Pregenerated sensors for HYKK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035878Ensembl transcript IDs: ENSMUST00000039742.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCACGCCAGAAAGATACAGAAGGGAAAGACCGCCGACATGTAGGTaGAGGGGGAAAGCTGCCCAGGAGGGCTGCCCAGCCAGGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TTPERYRRERPPTCR*RGKAAQEGCPARSR Trigger: CCTGGACCTGGCTGGGCAGCCCTCCTGGGCAGCTTTCCCCCTGCACCTACATGTCGGCGGTCTTTCCCTTCTGTATCTTTCTGGCGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCTCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LSSAGIKGVRHHCP Trigger: AGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCTCAAGCGCTGGGATTAAAGGCGTGCGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLSSAGIKGVRHH Trigger: GTGGTGGCGCACGCCTTTAATCCCAGCGCTTGAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | TGCCTCTGCCTCTCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTaGCCTGTGAGAATGGATCTGTTTTACCATTTCAGTTTTAACTCT | + |
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Preference number: 1 (lower is better) Translates to: CLCLSSAGIKGVRHH*PVRMDLFYHFSFNS Trigger: AGAGTTAAAACTGAAATGGTAAAACAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGAGAGGCAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | TTTAGAAAGCATGTGGTTAAACAAAAGAATGCAGTGAGTGGTCTATaGATGCCTACAGTCCCAGCTACTGGGTTGCATGGGCAGGATTAT | + |
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Preference number: 1 (lower is better) Translates to: FRKHVVKQKNAVSGL*MPTVPATGLHGQDY Trigger: ATAATCCTGCCCATGCAACCCAGTAGCTGGGACTGTAGGCATGCATAGACCACTCACTGCATTCTTTTGTTTAACCACATGCTTTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | AATATGAGTATCCTAAGTGTTTCACATGTGAATGATCTCATGTACTaGCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGG | + |
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Preference number: 1 (lower is better) Translates to: NMSILSVSHVNDLMY*PHVCGCGCGCVKTR Trigger: CCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTACATGAGATCATTCACATGTGAAACACTTAGGATACTCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 90 bp | AATAAAAACCTCAAATATGAGTATCCTAAGTGTTTCACATGTGAATaGTCTCATGTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: NKNLKYEYPKCFTCE*SHVLPPCVWVWVWV Trigger: CACCCACACCCACACCCACACACATGGGGGCAGTACATGAGATCATTCACATGTGAAACACTTAGGATACTCATATTTGAGGTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 90 bp | ACGGCTTGTGTTCTCATGCTAATTATGTTACCAAAAATACCTGTTTaGAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTCCCCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: TACVLMLIMLPKIPV*SVPHLGLKEACPQL Trigger: TAACTGGGGACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAGCATGAGAACACAAGCCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCGTGCAGGGGGAAAGCTaGCCAGGAGGGCTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SKDFSVGKALSEGQEETPVQGES*PGGLPS Trigger: GCTGGGCAGCCCTCCTGGGCAGCTTTCCCCCTGCAC...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCACAGAGACATGCTTACTTGGGTGGTACTTGTGTGGATTTCCTTGTTTCTGGCTGCCCAGGAGGGCTaGCCAGCCAGGTCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LHRDMLTWVVLVWISLFLAAQEG*PARSRA Trigger: TGCCCTGGACCTGGCTGGGCAGCCCTCCTGGGCAGC...CAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAAAGGCAGCAGGATGGGATTGCCACCACTGCCCTGTaGGAATGGATCTGTTTTACC | + |
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Preference number: 2 (lower is better) Translates to: GCGCGCVKTRKERQQDGIATTAL*EWICFT Trigger: GGTAAAACAGATCCATTCTCACAGGGCAGTGGTGGC...AATCCCATCCTGCTGCCTTTCCTTCCTTGTTTTTACACACCCACACCCACACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTGAGAATGGATCTGAGGAAGAGAAGATTTTaGCACAAGAGGGGCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSAGIKGVRHHCPVRMDLRKRRF*HKRGIG Trigger: TCCTATGCCCCTCTTGTGGCAAAATCTTCTCTTCCT...CAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCACAGAGACATGCTTACTTGGGTGGTACTTGTGTGGATTTCCTTGTTTCTGCCAGCGGCCAATGACTaGGCAGAGACAGAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LHRDMLTWVVLVWISLFLPAAND*AETEVG Trigger: TCCCACCTCTGTCTCTGCCCAGTCATTGGCCGCTGG...CAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CAA 90 bp | AAGGCAAGCATGACCTGCACAGAGACATGCTTACTTGGGTGGTACTaGTGTGGATTTCCTTGTTTCTGTAGTGCTGAGGTTGAACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: KASMTCTETCLLGWY*CGFPCFCSAEVEPG Trigger: CCCGGGTTCAACCTCAGCACTACAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAGGTCATGCTTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGACTACATGTGCTTCAATaGACTTGTGTCTGGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGLHVLQ*TCVWSS Trigger: AGAACTCCAGACACAAGTGCATTGAAGCACATGTAG...