Pregenerated sensors for IARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037851Ensembl transcript IDs: ENSMUST00000047363.14, ENSMUST00000164260.8, ENSMUST00000165316.8, ENSMUST00000171510.2, ENSMUST00000172254.3
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTAAAACCATCCTCTGGTTTGATCGATGCCTTCAGCAATGAAGTCTaGAGGAAAGGCATCCTCAAACTCGCGCTTGCTCTCGAACGGATA | + |
Preference number: 1 (lower is better) Translates to: VKPSSGLIDAFSNEV*RKGILKLALALERI Trigger: TATCCGTTCGAGAGCAAGCGCGAGTTTGAGGATGCCTTTCCTGCAGACTTCATTGCTGAAGGCATCGATCAAACCAGAGGATGGTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR TCA 90 bp | CTCGAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTGCTTTCCCGCACCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGG | + |
Preference number: 4 (lower is better) Translates to: LEPAVKHLRDAPQWCFPAPPSLR*PTVGWG Trigger: CCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGG...TGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR TCA 90 bp | TCGAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTGCTTTCCCGCAGTTCAAGCTCTGCCACTaGTCCAATGCACACTCCTCC | + |
Preference number: 4 (lower is better) Translates to: SNQQSNTSETRRNGAFPQFKLCH*SNAHSS Trigger: GGAGGAGTGTGCATTGGATCAGTGGCAGAGCTTGAA...CTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR CCA 90 bp | GATGCCTTCAGCAATGAAGTCTGCAGGAAAGGCATCCTCAAACTCGCGCTTGCTTTCGCTGACCCACAGTaGGATGGGGGTGCCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: DAFSNEVCRKGILKLALAFADPQ*DGGAPV Trigger: TACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAA...AGCAAGCGCGAGTTTGAGGATGCCTTTCCTGCAGACTTCATTGCTGAAGGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVPPSLR*PTVGWG Trigger: CCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | GCCTTCAGCAATGAAGTCTGCAGGAAAGGCATCCTCAAACTCGCGCTTGCTCTCACAGTGGGATGGGGGTaGCCCAGTATCTGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: AFSNEVCRKGILKLALALTVGWG*PSICFW Trigger: CCAGAAACAGATACTGGGGCACCCCCATCCCACTGT...GAGAGCAAGCGCGAGTTTGAGGATGCCTTTCCTGCAGACTTCATTGCTGAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGAGTGTGCTTCAAACTaGGCGGTCCCTCCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVECASN*AVPPVA Trigger: GGCCACGGGAGGGACCGCGCAGTTTGAAGCACACTC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCGCGGTCCCTCCCGTaGCCTGGTCAAAGGTGTACA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVARSLP*PGQRCT Trigger: TGTACACCTTTGACCAGGCCACGGGAGGGACCGCGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | GGCATCCTCAAACTCGCGCTTGCTCTCGAACGGATAATGGACCTGGGCATAGGGCTCTCTGTGGAGATCTaGGATTTTTGTTCCCGACAG | + |
Preference number: 4 (lower is better) Translates to: GILKLALALERIMDLGIGLSVEI*DFCSRQ Trigger: CTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAG...CCCTATGCCCAGGTCCATTATCCGTTCGAGAGCAAGCGCGAGTTTGAGGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTGCAGGTTGAGGTACTaGCACAGCAGGGTGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVCRLRY*HSRVLG Trigger: CCCCAGCACCCTGCTGTGTCAGTACCTCAACCTGCA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TTCCACTCTCGAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTGCTTTCTGTTTCTGGAAATTaGCCAGTCACGGGCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: FHSRTSSQTPQRRAAMVLSVSGN*PVTGLL Trigger: AAGGAGGCCCGTGACTGGGCAATTTCCAGAAACAGA...AAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTCGAGAGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGACGGGGATGCCCCTaGAGTCACACACAGCGTCCT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVRRGCP*SHTQRP Trigger: AGGACGCTGTGTGTGACTGCAGGGGCATCCCCGTCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTCGCTGACCCACAGTaGGATGGGGGTGCCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVFADPQ*DGGAPV Trigger: TACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCGGTGGAGAAGGGCATaGCCTTCACGCCTCTGTACA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVRWRRA*PSRLCT Trigger: TGTACAGAGGCGTGAAGGTCATGCCCTTCTCCACCG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPPSLR*PTVGWG Trigger: CCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCAAGGAGCGACTGCATaGAGGACAGAACCCAGCGGT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVQGATA*RTEPSG Trigger: ACCGCTGGGTTCTGTCCTTCATGCAGTCGCTCCTTG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGATGCTCCCGCTCTTCTaGAACCGCTCCAGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVMLPLF*NRSSSS Trigger: TGAGGAGCTGGAGCGGTTTCAGAAGAGCGGGAGCAT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGAGTGTGCTTCAAACTaGGCGGTCCCTCCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMECASN*AVPPVA Trigger: GGCCACGGGAGGGACCGCGCAGTTTGAAGCACACTC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | CAAACTCGCGCTTGCTCTCGAACGGATAATGGACCTGGGCATAGGGCATACTTCCCCAGTATCTGTTTCTaGAAATTGCCCAGTCACGGG | + |
Preference number: 4 (lower is better) Translates to: QTRACSRTDNGPGHRAYFPSICF*KLPSHG Trigger: CCCGTGACTGGGCAATTTCCAGAAACAGATACTGGG...GAAGTATGCCCTATGCCCAGGTCCATTATCCGTTCGAGAGCAAGCGCGAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTTCCCGCAGCGGGATaGGATGGTCAGGTGGTCGAT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVFPAAG*DGQVVD Trigger: ATCGACCACCTGACCATCCCATCCCGCTGCGGGAAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGTCCAAAGAGCGCTGTaGCTAGCACCAGCAGGGTGT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVVQRAL*LAPAGC Trigger: ACACCCTGCTGGTGCTAGCCACAGCGCTCTTTGGAC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGTCCCTCCCGTGGCCTaGTCAAAGGTGTACATGAGG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVVPPVA*SKVYMR Trigger: CCTCATGTACACCTTTGACCAGGCCACGGGAGGGAC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTCCACAGGTAAGCCGTaGCAGTCCCACCCGAATCTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSTGKP*QSHPNL Trigger: AAGATTCGGGTGGGACTGTCACGGCTTACCTGTGGA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCATCCTCCGGGCCTTTaGTGCCCAGTGTCTTATCGA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVHPPGL*CPVSYR Trigger: TCGATAAGACACTGGGCATCAAAGGCCCGGAGGATG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAATGAGGGGCGTGTCTaGCCTCCAGCAGAAAGGGTA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVNEGRV*PPAERV Trigger: TACCCTTTCTGCTGGAGGTCAGACACGCCCCTCATT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGAGCAGCACATCTTTaGGGACATCCCGCACACCTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVGAAHL*GHPAHL Trigger: AAGGTGTGCGGGATGTCCTCAAAGATGTGCTGCTCC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACAGCGTCCTCCCACTaGGGCTCAGCAAGTCAGTTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTASSH*GSASQF Trigger: AAACTGACTTGCTGAGCCTCAGTGGGAGGACGCTGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTGCAGGTTGAGGTACTaGCACAGCAGGGTGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMCRLRY*HSRVLG Trigger: CCCCAGCACCCTGCTGTGTCAGTACCTCAACCTGCA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACAGTGGGATGGGGGTaGCCCAGTATCTGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTVGWG*PSICFW Trigger: CCAGAAACAGATACTGGGGCACCCCCATCCCACTGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAGACGGGGATGCCCCTaGAGTCACACACAGCGTCCT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRRGCP*SHTQRP Trigger: AGGACGCTGTGTGTGACTGCAGGGGCATCCCCGTCT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACAGCCTTAGCCTCCTaGTCCTCAGTCCGAACACCT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTALAS*SSVRTP Trigger: AGGTGTTCGGACTGAGGAGCAGGAGGCTAAGGCTGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTCGAAGTTGGAGAGTaGAGTGCCACACGCGGTGGA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVFEVGE*SATRGG Trigger: TCCACCGCGTGTGGCACTCCACTCTCCAACTTCGAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTCGCTGACCCACAGTaGGATGGGGGTGCCCCAGTA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFADPQ*DGGAPV Trigger: TACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCGCAGCGGGATGGGATaGTCAGGTGGTCGATGCTCT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRSGMG*SGGRCS Trigger: AGAGCATCGACCACCTGACCATCCCATCCCGCTGCG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTGCACAAGCCCTTGGTaGGTGAGGCCGTTCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMCTSPW*VRPFCP