGGCACCTCTACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 72 bp | CAATGGCTGCCTGAGCAAATGATCTGGCTTTCTCCCTaGTCTCCATGGCTGAAAGACTCTGGGCATCTACAC | + |
Preference number: 6 (lower is better) Translates to: QWLPEQMIWLSP*SPWLKDSGHLH Trigger: GTGTAGATGCCCAGAGTCTTTCAGCCATGGAGATCAGGGAGAAAGCCAGATCATTTGCTCAGGCAGCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 72 bp | CCCTCCAGGTACAAGTCTGCCCTCTGCTGCGTGTCTTaGAGAACACAAGACCATGAAGTTCCACTGTCAAAC | + |
Preference number: 6 (lower is better) Translates to: PSRYKSALCCVS*RTQDHEVPLSN Trigger: GTTTGACAGTGGAACTTCATGGTCTTGTGTTCTTCAAGACACGCAGCAGAGGGCAGACTTGTACCTGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027921.11 ENSMUST00000110975.8 |
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CDS GCA 72 bp | AAAAGCACGGACCAACACATCCAAAATTTCTGCCAATaGTGTCTGACACGAGCGGCGCTTGGGATCCTTCTC | + |
Preference number: 6 (lower is better) Translates to: KSTDQHIQNFCQ*CLTRAALGILL Trigger: GAGAAGGATCCCAAGCGCCGCTCGTGTCAGACAGCATTGGCAGAAATTTTGGATGTGTTGGTCCGTGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CAA 72 bp | GACTCTGGGCATCTACACCGAGCTCTGATAACACTTTaGTTTCAATGGGCAAGCCATGGCAATCCCAGCCAG | + |
Preference number: 6 (lower is better) Translates to: DSGHLHRALITL*FQWASHGNPSQ Trigger: CTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGATGCCCAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | TGGCTGAAAGACTCTGGGCATCTACACCGAGCTCTGATAACACTTTaGTTTCAATGGGCAAGCCATGGCAATCCCAGCCAGGCACAAAGT | + |
Preference number: 6 (lower is better) Translates to: WLKDSGHLHRALITL*FQWASHGNPSQAQS Trigger: ACTTTGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGATGCCCAGAGTCTTTCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | TCCTTAGCTGCAGCCTTGATGTCCGTGATATTTACAAACCACTGCTaGCTGGCTCGAATCAGCACGGGTGTCTTAGTTCTCCAGTCACAG | + |
Preference number: 6 (lower is better) Translates to: SLAAALMSVIFTNHC*LARISTGVLVLQSQ Trigger: CTGTGACTGGAGAACTAAGACACCCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAAATATCACGGACATCAAGGCTGCAGCTAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | CCGGGAATGAACTTCACCGTCTTCAACGACTCCTTAGCTGCAGCCTaGATGTCCGTGATATTTACAAACCACTGCTTGCTGGCTCGAATC | + |
Preference number: 6 (lower is better) Translates to: PGMNFTVFNDSLAAA*MSVIFTNHCLLARI Trigger: GATTCGAGCCAGCAAGCAGTGGTTTGTAAATATCACGGACATCAAGGCTGCAGCTAAGGAGTCGTTGAAGACGGTGAAGTTCATTCCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | AAACCGGTCAAATTTCCCAAGAGAAAGCGGAGTGTGTTTCTGAGCTaGCTGATGTCATCTCTGGCAGCAGAGAGTACAGAGGGGCCAATG | + |
Preference number: 6 (lower is better) Translates to: KPVKFPKRKRSVFLS*LMSSLAAESTEGPM Trigger: CATTGGCCCCTCTGTACTCTCTGCTGCCAGAGATGACATCAGCAAGCTCAGAAACACACTCCGCTTTCTCTTGGGAAATTTGACCGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS TCA 72 bp | ACCACATCTGTTCCTTCTTTAAGTACAGCCTTGTTCTaGAGTTCAGGGCCTGCGGCATCGGTGAACATTCCG | + |
Preference number: 6 (lower is better) Translates to: TTSVPSLSTALF*SSGPAASVNIP Trigger: CGGAATGTTCACCGATGCCGCAGGCCCTGAACTTCAGAACAAGGCTGTACTTAAAGAAGGAACAGATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CATACTTTGCCTCTGGCATATAGCAAATTGCCTGGTTaGCGGGAATTGTCCAAGGCTGGGTGGTCCAAACTA | + |