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGAATGAGACCCAAGTTCCAGCCCATTTTTCTGGTCCTGATTGGCCAAGTAATGATCTCATGTACTaGCCCCATGTGTGTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: IWNETQVPAHFSGPDWPSNDLMY*PHVCGC Trigger: ACACCCACACACATGGGGGCAGTACATGAGATCATT...ACTTGGCCAATCAGGACCAGAAAAATGGGCTGGAACTTGGGTCTCATTCCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAAACTTAAGCCAAGTATaGAATGCAATGATCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGNLSQV*NAMICI Trigger: AATGCAGATCATTGCATTGCATACTTGGCTTAAGTT...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAACTCAGAAATCCGCCTaGCTCTGCCTCTCAAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKTQKSA*LCLSSA Trigger: AGCGCTTGAGAGGCAGAGGCAGGCGGATTTCTGAGT...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCAGTTTTTCATGGCTGTaGCATGTCAATTTACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SKDFSVGKALSEGQEETPSFSWL*HVNLQD Trigger: ATCCTGTAAATTGACATGGCACAGCCATGAAAAACT...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGAACATGTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTGCATTATGGCCTTGCCTGGATaGCTACATGTGCTTCAATGC | + |
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Preference number: 2 (lower is better) Translates to: NKEHVGPNRMVYHYSLCIMALPG*LHVLQC Trigger: GCATTGAAGCACATGTAGGCATCCAGGCAAGGCCAT...AATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCACATGTTCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CAA 90 bp | AACGGCTTGTGTTCTCATGCTAATTATGTTACCAAAAATACCTGTTaGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTCCCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: NGLCSHANYVTKNTC*QCPTFRTKGSLSPV Trigger: AACTGGGGACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAGCATGAGAACACAAGCCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGAACATGTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTGCATTTCGATCTTCGGAGACTaGAGACAAGTCATGTATCAT | + |
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Preference number: 2 (lower is better) Translates to: NKEHVGPNRMVYHYSLCISIFGD*RQVMYH Trigger: ATGATACATGACTTGTCTTCAGTCTCCGAAGATCGA...AATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCACATGTTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR GCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAATTAAAAATAAGGTTGTaGGTGTGTGTCTTTCACTCG | + |
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Preference number: 2 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKLKIRL*VCVFHS Trigger: CGAGTGAAAGACACACACGCACAACCTTATTTTTAA...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCTCAAGCGCTGGGATTAAAGGCGTGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LSSAGIKGVRH Trigger: GTGGCGCACGCCTTTAATCCCAGCGCTTGAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | GAAAGATACAGAAGGGAAAGACCGCCGACATGTAGGTaGAGGGGGAAAGCTGCCCAGGAGGGCTGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: ERYRRERPPTCR*RGKAAQEGCPA Trigger: GGCTGGGCAGCCCTCCTGGGCAGCTTTCCCCCTGCACCTACATGTCGGCGGTCTTTCCCTTCTGTATCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCTCAAGCGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLSSAGIKGV Trigger: CACGCCTTTAATCCCAGCGCTTGAGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CCA 72 bp | AGGCGCCTTGCTGGTGTCCTGGATAATGGCCTTGCCTaGATGCCTACATGTGCTTCAATGCACTTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: RRLAGVLDNGLA*MPTCASMHLCL Trigger: CAGACACAAGTGCATTGAAGCACATGTAGGCATCCAGGCAAGGCCATTATCCAGGACACCAGCAAGGCGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CCA 72 bp | CCTAAAATCCTGATTTGTGAAAGCAGCAGGGCTCGATaGCTGACTGTGAGAAGGGCAAGCAGCGTGCCACAC | + |
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Preference number: 3 (lower is better) Translates to: PKILICESSRAR*LTVRRASSVPH Trigger: GTGTGGCACGCTGCTTGCCCTTCTCACAGTCAGCCATCGAGCCCTGCTGCTTTCACAAATCAGGATTTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGACGAGACACGGTTTCTTaGTATAGCCCTGGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGRDTVS*YSPGCP Trigger: AGGACAGCCAGGGCTATACAAAGAAACCGTGTCTCG...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | GCCTTGCTGGTGTCCTGGATAATGGCCTTGCCTGGATaGCTACATGTGCTTCAATGCACTTGTGTCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: ALLVSWIMALPG*LHVLQCTCVWS Trigger: ACTCCAGACACAAGTGCATTGAAGCACATGTAGGCATCCAGGCAAGGCCATTATCCAGGACACCAGCAAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | GTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTaGATTGGGAGGCTGAACAGGAGGATCTTGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: VGPNRMVYHYSL*IGRLNRRILGA Trigger: GGCTCCCAAGATCCTCCTGTTCAGCCTCCCAATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | CTCTCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTaGCCTGTGAGAATGGATCTGTTTTACCATTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LSSAGIKGVRHH*PVRMDLFYHFS Trigger: ACTGAAATGGTAAAACAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 72 bp | GCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTaGGAATGGATCTGTTTTACCATTTCAGTTTTAACT | + |