Trigger: CGGACAGAACGGCCTCACCCACCAAGGGCTTGTGCA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCGGTGGAGAAGGGCATaGCCTTCACGCCTCTGTACA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRWRRA*PSRLCT Trigger: TGTACAGAGGCGTGAAGGTCATGCCCTTCTCCACCG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGATGCTCCCGCTCTTCTaGAACCGCTCCAGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMMLPLF*NRSSSS Trigger: TGAGGAGCTGGAGCGGTTTCAGAAGAGCGGGAGCAT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCCAGCAGCCGGCCCTaGTCCTTCAACATCCTAATG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMASSRP*SFNILM Trigger: CATTAGGATGTTGAAGGAGCAGGGCCGGCTGCTGGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAAGGGGCCATCAGTCTaGACAGAGAAAGCAGGACAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVKGPSV*TEKAGH Trigger: GTGTCCTGCTTTCTCTGTGCAGACTGATGGCCCCTT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACACTCTTGTGGCTCTaGGTTCAGGAGCTGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTLLWL*VQELQV Trigger: AACCTGCAGCTCCTGAACGCAGAGCCACAAGAGTGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTCCGAACACCTTGGCTaGTTCATGCACAAGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSEHLG*FMHKPL Trigger: CAAGGGCTTGTGCATGAAGCAGCCAAGGTGTTCGGA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | GGCATCCTCAAACTCGCGCTTGCTCTCGAACGGATAATGGACCTGGGCATAGGGTCGATGCTCTCTCTGTaGAGATCTGAGATTTTTGTT | + |
Preference number: 4 (lower is better) Translates to: GILKLALALERIMDLGIGSMLSL*RSEIFV Trigger: AACAAAAATCTCAGATCTCCACAGAGAGAGCATCGA...CCCTATGCCCAGGTCCATTATCCGTTCGAGAGCAAGCGCGAGTTTGAGGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTTCCCGCAGCGGGATaGGATGGTCAGGTGGTCGAT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFPAAG*DGQVVD Trigger: ATCGACCACCTGACCATCCCATCCCGCTGCGGGAAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGTCCCTCCCGTGGCCTaGTCAAAGGTGTACATGAGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMVPPVA*SKVYMR Trigger: CCTCATGTACACCTTTGACCAGGCCACGGGAGGGAC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTCCACAGGTAAGCCGTaGCAGTCCCACCCGAATCTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSTGKP*QSHPNL Trigger: AAGATTCGGGTGGGACTGTCACGGCTTACCTGTGGA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCATCCTCCGGGCCTTTaGTGCCCAGTGTCTTATCGA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMHPPGL*CPVSYR Trigger: TCGATAAGACACTGGGCATCAAAGGCCCGGAGGATG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTGGGTCTTGGTGGATaGCCACAATTTCCTTCAGAG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLGLGG*PQFPSE Trigger: CTCTGAAGGAAATTGTGGTCATCCACCAAGACCCAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGTGCACAACGCCTGTaGCTTCTTCATCCTTCACAT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVGAQRL*LLHPSH Trigger: ATGTGAAGGATGAAGAAGGCACAGGCGTTGTGCACC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACAGTGGGATGGGGGTaGCCCAGTATCTGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTVGWG*PSICFW Trigger: CCAGAAACAGATACTGGGGCACCCCCATCCCACTGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCTCCAGCTCCTCATTaGTCAGCCGCTTTATGGCCA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMAPAPH*SAALWP Trigger: TGGCCATAAAGCGGCTGAGCAATGAGGAGCTGGAGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCGAATGTCTTCCTCATaGAGTTCGTGGCCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVRMSSS*SSWPST Trigger: TGTGGAAGGCCACGAACTGCATGAGGAAGACATTCG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGCAACACTCCACCTTaGTCGGTGCCATTTGCACAA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSNTPP*SVPFAQ Trigger: TTGTGCAAATGGCACCGAGCAAGGTGGAGTGTTGCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACAGCCTTAGCCTCCTaGTCCTCAGTCCGAACACCT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTALAS*SSVRTP Trigger: AGGTGTTCGGACTGAGGAGCAGGAGGCTAAGGCTGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTGCAATCCCCATTTTaGCCACATCCTCCGGGCCTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLQSPF*PHPPGL Trigger: AAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTCGAAGTTGGAGAGTaGAGTGCCACACGCGGTGGA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFEVGE*SATRGG Trigger: TCCACCGCGTGTGGCACTCCACTCTCCAACTTCGAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTCCTCATGCAGTTCGTaGCCTTCCACAACAATGCTC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSSCSS*PSTTML Trigger: GAGCATTGTTGTGGAAGGCCACGAACTGCATGAGGA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTCTGTGAAGCAGCCTaGAGCATCCACAGGACAAAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLCEAA*SIHRTN Trigger: GTTTGTCCTGTGGATGCTTCAGGCTGCTTCACAGAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTCTCTGTGGAGATCTaGGATTTTTGTTCCCGACAG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLSVEI*DFCSRQ Trigger: CTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAACCATCCTCTGGTTTaGTCGATGCCTTCAGCAATG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVNHPLV*SMPSAM Trigger: CATTGCTGAAGGCATCGATCAAACCAGAGGATGGTT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGAGAAAGCAGGACACTaGACAGTGTCTCCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMEKAGH*TVSPEP Trigger: TGGCTCTGGAGACACTGTTCAGTGTCCTGCTTTCTC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGTCAAAGGTGTACATaGGGCGAATGTCTTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVGQRCT*GECLPH Trigger: ATGAGGAAGACATTCGCCTCATGTACACCTTTGACC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAAGAGAACTAGAGCCTaGGCATCAGAGTGTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVKRTRA*ASECAS Trigger: TGAAGCACACTCTGATGCTCAGGCTCTAGTTCTCTT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTGCTTGTTGTACTCTaGAATCCCCATTTTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLLVVL*NPHFGH Trigger: GTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACGATTGCTCGGCACTaGTTGTTGTACTCTGCAATC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTIARH*LLYSAI Trigger: GATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCCTTTGTCATACAGCTaGTTGAAGACCCACCAGACT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVPLSYS*LKTHQT Trigger: AGTCTGGTGGGTCTTCAAGCAGCTGTATGACAAAGG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGAAGCGCAGGTTTTCTaGTCTTACCACAGGGGAATT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVEAQVF*SYHRGI Trigger: AATTCCCCTGTGGTAAGAGCAGAAAACCTGCGCTTC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAAGCCAAGGAGCGACTaGATGAAGGACAGAACCCAG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMKPRSD*MKDRTQ Trigger: CTGGGTTCTGTCCTTCATGCAGTCGCTCCTTGGCTT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAAGGGGCCATCAGTCTaGACAGAGAAAGCAGGACAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMKGPSV*TEKAGH Trigger: GTGTCCTGCTTTCTCTGTGCAGACTGATGGCCCCTT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGGCCTTCCACAACAATaGTCCCGCTCTTCTGAAACC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMGLPQQ*SRSSET Trigger: GGTTTCAGAAGAGCGGGAGCATTGTTGTGGAAGGCC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACACTCTTGTGGCTCTaGGTTCAGGAGCTGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTLLWL*VQELQV Trigger: AACCTGCAGCTCCTGAACGCAGAGCCACAAGAGTGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTTCAAGCAGGAGGGTaGCCACAGTTCCTGTTAAAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVFQAGG*PQFLLN Trigger: GTTTAACAGGAACTGTGGGCACCCTCCTGCTTGAAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTCCGAACACCTTGGCTaGTTCATGCACAAGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSEHLG*FMHKPL Trigger: CAAGGGCTTGTGCATGAAGCAGCCAAGGTGTTCGGA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCACATTCTTGAAAGGTaGCTGTCCAAAGAGCGCTGT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVHILER*LSKERC Trigger: ACAGCGCTCTTTGGACAGCCACCTTTCAAGAATGTG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCTTCTGGGTCTTGGTaGATGACCACAATTTCCTTC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVASGSW*MTTISF Trigger: GAAGGAAATTGTGGTCATCCACCAAGACCCAGAAGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGAGCTTCTGGGTCTTaGTGGATGACCACAATTTCC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVRASGS*WMTTIS Trigger: GGAAATTGTGGTCATCCACCAAGACCCAGAAGCTCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTGGCTTCCGTTAAGATaGATAATTTTCCCCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVWLPLR*IIFPWP Trigger: TGGCCAGGGGAAAATTATTCATCTTAACGGAAGCCA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCACCATACTTATCGATaGTGGAAACTGGATCTGGGT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVHHTYR*WKLDLG Trigger: ACCCAGATCCAGTTTCCATCATCGATAAGTATGGTG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTGGGTCTTGGTGGATaGCCACAATTTCCTTCAGAG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLGLGG*PQFPSE Trigger: CTCTGAAGGAAATTGTGGTCATCCACCAAGACCCAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTGACTGGTCAGGTGTaGCATCTAAGAGAACTAGAG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLTGQV*HLRELE Trigger: CTCTAGTTCTCTTAGATGTCACACCTGACCAGTCAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTCTGTTTCTGGAAATTaGCCAGTCACGGGCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSVSGN*PVTGLL Trigger: AAGGAGGCCCGTGACTGGGCAATTTCCAGAAACAGA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCGAATGTCTTCCTCATaGAGTTCGTGGCCTTCCACA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRMSSS*SSWPST Trigger: TGTGGAAGGCCACGAACTGCATGAGGAAGACATTCG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCCAGTATCTGTTTCTaGAAATTGCCCAGTCACGGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPSICF*KLPSHG Trigger: CCCGTGACTGGGCAATTTCCAGAAACAGATACTGGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTCCTCATGCAGTTCGTaGCCTTCCACAACAATGCTC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSSCSS*PSTTML Trigger: GAGCATTGTTGTGGAAGGCCACGAACTGCATGAGGA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTTTGGCCTGAGTTTTaGCTGTTTGAGGCATTCCTG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLWPEF*LFEAFL Trigger: CAGGAATGCCTCAAACAGTCAAAACTCAGGCCAAAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACCAGACTGATTCCATaGACTGTGGGTATAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTRLIP*TVGIVF Trigger: AAACACTATACCCACAGTTCATGGAATCAGTCTGGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACTGTATTTCTGGATTaGCGCATAGTGCAAGGTTAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVTVFLD*RIVQGY Trigger: GTAACCTTGCACTATGCGTCAATCCAGAAATACAGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTCTCTGTGGAGATCTaGGATTTTTGTTCCCGACAG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLSVEI*DFCSRQ Trigger: CTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGAATATCTACAAACTTaGCCAGGCGAGGTACCACAG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMEYLQT*PGEVPQ Trigger: CTGTGGTACCTCGCCTGGTCAAGTTTGTAGATATTC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
||
CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAAGAGAACTAGAGCCTaGGCATCAGAGTGTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMKRTRA*ASECAS Trigger: TGAAGCACACTCTGATGCTCAGGCTCTAGTTCTCTT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTCACCGTGGAAGACTaGCAGCTTTGCATTTTTAAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVFTVED*QLCIFN Trigger: GTTAAAAATGCAAAGCTGTCAGTCTTCCACGGTGAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTGCTTGTTGTACTCTaGAATCCCCATTTTGGCCAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLLVVL*NPHFGH Trigger: GTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACGATTGCTCGGCACTaGTTGTTGTACTCTGCAATC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTIARH*LLYSAI Trigger: GATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCTTTGTCATACAGCTaGTTGAAGACCCACCAGACT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPLSYS*LKTHQT Trigger: AGTCTGGTGGGTCTTCAAGCAGCTGTATGACAAAGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTGCTCGGTGCCATTTaGACAAATGTTAAGGTTCAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLLGAI*TNVKVH Trigger: GTGAACCTTAACATTTGTGCAAATGGCACCGAGCAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTTCAAGCAGGAGGGTaGCCACAGTTCCTGTTAAAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFQAGG*PQFLLN Trigger: GTTTAACAGGAACTGTGGGCACCCTCCTGCTTGAAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGTAGAGTCCAAGGAGTaGTTGTCCAAGCAACTAAGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMVESKE*LSKQLR Trigger: CCTTAGTTGCTTGGACAACCACTCCTTGGACTCTAC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGATAGTGCAAGGTTACTaGGTAGAGTCCAAGGAGTGG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMIVQGY*VESKEW Trigger: CCACTCCTTGGACTCTACCCAGTAACCTTGCACTAT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCACATTCTTGAAAGGTaGCTGTCCAAAGAGCGCTGT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMHILER*LSKERC Trigger: ACAGCGCTCTTTGGACAGCCACCTTTCAAGAATGTG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGATGGAAACTGGATCTaGGTAGTTCTTTTTCCGCTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVDGNWI*VVLFPL Trigger: AAGCGGAAAAAGAACTACCCAGATCCAGTTTCCATC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGCAGCTTTAGATTCTaGTACATCAGCTCAGTCAGA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSSFRF*YISSVR Trigger: TCTGACTGAGCTGATGTACCAGAATCTAAAGCTGCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCTTCTGGGTCTTGGTaGATGACCACAATTTCCTTC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMASGSW*MTTISF Trigger: GAAGGAAATTGTGGTCATCCACCAAGACCCAGAAGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAGAGCTTCTGGGTCTTaGTGGATGACCACAATTTCC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRASGS*WMTTIS Trigger: GGAAATTGTGGTCATCCACCAAGACCCAGAAGCTCT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTGTTGGAACTGGATATaGCTTCAAGGGAGCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVCWNWI*LQGSFD Trigger: ATCAAAGCTCCCTTGAAGCCATATCCAGTTCCAACA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCCATCTGCAGTTGTTaGCAAGACAGAAACATATAC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVAICSC*QDRNIY Trigger: GTATATGTTTCTGTCTTGCCAACAACTGCAGATGGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTTCAGCAGGAAAACTaGTGTTTTCTGGAACTTGTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVLQQEN*CFLELV Trigger: AACAAGTTCCAGAAAACATCAGTTTTCCTGCTGAAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTGGCTTCCGTTAAGATaGATAATTTTCCCCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMWLPLR*IIFPWP Trigger: TGGCCAGGGGAAAATTATTCATCTTAACGGAAGCCA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGGACTGAGTCTTTCTaGATAATGTTGAAGTCCATA | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVGTESF*IMLKSI Trigger: TATGGACTTCAACATTATTCAGAAAGACTCAGTCCC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGGACAAACAGGGACTaGGTCTTTCTGAATAATGTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVRTNRD*VFLNNV Trigger: AACATTATTCAGAAAGACTCAGTCCCTGTTTGTCCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCACCATACTTATCGATaGTGGAAACTGGATCTGGGT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMHHTYR*WKLDLG Trigger: ACCCAGATCCAGTTTCCATCATCGATAAGTATGGTG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTGACTGGTCAGGTGTaGCATCTAAGAGAACTAGAG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLTGQV*HLRELE Trigger: CTCTAGTTCTCTTAGATGTCACACCTGACCAGTCAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGTAATTTCTTGTGTTTaGGTCTCATTCAGGAACAGC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVVISCV*VSFRNS Trigger: GCTGTTCCTGAATGAGACTCAAACACAAGAAATTAC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGTATCTCATCACGATTaGTCGGCACTGCTTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMVSHHD*SALLVV Trigger: TACAACAAGCAGTGCCGAGCAATCGTGATGAGATAC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTCGATGCTCTCTCTGTaGAGATCTGAGATTTTTGTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVSMLSL*RSEIFV Trigger: AACAAAAATCTCAGATCTCCACAGAGAGAGCATCGA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACCAGACTGATTCCATaGACTGTGGGTATAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTRLIP*TVGIVF Trigger: AAACACTATACCCACAGTTCATGGAATCAGTCTGGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGACTGTATTTCTGGATTaGCGCATAGTGCAAGGTTAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMTVFLD*RIVQGY Trigger: GTAACCTTGCACTATGCGTCAATCCAGAAATACAGT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCCTGGCCACATCTTTaGTCTTCACATACTGTATTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPWPHL*SSHTVF Trigger: AAATACAGTATGTGAAGATCAAAGATGTGGCCAGGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTCACAATCACATTCTTaGAAGGTGGCTGTCCAAAGA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSQSHS*KVAVQR Trigger: TCTTTGGACAGCCACCTTTCAAGAATGTGATTGTGA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCAGTGTGGCTTTCAATaGCATTATTCAAGTATCTTC | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVQCGFQ*HYSSIF Trigger: GAAGATACTTGAATAATGTCATTGAAAGCCACACTG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTCACCGTGGAAGACTaGCAGCTTTGCATTTTTAAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFTVED*QLCIFN Trigger: GTTAAAAATGCAAAGCTGTCAGTCTTCCACGGTGAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR GCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTGCTCGGTGCCATTTaGACAAATGTTAAGGTTCAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLLGAI*TNVKVH Trigger: GTGAACCTTAACATTTGTGCAAATGGCACCGAGCAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGATCGATGATGGAAACTaGATCTGGGTAGTTCTTTTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVIDDGN*IWVVLF Trigger: AAAAAGAACTACCCAGATCCAGTTTCCATCATCGAT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCAGAGGATACTTTATTaGAATAGTTTTTCGGTCTCG | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVQRILY*NSFSVS Trigger: CGAGACCGAAAAACTATTCCAATAAAGTATCCTCTG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTCTTTCGAAGCTTCTaGATGCGATTGATGACTTCC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFFRSF*MRLMTS Trigger: GGAAGTCATCAATCGCATCCAGAAGCTTCGAAAGAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTGTTATTTCATCCGTTaGAACCAGATTGCACTTCTT | + |
Preference number: 4 (lower is better) Translates to: RETERERERERHRECECVCYFIR*NQIALL Trigger: AAGAAGTGCAATCTGGTTCCAACGGATGAAATAACA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCCATCTGCAGTTGTTaGCAAGACAGAAACATATAC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMAICSC*QDRNIY Trigger: GTATATGTTTCTGTCTTGCCAACAACTGCAGATGGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTTCAGCAGGAAAACTaGTGTTTTCTGGAACTTGTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLQQEN*CFLELV Trigger: AACAAGTTCCAGAAAACATCAGTTTTCCTGCTGAAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGAATGTTACAAATACTaGGGGATCCTGAACATCCTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMECYKY*GILNIL Trigger: AAGGATGTTCAGGATCCCTCAGTATTTGTAACATTC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGGGACTGAGTCTTTCTaGATAATGTTGAAGTCCATA | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMGTESF*IMLKSI Trigger: TATGGACTTCAACATTATTCAGAAAGACTCAGTCCC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAGGACAAACAGGGACTaGGTCTTTCTGAATAATGTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRTNRD*VFLNNV Trigger: AACATTATTCAGAAAGACTCAGTCCCTGTTTGTCCT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR TCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCATTTAATTCCTCAATaGTATACTTCTCCAAGGACC | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMHLIPQ*YTSPRT Trigger: GGTCCTTGGAGAAGTATATCATTGAGGAATTAAATG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCAGAGGATACTTTATTaGAATAGTTTTTCGGTCTCG | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMQRILY*NSFSVS Trigger: CGAGACCGAAAAACTATTCCAATAAAGTATCCTCTG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CCA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTGTTATTTCATCCGTTaGAACCAGATTGCACTTCTT | + |
Preference number: 4 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMCYFIR*NQIALL Trigger: AAGAAGTGCAATCTGGTTCCAACGGATGAAATAACA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS GCA 90 bp | ACTCTCGAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTaGTTTCCCGCAGCGGGATGGGATGGTCAGGTGGTCGATGCTCTC | + |
Preference number: 5 (lower is better) Translates to: TLEPAVKHLRDAPQW*FPAAGWDGQVVDAL Trigger: GAGAGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTCGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | TCCACTCTCGAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATaGTGCTTTCCCGCAGCGGGATGGGATGGTCAGGTGGTCGATGCT | + |
Preference number: 5 (lower is better) Translates to: STLEPAVKHLRDAPQ*CFPAAGWDGQVVDA Trigger: AGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTCGAGAGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 90 bp | TCAGTCCGAACACCTTGGCTGCTTCATGCACAAGCCCTTGGTGGGTaGGGCCGTTCTGTCCGAGTGGGTTTTCAAGCAGGAGGGTGCCCA | + |
Preference number: 5 (lower is better) Translates to: SVRTPWLLHAQALGG*GRSVRVGFQAGGCP Trigger: TGGGCACCCTCCTGCTTGAAAACCCACTCGGACAGAACGGCCTCACCCACCAAGGGCTTGTGCATGAAGCAGCCAAGGTGTTCGGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | CTGCTCCTCAGTCCGAACACCTTGGCTGCTTCATGCACAAGCCCTTaGTGGGTGAGGCCGTTCTGTCCGAGTGGGTTTTCAAGCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: LLLSPNTLAASCTSP*WVRPFCPSGFSSRR Trigger: CCTCCTGCTTGAAAACCCACTCGGACAGAACGGCCTCACCCACCAAGGGCTTGTGCATGAAGCAGCCAAGGTGTTCGGACTGAGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | ACGCGCCGCAATGGTGCTTTCCCGCAGCGGGATGGGATGGTCAGGTaGTCGATGCTCTCTCTGTGGAGATCTGAGATTTTTGTTCCCGAC | + |
Preference number: 5 (lower is better) Translates to: TRRNGAFPQRDGMVR*SMLSLWRSEIFVPD Trigger: GTCGGGAACAAAAATCTCAGATCTCCACAGAGAGAGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 90 bp | ATTCGAAGTTGGAGAGTGGAGTGCCACACGCGGTGGAGAAGGGCATaGCCTTCACGCCTCTGTACACGAGGCCTTTGTCATACAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: IRSWRVECHTRWRRA*PSRLCTRGLCHTAA Trigger: AGCAGCTGTATGACAAAGGCCTCGTGTACAGAGGCGTGAAGGTCATGCCCTTCTCCACCGCGTGTGGCACTCCACTCTCCAACTTCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 90 bp | CTTCAAACTGCGCGGTCCCTCCCGTGGCCTGGTCAAAGGTGTACATaGGGCGAATGTCTTCCTCATGCAGTTCGTGGCCTTCCACAACAA | + |
Preference number: 5 (lower is better) Translates to: LQTARSLPWPGQRCT*GECLPHAVRGLPQQ Trigger: TTGTTGTGGAAGGCCACGAACTGCATGAGGAAGACATTCGCCTCATGTACACCTTTGACCAGGCCACGGGAGGGACCGCGCAGTTTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | CCACTGATCCAATGCACACTCCTCCAAGTCTTCGCTGACCCACAGTaGGATGGGGGTGCCCCAGTATCTGTTTCTGGAAATTGCCCAGTC | + |
Preference number: 5 (lower is better) Translates to: PLIQCTLLQVFADPQ*DGGAPVSVSGNCPV Trigger: GACTGGGCAATTTCCAGAAACAGATACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGGAGTGTGCATTGGATCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR CAA 90 bp | GGCATCCTCAAACTCGCGCTTGCTCTCGAACGGATAATGGACCTGGGCATAGGGATCTGTTTCTGGAAATaGCCCAGTCACGGGCCTCCT | + |
Preference number: 5 (lower is better) Translates to: GILKLALALERIMDLGIGICFWK*PSHGPP Trigger: AGGAGGCCCGTGACTGGGCAATTTCCAGAAACAGAT...CCCTATGCCCAGGTCCATTATCCGTTCGAGAGCAAGCGCGAGTTTGAGGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS TCA 90 bp | TCAAGCTCTGCCACTGATCCAATGCACACTCCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGGTGCCCCAGTATCTGTTTCTGGAAA | + |
Preference number: 5 (lower is better) Translates to: SSSATDPMHTPPSLR*PTVGWGCPSICFWK Trigger: TTTCCAGAAACAGATACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGGAGTGTGCATTGGATCAGTGGCAGAGCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS GCA 90 bp | AGCGGAGTATCTCATCACGATTGCTCGGCACTGCTTGTTGTACTCTaGAATCCCCATTTTGGCCACATCCTCCGGGCCTTTGATGCCCAG | + |
Preference number: 5 (lower is better) Translates to: SGVSHHDCSALLVVL*NPHFGHILRAFDAQ Trigger: CTGGGCATCAAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCCATCATCACCGCTTaGAAGGCCCCCTTCAGGCGC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVAIITA*KAPFRR Trigger: GCGCCTGAAGGGGGCCTTCAAAGCGGTGATGATGGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS GCA 90 bp | GTAGACTTCCACTCAGCGGAGTATCTCATCACGATTGCTCGGCACTaGTTGTTGTACTCTGCAATCCCCATTTTGGCCACATCCTCCGGG | + |
