Pregenerated sensors for IAH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062054Ensembl transcript IDs: ENSMUST00000076813.8, ENSMUST00000221693.2, ENSMUST00000222344.2, ENSMUST00000223345.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTATGCTGCAGGTGCCTTCCCTGTGCCAGGGGAGAATGCTGCAGATaGGGACTTGGTGTGAGCACCTGTGTGGCTGCCGGTGGGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LCCRCLPCARGECCR*GLGVSTCVAAGGLC Trigger: ACACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCACAGGGAAGGCACCTGCAGCATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR TCA 90 bp | TTGCCAACTGCCAAAGGAGACAAGACAGGAGGGGCTCCTGGCAGCTaGAGGGGCGGCCATCTGCAGAGCTCTATGCTGCAGGTGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LPTAKGDKTGGAPGS*RGGHLQSSMLQVPS Trigger: GGAAGGCACCTGCAGCATAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGCCAGGAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 90 bp | TGCAGAGCTCTATGCTGCAGGTGCCTTCCCTGTGCCAGGGGAGAATaGTGCAGATGGGGACTTGGTGTGAGCACCTGTGTGGCTGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: CRALCCRCLPCARGE*CRWGLGVSTCVAAG Trigger: ACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCACAGGGAAGGCACCTGCAGCATAGAGCTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | TCACACTTTGCCAACTGCCAAAGGAGACAAGACAGGAGGGGCTCCTaGCAGCTGAAGGGGCGGCCATCTGCAGAGCTCTATGCTGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SHFANCQRRQDRRGS*QLKGRPSAELYAAG Trigger: ACCTGCAGCATAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGCCAGGAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGCAAAGTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 90 bp | GGGAGAATGCTGCAGATGGGGACTTGGTGTGAGCACCTGTGTGGCTaGCGGTGGGCTGTGTGTATCTTGGCATCTGGCAACTACAGACAG | + |
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Preference number: 1 (lower is better) Translates to: GRMLQMGTWCEHLCG*RWAVCILASGNYRQ Trigger: CTGTCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | TGCCTACCTCCCAGCAGAATATCCAGTTGGTGGGGGAAGCCCGGCTaGGGGAGAATCACACATCTTCCTGAGAGGCTAGGGAAGGGATCT | + |
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Preference number: 1 (lower is better) Translates to: CLPPSRISSWWGKPG*GRITHLPERLGKGS Trigger: AGATCCCTTCCCTAGCCTCTCAGGAAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | CTTGGTGTGAGCACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTTaGCATCTGGCAACTACAGACAGTGGGTTCTGGGTCATCAATGCC | + |
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Preference number: 1 (lower is better) Translates to: LGVSTCVAAGGLCVS*HLATTDSGFWVINA Trigger: GGCATTGATGACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | GATTCATTGCATGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTaGGGGAAGCCCGGCTGGGGGAGAATCACACATCTTCCTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: DSLHACLPPSRISSW*GKPGWGRITHLPER Trigger: CCTCTCAGGAAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 90 bp | CTGAAGGGACAAAGTGGAGGGATTTTACCATCACACTTTGCCAACTaGCAAAGGAGACAAGACAGGAGGGGCTCCTGGCAGCTGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LKGQSGGILPSHFAN*QRRQDRRGSWQLKG Trigger: CCCCTTCAGCTGCCAGGAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGCAAAGTGTGATGGTAAAATCCCTCCACTTTGTCCCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | GTCACTGGCAAACTTAGTGCTGGTCCTTTTGAAGGCCACATGGACTaGACAGCGTCTGATGCCACTGATGCCAGCATAGGGGCTGCAACA | + |
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Preference number: 1 (lower is better) Translates to: VTGKLSAGPFEGHMD*TASDATDASIGAAT Trigger: TGTTGCAGCCCCTATGCTGGCATCAGTGGCATCAGACGCTGTCCAGTCCATGTGGCCTTCAAAAGGACCAGCACTAAGTTTGCCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 90 bp | TGCCGGTGGGCTGTGTGTATCTTGGCATCTGGCAACTACAGACAGTaGGTTCTGGGTCATCAATGCCCTCCTGACTTACATACAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: CRWAVCILASGNYRQ*VLGHQCPPDLHTTR Trigger: CCTGGTTGTATGTAAGTCAGGAGGGCATTGATGACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 90 bp | ATTAATGCAGATTCCAGGACAAAATGGACAGATTCATTGCATGCCTaGCTACCTCCCAGCAGAATATCCAGTTGGTGGGGGAAGCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: INADSRTKWTDSLHA*LPPSRISSWWGKPG Trigger: GCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCCTGGAATCTGCATTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 