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Preference number: 3 (lower is better) Translates to: ALGLKACATTAL*EWICFTISVLT Trigger: AGTTAAAACTGAAATGGTAAAACAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | CATGTGGTTAAACAAAAGAATGCAGTGAGTGGTCTATaGATGCCTACAGTCCCAGCTACTGGGTTGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: HVVKQKNAVSGL*MPTVPATGLHG Trigger: CCCATGCAACCCAGTAGCTGGGACTGTAGGCATGCATAGACCACTCACTGCATTCTTTTGTTTAACCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | ATCCTAAGTGTTTCACATGTGAATGATCTCATGTACTaGCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: ILSVSHVNDLMY*PHVCGCGCGCV Trigger: TACACACCCACACCCACACCCACACACATGGGGGCAGTACATGAGATCATTCACATGTGAAACACTTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | CCTTGTTTCTGTAGTGCTGAGGTTGAACCCGGGCTTTaGATACTAGGCAAGGGTTCATCATGTAGACTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PCFCSAEVEPGL*ILGKGSSCRLS Trigger: AGAAAGTCTACATGATGAACCCTTGCCTAGTATGCAAAGCCCGGGTTCAACCTCAGCACTACAGAAACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CCA 72 bp | GCAAGCATGACCTGCACAGAGACATGCTTACTTGGGTaGTACTTGTGTGGATTTCCTTGTTTCTGTAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ASMTCTETCLLG*YLCGFPCFCSA Trigger: AGCACTACAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAGGTCATGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CCA 72 bp | CCTACATGTGCTTCAATGCACTTGTGTCTGGAGTTCTaGTTGCAGCTACTCTCCCAAACAAGTTTTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PTCASMHLCLEF*LQLLSQTSFSQ Trigger: CTGAGAAAAACTTGTTTGGGAGAGTAGCTGCAACCAGAACTCCAGACACAAGTGCATTGAAGCACATGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 72 bp | CTCAAATATGAGTATCCTAAGTGTTTCACATGTGAATaGTCTCATGTACTGCCCCCATGTGTGTGGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LKYEYPKCFTCE*SHVLPPCVWVW Trigger: CCACACCCACACACATGGGGGCAGTACATGAGATCATTCACATGTGAAACACTTAGGATACTCATATTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 72 bp | TGTATCATCATGTGTGTTTCTTGTAAAAGGCAAGCATaGCCTGCACAGAGACATGCTTACTTGGGTGGTACT | + |
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Preference number: 3 (lower is better) Translates to: CIIMCVSCKRQA*PAQRHAYLGGT Trigger: AGTACCACCCAAGTAAGCATGTCTCTGTGCAGGTCATGCTTGCCTTTTACAAGAAACACACATGATGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 72 bp | TCTTTAGAAAGCATGTGGTTAAACAAAAGAATGCAGTaGGTGGTCTATGCATGCCTACAGTCCCAGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: SLESMWLNKRMQ*VVYACLQSQLL Trigger: CAGTAGCTGGGACTGTAGGCATGCATAGACCACTCACTGCATTCTTTTGTTTAACCACATGCTTTCTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR GCA 72 bp | GTTCTCATGCTAATTATGTTACCAAAAATACCTGTTTaGAGTGTCCCACATTTAGGACTAAAGGAAGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: VLMLIMLPKIPV*SVPHLGLKEAC Trigger: ACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAGCATGAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR TCA 72 bp | TCTCATGGTCTGTGTCATGGTAACTTACAAGATAGATaGCTGTACAACAATATGCAGGTAATAGTAAAATGC | + |
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Preference number: 3 (lower is better) Translates to: SHGLCHGNLQDR*LYNNMQVIVKC Trigger: GCATTTTACTATTACCTGCATATTGTTGTACAGTCATCTATCTTGTAAGTTACCATGACACAGACCATGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR GCA 90 bp | CCGACATGTAGGTGCAGGGGGAAAGCTGCCCAGGAGGGCTGCCCAGCCAGGTCCAGTCTCTTTGCCTCTTaGAATGTGAACACGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PTCRCRGKAAQEGCPARSSLFAS*NVNTKV Trigger: AACTTTCGTGTTCACATTGCAAGAGGCAAAGAGACT...GGACCTGGCTGGGCAGCCCTCCTGGGCAGCTTTCCCCCTGCACCTACATGTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR GCA 90 bp | TCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTGAGAATGGATCTGTACCGATTCTACCAGTaGAGAGGCTTGTGCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSAGIKGVRHHCPVRMDLYRFYQ*RGLCLS Trigger: ACTGAGGCACAAGCCTCTGCACTGGTAGAATCGGTA...CAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR TCA 90 bp | TCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTGAGAATGGATCTGTTGCCTCTTGCAATGTaGACACGAAAGTTTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSAGIKGVRHHCPVRMDLLPLAM*TRKFWS Trigger: GGACCAAAACTTTCGTGTTCACATTGCAAGAGGCAA...CAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR TCA 90 bp | GGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAAAGGCAGCAGGATGGGATTAACCCTGCGAGGATGTaGCCTCCTACTTGTATAGGG | + |