Preference number: 6 (lower is better) Translates to: HTLPLAYSKLPG*RELSKAGWSKL Trigger: TAGTTTGGACCACCCAGCCTTGGACAATTCCCGCCAACCAGGCAATTTGCTATATGCCAGAGGCAAAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 72 bp | GCAGCCTTGATGTCCGTGATATTTACAAACCACTGCTaGCTGGCTCGAATCAGCACGGGTGTCTTAGTTCTC | + |
Preference number: 6 (lower is better) Translates to: AALMSVIFTNHC*LARISTGVLVL Trigger: GAGAACTAAGACACCCGTGCTGATTCGAGCCAGCAAGCAGTGGTTTGTAAATATCACGGACATCAAGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | AGCCATGGCAATCCCAGCCAGGCACAAAGTGTACCTTaGAACCTCTCATCATATGGAATCGATTGGCAATGT | + |
Preference number: 6 (lower is better) Translates to: SHGNPSQAQSVP*NLSSYGIDWQC Trigger: ACATTGCCAATCGATTCCATATGATGAGAGGTTCCAAGGTACACTTTGTGCCTGGCTGGGATTGCCATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CATCTACACCGAGCTCTGATAACACTTTTGTTTCAATaGGCAAGCCATGGCAATCCCAGCCAGGCACAAAGT | + |
Preference number: 6 (lower is better) Translates to: HLHRALITLLFQ*ASHGNPSQAQS Trigger: ACTTTGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCTCGGTGTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CTGGCTTTCTCCCTGATCTCCATGGCTGAAAGACTCTaGGCATCTACACCGAGCTCTGATAACACTTTTGTT | + |
Preference number: 6 (lower is better) Translates to: LAFSLISMAERL*ASTPSSDNTFV Trigger: AACAAAAGTGTTATCAGAGCTCGGTGTAGATGCCCAGAGTCTTTCAGCCATGGAGATCAGGGAGAAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 72 bp | AAGCCATGGCAATCCCAGCCAGGCACAAAGTGTACCTaGGAACCTCTCATCATATGGAATCGATTGGCAATG | + |
Preference number: 6 (lower is better) Translates to: KPWQSQPGTKCT*EPLIIWNRLAM Trigger: CATTGCCAATCGATTCCATATGATGAGAGGTTCCAAGGTACACTTTGTGCCTGGCTGGGATTGCCATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS GCA 72 bp | GAGACACTTTATCGGGAGTTAAAGGGTGACTACAAGTaGCACCTTCCAGATCCACACCTGAAAATGCTGCAA | + |
Preference number: 6 (lower is better) Translates to: ETLYRELKGDYK*HLPDPHLKMLQ Trigger: TTGCAGCATTTTCAGGTGTGGATCTGGAAGGTGGCACTTGTAGTCACCCTTTAACTCCCGATAAAGTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | AGCTCTGATAACACTTTTGTTTCAATGGGCAAGCCATaGCAATCCCAGCCAGGCACAAAGTGTACCTTGGAA | + |
Preference number: 6 (lower is better) Translates to: SSDNTFVSMGKP*QSQPGTKCTLE Trigger: TTCCAAGGTACACTTTGTGCCTGGCTGGGATTGCCATGGCTTGCCCATTGAAACAAAAGTGTTATCAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | AGAGGCAGAACATTTCACCACAGCATACTTTGCCTCTaGCATATAGCAAATTGCCTGGTTGGCGGGAATTGT | + |
Preference number: 6 (lower is better) Translates to: RGRTFHHSILCL*HIANCLVGGNC Trigger: ACAATTCCCGCCAACCAGGCAATTTGCTATATGCCAGAGGCAAAGTATGCTGTGGTGAAATGTTCTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 72 bp | AATCTTACGTATATCGACCGACTGACATGCTCAGGGTaGTATTCAAGCTCTGCTTCAGCCAACGCAGTCCTT | + |
Preference number: 6 (lower is better) Translates to: NLTYIDRLTCSG*YSSSASANAVL Trigger: AAGGACTGCGTTGGCTGAAGCAGAGCTTGAATACAACCCTGAGCATGTCAGTCGGTCGATATACGTAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 72 bp | AACTTCACCGTCTTCAACGACTCCTTAGCTGCAGCCTaGATGTCCGTGATATTTACAAACCACTGCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: NFTVFNDSLAAA*MSVIFTNHCLL Trigger: CAGCAAGCAGTGGTTTGTAAATATCACGGACATCAAGGCTGCAGCTAAGGAGTCGTTGAAGACGGTGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 72 bp | AAATTTCCCAAGAGAAAGCGGAGTGTGTTTCTGAGCTaGCTGATGTCATCTCTGGCAGCAGAGAGTACAGAG | + |