90 bp | GCCTGTCCATTAATGCAGATTCCAGGACAAAATGGACAGATTCATTaGATGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: ACPLMQIPGQNGQIH*MPAYLPAEYPVGGG Trigger: TCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCCTGGAATCTGCATTAATGGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTGGTGGGGGAAGCCCGGCTGGGGGAGAATCACACATCTTCCTGAGAGGCACAGACAGTGGGTTCTaGGTCATCAATGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVGGGSPAGGESHIFLRGTDSGF*VINALL Trigger: CAGGAGGGCATTGATGACCCAGAACCCACTGTCTGT...GCCTCTCAGGAAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAATATCCAGTTGGTGGGGGAAGCCCGGCTGGGGGAGAATCACACATCTTGAAGGGGCGGCCATCTaGAGAGCTCTATGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRISSWWGKPGWGRITHLEGAAI*RALCCR Trigger: CCTGCAGCATAGAGCTCTGCAGATGGCCGCCCCTTC...AAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGACAGGAGGGGCTCCTGGCAGCTGAAGGGGCGGCCATCTGCAGAGCTCTAGACTCGATTCTCACTTaGCTGAAAATGGGACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TRQEGLLAAEGAAICRALDSILT*LKMGQV Trigger: GACCTGTCCCATTTTCAGTCAAGTGAGAATCGAGTC...TAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGCCAGGAGCCCCTCCTGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCAACAATGGCACAACAATGCAACAATGGCAGGAGTGCACCGTGGGGAGGTGTGCCAGGGGAGAATaGTGCAGATGGGGACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GCNNGTTMQQWQECTVGRCARGE*CRWGLG Trigger: ACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCACA...CCTCCCCACGGTGCACTCCTGCCATTGTTGCATTGTTGTGCCATTGTTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGAGCACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTTGGCATCTGGCACAGCACAACATTGTGTaGAAGCGTTGCAGCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: GVSTCVAAGGLCVSWHLAQHNIV*KRCSIR Trigger: CCTAATGCTGCAACGCTTTCACACAATGTTGTGCTG...TGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCTCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTGGACAAAGTCCAGAGCACCTGTGTGGCTaGCGGTGGGCTGTGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: SVSQSSLSSSFKQLGQSPEHLCG*RWAVCI Trigger: GATACACACAGCCCACCGGCAGCCACACAGGTGCTC...TGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATCACACATCTTCCTGAGAGGCTAGGGAAGGGATCTGGGGTATGGCAGGAGTGCAGAGCTCTATGCTaGAGGTGCCTTCCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RITHLPERLGKGSGVWQECRALC*RCLPCA Trigger: GGCACAGGGAAGGCACCTGCAGCATAGAGCTCTGCA...CTCCTGCCATACCCCAGATCCCTTCCCTAGCCTCTCAGGAAGATGTGTGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAAAATGGACAGATTCATTGCATGCCTGCCTACCTCCCAGCAGAATATCCACAGGTGCCTTCCCTGTaGCAGGGGAGAATGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GQNGQIHCMPAYLPAEYPQVPSL*QGRMLQ Trigger: CTGCAGCATTCTCCCCTGGCACAGGGAAGGCACCTG...TGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACACACTGCTACTGAGACCTCCAGTGTCAACATGCAGCCAACAGCCACTGGACAGATTCATTGCATaGCTGCCTACCTCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RDTLLLRPPVSTCSQQPLDRFIA*LPTSQQ Trigger: CTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTC...CAGTGGCTGTTGGCTGCATGTTGACACTGGAGGTCTCAGTAGCAGTGTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGCACTACTACTCGGCTGTGCCTGTGAACATGCTCAGCCATTCTGAGGCTGGGCTGTGTGTATCTTaGCATCTGGCAACTACAGAC | + |
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Preference number: 2 (lower is better) Translates to: TRHYYSAVPVNMLSHSEAGLCVS*HLATTD Trigger: GTCTGTAGTTGCCAGATGCCAAGATACACACAGCCC...AGCCTCAGAATGGCTGAGCATGTTCACAGGCACAGCCGAGTAGTAGTGCCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCACAGTACACCTTTCCAGTCAAGTGTGTAAGCATGAGAGCTGTCGTGCTCTGTGTGGCTGCCGGTaGGCTGTGTGTATCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KSTVHLSSQVCKHESCRALCGCR*AVCILA Trigger: TGCCAAGATACACACAGCCCACCGGCAGCCACACAG...AGCACGACAGCTCTCATGCTTACACACTTGACTGGAAAGGTGTACTGTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CAA 90 bp | TGCCTGTCCATTAATGCAGATTCCAGGACAAAATGGACAGATTCATaGCATGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSINADSRTKWTDS*HACLPPSRISSWWG Trigger: CCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCCTGGAATCTGCATTAATGGACAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTTGGCATCTGGCAACTACAGAGCAAAATTGCAGCTCTaGAGTAGCAATGAAATACTT | + |