Preference number: 5 (lower is better) Translates to: VDFHSAEYLITIARH*LLYSAIPILATSSG Trigger: CCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTGGAAGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | CAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTGCTTTCCCGCAGCGGGATGGAGATCTGAGATTTTaGTTCCCGACAGTTCTTCAA | + |
Preference number: 5 (lower is better) Translates to: QQSNTSETRRNGAFPQRDGDLRF*FPTVLQ Trigger: TTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCC...ATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCGCTCCAGCTCCTCATaGCTCAGCCGCTTTATGGCC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVRSSSS*LSRFMA Trigger: GGCCATAAAGCGGCTGAGCAATGAGGAGCTGGAGCG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGGAGCAGCACATCTTaGAGGACATCCCGCACACCT | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVGSSTS*RTSRTP Trigger: AGGTGTGCGGGATGTCCTCAAAGATGTGCTGCTCCC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCCATCATCACCGCTTaGAAGGCCCCCTTCAGGCGC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMAIITA*KAPFRR Trigger: GCGCCTGAAGGGGGCCTTCAAAGCGGTGATGATGGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS TCA 90 bp | TGTTGTACTCTGCAATCCCCATTTTGGCCACATCCTCCGGGCCTTTaGTGCCCAGTGTCTTATCGATTTCGTACTCCACAGGTAAGCCGT | + |
Preference number: 5 (lower is better) Translates to: CCTLQSPFWPHPPGL*CPVSYRFRTPQVSR Trigger: ACGGCTTACCTGTGGAGTACGAAATCGATAAGACACTGGGCATCAAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 90 bp | ATCACCGCTTTGAAGGCCCCCTTCAGGCGCTTCCCAAGGACCATGTaGTCTGGTTCAGCCCTTAGTCGGATACCGTACTTGTTTTTATCA | + |
Preference number: 5 (lower is better) Translates to: ITALKAPFRRFPRTM*SGSALSRIPYLFLS Trigger: TGATAAAAACAAGTACGGTATCCGACTAAGGGCTGAACCAGATCACATGGTCCTTGGGAAGCGCCTGAAGGGGGCCTTCAAAGCGGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | ATCCTGAACATCCTTGTAATTCTGGTTAGATTCGAAGTTGGAGAGTaGAGTGCCACACGCGGTGGAGAAGGGCATGACCTTCACGCCTCT | + |
Preference number: 5 (lower is better) Translates to: ILNILVILVRFEVGE*SATRGGEGHDLHAS Trigger: AGAGGCGTGAAGGTCATGCCCTTCTCCACCGCGTGTGGCACTCCACTCTCCAACTTCGAATCTAACCAGAATTACAAGGATGTTCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | GCAGTCACACACAGCGTCCTCCCACTGAGGCTCAGCAAGTCAGTTTaGTTCTGTATTTCTGTTTCACCGTGGAAGACTGACAGCTTTGCA | + |
Preference number: 5 (lower is better) Translates to: AVTHSVLPLRLSKSV*FCISVSPWKTDSFA Trigger: TGCAAAGCTGTCAGTCTTCCACGGTGAAACAGAAATACAGAACCAAACTGACTTGCTGAGCCTCAGTGGGAGGACGCTGTGTGTGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGACATCCTCCGGGCCTTaGATGCCCAGTGTCTTATCG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVTSSGP*MPSVLS Trigger: CGATAAGACACTGGGCATCAAAGGCCCGGAGGATGT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCGCACACCTTCCTCCTaGAAGCGCAGGTTTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVRTPSS*KRRFSA Trigger: AGCAGAAAACCTGCGCTTCAAGGAGGAAGGTGTGCG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGATGCTGAGTGTGTCCTaGTCCCGGAGAGAAGCAGGA | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVMLSVS*SRREAG Trigger: TCCTGCTTCTCTCCGGGACAAGGACACACTCAGCAT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCGCTCCAGCTCCTCATaGCTCAGCCGCTTTATGGCC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRSSSS*LSRFMA Trigger: GGCCATAAAGCGGCTGAGCAATGAGGAGCTGGAGCG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTCAGTCCGAACACCTaGGCTGCTTCATGCACAAGC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVLSPNT*AASCTS Trigger: GCTTGTGCATGAAGCAGCCAAGGTGTTCGGACTGAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS GCA 90 bp | TCTGGTAACAGTAGACTTCCACTCAGCGGAGTATCTCATCACGATTaGTCGGCACTGCTTGTTGTACTCTGCAATCCCCATTTTGGCCAC | + |
Preference number: 5 (lower is better) Translates to: SGNSRLPLSGVSHHD*SALLVVLCNPHFGH Trigger: GTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTGGAAGTCTACTGTTACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGATTGCTCGGCACTGCTaGTTGTACTCTGCAATCCCC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVIARHC*LYSAIP Trigger: GGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAAT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGGGAGCAGCACATCTTaGAGGACATCCCGCACACCT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMGSSTS*RTSRTP Trigger: AGGTGTGCGGGATGTCCTCAAAGATGTGCTGCTCCC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS GCA 90 bp | GACAGAACCCAGCGGTCGGTGATGTTAGGGCTTTCTCTGACTGTATaGTCGTTGTATAGGAACTTCACTTCTTCTTCCTTGTGGAGCCTA | + |
Preference number: 5 (lower is better) Translates to: DRTQRSVMLGLSLTV*SLYRNFTSSSLWSL Trigger: TAGGCTCCACAAGGAAGAAGAAGTGAAGTTCCTATACAACGAGCATACAGTCAGAGAAAGCCCTAACATCACCGACCGCTGGGTTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCGCACACCTTCCTCCTaGAAGCGCAGGTTTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMRTPSS*KRRFSA Trigger: AGCAGAAAACCTGCGCTTCAAGGAGGAAGGTGTGCG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGATGCTGAGTGTGTCCTaGTCCCGGAGAGAAGCAGGA | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMMLSVS*SRREAG Trigger: TCCTGCTTCTCTCCGGGACAAGGACACACTCAGCAT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTCAGTCCGAACACCTaGGCTGCTTCATGCACAAGC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLSPNT*AASCTS Trigger: GCTTGTGCATGAAGCAGCCAAGGTGTTCGGACTGAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS TCA 90 bp | CCAAATACGCTGGTAACAACAGTCTTCAGTTTCACCAGGTTCAGCTaGTTATCACCTTTCGGATTCTCCAGGAGCAACACTCCACCTTGC | + |
Preference number: 5 (lower is better) Translates to: PNTLVTTVFSFTRFS*LSPFGFSRSNTPPC Trigger: GCAAGGTGGAGTGTTGCTCCTGGAGAATCCGAAAGGTGATAATCAGCTGAACCTGGTGAAACTGAAGACTGTTGTTACCAGCGTATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCTCGGCACTGCTTGTaGTACTCTGCAATCCCCATT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMARHCL*YSAIPI Trigger: AATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGATCTGTTTCTGGAAATaGCCCAGTCACGGGCCTCCT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMICFWK*PSHGPP Trigger: AGGAGGCCCGTGACTGGGCAATTTCCAGAAACAGAT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCGTTCTCAGTTTTCTaGTCAATCAGCTCCTCTCGA | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVAFSVF*SISSSR Trigger: TCGAGAGGAGCTGATTGACAAGAAAACTGAGAACGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTGAGTTTTGACTGTTaGAGGCATTCCTGGAAACAG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVLSFDC*RHSWKQ Trigger: CTGTTTCCAGGAATGCCTCAAACAGTCAAAACTCAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCCCCTGGCCACATCTTaGATCTTCACATACTGTATT | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVPLATS*IFTYCI Trigger: AATACAGTATGTGAAGATCAAAGATGTGGCCAGGGG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTGTATTTCTTGCCTTaGAGAGAGGCACCAGGAAAC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVLYFLP*REAPGN Trigger: GTTTCCTGGTGCCTCTCTCAAAGGCAAGAAATACAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAAACCATCCTCTGGTTaGATCGATGCCTTCAGCAAT | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVKPSSG*IDAFSN Trigger: ATTGCTGAAGGCATCGATCAAACCAGAGGATGGTTT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTTACCACAGGGGAATaGATCAGATATAACCTGAGG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVLTTGE*IRYNLR Trigger: CCTCAGGTTATATCTGATCAATTCCCCTGTGGTAAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTCACTTCTTCTTCCTaGTGGAGCCTAAAGACGTTC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVFTSSS*WSLKTF Trigger: GAACGTCTTTAGGCTCCACAAGGAAGAAGAAGTGAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGAGAATATCTACAAACTaGACCAGGCGAGGTACCACA | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVRISTN*TRRGTT Trigger: TGTGGTACCTCGCCTGGTCAAGTTTGTAGATATTCT...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGCTTCAAGGGAGCTTaGATTGTGGCAAATATGAAG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVGFKGA*IVANMK Trigger: CTTCATATTTGCCACAATCAAAGCTCCCTTGAAGCC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS TCA 90 bp | TCCTGTTCATTCGGACATACCAGTTGGTTAGAATATCTACAAACTTaGCCAGGCGAGGTACCACAGTGTACAGCCTGTAAGCTGCCATTT | + |
