Pregenerated sensors for IAPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041681Ensembl transcript IDs: ENSMUST00000041993.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGCAGGTATTTAGAATGCTTGTTTTCCCATTGTCTAGAATCAGAAATGTACTAAAGCAATTCTTAGCATaGGAATTTACACACACAGTC | + |
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Preference number: 2 (lower is better) Translates to: EQVFRMLVFPLSRIRNVLKQFLA*EFTHTV Trigger: GACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTT...TAGTACATTTCTGATTCTAGACAATGGGAAAACAAGCATTCTAAATACCTGCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| 3UTR CCA 72 bp | TTAGTTGTTAACGACTTGTCAAGTTTCATCATCCCATaGTCTTCTTTATTGTTAAACTTGAGTCATAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: LVVNDLSSFIIP*SSLLLNLSHRG Trigger: ACCTCTATGACTCAAGTTTAACAATAAAGAAGACCATGGGATGATGAAACTTGACAAGTCGTTAACAACTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | GCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTCGATCCCACGTTGGTTaGTGGGAGGACTGGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: AILSMRIYTHSHQAQAHCRSHVG*WEDWTK Trigger: CTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCG...ACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | GCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTGGTTGGTGGGAGGACTaGACCAAGGTTGTTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AILSMRIYTHSHQAQAHCGWWED*TKVVAG Trigger: TCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACC...ACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR TCA 90 bp | AACGACTTGTCAAGTTTCATCATCCCATGGTCTTCTTTATTGTTAAACTTGAGTGTGCCACAGAGAGGATaGGGAGGACAGCTGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NDLSSFIIPWSSLLLNLSVPQRG*GGQLAV Trigger: AACTGCCAGCTGTCCTCCTCATCCTCTCTGTGGCAC...ACTCAAGTTTAACAATAAAGAAGACCATGGGATGATGAAACTTGACAAGTCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | GCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTGGTGTAGCTCTCAAGTaGTTCAGTGCCACAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AILSMRIYTHSHQAQAHCGVALK*FSATER Trigger: CCTCTCTGTGGCACTGAACCACTTGAGAGCTACACC...ACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTCCCACGTTGGTTGGTaGGAGGACTGGACCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KAILSMRIYTHSHQAQAHSHVGW*EDWTKV Trigger: AACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGA...ATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | ATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTGCAGATGAGGAGGACAGCTaGCAGTTTGGAGATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILSMRIYTHSHQAQAHCADEEDS*QFGDAH Trigger: ATGTGCATCTCCAAACTGCCAGCTGTCCTCCTCATC...TGCACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR TCA 90 bp | AAAGCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTTCCGTTTGTCCATCTaGGGGTTGCTACCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAILSMRIYTHSHQAQAHFRLSI*GLLPLL Trigger: CAGAAGTGGTAGCAACCCTCAGATGGACAAACGGAA...ATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR GCA 90 bp | AAAGCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTCTCAAGTGGTTCAGTaGCACAGAGAGGATGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KAILSMRIYTHSHQAQAHSQVVQ*HREDEE Trigger: CTCCTCATCCTCTCTGTGGCACTGAACCACTTGAGA...ATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR GCA 90 bp | GAGCAGGTATTTAGAATGCTTGTTTTCCCATTGTCTAGAATCAGAAATGTACTACACACGTGGCCGTGTTaGACTTCCGTTTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EQVFRMLVFPLSRIRNVLHTWPC*TSVCPS Trigger: AGATGGACAAACGGAAGTGCAACACGGCCACGTGTG...TAGTACATTTCTGATTCTAGACAATGGGAAAACAAGCATTCTAAATACCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR GCA 90 bp | GCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTCTGCCGCATTCCTCTTaGCATATGTATTCGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AILSMRIYTHSHQAQAHCLPHSS*HMYSIP Trigger: TGGGATCGAATACATATGGCAAGAGGAATGCGGCAG...ACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | AAATGTATAGCAAGAACATGTGTGATTAGAGACATTGACTTCACTCTGAACTTGCAAGGATTCCCTATTTaGATCCCCTGCCGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: KCIARTCVIRDIDFTLNLQGFPI*IPCRIP Trigger: AGGAATGCGGCAGGGGATCCAAATAGGGAATCCTTG...CAAGTTCAGAGTGAAGTCAATGTCTCTAATCACACATGTTCTTGCTATACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CCA 90 bp | AAAGCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATGACCAAGGTTGTTGCTaGAACGAACCAAAAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KAILSMRIYTHSHQAQAHDQGCC*NEPKSL Trigger: CAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTC...ATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | TCGATCCCACGTTGGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTaGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGGCACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: SIPRWLVGGLDQGCC*NEPKSLPGVVWHTW Trigger: CCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 90 bp | TGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTTaGCAGGCGTTGTGTGGCACACGTGGCCGTGTTGCACTTCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: WEDWTKVVAGTNQKV*QALCGTRGRVALPF Trigger: AAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | TGCTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGGCACACGTaGCCGTGTTGCACTTCCGTTTGTCCATCTGAGGGTTGCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: CWNEPKSLPGVVWHT*PCCTSVCPSEGCYH Trigger: GTGGTAGCAACCCTCAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | GATCCCCTGCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTTaGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCA | + |
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Preference number: 5 (lower is better) Translates to: DPLPHSSCHMYSIPR*LVGGLDQGCCWNEP Trigger: TGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 90 bp | TATTCGATCCCACGTTGGTTGGTGGGAGGACTGGACCAAGGTTGTTaGTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGGCACACG | + |
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Preference number: 5 (lower is better) Translates to: YSIPRWLVGGLDQGC*WNEPKSLPGVVWHT Trigger: CGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | CAAGGTTGTTGCTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTaGCACACGTGGCCGTGTTGCACTTCCGTTTGTCCATCTGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QGCCWNEPKSLPGVV*HTWPCCTSVCPSEG Trigger: ACCCTCAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | CCTCTTGCCATATGTATTCGATCCCACGTTGGTTGGTGGGAGGACTaGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTTGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLAICIRSHVGWWED*TKVVAGTNQKVCQA Trigger: CGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | CCCTGCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTTGGTTaGTGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: PCRIPLAICIRSHVG*WEDWTKVVAGTNQK Trigger: TTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 90 bp | AGAAATCCAAGGATTCCCTATTTGGATCCCCTGCCGCATTCCTCTTaGCATATGTATTCGATCCCACGTTGGTTGGTGGGAGGACTGGAC | + |
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Preference number: 5 (lower is better) Translates to: RNPRIPYLDPLPHSS*HMYSIPRWLVGGLD Trigger: GTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATCCAAATAGGGAATCCTTGGATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 90 bp | TGCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTTGGTTGGTaGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: CRIPLAICIRSHVGW*EDWTKVVAGTNQKV Trigger: AACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CAA 90 bp | AAAGCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTCGATCCCACGTTGGTaGGTGGGAGGACTGGACCAA | + |
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Preference number: 5 (lower is better) Translates to: KAILSMRIYTHSHQAQAHSIPRW*VGGLDQ Trigger: TTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGA...ATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CAA 90 bp | GCAATTCTTAGCATGAGAATTTACACACACAGTCATCAAGCACAAGCACATTGTAGGACTGGACCAAGGTaGTTGCTGGAACGAACCAAA | + |
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Preference number: 5 (lower is better) Translates to: AILSMRIYTHSHQAQAHCRTGPR*LLERTK Trigger: TTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCT...ACAATGTGCTTGTGCTTGATGACTGTGTGTGTAAATTCTCATGCTAAGAATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CAA 90 bp | AACGACTTGTCAAGTTTCATCATCCCATGGTCTTCTTTATTGTTAAACTTGAGTCCTGCCGCATTCCTCTaGCCATATGTATTCGATCCC | + |
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Preference number: 5 (lower is better) Translates to: NDLSSFIIPWSSLLLNLSPAAFL*PYVFDP Trigger: GGGATCGAATACATATGGCAAGAGGAATGCGGCAGG...ACTCAAGTTTAACAATAAAGAAGACCATGGGATGATGAAACTTGACAAGTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTATTTAGAATGCTTGTTTTCCCATTGTCTAGAATCAGAAATGTACTAAACGAACCAAAAAGTTaGCCAGGCGTTGTGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: EQVFRMLVFPLSRIRNVLNEPKS*PGVVWH Trigger: GTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTT...TAGTACATTTCTGATTCTAGACAATGGGAAAACAAGCATTCTAAATACCTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 72 bp | AGTTTGCCAGGCGTTGTGTGGCACACGTGGCCGTGTTaGACTTCCGTTTGTCCATCTGAGGGTTGCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: SLPGVVWHTWPC*TSVCPSEGCYH Trigger: GTGGTAGCAACCCTCAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | GTGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTaGCCAGGCGTTGTGTGGCACACGTGGCCGTGTTGCACTTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: VGGLDQGCCWNEPKS*PGVVWHTWPCCTSV Trigger: AACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | GGATCCCCTGCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTaGGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACC | + |
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Preference number: 6 (lower is better) Translates to: GSPAAFLLPYVFDPT*VGGRTGPRLLLERT Trigger: GGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS TCA 72 bp | GCACACGTGGCCGTGTTGCACTTCCGTTTGTCCATCTaGGGGTTGCTACCACTTCTGACAGGTGTAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AHVAVLHFRLSI*GLLPLLTGVAL Trigger: GAGAGCTACACCTGTCAGAAGTGGTAGCAACCCTCAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 72 bp | CTGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTaGCCAGGCGTTGTGTGGCACACGTGGCCGTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LDQGCCWNEPKS*PGVVWHTWPCC Trigger: GCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 72 bp | TGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTTaGCAGGCGTTGTGTGGCACACGTGGCCGTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: WTKVVAGTNQKV*QALCGTRGRVA Trigger: TGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | GGGTTGCTACCACTTCTGACAGGTGTAGCTCTCAAGTaGTTCAGTGCCACAGAGAGGATGAGGAGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLLPLLTGVALK*FSATERMRRTA Trigger: AGCTGTCCTCCTCATCCTCTCTGTGGCACTGAACCACTTGAGAGCTACACCTGTCAGAAGTGGTAGCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | GAACCAAAAAGTTTGCCAGGCGTTGTGTGGCACACGTaGCCGTGTTGCACTTCCGTTTGTCCATCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: EPKSLPGVVWHT*PCCTSVCPSEG Trigger: ACCCTCAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | TGCTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTaGCACACGTGGCCGTGTTGCACTTCCGTTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CWNEPKSLPGVV*HTWPCCTSVCP Trigger: TGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | CGTTGGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTaGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RWLVGGLDQGCC*NEPKSLPGVVW Trigger: CCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | CCGCATTCCTCTTGCCATATGTATTCGATCCCACGTTaGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PHSSCHMYSIPR*LVGGLDQGCCW Trigger: CCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 72 bp | GCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTaGGTTGGTGGGAGGACTGGACCAAGGTTGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: AAFLLPYVFDPT*VGGRTGPRLLL Trigger: CAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | TGGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTTTGCCAGGCGTaGTGTGGCACACGTGGCCGTGTTGCACTTCCGTTTGTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: WTKVVAGTNQKVCQA*CGTRGRVALPFVHL Trigger: CAGATGGACAAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | GTATTCGATCCCACGTTGGTTGGTGGGAGGACTGGACCAAGGTTGTaGCTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: VFDPTLVGGRTGPRL*LERTKKFARRCVAH Trigger: GTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | CCCCTGCCGCATTCCTCTTGCCATATGTATTCGATCCCACGTTGGTaGGTGGGAGGACTGGACCAAGGTTGTTGCTGGAACGAACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: PLPHSSCHMYSIPRW*VGGLDQGCCWNEPK Trigger: TTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | CCTCTTGCCATATGTATTCGATCCCACGTTGGTTGGTaGGAGGACTGGACCAAGGTTGTTGCTGGAACGAAC | + |
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Preference number: 6 (lower is better) Translates to: PLAICIRSHVGW*EDWTKVVAGTN Trigger: GTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 72 bp | GTTGTTGCTGGAACGAACCAAAAAGTTTGCCAGGCGTaGTGTGGCACACGTGGCCGTGTTGCACTTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: VVAGTNQKVCQA*CGTRGRVALPF Trigger: AAACGGAAGTGCAACACGGCCACGTGTGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | TATGTATTCGATCCCACGTTGGTTGGTGGGAGGACTGGACCAAGGTaGTTGCTGGAACGAACCAAAAAGTTTGCCAGGCGTTGTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: YVFDPTLVGGRTGPR*LLERTKKFARRCVA Trigger: TGCCACACAACGCCTGGCAAACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS GCA 72 bp | AGGATTCCCTATTTGGATCCCCTGCCGCATTCCTCTTaGCATATGTATTCGATCCCACGTTGGTTGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RIPYLDPLPHSS*HMYSIPRWLVG Trigger: TCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATCCAAATAGGGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 72 bp | CATTCCTCTTGCCATATGTATTCGATCCCACGTTGGTaGGTGGGAGGACTGGACCAAGGTTGTTGCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: HSSCHMYSIPRW*VGGLDQGCCWN Trigger: GTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 72 bp | AAGGATTCCCTATTTGGATCCCCTGCCGCATTCCTCTaGCCATATGTATTCGATCCCACGTTGGTTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: KDSLFGSPAAFL*PYVFDPTLVGG Trigger: CCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATCCAAATAGGGAATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CAA 90 bp | AAGAAATCCAAGGATTCCCTATTTGGATCCCCTGCCGCATTCCTCTaGCCATATGTATTCGATCCCACGTTGGTTGGTGGGAGGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: KKSKDSLFGSPAAFL*PYVFDPTLVGGRTG Trigger: TCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATATGGCAAGAGGAATGCGGCAGGGGATCCAAATAGGGAATCCTTGGATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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| CDS CCA 72 bp | ATATGTATTCGATCCCACGTTGGTTGGTGGGAGGACTaGACCAAGGTTGTTGCTGGAACGAACCAAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ICIRSHVGWWED*TKVVAGTNQKV Trigger: AACTTTTTGGTTCGTTCCAGCAACAACCTTGGTCCAGTCCTCCCACCAACCAACGTGGGATCGAATACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041993.3 |
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