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Preference number: 2 (lower is better) Translates to: HLCGCRWAVCILASGNYRAKLQL*SSNEIL Trigger: AAGTATTTCATTGCTACTTCAGAGCTGCAATTTTGC...TCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTGGACAAAGTCCACTTTACCATCACACTTTaGCAACTGCCAAAGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: VCPSQACPPVSSSLDKVHFTITL*QLPKET Trigger: TGTCTCCTTTGGCAGTTGGCAAAGTGTGATGGTAAA...GTGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAAAATGGACAGATTCATTGCATGCCTGCCTACCTCCCAGCAGAATATCCAGTTCTGGGTCATCAATaGCCTCCTGACTTACATACA | + |
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Preference number: 2 (lower is better) Translates to: GQNGQIHCMPAYLPAEYPVLGHQ*PPDLHT Trigger: TGTATGTAAGTCAGGAGGGCATTGATGACCCAGAAC...TGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTGGACAAAGTCCACAATGAAATACTTTTATaGTTGGAGGTCAGCACAACA | + |
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Preference number: 2 (lower is better) Translates to: VCPSQACPPVSSSLDKVHNEILL*LEVSTT Trigger: TGTTGTGCTGACCTCCAACCATAAAAGTATTTCATT...GTGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 72 bp | GCAGCTGAAGGGGCGGCCATCTGCAGAGCTCTATGCTaGAGGTGCCTTCCCTGTGCCAGGGGAGAATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: AAEGAAICRALC*RCLPCARGECC Trigger: GCAGCATTCTCCCCTGGCACAGGGAAGGCACCTGCAGCATAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 72 bp | CTGGCAGCTGAAGGGGCGGCCATCTGCAGAGCTCTATaGTGCAGGTGCCTTCCCTGTGCCAGGGGAGAATGC | + |
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Preference number: 3 (lower is better) Translates to: LAAEGAAICRAL*CRCLPCARGEC Trigger: GCATTCTCCCCTGGCACAGGGAAGGCACCTGCAGCATAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | TCCCTGTGCCAGGGGAGAATGCTGCAGATGGGGACTTaGTGTGAGCACCTGTGTGGCTGCCGGTGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SLCQGRMLQMGT*CEHLCGCRWAV Trigger: CACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCACAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | AGGTGCCTTCCCTGTGCCAGGGGAGAATGCTGCAGATaGGGACTTGGTGTGAGCACCTGTGTGGCTGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: RCLPCARGECCR*GLGVSTCVAAG Trigger: ACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCACAGGGAAGGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR TCA 72 bp | GTGCCAGGGGAGAATGCTGCAGATGGGGACTTGGTGTaGGCACCTGTGTGGCTGCCGGTGGGCTGTGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: VPGENAADGDLV*APVWLPVGCVY Trigger: ATACACACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCATCTGCAGCATTCTCCCCTGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | GCCAACTGCCAAAGGAGACAAGACAGGAGGGGCTCCTaGCAGCTGAAGGGGCGGCCATCTGCAGAGCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: ANCQRRQDRRGS*QLKGRPSAELY Trigger: ATAGAGCTCTGCAGATGGCCGCCCCTTCAGCTGCCAGGAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | CCCAGCAGAATATCCAGTTGGTGGGGGAAGCCCGGCTaGGGGAGAATCACACATCTTCCTGAGAGGCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: PSRISSWWGKPG*GRITHLPERLG Trigger: CCCTAGCCTCTCAGGAAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTGGGGGAAGCCCGGCTGGGGGCAGCATTAGGAAGGTaGAGAAGCACTGCTCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: CLPTSQQNIQLVGEARLGAALGR*RSTALE Trigger: CTCTAGAGCAGTGCTTCTCAACCTTCCTAATGCTGC...CCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | AGCACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTTaGCATCTGGCAACTACAGACAGTGGGTTCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: STCVAAGGLCVS*HLATTDSGFWV Trigger: GACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | CATGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTaGGGGAAGCCCGGCTGGGGGAGAATCACACATCTT | + |
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Preference number: 3 (lower is better) Translates to: HACLPPSRISSW*GKPGWGRITHL Trigger: AAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | TTGCATGCCTGCCTACCTCCCAGCAGAATATCCAGTTaGTGGGGGAAGCCCGGCTGGGGGAGAATCACACAT | + |