Preference number: 5 (lower is better) Translates to: SCSFGHTSWLEYLQT*PGEVPQCTACKLPF Trigger: AAATGGCAGCTTACAGGCTGTACACTGTGGTACCTCGCCTGGTCAAGTTTGTAGATATTCTAACCAACTGGTATGTCCGAATGAACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAGTATCTCATCACGATaGCTCGGCACTGCTTGTTGT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSISSR*LGTACC Trigger: ACAACAAGCAGTGCCGAGCAATCGTGATGAGATACT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTGTCATACAGCTGCTaGAAGACCCACCAGACTGAT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLSYSC*KTHQTD Trigger: ATCAGTCTGGTGGGTCTTCAAGCAGCTGTATGACAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGGAGATCTGAGATTTTaGTTCCCGACAGTTCTTCAA | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVGDLRF*FPTVLQ Trigger: TTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTTCACAATCACATTCTaGAAAGGTGGCTGTCCAAAG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVFTITF*KGGCPK Trigger: CTTTGGACAGCCACCTTTCAAGAATGTGATTGTGAA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCGCTTGCTCATTTTTaGGCCATCACTTGCCAAGAT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPLAHF*AITCQD Trigger: ATCTTGGCAAGTGATGGCCAAAAAATGAGCAAGCGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGCTGTTATTTCATCCGTaGGAACCAGATTGCACTTCT | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVLLFHP*EPDCTS Trigger: AGAAGTGCAATCTGGTTCCAACGGATGAAATAACAG...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGGCTCAGCAAGTCAGTTaGGTTCTGTATTTCTGTTTC | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVAQQVS*VLYFCF Trigger: GAAACAGAAATACAGAACCAAACTGACTTGCTGAGC...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTGAGTTTTGACTGTTaGAGGCATTCCTGGAAACAG | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLSFDC*RHSWKQ Trigger: CTGTTTCCAGGAATGCCTCAAACAGTCAAAACTCAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCCCCTGGCCACATCTTaGATCTTCACATACTGTATT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMPLATS*IFTYCI Trigger: AATACAGTATGTGAAGATCAAAGATGTGGCCAGGGG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTGTATTTCTTGCCTTaGAGAGAGGCACCAGGAAAC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLYFLP*REAPGN Trigger: GTTTCCTGGTGCCTCTCTCAAAGGCAAGAAATACAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAAACCATCCTCTGGTTaGATCGATGCCTTCAGCAAT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMKPSSG*IDAFSN Trigger: ATTGCTGAAGGCATCGATCAAACCAGAGGATGGTTT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTTACCACAGGGGAATaGATCAGATATAACCTGAGG | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLTTGE*IRYNLR Trigger: CCTCAGGTTATATCTGATCAATTCCCCTGTGGTAAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTTCACTTCTTCTTCCTaGTGGAGCCTAAAGACGTTC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMFTSSS*WSLKTF Trigger: GAACGTCTTTAGGCTCCACAAGGAAGAAGAAGTGAA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGGCTTCAAGGGAGCTTaGATTGTGGCAAATATGAAG | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMGFKGA*IVANMK Trigger: CTTCATATTTGCCACAATCAAAGCTCCCTTGAAGCC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS TCA 90 bp | GTGAGCGTGATTTCCAGCTCGGACCCCTTTAACTGTGTTTGCTCTTaGATAAGGATATTATCTGATGTTGGAACTGGATATGGCTTCAAG | + |
Preference number: 5 (lower is better) Translates to: VSVISSSDPFNCVCS*IRILSDVGTGYGFK Trigger: CTTGAAGCCATATCCAGTTCCAACATCAGATAATATCCTTATTCAAGAGCAAACACAGTTAAAGGGGTCCGAGCTGGAAATCACGCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGCTGTTATTTCATCCGTaGGAACCAGATTGCACTTCT | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMLLFHP*EPDCTS Trigger: AGAAGTGCAATCTGGTTCCAACGGATGAAATAACAG...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGGCTCAGCAAGTCAGTTaGGTTCTGTATTTCTGTTTC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMAQQVS*VLYFCF Trigger: GAAACAGAAATACAGAACCAAACTGACTTGCTGAGC...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACATAGAGAGTGTGAGTGTGTGTGTAATTTCTTGTGTTaGAGTCTCATTCAGGAACAG | + |
Preference number: 5 (lower is better) Translates to: RETERERERERHRECECVCNFLC*SLIQEQ Trigger: CTGTTCCTGAATGAGACTCAAACACAAGAAATTACA...CACACACTCACACTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGAGCCATCTGCAGTTGTaGGCAAGACAGAAACATATA | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMSHLQL*ARQKHI Trigger: TATATGTTTCTGTCTTGCCAACAACTGCAGATGGCT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS CCA 90 bp | ATATACTTCTCCAAGGACCTGATATCCTCTAGAGCTTCTGGGTCTTaGTGGATGACCACAATTTCCTTCAGAGGATACTTTATTGGAATA | + |
Preference number: 5 (lower is better) Translates to: IYFSKDLISSRASGS*WMTTISFRGYFIGI Trigger: TATTCCAATAAAGTATCCTCTGAAGGAAATTGTGGTCATCCACCAAGACCCAGAAGCTCTAGAGGATATCAGGTCCTTGGAGAAGTATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGATTCGGACATACCAGTaGGTTAGAATATCTACAAAC | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMIRTYQ*VRISTN Trigger: GTTTGTAGATATTCTAACCAACTGGTATGTCCGAAT...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS-3UTR CAA 90 bp | TATAGAAATAAGCTTCGTGGTGTTGAGGTAACATTGGGACACTCCCCCAACATGTGTAATTTCTTGTGTTaGAGTCTCATTCAGGAACAG | + |
Preference number: 5 (lower is better) Translates to: YRNKLRGVEVTLGHSPNMCNFLC*SLIQEQ Trigger: CTGTTCCTGAATGAGACTCAAACACAAGAAATTACA...CATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCACGAAGCTTATTTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047363.14 ENSMUST00000165316.8 |
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CDS CCA 90 bp | TCTTCCTTCAGATTTTGCATTATAGTAAACTGTTATTTCATCCGTTaGAACCAGATTGCACTTCTTTCGAAGCTTCTGGATGCGATTGAT | + |
Preference number: 5 (lower is better) Translates to: SSFRFCIIVNCYFIR*NQIALLSKLLDAID Trigger: ATCAATCGCATCCAGAAGCTTCGAAAGAAGTGCAATCTGGTTCCAACGGATGAAATAACAGTTTACTATAATGCAAAATCTGAAGGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 90 bp | TATGGCTTCAAGGGAGCTTTGATTGTGGCAAATATGAAGTCAGTGTaGCTTTCAATGACATTATTCAAGTATCTTCCTTCAGATTTTGCA | + |
Preference number: 5 (lower is better) Translates to: YGFKGALIVANMKSV*LSMTLFKYLPSDFA Trigger: TGCAAAATCTGAAGGAAGATACTTGAATAATGTCATTGAAAGCCACACTGACTTCATATTTGCCACAATCAAAGCTCCCTTGAAGCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GCGTGTCTGACCTCCAGCAGAAAGGGTAGCTGTGAGTaGACGTGCCCGCCGCCAGCAGCCGGCCCTGCTCCT | + |
Preference number: 6 (lower is better) Translates to: ACLTSSRKGSCE*TCPPPAAGPAP Trigger: AGGAGCAGGGCCGGCTGCTGGCGGCGGGCACGTTCACTCACAGCTACCCTTTCTGCTGGAGGTCAGACACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CAGCAGGGTGCTGGGGCTGCTGATGGGAGACGGGGATaGCCCTGCAGTCACACACAGCGTCCTCCCACTGAG | + |
Preference number: 6 (lower is better) Translates to: QQGAGAADGRRG*PCSHTQRPPTE Trigger: CTCAGTGGGAGGACGCTGTGTGTGACTGCAGGGGCATCCCCGTCTCCCATCAGCAGCCCCAGCACCCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CCAGCAGTCAAACACCTCAGAGACGCGCCGCAATGGTaGTTTCCCGCAGCGGGATGGGATGGTCAGGTGGTC | + |
Preference number: 6 (lower is better) Translates to: PAVKHLRDAPQW*FPAAGWDGQVV Trigger: GACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | CGCGCCGCAATGGTGCTTTCCCGCAGCGGGATGGGATaGTCAGGTGGTCGATGCTCTCTCTGTGGAGATCTG | + |
Preference number: 6 (lower is better) Translates to: RAAMVLSRSGMG*SGGRCSLCGDL Trigger: CAGATCTCCACAGAGAGAGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | AGAGACGCGCCGCAATGGTGCTTTCCCGCAGCGGGATaGGATGGTCAGGTGGTCGATGCTCTCTCTGTGGAG | + |
Preference number: 6 (lower is better) Translates to: RDAPQWCFPAAG*DGQVVDALSVE Trigger: CTCCACAGAGAGAGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | GAACCAGCAGTCAAACACCTCAGAGACGCGCCGCAATaGTGCTTTCCCGCAGCGGGATGGGATGGTCAGGTG | + |
Preference number: 6 (lower is better) Translates to: EPAVKHLRDAPQ*CFPAAGWDGQV Trigger: CACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATTGCGGCGCGTCTCTGAGGTGTTTGACTGCTGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GCGCGGTCCCTCCCGTGGCCTGGTCAAAGGTGTACATaGGGCGAATGTCTTCCTCATGCAGTTCGTGGCCTT | + |
Preference number: 6 (lower is better) Translates to: ARSLPWPGQRCT*GECLPHAVRGL Trigger: AAGGCCACGAACTGCATGAGGAAGACATTCGCCTCATGTACACCTTTGACCAGGCCACGGGAGGGACCGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | TGGAGAGTGGAGTGCCACACGCGGTGGAGAAGGGCATaGCCTTCACGCCTCTGTACACGAGGCCTTTGTCAT | + |