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Preference number: 4 (lower is better) Translates to: GCGCGCVKTRKERQQDGINPARM*PPTCIG Trigger: CCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTT...AATCCCATCCTGCTGCCTTTCCTTCCTTGTTTTTACACACCCACACCCACACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| 3UTR CAA 72 bp | TATAGTCTCTGCATTGGGAGGCTGAACAGGAGGATCTaGGGAGCCACGATGTTTAAGACCAGCCTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YSLCIGRLNRRI*GATMFKTSLKS Trigger: GCTCTTCAGGCTGGTCTTAAACATCGTGGCTCCCAAGATCCTCCTGTTCAGCCTCCCAATGCAGAGACTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAAAGGCAGCAGGATGGGATTGTACTCTTTGTTCTCTaGGTACAGCTGGCAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCGCGCVKTRKERQQDGIVLFVL*VQLAGV Trigger: TACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTAC...AATCCCATCCTGCTGCCTTTCCTTCCTTGTTTTTACACACCCACACCCACACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCGCCATGACGAGAGACTaGCTAAAACGACTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSVGKALSEGQEETPAMTRD*LKRLHT Trigger: TGTATGCAGTCGTTTTAGCCAGTCTCTCGTCATGGC...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAGGATCTTGGAAACTTTaGACCCAAATACCGATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGGSWKL*TQIPIL Trigger: TAGAATCGGTATTTGGGTTCAAAGTTTCCAAGATCC...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | AAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTCCCCAGTTCCTGGGAGGTAAGTaGGCATTCTTACCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPVCSVPHLGLKEACPQFLGGK*AFLPSS Trigger: GCTACTTGGTAAGAATGCTCACTTACCTCCCAGGAA...CTGGGGACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCCCGTATTGCTTATTTTaGGGACATATTCAACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSVGKALSEGQEETPPYCLF*GHIQLG Trigger: ACCCAGTTGAATATGTCCTCAAAATAAGCAATACGG...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | GTTACCAAAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGCAGTGCAGAGGCTTGTaGCTCAGTAAAAACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTKNTCLQCPTFRTKGSLQCRGL*LSKNGL Trigger: AAGCCCGTTTTTACTGAGGCACAAGCCTCTGCACTG...CAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGAATGAGACCCAAGTTCCAGCCCATTTTTCTGGTCCTGATTGGCCAAGTCTCATAGCTAGGGAGTaGCTGGATCTTGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IWNETQVPAHFSGPDWPSLIARE*LDLGNF Trigger: AAAGTTTCCAAGATCCAGCCACTCCCTAGCTATGAG...ACTTGGCCAATCAGGACCAGAAAAATGGGCTGGAACTTGGGTCTCATTCCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| 3UTR CAA 72 bp | ATGACCTGCACAGAGACATGCTTACTTGGGTGGTACTaGTGTGGATTTCCTTGTTTCTGTAGTGCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTCTETCLLGWY*CGFPCFCSAEV Trigger: AACCTCAGCACTACAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAGGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGAATGAGACCCAAGTTCCAGCCCATTTTTCTGGTCCTGATTGGCCAAGTAGACTTAACTTTGGATaGTGGAATTCCTCTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWNETQVPAHFSGPDWPSRLNFG*WNSSRA Trigger: AGCCCTAGAGGAATTCCATCATCCAAAGTTAAGTCT...ACTTGGCCAATCAGGACCAGAAAAATGGGCTGGAACTTGGGTCTCATTCCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | GTTACCAAAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTGTTGGGAATCCAGCTaGTCTCAGGAACATGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTKNTCLQCPTFRTKGSLCWESS*SQEHDD Trigger: GTCATCATGTTCCTGAGAGCAGCTGGATTCCCAACA...CAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAATTCTCTGGGTACAGCTaGCAGGAGTATGCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQFSGYS*QEYAAM Trigger: CATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAA...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | CTAATTATGTTACCAAAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGCAGCTGGCAGGAGTATaGAGCCATGACGAGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LIMLPKIPVCSVPHLGLKQLAGV*SHDERL Trigger: CAGTCTCTCGTCATGGCTGCATACTCCTGCCAGCTG...CTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAACCCATGTCGAACAGCTaGTGTAAATGCTTCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQPMSNS*CKCFHP Trigger: CGGATGGAAGCATTTACAGCAGCTGTTCGACATGGG...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | AAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTCCCCAGAGGAACATGATGACATaGTTCTGCATTTCAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIPVCSVPHLGLKEACPQRNMMT*FCISIS Trigger: GCTGATTGAAATGCAGAACCATGTCATCATGTTCCT...CTGGGGACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAAAGTAAAAACAAAGCCTaGCTCTCTACAGCCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQSKNKA*LSTAVR Trigger: CCTGACGGCTGTAGAGAGGCAGGCTTTGTTTTTACT...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGAGACATGCTTACTTGGGTGGTACTTGTGTGGATTTCCTTGTTTCTGCAGATTCATAGGACTTaGCAGTTTCAAACCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LHRDMLTWVVLVWISLFLQIHRT*QFQTRF Trigger: AAATCTGGTTTGAAACTGCCAAGTCCTATGAATCTG...CAGAAACAAGGAAATCCACACAAGTACCACCCAAGTAAGCATGTCTCTGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAGAACATGTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTGCATTCAGAGGCTGACTTGCTaGGGTCTACTAAAATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKEHVGPNRMVYHYSLCIQRLTC*GLLKCY Trigger: ATAACATTTTAGTAGACCTCAGCAAGTCAGCCTCTG...AATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCACATGTTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAAAGCTATTGGTCTTCCTaGGAGGTAAGTGAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQSYWSS*EVSEHS Trigger: AGAATGCTCACTTACCTCCCAGGAAGACCAATAGCT...