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Preference number: 3 (lower is better) Translates to: LHACLPPSRISS*WGKPGWGRITH Trigger: ATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | ATGGCACAACAATGCAACAATGGCAGGAGTGCACCGTaGGGAGGAACAGCCAAGGAGCAGCCAGAGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: MAQQCNNGRSAP*GGTAKEQPEAP Trigger: AGGAGCCTCTGGCTGCTCCTTGGCTGTTCCTCCCCACGGTGCACTCCTGCCATTGTTGCATTGTTGTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTTGGTGGGGGAAGCCCGGCTGGGGGAGAATCACACATCTTCCTGAGAGGCCCAGTTTCAAGCAGCTaGGACAAAGTCCACAGTACA | + |
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Preference number: 3 (lower is better) Translates to: PVGGGSPAGGESHIFLRGPVSSS*DKVHST Trigger: TGTACTGTGGACTTTGTCCAAGCTGCTTGAAACTGG...GCCTCTCAGGAAGATGTGTGATTCTCCCCCAGCCGGGCTTCCCCCACCAACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | ATGGGGACTTGGTGTGAGCACCTGTGTGGCTGCCGGTaGGCTGTGTGTATCTTGGCATCTGGCAACTACAGA | + |
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Preference number: 3 (lower is better) Translates to: MGTWCEHLCGCR*AVCILASGNYR Trigger: TCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCTCACACCAAGTCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 72 bp | CAAAGTGGAGGGATTTTACCATCACACTTTGCCAACTaGCAAAGGAGACAAGACAGGAGGGGCTCCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QSGGILPSHFAN*QRRQDRRGSWQ Trigger: CTGCCAGGAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGCAAAGTGTGATGGTAAAATCCCTCCACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | AAACTTAGTGCTGGTCCTTTTGAAGGCCACATGGACTaGACAGCGTCTGATGCCACTGATGCCAGCATAGGG | + |
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Preference number: 3 (lower is better) Translates to: KLSAGPFEGHMD*TASDATDASIG Trigger: CCCTATGCTGGCATCAGTGGCATCAGACGCTGTCCAGTCCATGTGGCCTTCAAAAGGACCAGCACTAAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 72 bp | GAAGGGACAAAGTGGAGGGATTTTACCATCACACTTTaGCAACTGCCAAAGGAGACAAGACAGGAGGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: EGTKWRDFTITL*QLPKETRQEGL Trigger: GAGCCCCTCCTGTCTTGTCTCCTTTGGCAGTTGGCAAAGTGTGATGGTAAAATCCCTCCACTTTGTCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR GCA 72 bp | GATTCCAGGACAAAATGGACAGATTCATTGCATGCCTaGCTACCTCCCAGCAGAATATCCAGTTGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: DSRTKWTDSLHA*LPPSRISSWWG Trigger: CCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCCTGGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
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| 3UTR CCA 72 bp | GTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTaGACAAAGTCCACAGTACACCTTTCCAGTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPVKPVLQFQAA*TKSTVHLSSQV Trigger: CACTTGACTGGAAAGGTGTACTGTGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CCA 72 bp | GCTGTGTGTATCTTGGCATCTGGCAACTACAGACAGTaGGTTCTGGGTCATCAATGCCCTCCTGACTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: AVCILASGNYRQ*VLGHQCPPDLH Trigger: ATGTAAGTCAGGAGGGCATTGATGACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATACACACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTGGACAAAGTCCAAGACTCGATTCTCACTaGACTGAAAATGGGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSQSSLSSSFKQLGQSPRLDSH*TENGTG Trigger: ACCTGTCCCATTTTCAGTCAAGTGAGAATCGAGTCT...TGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CCA 72 bp | GTATCTTGGCATCTGGCAACTACAGACAGTGGGTTCTaGGTCATCAATGCCCTCCTGACTTACATACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VSWHLATTDSGF*VINALLTYIQP Trigger: TGGTTGTATGTAAGTCAGGAGGGCATTGATGACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CCA 72 bp | TGTAAGCATGAGAGCTGTCGTGCTGAAGGGACAAAGTaGAGGGATTTTACCATCACACTTTGCCAACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CKHESCRAEGTK*RDFTITLCQLP Trigger: TGGCAGTTGGCAAAGTGTGATGGTAAAATCCCTCCACTTTGTCCCTTCAGCACGACAGCTCTCATGCTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR GCA 72 bp | TTAATGCAGATTCCAGGACAAAATGGACAGATTCATTaGATGCCTGCCTACCTCCCAGCAGAATATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LMQIPGQNGQIH*MPAYLPAEYPV Trigger: AACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCCTGGAATCTGCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR TCA 72 bp | AATACTTTTATGGTTGGAGGTCAGCACAACATTGTGTaGAAGCGTTGCAGCATTAGGAAGGTTGAGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NTFMVGGQHNIV*KRCSIRKVEKH Trigger: GTGCTTCTCAACCTTCCTAATGCTGCAACGCTTTCACACAATGTTGTGCTGACCTCCAACCATAAAAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CCA 