Preference number: 6 (lower is better) Translates to: KFPKRKRSVFLS*LMSSLAAESTE Trigger: CTCTGTACTCTCTGCTGCCAGAGATGACATCAGCAAGCTCAGAAACACACTCCGCTTTCTCTTGGGAAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS TCA 72 bp | AGGGTGACTACAAGTGCCACCTTCCAGATCCACACCTaGAAATGCTGCAACAACATCAAATGTTGTTTCCAA | + |
Preference number: 6 (lower is better) Translates to: RVTTSATFQIHT*KCCNNIKCCFQ Trigger: TTGGAAACAACATTTGATGTTGTTGCAGCATTTTCAGGTGTGGATCTGGAAGGTGGCACTTGTAGTCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 72 bp | TGGACAGTTCTCTGGTGTAGAAGGCTTTCAACAGCCTaGCAACTTTCCCAAAGTCATACTGTTTGTATGAGT | + |
Preference number: 6 (lower is better) Translates to: WTVLWCRRLSTA*QLSQSHTVCMS Trigger: ACTCATACAAACAGTATGACTTTGGGAAAGTTGTCAGGCTGTTGAAAGCCTTCTACACCAGAGAACTGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS CCA 72 bp | TTGGTAGAATACTCTCAGCTGCTTGGCTTCGTACTTTaGGTCAAATGTGTAATAGCAGTTATTCCAGTCTGC | + |
Preference number: 6 (lower is better) Translates to: LVEYSQLLGFVL*VKCVIAVIPVC Trigger: GCAGACTGGAATAACTGCTATTACACATTTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTATTCTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | TCTCATACATTTGGTAGAATACTCTCAGCTGCTTGGCTTCGTACTTaGGGTCAAATGTGTAATAGCAGTTATTCCAGTCTGCCATCACTC | + |
Preference number: 6 (lower is better) Translates to: SHTFGRILSAAWLRT*GQMCNSSYSSLPSL Trigger: GAGTGATGGCAGACTGGAATAACTGCTATTACACATTTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTATTCTACCAAATGTATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CCA 72 bp | CCTTCTCATACATTTGGTAGAATACTCTCAGCTGCTTaGCTTCGTACTTTGGGTCAAATGTGTAATAGCAGT | + |
Preference number: 6 (lower is better) Translates to: PSHTFGRILSAA*LRTLGQMCNSS Trigger: ACTGCTATTACACATTTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTATTCTACCAAATGTATGAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS CAA 90 bp | ATATACTGGTTTGTAAGATCGATAAACCAAGCCCTTCTCATACATTaGGTAGAATACTCTCAGCTGCTTGGCTTCGTACTTTGGGTCAAA | + |
Preference number: 6 (lower is better) Translates to: IYWFVRSINQALLIH*VEYSQLLGFVLWVK Trigger: TTTGACCCAAAGTACGAAGCCAAGCAGCTGAGAGTATTCTACCAAATGTATGAGAAGGGCTTGGTTTATCGATCTTACAAACCAGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027921.11 ENSMUST00000110974.4 ENSMUST00000110975.8 |
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CDS TCA 72 bp | TGTTTGTATGAGTCAGTAATCTTTGTCGCAAAATCCTaGATTAAGTGCAGCATATACTGGTCTATGACATAC | + |
Preference number: 6 (lower is better) Translates to: CLYESVIFVAKS*IKCSIYWSMTY Trigger: GTATGTCATAGACCAGTATATGCTGCACTTAATTCAGGATTTTGCGACAAAGATTACTGACTCATACAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027921.11 |
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CDS TCA 72 bp | CGTAAGTCAACAGTGCTGGTGACAACATACGTCTGTTaGTCAAATATTCATCTTTTGTCTTATGATGAAACA | + |
Preference number: 6 (lower is better) Translates to: RKSTVLVTTYVC*SNIHLLSYDET Trigger: TGTTTCATCATAAGACAAAAGATGAATATTTGATCAACAGACGTATGTTGTCACCAGCACTGTTGACTTACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110974.4 |