Preference number: 6 (lower is better) Translates to: WRVECHTRWRRA*PSRLCTRGLCH Trigger: ATGACAAAGGCCTCGTGTACAGAGGCGTGAAGGTCATGCCCTTCTCCACCGCGTGTGGCACTCCACTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GCCACTGATCCAATGCACACTCCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGGTGCCCCAGTATCTGT | + |
Preference number: 6 (lower is better) Translates to: ATDPMHTPPSLR*PTVGWGCPSIC Trigger: ACAGATACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGGAGTGTGCATTGGATCAGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS CCA 72 bp | CCCACAGTGGGATGGGGGTGCCCCAGTATCTGTTTCTaGAAATTGCCCAGTCACGGGCCTCCTTCAGCCAAT | + |
Preference number: 6 (lower is better) Translates to: PTVGWGCPSICF*KLPSHGPPSAN Trigger: ATTGGCTGAAGGAGGCCCGTGACTGGGCAATTTCCAGAAACAGATACTGGGGCACCCCCATCCCACTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 ENSMUST00000171510.2 |
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CDS TCA 72 bp | CTGATCCAATGCACACTACCTCCTCCAAGTCTTCGCTaGCCCACAGTGGGATGGGGGTGCCCCAGTATCTGT | + |
Preference number: 6 (lower is better) Translates to: LIQCTLPPPSLR*PTVGWGCPSIC Trigger: ACAGATACTGGGGCACCCCCATCCCACTGTGGGTCAGCGAAGACTTGGAGGAGGTAGTGTGCATTGGATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | CATTGCTCAGCCGCTTTATGGCCATCATCACCGCTTTaGAGGCCCCCTTCAGGCGCTTCCCAAGGACCATGT | + |
Preference number: 6 (lower is better) Translates to: HCSAALWPSSPL*RPPSGASQGPC Trigger: ACATGGTCCTTGGGAAGCGCCTGAAGGGGGCCTTCAAAGCGGTGATGATGGCCATAAAGCGGCTGAGCAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | ACACCTTGGCTGCTTCATGCACAAGCCCTTGGTGGGTaGGGCCGTTCTGTCCGAGTGGGTTTTCAAGCAGGA | + |
Preference number: 6 (lower is better) Translates to: TPWLLHAQALGG*GRSVRVGFQAG Trigger: TCCTGCTTGAAAACCCACTCGGACAGAACGGCCTCACCCACCAAGGGCTTGTGCATGAAGCAGCCAAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | GAGTGTGCTTCAAACTGCGCGGTCCCTCCCGTGGCCTaGTCAAAGGTGTACATGAGGCGAATGTCTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: ECASNCAVPPVA*SKVYMRRMSSS Trigger: TGAGGAAGACATTCGCCTCATGTACACCTTTGACCAGGCCACGGGAGGGACCGCGCAGTTTGAAGCACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | AGTCCGAACACCTTGGCTGCTTCATGCACAAGCCCTTaGTGGGTGAGGCCGTTCTGTCCGAGTGGGTTTTCA | + |
Preference number: 6 (lower is better) Translates to: SPNTLAASCTSP*WVRPFCPSGFS Trigger: TGAAAACCCACTCGGACAGAACGGCCTCACCCACCAAGGGCTTGTGCATGAAGCAGCCAAGGTGTTCGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | TCATTGCTCAGCCGCTTTATGGCCATCATCACCGCTTaGAAGGCCCCCTTCAGGCGCTTCCCAAGGACCATG | + |
Preference number: 6 (lower is better) Translates to: SLLSRFMAIITA*KAPFRRFPRTM Trigger: CATGGTCCTTGGGAAGCGCCTGAAGGGGGCCTTCAAAGCGGTGATGATGGCCATAAAGCGGCTGAGCAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | GGCCGTTCTGTCCGAGTGGGTTTTCAAGCAGGAGGGTaGCCACAGTTCCTGTTAAACACTCTTGTGGCTCTG | + |
Preference number: 6 (lower is better) Translates to: GRSVRVGFQAGG*PQFLLNTLVAL Trigger: CAGAGCCACAAGAGTGTTTAACAGGAACTGTGGGCACCCTCCTGCTTGAAAACCCACTCGGACAGAACGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | GACTTCCACTCAGCGGAGTATCTCATCACGATTGCTCGGCACTGCTaGTTGTACTCTGCAATCCCCATTTTGGCCACATCCTCCGGGCCT | + |
Preference number: 6 (lower is better) Translates to: DFHSAEYLITIARHC*LYSAIPILATSSGP Trigger: AGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | GCTGCCATTTCGGTCTCAAAGAAGCCAAGGAGCGACTaGATGAAGGACAGAACCCAGCGGTCGGTGATGTTA | + |
Preference number: 6 (lower is better) Translates to: AAISVSKKPRSD*MKDRTQRSVML Trigger: TAACATCACCGACCGCTGGGTTCTGTCCTTCATGCAGTCGCTCCTTGGCTTCTTTGAGACCGAAATGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | TGTCTTCCTCATGCAGTTCGTGGCCTTCCACAACAATaGTCCCGCTCTTCTGAAACCGCTCCAGCTCCTCAT | + |
Preference number: 6 (lower is better) Translates to: CLPHAVRGLPQQ*SRSSETAPAPH Trigger: ATGAGGAGCTGGAGCGGTTTCAGAAGAGCGGGAGCATTGTTGTGGAAGGCCACGAACTGCATGAGGAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | TTCCACTCAGCGGAGTATCTCATCACGATTGCTCGGCACTGCTTGTaGTACTCTGCAATCCCCATTTTGGCCACATCCTCCGGGCCTTTG | + |
Preference number: 6 (lower is better) Translates to: FHSAEYLITIARHCL*YSAIPILATSSGPL Trigger: CAAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | CACGGGAGCAGCACATCTTTGAGGACATCCCGCACACCTTCCTCCTaGAAGCGCAGGTTTTCTGCTCTTACCACAGGGGAATTGATCAGA | + |
Preference number: 6 (lower is better) Translates to: HGSSTSLRTSRTPSS*KRRFSALTTGELIR Trigger: TCTGATCAATTCCCCTGTGGTAAGAGCAGAAAACCTGCGCTTCAAGGAGGAAGGTGTGCGGGATGTCCTCAAAGATGTGCTGCTCCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | CTGCAATCCCCATTTTGGCCACATCCTCCGGGCCTTTaGTGCCCAGTGTCTTATCGATTTCGTACTCCACAG | + |
Preference number: 6 (lower is better) Translates to: LQSPFWPHPPGL*CPVSYRFRTPQ Trigger: CTGTGGAGTACGAAATCGATAAGACACTGGGCATCAAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | TCTCATCACGATTGCTCGGCACTGCTTGTTGTACTCTaGAATCCCCATTTTGGCCACATCCTCCGGGCCTTT | + |
Preference number: 6 (lower is better) Translates to: SHHDCSALLVVL*NPHFGHILRAF Trigger: AAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CAGCACCAAAGTAAGGAGCCTGGTGCACAACGCCTGTaGCTTCTTCATCCTTCACATAGTGGTCGACAAGCA | + |
Preference number: 6 (lower is better) Translates to: QHQSKEPGAQRL*LLHPSHSGRQA Trigger: TGCTTGTCGACCACTATGTGAAGGATGAAGAAGGCACAGGCGTTGTGCACCAGGCTCCTTACTTTGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | TGGTCAAAGGTGTACATGAGGCGAATGTCTTCCTCATaGAGTTCGTGGCCTTCCACAACAATGCTCCCGCTC | + |
Preference number: 6 (lower is better) Translates to: WSKVYMRRMSSS*SSWPSTTMLPL Trigger: GAGCGGGAGCATTGTTGTGGAAGGCCACGAACTGCATGAGGAAGACATTCGCCTCATGTACACCTTTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | GTGTTTGAGTCTCATTCAGGAACAGCCTTAGCCTCCTaGTCCTCAGTCCGAACACCTTGGCTGCTTCATGCA | + |
Preference number: 6 (lower is better) Translates to: VFESHSGTALAS*SSVRTPWLLHA Trigger: TGCATGAAGCAGCCAAGGTGTTCGGACTGAGGAGCAGGAGGCTAAGGCTGTTCCTGAATGAGACTCAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | AATGGTGCTTTCCCGCAGCGGGATGGGATGGTCAGGTaGTCGATGCTCTCTCTGTGGAGATCTGAGATTTTT | + |
Preference number: 6 (lower is better) Translates to: NGAFPQRDGMVR*SMLSLWRSEIF Trigger: AAAAATCTCAGATCTCCACAGAGAGAGCATCGACCACCTGACCATCCCATCCCGCTGCGGGAAAGCACCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | AAGGGCATGACCTTCACGCCTCTGTACACGAGGCCTTaGTCATACAGCTGCTTGAAGACCCACCAGACTGAT | + |
Preference number: 6 (lower is better) Translates to: KGMTFTPLYTRP*SYSCLKTHQTD Trigger: ATCAGTCTGGTGGGTCTTCAAGCAGCTGTATGACAAAGGCCTCGTGTACAGAGGCGTGAAGGTCATGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | TTGTTGTACTCTGCAATCCCCATTTTGGCCACATCCTCCGGGCCTTaGATGCCCAGTGTCTTATCGATTTCGTACTCCACAGGTAAGCCG | + |
Preference number: 6 (lower is better) Translates to: LLYSAIPILATSSGP*MPSVLSISYSTGKP Trigger: CGGCTTACCTGTGGAGTACGAAATCGATAAGACACTGGGCATCAAAGGCCCGGAGGATGTGGCCAAAATGGGGATTGCAGAGTACAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | TTTTGGCCATCACTTGCCAAGATGAGGCCATTCACAATCACATTCTaGAAAGGTGGCTGTCCAAAGAGCGCTGTGGCTAGCACCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: FWPSLAKMRPFTITF*KGGCPKSAVASTSR Trigger: CCTGCTGGTGCTAGCCACAGCGCTCTTTGGACAGCCACCTTTCAAGAATGTGATTGTGAATGGCCTCATCTTGGCAAGTGATGGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CACTCAGCGGAGTATCTCATCACGATTGCTCGGCACTaGTTGTTGTACTCTGCAATCCCCATTTTGGCCACA | + |
Preference number: 6 (lower is better) Translates to: HSAEYLITIARH*LLYSAIPILAT Trigger: TGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | TCCGTTGGAACCAGATTGCACTTCTTTCGAAGCTTCTaGATGCGATTGATGACTTCCCGAGCCATGCCCTCA | + |
Preference number: 6 (lower is better) Translates to: SVGTRLHFFRSF*MRLMTSRAMPS Trigger: TGAGGGCATGGCTCGGGAAGTCATCAATCGCATCCAGAAGCTTCGAAAGAAGTGCAATCTGGTTCCAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | CACAGCGTCCTCCCACTGAGGCTCAGCAAGTCAGTTTaGTTCTGTATTTCTGTTTCACCGTGGAAGACTGAC | + |
Preference number: 6 (lower is better) Translates to: HSVLPLRLSKSV*FCISVSPWKTD Trigger: GTCAGTCTTCCACGGTGAAACAGAAATACAGAACCAAACTGACTTGCTGAGCCTCAGTGGGAGGACGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | TCAGCGGAGTATCTCATCACGATTGCTCGGCACTGCTaGTTGTACTCTGCAATCCCCATTTTGGCCACATCC | + |
Preference number: 6 (lower is better) Translates to: SAEYLITIARHC*LYSAIPILATS Trigger: GGATGTGGCCAAAATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | GGATGGTCAGGTGGTCGATGCTCTCTCTGTGGAGATCTGAGATTTTaGTTCCCGACAGTTCTTCAAGCTCTGCCACTGATCCAATGCACA | + |