72 bp | TGCAGCTCTGAAGTAGCAATGAAATACTTTTATGGTTaGAGGTCAGCACAACATTGTGTGAAAGCGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSEVAMKYFYG*RSAQHCVKALQ Trigger: CTGCAACGCTTTCACACAATGTTGTGCTGACCTCCAACCATAAAAGTATTTCATTGCTACTTCAGAGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR TCA 72 bp | ACACTGCGATTCATAAGAGTAGCAAAATTGCAGCTCTaGAGTAGCAATGAAATACTTTTATGGTTGGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLRFIRVAKLQL*SSNEILLWLEV Trigger: GACCTCCAACCATAAAAGTATTTCATTGCTACTTCAGAGCTGCAATTTTGCTACTCTTATGAATCGCAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR TCA 72 bp | GTGGCATTGATGATACCTGCCTCAGTCAATAAATACTaGATATCAAAGCAGTGGATTGCGTATATAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: VALMIPASVNKY*ISKQWIAYITF Trigger: AAATGTTATATACGCAATCCACTGCTTTGATATTCAGTATTTATTGACTGAGGCAGGTATCATCAATGCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| 3UTR CAA 72 bp | GAGCACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTaGGCATCTGGCAACTACAGACAGTGGGTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EHLCGCRWAVCI*ASGNYRQWVLG Trigger: ACCCAGAACCCACTGTCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAACAATGGCACAACAATGCAACAATGGCAGGAGTGCACCGTGGGGAGGGAACATCACACTTTCTaGCTAGTCTGTCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCNNGTTMQQWQECTVGREHHTF*LVCQPA Trigger: TGCTGGCTGACAGACTAGTCAGAAAGTGTGATGTTC...CCTCCCCACGGTGCACTCCTGCCATTGTTGCATTGTTGTGCCATTGTTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTTGGACAAAGTCCAGAGCCCCATCCACCCTaGTGGAAAGAAAACTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSQSSLSSSFKQLGQSPEPHPP*WKENCV Trigger: CACGCAGTTTTCTTTCCAGCAGGGTGGATGGGGCTC...TGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR TCA 90 bp | CACCTGTGTGGCTGCCGGTGGGCTGTGTGTATCTTGGCATCTGGCAACTACAGATCTGGTGTTATAACCTaGAAATCCACGATTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLCGCRWAVCILASGNYRSGVIT*KSTIQN Trigger: GTTCTGAATCGTGGATTTTCAGGTTATAACACCAGA...TCTGTAGTTGCCAGATGCCAAGATACACACAGCCCACCGGCAGCCACACAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CAA 72 bp | GAGAAGCACTGCTCTAGAGAAAGACTCGATTCTCACTaGACTGAAAATGGGACAGGTCCCTCCATCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKHCSRERLDSH*TENGTGPSIEW Trigger: CCACTCGATGGAGGGACCTGTCCCATTTTCAGTCAAGTGAGAATCGAGTCTTTCTCTAGAGCAGTGCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| 3UTR CAA 72 bp | TGTCCCAGTCAAGCCTGTCCTCCAGTTTCAAGCAGCTaGGACAAAGTCCACAGTACACCTTTCCAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPSQACPPVSSS*DKVHSTPFQSS Trigger: ACTTGACTGGAAAGGTGTACTGTGGACTTTGTCCAAGCTGCTTGAAACTGGAGGACAGGCTTGACTGGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAGTACACCTTTCCAGTCAAGTGTGTAAGCATGAGAGCTGTCGTGCTTGCTGGAAAGAAAACTaGGTGATGGAGTCCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSTVHLSSQVCKHESCRACWKEN*VMESPK Trigger: CTTCGGGGACTCCATCACGCAGTTTTCTTTCCAGCA...AGCACGACAGCTCTCATGCTTACACACTTGACTGGAAAGGTGTACTGTGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGGCACTACTACTCGGCTGTGCCTGTGAACATGCTCAGCCATTCTGAGGCTTTTCCTGATAAGTCTTaGGAGGATAATCTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRHYYSAVPVNMLSHSEAFPDKS*EDNLGP Trigger: TGGGCCAAGATTATCCTCCCAAGACTTATCAGGAAA...AGCCTCAGAATGGCTGAGCATGTTCACAGGCACAGCCGAGTAGTAGTGCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAAGCACTGCTCTAGAGAAAGACTCGATTCTCACTTGACTGAAAATGGGCCCCATCCACCCTGCTaGAAAGAAAACTGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VEKHCSRERLDSHLTENGPHPPC*KENCVM Trigger: CATCACGCAGTTTTCTTTCCAGCAGGGTGGATGGGG...CCCATTTTCAGTCAAGTGAGAATCGAGTCTTTCTCTAGAGCAGTGCTTCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGCATGTACAGAATTAATAAGATGCTCAGGGCATATTCTATAGCTGTGGCAGATTGTAACGGCCACTaGGTTTTCCATCCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGMYRINKMLRAYSIAVADCNGH*VFHPRP Trigger: GGGCCTGGGATGGAAAACCCAGTGGCCGTTACAATC...TGCCACAGCTATAGAATATGCCCTGAGCATCTTATTAATTCTGTACATGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGCATGTACAGAATTAATAAGATGCTCAGGGCATATTCTATAGCTGTGGCACCCCATCCACCCTGCTaGAAAGAAAACTGCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FGMYRINKMLRAYSIAVAPHPPC*KENCVM Trigger: CATCACGCAGTTTTCTTTCCAGCAGGGTGGATGGGG...TGCCACAGCTATAGAATATGCCCTGAGCATCTTATTAATTCTGTACATGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| 3UTR CAA 72 bp | ACAACATTGTGTGAAAGCGTTGCAGCATTAGGAAGGTaGAGAAGCACTGCTCTAGAGAAAGACTCGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTLCESVAALGR*RSTALEKDSIL Trigger: GAGAATCGAGTCTTTCTCTAGAGCAGTGCTTCTCAACCTTCCTAATGCTGCAACGCTTTCACACAATGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR GCA 90 bp | GATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTGGCTGCTGGAAAGAAAACTaGGTGATGGAGTCCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVCELLIKLRTCSQNVCGCWKEN*VMESPK Trigger: CTTCGGGGACTCCATCACGCAGTTTTCTTTCCAGCA...GCCACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR GCA 90 bp | CAATCTCTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGAGCCCCATCCACCCTaGTGGAAAGAAAACTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLDVCELLIKLRTCSQNEPHPP*WKENCV Trigger: CACGCAGTTTTCTTTCCAGCAGGGTGGATGGGGCTC...ATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAGAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR GCA 90 bp | CTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTTCCTGGCTGTCCTTCTaGATCAGGGTCCACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDVCELLIKLRTCSQNVCSWLSF*IRVHRS Trigger: TGACCTGTGGACCCTGATGCAGAAGGACAGCCAGGA...ACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR TCA 90 bp | GATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTGGCTGGGGTTCTCATCTTTaGGTGAAGAGTCATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DVCELLIKLRTCSQNVCGWGSHL*VKSHWH Trigger: GTGCCAATGACTCTTCACTCAAAGATGAGAACCCCA...GCCACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR GCA 90 bp | CAATCTCTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATTCCAAGGGGACGTGCTaGTTGGGGTTCTCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLDVCELLIKLRTCSQNSKGTC*LGFSSL Trigger: CAAAGATGAGAACCCCAAGCAGCACGTCCCCTTGGA...ATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAGAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR GCA 90 bp | CTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTACTCAGCTCGGGCTTTaGTTCCTCCACATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDVCELLIKLRTCSQNVCTQLGL*FLHILP Trigger: TGGAAGGATGTGGAGGAAGCAAAGCCCGAGCTGAGT...ACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR TCA 90 bp | CTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTGAACATCACACTTTCTaGCTAGTCTGTCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDVCELLIKLRTCSQNVCEHHTF*LVCQPA Trigger: TGCTGGCTGACAGACTAGTCAGAAAGTGTGATGTTC...ACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR GCA 90 bp | CTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTTCAGGCGGTTTAATTTaGAACCCTTCAGGACGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LDVCELLIKLRTCSQNVCSGGLI*NPSGRT Trigger: AGTGCGTCCTGAAGGGTTGCAAATTAAACCGCCTGA...ACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGCATGTACAGAATTAATAAGATGCTCAGGGCATATTCTATAGCTGTGGCATTTCCTGATAAGTCTTaGGAGGATAATCTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGMYRINKMLRAYSIAVAFPDKS*EDNLGP Trigger: TGGGCCAAGATTATCCTCCCAAGACTTATCAGGAAA...TGCCACAGCTATAGAATATGCCCTGAGCATCTTATTAATTCTGTACATGCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR TCA 90 bp | CTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTTCTGGTGTTATAACCTaGAAATCCACGATTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LDVCELLIKLRTCSQNVCSGVIT*KSTIQN Trigger: GTTCTGAATCGTGGATTTTCAGGTTATAACACCAGA...ACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS CCA 90 bp | TATAACCGGCTCGCGGAGCACGGTGGGGTGGGGGAGAACCGCGCCTaGACTGCTCCGACACGCACGCGGATGCAGCCGAGGGTGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YNRLAEHGGVGENRA*TAPTRTRMQPRVRR Trigger: CCGCCGCACCCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCCAGGCGCGGTTCTCCCCCACCCCACCGTGCTCCGCGAGCCGGTTATA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS GCA 90 bp | GGGTGGGGGAGAACCGCGCCTGGACTGCTCCGACACGCACGCGGATaGAGCCGAGGGTGCGGCGGGTACCTGCGTGATGGAGTCCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWGRTAPGLLRHARG*SRGCGGYLRDGVPE Trigger: TTCGGGGACTCCATCACGCAGGTACCCGCCGCACCCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCCAGGCGCGGTTCTCCCCCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS GCA 90 bp | ACCGCGCCTGGACTGCTCCGACACGCACGCGGATGCAGCCGAGGGTaGGGCGGGTACCTGCGTGATGGAGTCCCCGAAGAGCAACACGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAPGLLRHARGCSRG*GGYLRDGVPEEQHA Trigger: CGCGTGTTGCTCTTCGGGGACTCCATCACGCAGGTACCCGCCGCACCCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCCAGGCGCGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS CCA 90 bp | CTTCAGGACGCACTCCTTCTCCCAGGCGGCTTCGCAGAGCGGGGGTaGCGTGATAAGGATGACCCGCTCCCTGGGGACGTCCACAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LQDALLLPGGFAERG*RDKDDPLPGDVHRP Trigger: AGGTCTGTGGACGTCCCCAGGGAGCGGGTCATCCTTATCACGCCACCCCCGCTCTGCGAAGCCGCCTGGGAGAAGGAGTGCGTCCTGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 ENSMUST00000222344.2 ENSMUST00000223345.2 |
||
| CDS CCA 90 bp | AACGGCCACTGGGTTTTCCATCCCAGGCCCTTTCCTGATAAGTCTTaGGAGGATAATCTTGGCCCATCTGGTGTTATAACCGGCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: NGHWVFHPRPFPDKS*EDNLGPSGVITGSR Trigger: CCGCGAGCCGGTTATAACACCAGATGGGCCAAGATTATCCTCCCAAGACTTATCAGGAAAGGGCCTGGGATGGAAAACCCAGTGGCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTGCATGCCTGCCTACCTCCCAGCAGAATATCCAGTTGGTGGGGGAAGCCTTGGGGTTCTCATCTTaGAGTGAAGAGTCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FIACLPTSQQNIQLVGEALGFSS*SEESLA Trigger: TGCCAATGACTCTTCACTCAAAGATGAGAACCCCAA...GGCTTCCCCCACCAACTGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR CAA 90 bp | GGACAAAATGGACAGATTCATTGCATGCCTGCCTACCTCCCAGCAGAATATCCAAAGGGGACGTGCTGCTaGGGGTTCTCATCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GQNGQIHCMPAYLPAEYPKGTCC*GFSSLS Trigger: ACTCAAAGATGAGAACCCCAAGCAGCACGTCCCCTT...TGGATATTCTGCTGGGAGGTAGGCAGGCATGCAATGAATCTGTCCATTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223345.2 |
||
| CDS-3UTR CAA 90 bp | GATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTGGCGACTCAGCTCGGGCTTaGCTTCCTCCACATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVCELLIKLRTCSQNVCGDSARA*LPPHPS Trigger: GGAAGGATGTGGAGGAAGCAAAGCCCGAGCTGAGTC...GCCACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CAA 90 bp | GATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATGTTTGTGGCAAGGGGACGTGCTGCTaGGGGTTCTCATCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DVCELLIKLRTCSQNVCGKGTCC*GFSSLS Trigger: ACTCAAAGATGAGAACCCCAAGCAGCACGTCCCCTT...GCCACAAACATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGCATGTACAGAATTAATAAGATGCTCAGGGCATATTCTATAGCTGTGGCAGAAACTCATTTCCCATaGGTGATAAATGCAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FGMYRINKMLRAYSIAVAETHFP*VINAGH Trigger: ATGGCCTGCATTTATCACCAATGGGAAATGAGTTTC...TGCCACAGCTATAGAATATGCCCTGAGCATCTTATTAATTCTGTACATGCCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CAA 90 bp | CAATCTCTTGATGTCTGTGAATTACTAATAAAGCTACGCACATGTTCACAGAATTTGGGGTTCTCATCTTaGAGTGAAGAGTCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSLDVCELLIKLRTCSQNLGFSS*SEESLA Trigger: TGCCAATGACTCTTCACTCAAAGATGAGAACCCCAA...ATTCTGTGAACATGTGCGTAGCTTTATTAGTAATTCACAGACATCAAGAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGCATGTACAGAATTAATAAGATGCTCAGGGCATATTCTATAGCTGTGGCACTTGTAAACACGCATTaGCATATTCACCAACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FGMYRINKMLRAYSIAVALVNTH*HIHQQL Trigger: CAGTTGTTGGTGAATATGCAAATGCGTGTTTACAAG...TGCCACAGCTATAGAATATGCCCTGAGCATCTTATTAATTCTGTACATGCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
||
| CDS GCA 72 bp | GGAGCACGGTGGGGTGGGGGAGAACCGCGCCTGGACTaGTCCGACACGCACGCGGATGCAGCCGAGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GARWGGGEPRLD*SDTHADAAEGA Trigger: CGCACCCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCCAGGCGCGGTTCTCCCCCACCCCACCGTGCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS CCA 72 bp | CTCGCGGAGCACGGTGGGGTGGGGGAGAACCGCGCCTaGACTGCTCCGACACGCACGCGGATGCAGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAEHGGVGENRA*TAPTRTRMQPR Trigger: CCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCCAGGCGCGGTTCTCCCCCACCCCACCGTGCTCCGCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS GCA 72 bp | GGACTGCTCCGACACGCACGCGGATGCAGCCGAGGGTaGGGCGGGTACCTGCGTGATGGAGTCCCCGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLLRHARGCSRG*GGYLRDGVPEE Trigger: CTCTTCGGGGACTCCATCACGCAGGTACCCGCCGCACCCTCGGCTGCATCCGCGTGCGTGTCGGAGCAGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221693.2 |