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATGTTACCAAAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGGCAACCTCAGCTATTaGTCTTCCTGGGAGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIMLPKIPVCSVPHLGLKGNLSY*SSWEVS Trigger: ACTTACCTCCCAGGAAGACCAATAGCTGAGGTTGCC...CTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAACATGTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTGCATTATGATGACATGGTTCTaGATTTCAATCAGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKEHVGPNRMVYHYSLCIMMTWF*ISISSG Trigger: TCCAGAGCTGATTGAAATGCAGAACCATGTCATCAT...AATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCACATGTTCTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAACCTATTTCATATAATTaGTGGTGGCTGATGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQPISYN*WWLMAT Trigger: GGTTGCCATCAGCCACCAGCAATTATATGAAATAGG...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAATCAGCTCTGGAGTTTaGCTAGACTCCGTATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKISSGV*LDSVLL Trigger: AAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGAT...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAATCATATAATTGCTGGTaGCTGATGGCAACCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKSYNCW*LMATSA Trigger: AGCTGAGGTTGCCATCAGCCACCAGCAATTATATGA...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CCA 90 bp | CTAATTATGTTACCAAAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGAGGGCTTTATCCAATTaGGCAGCCAGCCTTCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LIMLPKIPVCSVPHLGLKRALSN*AASLPI Trigger: AATAGGAAGGCTGGCTGCCCAATTGGATAAAGCCCT...CTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAATTACCAAGTAGCTTTTaGCTCCAGATCCACTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKLPSSF*LQIHCQ Trigger: TTGACAGTGGATCTGGAGTCAAAAGCTACTTGGTAA...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| 3UTR CAA 72 bp | TGTTCTCATGCTAATTATGTTACCAAAAATACCTGTTaGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHANYVTKNTC*QCPTFRTKGSL Trigger: CAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTTTGGTAACATAATTAGCATGAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAATTTTCAGATTCCAGATaGAGTTCTCCCGATGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQFSDSR*SSPDEK Trigger: TTTTTCATCGGGAGAACTTCATCTGGAATCTGAAAA...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR TCA 90 bp | GATCTTCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAATGAAGTTCTCCCGATaGAAAAGACTTAACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLRRLKTSHVSSCVFLVKMKFSR*KRLNFG Trigger: TCCAAAGTTAAGTCTTTTTCATCGGGAGAACTTCAT...TTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGAAGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR GCA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAAGTACATGATAACGATTaGCACTTCAAACACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SETEDKSCIIMCVSCKRQVHDND*HFKHIV Trigger: TACTATGTGTTTGAAGTGGCAATCGTTATCATGTAC...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| 3UTR CAA 72 bp | ATTAACACAAGCTTTTCTAAGGTCACTTGTAACGGCTaGTGTTCTCATGCTAATTATGTTACCAAAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: INTSFSKVTCNG*CSHANYVTKNT Trigger: GGTATTTTTGGTAACATAATTAGCATGAGAACACAAGCCGTTACAAGTGACCTTAGAAAAGCTTGTGTTAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGACTCCCGGTTTCGACTTaGGCTCAGGGCACCCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGLPVST*AQGTHV Trigger: TACATGGGTGCCCTGAGCCAAAGTCGAAACCGGGAG...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGAAAGGCAGCAGGATGGGATTTACCAGTGCAGAGGCTaGTGCCTCAGTAAAAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGCGCVKTRKERQQDGIYQCRG*CLSKNG Trigger: CCCGTTTTTACTGAGGCACAAGCCTCTGCACTGGTA...AATCCCATCCTGCTGCCTTTCCTTCCTTGTTTTTACACACCCACACCCACACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS GCA 90 bp | AGCCTGCCTCTCTACAGCCGTCAGGGGGATCACACTTTCAAACCCTaGGAGGATGTGACCTCCTACTTGTATAGGGTTTGTGCTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLYSRQGDHTFKP*EDVTSYLYRVCAFN Trigger: ATTGAAAGCACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTGATCCCCCTGACGGCTGTAGAGAGGCAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS CCA 90 bp | CTTCCATCCGGTTTTGGCTGTAATCATGAGGTACTCTTTGTTCTCTaGGTACAGCTGGCAGGAGTATGCAGCCATGACGAGAGACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSGFGCNHEVLFVL*VQLAGVCSHDERLA Trigger: AGCCAGTCTCTCGTCATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTACCTCATGATTACAGCCAAAACCGGATGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTGAGAATGGATCTGGTCATTACTTCTTCCTaGAACATCCGAATGACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAGIKGVRHHCPVRMDLVITSS*NIRMTC Trigger: ACAGGTCATTCGGATGTTCAAGGAAGAAGTAATGAC...CAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS GCA 90 bp | TGGCTGGATCTTGGAAACTTTGAACCCAAATACCGATTCTACCAGTaGAGAGGCTTGTGCCTCAGTAAAAACGGGCTTGGCAGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLDLGNFEPKYRFYQ*RGLCLSKNGLGRSL Trigger: CAGGCTTCTGCCAAGCCCGTTTTTACTGAGGCACAAGCCTCTGCACTGGTAGAATCGGTATTTGGGTTCAAAGTTTCCAAGATCCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGTGAGAATGGATCTGTGGATCTTGGAAACTTaGAACCCAAATACCGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSAGIKGVRHHCPVRMDLWILET*NPNTDS Trigger: AGAATCGGTATTTGGGTTCAAAGTTTCCAAGATCCA...CAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS CCA 90 bp | GTTTTGGCTGTAATCATGAGGTACTCTTTGTTCTCTGGGTACAGCTaGCAGGAGTATGCAGCCATGACGAGAGACTGGCTAAAACGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VLAVIMRYSLFSGYS*QEYAAMTRDWLKRL Trigger: CAGTCGTTTTAGCCAGTCTCTCGTCATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTACCTCATGATTACAGCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCGTGAACACGAAAGTTTaGGTCCTCATAGCTAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKDFSVGKALSEGQEETPVNTKV*VLIARE Trigger: CTCCCTAGCTATGAGGACCAAAACTTTCGTGTTCAC...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATAATGGCCTTGCCTGGATGCCTACATGTGCTTCAATGCACTTGTGTCTGAATCAGCTCTGGAGTTaGGCTAGACTCCGTATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDNGLAWMPTCASMHLCLNQLWS*ARLRIA Trigger: AGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATT...CAGACACAAGTGCATTGAAGCACATGTAGGCATCCAGGCAAGGCCATTATCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS TCA 90 bp | TCTACAGCCGTCAGGGGGATCACACTTTCAAACCCTGCGAGGATGTaGCCTCCTACTTGTATAGGGTTTGTGCTTTCAATCATCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: STAVRGITLSNPARM*PPTCIGFVLSIIMY Trigger: GTACATGATGATTGAAAGCACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTGATCCCCCTGACGGCTGTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS GCA 90 bp | GCTGTTGGGAATCCAGCTGCTCTCAGGAACATGATGACATGGTTCTaGATTTCAATCAGCTCTGGAGTTTGGCTAGACTCCGTATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVGNPAALRNMMTWF*ISISSGVWLDSVLL Trigger: AAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAATGCAGAACCATGTCATCATGTTCCTGAGAGCAGCTGGATTCCCAACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | GTACTGCCCCCATGTGTGTGGGTGTGGGTGTGGGTGTGTAAAAACAAGGAAGGATGGCTAGACTCCGTATaGCTTATTTTGAGGACATAT | + |
|
Preference number: 5 (lower is better) Translates to: VLPPCVWVWVWVCKNKEGWLDSV*LILRTY Trigger: ATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCA...TCCTTCCTTGTTTTTACACACCCACACCCACACCCACACACATGGGGGCAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS GCA 90 bp | TCAAACCAGATTTCTTCAACGGCTTTCTGGCCCATGTCGAACAGCTaGTGTAAATGCTTCCATCCGGTTTTGGCTGTAATCATGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SNQISSTAFWPMSNS*CKCFHPVLAVIMRY Trigger: GTACCTCATGATTACAGCCAAAACCGGATGGAAGCATTTACAGCAGCTGTTCGACATGGGCCAGAAAGCCGTTGAAGAAATCTGGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | AAAATACCTGTTTGCAGTGTCCCACATTTAGGACTAAAGGAAGCCTGTCCCCAGTCTCCAGAGGCTGACTaGCTGAGGTCTACTAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KIPVCSVPHLGLKEACPQSPEAD*LRSTKM Trigger: CATTTTAGTAGACCTCAGCAAGTCAGCCTCTGGAGA...CTGGGGACAGGCTTCCTTTAGTCCTAAATGTGGGACACTGCAAACAGGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACTTTTCTGTGGGGAAGGCACTATCAGAGGGACAAGAAGAGACACCCTCCGTATTGCTTATTTaGAGGACATATTCAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKDFSVGKALSEGQEETPSVLLI*RTYSTG Trigger: CCCAGTTGAATATGTCCTCAAAATAAGCAATACGGA...GGGTGTCTCTTCTTGTCCCTCTGATAGTGCCTTCCCCACAGAAAAGTCTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 90 bp | TCTTGCAATGTGAACACGAAAGTTTTGGTCCTCATAGCTAGGGAGTaGCTGGATCTTGGAAACTTTGAACCCAAATACCGATTCTACCAG | + |
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Preference number: 5 (lower is better) Translates to: SCNVNTKVLVLIARE*LDLGNFEPKYRFYQ Trigger: CTGGTAGAATCGGTATTTGGGTTCAAAGTTTCCAAGATCCAGCCACTCCCTAGCTATGAGGACCAAAACTTTCGTGTTCACATTGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 90 bp | TTGAACATCCGAATGACCTGTTCAACAATCTCCCGGTTTCGACTTTaGCTCAGGGCACCCATGTATTTCTCTAGAAGAGGAACATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LNIRMTCSTISRFRL*LRAPMYFSRRGTFF Trigger: GAAAAATGTTCCTCTTCTAGAGAAATACATGGGTGCCCTGAGCCAAAGTCGAAACCGGGAGATTGTTGAACAGGTCATTCGGATGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR CAA 90 bp | AACAAAGAACATGTGGGGCCAAACAGAATGGTGTATCACTATAGTCTCTGCATTGGGAGTGGCTGGATCTaGGAAACTTTGAACCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: NKEHVGPNRMVYHYSLCIGSGWI*ETLNPN Trigger: ATTTGGGTTCAAAGTTTCCAAGATCCAGCCACTCCC...AATGCAGAGACTATAGTGATACACCATTCTGTTTGGCCCCACATGTTCTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS-3UTR CAA 90 bp | TCGGAGACTGAAGACAAGTCATGTATCATCATGTGTGTTTCTTGTAAAAGGCAAATCATGAGGTACTCTTaGTTCTCTGGGTACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SETEDKSCIIMCVSCKRQIMRYS*FSGYSW Trigger: CCAGCTGTACCCAGAGAACAAAGAGTACCTCATGAT...TTGCCTTTTACAAGAAACACACATGATGATACATGACTTGTCTTCAGTCTCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 90 bp | AGTTTGGCTAGACTCCGTATTGCTTATTTTGAGGACATATTCAACTaGGTCATCTGTAGTCTCTTTGCCTCTTGCAATGTGAACACGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLARLRIAYFEDIFN*VICSLFASCNVNTK Trigger: TTTCGTGTTCACATTGCAAGAGGCAAAGAGACTACAGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 90 bp | TTGTATAGGGTTTGTGCTTTCAATCATCATGTACATGATAACGATTaGCACTTCAAACACATAGTAGCCATAGCTCATGTCACCGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LYRVCAFNHHVHDND*HFKHIVAIAHVTEV Trigger: GACTTCGGTGACATGAGCTATGGCTACTATGTGTTTGAAGTGGCAATCGTTATCATGTACATGATGATTGAAAGCACAAACCCTATACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | ACCAGTGCAGAGGCTTGTGCCTCAGTAAAAACGGGCTaGGCAGAAGCCTGTGACTGCCAGCCAGCTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: TSAEACASVKTG*AEACDCQPAPL Trigger: AAGTGGAGCTGGCTGGCAGTCACAGGCTTCTGCCAAGCCCGTTTTTACTGAGGCACAAGCCTCTGCACTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 72 bp | CTCTACAGCCGTCAGGGGGATCACACTTTCAAACCCTaGGAGGATGTGACCTCCTACTTGTATAGGGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LYSRQGDHTFKP*EDVTSYLYRVC Trigger: ACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTGATCCCCCTGACGGCTGTAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 72 bp | GTACTCTTTGTTCTCTGGGTACAGCTGGCAGGAGTATaGAGCCATGACGAGAGACTGGCTAAAACGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VLFVLWVQLAGV*SHDERLAKTTA Trigger: TGCAGTCGTTTTAGCCAGTCTCTCGTCATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | CCAGATCCACTGTCAATGGATATGAGAGAGATGGTGTaGTCCCCTTTAGTTCGGCATACGGAGGCTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PDPLSMDMREMV*SPLVRHTEAVG Trigger: CCCAACAGCCTCCGTATGCCGAACTAAAGGGGACAACACCATCTCTCTCATATCCATTGACAGTGGATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | GTAATCATGAGGTACTCTTTGTTCTCTGGGTACAGCTaGCAGGAGTATGCAGCCATGACGAGAGACTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: VIMRYSLFSGYS*QEYAAMTRDWL Trigger: TAGCCAGTCTCTCGTCATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTACCTCATGATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | TTTGAACCCAAATACCGATTCTACCAGTGCAGAGGCTaGTGCCTCAGTAAAAACGGGCTTGGCAGAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FEPKYRFYQCRG*CLSKNGLGRSL Trigger: CAGGCTTCTGCCAAGCCCGTTTTTACTGAGGCACAAGCCTCTGCACTGGTAGAATCGGTATTTGGGTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | CTTTTGACTCCAGATCCACTGTCAATGGATATGAGAGAGATGGTGTaGTCCCCTTTAGTTCGGCATACGGAGGCTGTTGGGAATCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLTPDPLSMDMREMV*SPLVRHTEAVGNPA Trigger: AGCTGGATTCCCAACAGCCTCCGTATGCCGAACTAAAGGGGACAACACCATCTCTCTCATATCCATTGACAGTGGATCTGGAGTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | TTCTGGCCCATGTCGAACAGCTGCTGTAAATGCTTCCATCCGGTTTaGGCTGTAATCATGAGGTACTCTTTGTTCTCTGGGTACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FWPMSNSCCKCFHPV*AVIMRYSLFSGYSW Trigger: CCAGCTGTACCCAGAGAACAAAGAGTACCTCATGATTACAGCCAAAACCGGATGGAAGCATTTACAGCAGCTGTTCGACATGGGCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS TCA 72 bp | GTCAGGGGGATCACACTTTCAAACCCTGCGAGGATGTaGCCTCCTACTTGTATAGGGTTTGTGCTTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: VRGITLSNPARM*PPTCIGFVLSI Trigger: GATTGAAAGCACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTGATCCCCCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | CGAATGACCTGTTCAACAATCTCCCGGTTTCGACTTTaGCTCAGGGCACCCATGTATTTCTCTAGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RMTCSTISRFRL*LRAPMYFSRRG Trigger: TCCTCTTCTAGAGAAATACATGGGTGCCCTGAGCCAAAGTCGAAACCGGGAGATTGTTGAACAGGTCATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | TGTAAATGCTTCCATCCGGTTTTGGCTGTAATCATGAGGTACTCTTaGTTCTCTGGGTACAGCTGGCAGGAGTATGCAGCCATGACGAGA | + |
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Preference number: 6 (lower is better) Translates to: CKCFHPVLAVIMRYS*FSGYSWQEYAAMTR Trigger: TCTCGTCATGGCTGCATACTCCTGCCAGCTGTACCCAGAGAACAAAGAGTACCTCATGATTACAGCCAAAACCGGATGGAAGCATTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 72 bp | TCCAATTGGGCAGCCAGCCTTCCTATTTCATATAATTaGTGGTGGCTGATGGCAACCTCAGCTATTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SNWAASLPISYN*WWLMATSAIGL Trigger: AAGACCAATAGCTGAGGTTGCCATCAGCCACCAGCAATTATATGAAATAGGAAGGCTGGCTGCCCAATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 72 bp | ATTTCTTCAACGGCTTTCTGGCCCATGTCGAACAGCTaGTGTAAATGCTTCCATCCGGTTTTGGCTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: ISSTAFWPMSNS*CKCFHPVLAVI Trigger: GATTACAGCCAAAACCGGATGGAAGCATTTACAGCAGCTGTTCGACATGGGCCAGAAAGCCGTTGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | GTGAACACGAAAGTTTTGGTCCTCATAGCTAGGGAGTaGCTGGATCTTGGAAACTTTGAACCCAAATACCGA | + |