Preference number: 6 (lower is better) Translates to: GWSGGRCSLCGDLRF*FPTVLQALPLIQCT Trigger: TGTGCATTGGATCAGTGGCAGAGCTTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAGAGCATCGACCACCTGACCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GATGGTCAGGTGGTCGATGCTCTCTCTGTGGAGATCTaGGATTTTTGTTCCCGACAGTTCTTCAAGCTCTGC | + |
Preference number: 6 (lower is better) Translates to: DGQVVDALSVEI*DFCSRQFFKLC Trigger: GCAGAGCTTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAGAGCATCGACCACCTGACCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GATTTTTGTTCCCGACAGTTCTTCAAGCTCTGCCACTaGTCCAATGCACACTCCTCCAAGTCTTCGCTGACC | + |
Preference number: 6 (lower is better) Translates to: DFCSRQFFKLCH*SNAHSSKSSLT Trigger: GGTCAGCGAAGACTTGGAGGAGTGTGCATTGGATCAGTGGCAGAGCTTGAAGAACTGTCGGGAACAAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171510.2 |
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CDS GCA 72 bp | AGTAGACTTCCACTCAGCGGAGTATCTCATCACGATTaGTCGGCACTGCTTGTTGTACTCTGCAATCCCCAT | + |
Preference number: 6 (lower is better) Translates to: SRLPLSGVSHHD*SALLVVLCNPH Trigger: ATGGGGATTGCAGAGTACAACAAGCAGTGCCGAGCAATCGTGATGAGATACTCCGCTGAGTGGAAGTCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CTCCAGGAGCAACACTCCACCTTGCTCGGTGCCATTTaGACAAATGTTAAGGTTCACATAAGCACAAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LQEQHSTLLGAI*TNVKVHISTSR Trigger: CCTGCTTGTGCTTATGTGAACCTTAACATTTGTGCAAATGGCACCGAGCAAGGTGGAGTGTTGCTCCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | ATCCTTGTAATTCTGGTTAGATTCGAAGTTGGAGAGTaGAGTGCCACACGCGGTGGAGAAGGGCATGACCTT | + |
Preference number: 6 (lower is better) Translates to: ILVILVRFEVGE*SATRGGEGHDL Trigger: AAGGTCATGCCCTTCTCCACCGCGTGTGGCACTCCACTCTCCAACTTCGAATCTAACCAGAATTACAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | GGTGGTCGATGCTCTCTCTGTGGAGATCTGAGATTTTaGTTCCCGACAGTTCTTCAAGCTCTGCCACTGATC | + |
Preference number: 6 (lower is better) Translates to: GGRCSLCGDLRF*FPTVLQALPLI Trigger: GATCAGTGGCAGAGCTTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCCACAGAGAGAGCATCGACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 ENSMUST00000171510.2 |
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CDS CAA 72 bp | TTGAAGCGCAGGTTTTCTGCTCTTACCACAGGGGAATaGATCAGATATAACCTGAGGGCGTCCGCACCATAC | + |
Preference number: 6 (lower is better) Translates to: LKRRFSALTTGE*IRYNLRASAPY Trigger: GTATGGTGCGGACGCCCTCAGGTTATATCTGATCAATTCCCCTGTGGTAAGAGCAGAAAACCTGCGCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | ACCCAGCGGTCGGTGATGTTAGGGCTTTCTCTGACTGTATGCTCGTaGTATAGGAACTTCACTTCTTCTTCCTTGTGGAGCCTAAAGACG | + |
Preference number: 6 (lower is better) Translates to: TQRSVMLGLSLTVCS*YRNFTSSSLWSLKT Trigger: CGTCTTTAGGCTCCACAAGGAAGAAGAAGTGAAGTTCCTATACAACGAGCATACAGTCAGAGAAAGCCCTAACATCACCGACCGCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | GATTTTTGTTCCCGACAGTTCTTCAAGCTCTGCCACTaGTCCAATGCACACTACCTCCTCCAAGTCTTCGCT | + |
Preference number: 6 (lower is better) Translates to: DFCSRQFFKLCH*SNAHYLLQVFA Trigger: AGCGAAGACTTGGAGGAGGTAGTGTGCATTGGATCAGTGGCAGAGCTTGAAGAACTGTCGGGAACAAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | CCACTCTCACCCTTTAACCTCCTCCTGTTCATTCGGACATACCAGTaGGTTAGAATATCTACAAACTTGACCAGGCGAGGTACCACAGTG | + |
Preference number: 6 (lower is better) Translates to: PLSPFNLLLFIRTYQ*VRISTNLTRRGTTV Trigger: CACTGTGGTACCTCGCCTGGTCAAGTTTGTAGATATTCTAACCAACTGGTATGTCCGAATGAACAGGAGGAGGTTAAAGGGTGAGAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS GCA 72 bp | CAGCGGTCGGTGATGTTAGGGCTTTCTCTGACTGTATaGTCGTTGTATAGGAACTTCACTTCTTCTTCCTTG | + |
Preference number: 6 (lower is better) Translates to: QRSVMLGLSLTV*SLYRNFTSSSL Trigger: CAAGGAAGAAGAAGTGAAGTTCCTATACAACGAGCATACAGTCAGAGAAAGCCCTAACATCACCGACCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | GAGGGCGTCCGCACCATACTTATCGATGATGGAAACTaGATCTGGGTAGTTCTTTTTCCGCTTGCTCATTTT | + |
Preference number: 6 (lower is better) Translates to: EGVRTILIDDGN*IWVVLFPLAHF Trigger: AAAATGAGCAAGCGGAAAAAGAACTACCCAGATCCAGTTTCCATCATCGATAAGTATGGTGCGGACGCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | TCCAAGGACCTGATATCCTCTAGAGCTTCTGGGTCTTaGTGGATGACCACAATTTCCTTCAGAGGATACTTT | + |
Preference number: 6 (lower is better) Translates to: SKDLISSRASGS*WMTTISFRGYF Trigger: AAAGTATCCTCTGAAGGAAATTGTGGTCATCCACCAAGACCCAGAAGCTCTAGAGGATATCAGGTCCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | GTATGCTCGTTGTATAGGAACTTCACTTCTTCTTCCTaGTGGAGCCTAAAGACGTTCTGGATGAAGAAGCGG | + |
Preference number: 6 (lower is better) Translates to: VCSLYRNFTSSS*WSLKTFWMKKR Trigger: CCGCTTCTTCATCCAGAACGTCTTTAGGCTCCACAAGGAAGAAGAAGTGAAGTTCCTATACAACGAGCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | CCCTTTAACCTCCTCCTGTTCATTCGGACATACCAGTaGGTTAGAATATCTACAAACTTGACCAGGCGAGGT | + |
Preference number: 6 (lower is better) Translates to: PFNLLLFIRTYQ*VRISTNLTRRG Trigger: ACCTCGCCTGGTCAAGTTTGTAGATATTCTAACCAACTGGTATGTCCGAATGAACAGGAGGAGGTTAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | CGCATAGTGCAAGGTTACTGGGTAGAGTCCAAGGAGTaGTTGTCCAAGCAACTAAGGATGTATTTTCATCTT | + |
Preference number: 6 (lower is better) Translates to: RIVQGYWVESKE*LSKQLRMYFHL Trigger: AAGATGAAAATACATCCTTAGTTGCTTGGACAACCACTCCTTGGACTCTACCCAGTAACCTTGCACTATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | GATGGAAACTGGATCTGGGTAGTTCTTTTTCCGCTTGCTCATTTTTaGGCCATCACTTGCCAAGATGAGGCCATTCACAATCACATTCTT | + |
Preference number: 6 (lower is better) Translates to: DGNWIWVVLFPLAHF*AITCQDEAIHNHIL Trigger: AAGAATGTGATTGTGAATGGCCTCATCTTGGCAAGTGATGGCCAAAAAATGAGCAAGCGGAAAAAGAACTACCCAGATCCAGTTTCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | TCTGATGTTGGAACTGGATATGGCTTCAAGGGAGCTTaGATTGTGGCAAATATGAAGTCAGTGTGGCTTTCA | + |
Preference number: 6 (lower is better) Translates to: SDVGTGYGFKGA*IVANMKSVWLS Trigger: TGAAAGCCACACTGACTTCATATTTGCCACAATCAAAGCTCCCTTGAAGCCATATCCAGTTCCAACATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | AACTTTGGCCTGAGTTTTGACTGTTTGAGGCATTCCTaGAAACAGTTATGTTTGGACCAGAACTCCAAGATT | + |
Preference number: 6 (lower is better) Translates to: NFGLSFDCLRHS*KQLCLDQNSKI Trigger: AATCTTGGAGTTCTGGTCCAAACATAACTGTTTCCAGGAATGCCTCAAACAGTCAAAACTCAGGCCAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 ENSMUST00000172254.3 |
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CDS TCA 72 bp | AGTTTGGTTCTGTATTTCTGTTTCACCGTGGAAGACTaGCAGCTTTGCATTTTTAACACCAAATACGCTGGT | + |
Preference number: 6 (lower is better) Translates to: SLVLYFCFTVED*QLCIFNTKYAG Trigger: ACCAGCGTATTTGGTGTTAAAAATGCAAAGCTGTCAGTCTTCCACGGTGAAACAGAAATACAGAACCAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 90 bp | AGGATATTATCTGATGTTGGAACTGGATATGGCTTCAAGGGAGCTTaGATTGTGGCAAATATGAAGTCAGTGTGGCTTTCAATGACATTA | + |
Preference number: 6 (lower is better) Translates to: RILSDVGTGYGFKGA*IVANMKSVWLSMTL Trigger: TAATGTCATTGAAAGCCACACTGACTTCATATTTGCCACAATCAAAGCTCCCTTGAAGCCATATCCAGTTCCAACATCAGATAATATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS TCA 72 bp | ATTTCCAGCTCGGACCCCTTTAACTGTGTTTGCTCTTaGATAAGGATATTATCTGATGTTGGAACTGGATAT | + |
Preference number: 6 (lower is better) Translates to: ISSSDPFNCVCS*IRILSDVGTGY Trigger: ATATCCAGTTCCAACATCAGATAATATCCTTATTCAAGAGCAAACACAGTTAAAGGGGTCCGAGCTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CCA 72 bp | AAGGGAGCTTTGATTGTGGCAAATATGAAGTCAGTGTaGCTTTCAATGACATTATTCAAGTATCTTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: KGALIVANMKSV*LSMTLFKYLPS Trigger: TGAAGGAAGATACTTGAATAATGTCATTGAAAGCCACACTGACTTCATATTTGCCACAATCAAAGCTCCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |
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CDS CAA 72 bp | CAGATTTTGCATTATAGTAAACTGTTATTTCATCCGTaGGAACCAGATTGCACTTCTTTCGAAGCTTCTGGA | + |
Preference number: 6 (lower is better) Translates to: QILHYSKLLFHP*EPDCTSFEASG Trigger: TCCAGAAGCTTCGAAAGAAGTGCAATCTGGTTCCAACGGATGAAATAACAGTTTACTATAATGCAAAATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047363.14 ENSMUST00000164260.8 ENSMUST00000165316.8 |