||
| CDS CCA 72 bp | GCACTCCTTCTCCCAGGCGGCTTCGCAGAGCGGGGGTaGCGTGATAAGGATGACCCGCTCCCTGGGGACGTC | + |
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Preference number: 6 (lower is better) Translates to: ALLLPGGFAERG*RDKDDPLPGDV Trigger: GACGTCCCCAGGGAGCGGGTCATCCTTATCACGCCACCCCCGCTCTGCGAAGCCGCCTGGGAGAAGGAGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 ENSMUST00000222344.2 ENSMUST00000223345.2 |
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| CDS GCA 72 bp | CACAGACCTCAGGTACTGCACCATGTCCCTCAGGTTTaGGCTGTACTCATCCAAGGGGACGTGCTGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HRPQVLHHVPQV*AVLIQGDVLLG Trigger: CCCAAGCAGCACGTCCCCTTGGATGAGTACAGCGCAAACCTGAGGGACATGGTGCAGTACCTGAGGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 ENSMUST00000222344.2 ENSMUST00000223345.2 |
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| CDS CAA 72 bp | CCACAGACCTCAGGTACTGCACCATGTCCCTCAGGTTaGCGCTGTACTCATCCAAGGGGACGTGCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PQTSGTAPCPSG*RCTHPRGRAAW Trigger: CCAAGCAGCACGTCCCCTTGGATGAGTACAGCGCAAACCTGAGGGACATGGTGCAGTACCTGAGGTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 ENSMUST00000222344.2 ENSMUST00000223345.2 |
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| CDS CAA 90 bp | CACGCATTTGCATATTCACCAACAACTGAGTTCAGGCGGTTTAATTaGCAACCCTTCAGGACGCACTCCTTCTCCCAGGCGGCTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HAFAYSPTTEFRRFN*QPFRTHSFSQAASQ Trigger: CTGCGAAGCCGCCTGGGAGAAGGAGTGCGTCCTGAAGGGTTGCAAATTAAACCGCCTGAACTCAGTTGTTGGTGAATATGCAAATGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 |
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| CDS CCA 72 bp | TGGGTTTTCCATCCCAGGCCCTTTCCTGATAAGTCTTaGGAGGATAATCTTGGCCCATCTGGTGTTATAACC | + |
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Preference number: 6 (lower is better) Translates to: WVFHPRPFPDKS*EDNLGPSGVIT Trigger: GGTTATAACACCAGATGGGCCAAGATTATCCTCCCAAGACTTATCAGGAAAGGGCCTGGGATGGAAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 ENSMUST00000222344.2 ENSMUST00000223345.2 |
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| CDS CAA 72 bp | CAGTCCCACAGTCTCGGGCTACTTGTAAACACGCATTaGCATATTCACCAACAACTGAGTTCAGGCGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: QSHSLGLLVNTH*HIHQQLSSGGL Trigger: TAAACCGCCTGAACTCAGTTGTTGGTGAATATGCAAATGCGTGTTTACAAGTAGCCCGAGACTGTGGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 |
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| CDS CAA 90 bp | CAAGGACATCAGTCCCACAGTCTCGGGCTACTTGTAAACACGCATTaGCATATTCACCAACAACTGAGTTCAGGCGGTTTAATTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QGHQSHSLGLLVNTH*HIHQQLSSGGLICN Trigger: GTTGCAAATTAAACCGCCTGAACTCAGTTGTTGGTGAATATGCAAATGCGTGTTTACAAGTAGCCCGAGACTGTGGGACTGATGTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076813.8 ENSMUST00000221693.2 |
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| CDS CAA 90 bp | TGTCCAGCAGTGGACAGAGGTTTAAGAACAGAAACTCATTTCCCATaGGTGATAAATGCAGGCCATCCGATAAATAGGATGAGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPAVDRGLRTETHFP*VINAGHPINRMRSP Trigger: AGGACTTCTCATCCTATTTATCGGATGGCCTGCATTTATCACCAATGGGAAATGAGTTTCTGTTCTTAAACCTCTGTCCACTGCTGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
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| CDS TCA 72 bp | TGGGAGGATAATCTTGGCCCATCTGGTGTTATAACCTaGAAATCCACGATTCAGAACATCACACTTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: WEDNLGPSGVIT*KSTIQNITLSD Trigger: GTCAGAAAGTGTGATGTTCTGAATCGTGGATTTTCAGGTTATAACACCAGATGGGCCAAGATTATCCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076813.8 ENSMUST00000222344.2 ENSMUST00000223345.2 |
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| CDS CAA 72 bp | GTGGACAGAGGTTTAAGAACAGAAACTCATTTCCCATaGGTGATAAATGCAGGCCATCCGATAAATAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VDRGLRTETHFP*VINAGHPINRM Trigger: CATCCTATTTATCGGATGGCCTGCATTTATCACCAATGGGAAATGAGTTTCTGTTCTTAAACCTCTGTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076813.8 |
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