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Preference number: 6 (lower is better) Translates to: VNTKVLVLIARE*LDLGNFEPKYR Trigger: TCGGTATTTGGGTTCAAAGTTTCCAAGATCCAGCCACTCCCTAGCTATGAGGACCAAAACTTTCGTGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | TTGGCAGTTTCAAACCAGATTTCTTCAACGGCTTTCTaGCCCATGTCGAACAGCTGCTGTAAATGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LAVSNQISSTAF*PMSNSCCKCFH Trigger: ATGGAAGCATTTACAGCAGCTGTTCGACATGGGCCAGAAAGCCGTTGAAGAAATCTGGTTTGAAACTGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | GTCATCTGTAGTCTCTTTGCCTCTTGCAATGTGAACACGAAAGTTTaGGTCCTCATAGCTAGGGAGTGGCTGGATCTTGGAAACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VICSLFASCNVNTKV*VLIAREWLDLGNFE Trigger: TTCAAAGTTTCCAAGATCCAGCCACTCCCTAGCTATGAGGACCAAAACTTTCGTGTTCACATTGCAAGAGGCAAAGAGACTACAGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | CAGGGGGATCACACTTTCAAACCCTGCGAGGATGTGACCTCCTACTaGTATAGGGTTTGTGCTTTCAATCATCATGTACATGATAACGAT | + |
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Preference number: 6 (lower is better) Translates to: QGDHTFKPCEDVTSY*YRVCAFNHHVHDND Trigger: ATCGTTATCATGTACATGATGATTGAAAGCACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTGATCCCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | AGCTCTGGAGTTTGGCTAGACTCCGTATTGCTTATTTaGAGGACATATTCAACTGGGTCATCTGTAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSGVWLDSVLLI*RTYSTGSSVVS Trigger: AGAGACTACAGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | CACACTTTCAAACCCTGCGAGGATGTGACCTCCTACTaGTATAGGGTTTGTGCTTTCAATCATCATGTACAT | + |
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Preference number: 6 (lower is better) Translates to: HTFKPCEDVTSY*YRVCAFNHHVH Trigger: ATGTACATGATGATTGAAAGCACAAACCCTATACAAGTAGGAGGTCACATCCTCGCAGGGTTTGAAAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | TGGTTCTGCATTTCAATCAGCTCTGGAGTTTGGCTAGACTCCGTATaGCTTATTTTGAGGACATATTCAACTGGGTCATCTGTAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: WFCISISSGVWLDSV*LILRTYSTGSSVVS Trigger: AGAGACTACAGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAATGCAGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | AGACTCCGTATTGCTTATTTTGAGGACATATTCAACTaGGTCATCTGTAGTCTCTTTGCCTCTTGCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: RLRIAYFEDIFN*VICSLFASCNV Trigger: CACATTGCAAGAGGCAAAGAGACTACAGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | GAACATGATGACATGGTTCTGCATTTCAATCAGCTCTaGAGTTTGGCTAGACTCCGTATTGCTTATTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: EHDDMVLHFNQL*SLARLRIAYFE Trigger: CTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAATGCAGAACCATGTCATCATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | GATGACATGGTTCTGCATTTCAATCAGCTCTGGAGTTaGGCTAGACTCCGTATTGCTTATTTTGAGGACATA | + |
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Preference number: 6 (lower is better) Translates to: DDMVLHFNQLWS*ARLRIAYFEDI Trigger: TATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAATGCAGAACCATGTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 90 bp | ATTTCAATCAGCTCTGGAGTTTGGCTAGACTCCGTATTGCTTATTTaGAGGACATATTCAACTGGGTCATCTGTAGTCTCTTTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ISISSGVWLDSVLLI*RTYSTGSSVVSLPL Trigger: AAGAGGCAAAGAGACTACAGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CCA 72 bp | ATGACATGGTTCTGCATTTCAATCAGCTCTGGAGTTTaGCTAGACTCCGTATTGCTTATTTTGAGGACATAT | + |
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Preference number: 6 (lower is better) Translates to: MTWFCISISSGV*LDSVLLILRTY Trigger: ATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAATGCAGAACCATGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS CAA 72 bp | ATTTCAATCAGCTCTGGAGTTTGGCTAGACTCCGTATaGCTTATTTTGAGGACATATTCAACTGGGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: ISISSGVWLDSV*LILRTYSTGSS Trigger: AGATGACCCAGTTGAATATGTCCTCAAAATAAGCAATACGGAGTCTAGCCAAACTCCAGAGCTGATTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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| CDS GCA 72 bp | GTTTGTGCTTTCAATCATCATGTACATGATAACGATTaGCACTTCAAACACATAGTAGCCATAGCTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: VCAFNHHVHDND*HFKHIVAIAHV Trigger: GACATGAGCTATGGCTACTATGTGTTTGAAGTGGCAATCGTTATCATGTACATGATGATTGAAAGCACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039742.8 |
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