Pregenerated sensors for HYI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006395Ensembl transcript IDs: ENSMUST00000006562.6, ENSMUST00000106393.8, ENSMUST00000194248.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATaGAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: QRRGLRTLTHRPRAA*RCCAEPYWPVRGWP Trigger: GGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR GCA 90 bp | GAGCTGCCTGGCTCCCCGCGGTCTGGGACCTGGGCCACTTGCACATaGCCGACAGTGGGCAGAAACTCCCTGATGTTTCCTGTGAGATTC | + |
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Preference number: 1 (lower is better) Translates to: ELPGSPRSGTWATCT*PTVGRNSLMFPVRF Trigger: GAATCTCACAGGAAACATCAGGGAGTTTCTGCCCACTGTCGGGCATGTGCAAGTGGCCCAGGTCCCAGACCGCGGGGAGCCAGGCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR CCA 90 bp | GCAGCATGCAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTaGCCCCGCCTGTCCCAGTATGAACGTAGCCAACTCAGACCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AACRCCAEPYWPVRG*PRLSQYERSQLRPS Trigger: GGAGGGTCTGAGTTGGCTACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTCTCTCCAGAGCTGCCTaGCTCCCCGCGGTCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAVQNLTGQSVGGPACPSLSRAA*LPAVWD Trigger: GTCCCAGACCGCGGGGAGCCAGGCAGCTCTGGAGAG...ACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGCAGCATGCAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTGGCCTAGCTCTCCAGAGCTaGCTGGCTCCCCGCGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PGQHAGAVQNLTGQSVGGLALQS*LAPRGL Trigger: CAGACCGCGGGGAGCCAGGCAGCTCTGGAGAGCTAG...GCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CCA 90 bp | CTTACTGGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTATGAACGTAGCCAACCCGCGGTCTGGGACCTaGGCCACTTGCACATGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: LTGQSVGGPACPSMNVANPRSGT*ATCTCP Trigger: CGGGCATGTGCAAGTGGCCCAGGTCCCAGACCGCGG...GTTGGCTACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACCTTACTGGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTATGAACGTTCTCCATCTCCCCCTTaGCTGCAGCCCGGTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AEPYWPVRGWPRLSQYERSPSPP*LQPGQP Trigger: GGGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGA...ACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR GCA 90 bp | CTTACTGGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTATGAACGTAGCCAACGGTCTCCCAACCTTCTaGAAAATGGCTGCCGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTGQSVGGPACPSMNVANGLPTF*KMAAAC Trigger: GCAAGCGGCAGCCATTTTGCAGAAGGTTGGGAGACC...GTTGGCTACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGGGCAGCATGCAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTGTGTCCAGGAAATACTaGGGGTCTGTGATTCGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: APGQHAGAVQNLTGQSVGVSRKY*GSVIRV Trigger: CACCCGAATCACAGACCCCCAGTATTTCCTGGACAC...ACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTAGCTCTCCAGAGCTGCCTGGCTCCCCGCGGTCTGGGACCTGGGCCACTTCCATGATCTGCCAGTaGAATATGTCCATCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KSSSPELPGSPRSGTWATSMICQ*NMSICN Trigger: GTTGCAGATGGACATATTCCACTGGCAGATCATGGA...AGTGGCCCAGGTCCCAGACCGCGGGGAGCCAGGCAGCTCTGGAGAGCTAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATGATCTGCCAGTGGAATATGTCCATCTGCAACTGCAGATTGGGTCTCCCAAGCCAGAACGCCAGCTaGATGCTTCAGATTCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SMICQWNMSICNCRLGLPSQNAS*MLQILH Trigger: GTGGAGAATCTGAAGCATGCAGCTGGCGTTCTGGCT...TGGGAGACCCAATCTGCAGTTGCAGATGGACATATTCCACTGGCAGATCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR GCA 72 bp | ACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTaGAGAACCTTACTGGCCAGTCCGTGGGTGGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: TNTPPQGSMQVL*RTLLASPWVAP Trigger: CGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR CCA 72 bp | CCCAGGGCAGCATGCAGGTGCTGTGCAGAACCTTACTaGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: PRAACRCCAEPY*PVRGWPRLSQY Trigger: ATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CAA 90 bp | TTGCCGGGGCGTGTCCAGGAAATACTGGGGGTCTGTGATTCGGGTGTTGATGGGGTCTCCATCTCCCCCTaGACTGCAGCCCGGTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LPGRVQEILGVCDSGVDGVSISP*TAARSA Trigger: GGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGAC...CCCATCAACACCCGAATCACAGACCCCCAGTATTTCCTGGACACGCCCCGGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR GCA 72 bp | GGACTCCGGACACTAACACACCGCCCCAGGGCAGCATaGAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: GLRTLTHRPRAA*RCCAEPYWPVR Trigger: ACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR CCA 72 bp | ATGGCTGCCGCTTGCCGGGGCGTGTCCAGGAAATACTaGGGGTCTGTGATTCGGGTGTTGATGGGCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: MAAACRGVSRKY*GSVIRVLMGSS Trigger: GCTGGAGCCCATCAACACCCGAATCACAGACCCCCAGTATTTCCTGGACACGCCCCGGCAAGCGGCAGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR CCA 72 bp | AGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTaGCCCCGCCTGTCCCAGTATGAACGTAGCCAACTC | + |
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Preference number: 3 (lower is better) Translates to: RCCAEPYWPVRG*PRLSQYERSQL Trigger: GAGTTGGCTACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR GCA 72 bp | CTGCAGATTGGGTCTCCCAACCTTCTGCAAAATGGCTaGCGCTTGCCGGGGCGTGTCCAGGAAATACTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQIGSPNLLQNG*RLPGRVQEILG Trigger: CCCCAGTATTTCCTGGACACGCCCCGGCAAGCGGCAGCCATTTTGCAGAAGGTTGGGAGACCCAATCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR CCA 72 bp | GCAACTGCAGATTGGGTCTCCCAACCTTCTGCAAAATaGCTGCCGCTTGCCGGGGCGTGTCCAGGAAATACT | + |
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Preference number: 3 (lower is better) Translates to: ATADWVSQPSAK*LPLAGACPGNT Trigger: AGTATTTCCTGGACACGCCCCGGCAAGCGGCAGCCATTTTGCAGAAGGTTGGGAGACCCAATCTGCAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCGAGGCCGATACTCGCAACCCACAAATCCTTGGTAGCCCTCATCTTCTAATCTGCAACTGCAGATaGGGTCTCCCAACCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LLEADTRNPQILGSPHLLICNCR*GLPTFC Trigger: GCAGAAGGTTGGGAGACCCAATCTGCAGTTGCAGAT...TAGAAGATGAGGGCTACCAAGGATTTGTGGGTTGCGAGTATCGGCCTCGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| 3UTR GCA 72 bp | TCCATGATCTGCCAGTGGAATATGTCCATCTGCAACTaGAGATTGGGTCTCCCAACCTTCTGCAAAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SMICQWNMSICN*RLGLPTFCKMA Trigger: AGCCATTTTGCAGAAGGTTGGGAGACCCAATCTGCAGTTGCAGATGGACATATTCCACTGGCAGATCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCGCTCGCCAGCGCCTaGGGGGACTCGGTGTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGLRTLTHRPRAACRCCALASA*GDSVYG Trigger: GCCGTACACCGAGTCCCCCCAGGCGCTGGCGAGCGC...ACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CCCCAGGGCAGCATGCAGGTGCTGTGCAGAACCTTACTGGCCAGTCCGTGGGTGGCGCTCGCCAGCGCCTaGGGGGACTCGGTGTACGGC | + |
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Preference number: 4 (lower is better) Translates to: PQGSMQVLCRTLLASPWVALASA*GDSVYG Trigger: GCCGTACACCGAGTCCCCCCAGGCGCTGGCGAGCGC...CACCCACGGACTGGCCAGTAAGGTTCTGCACAGCACCTGCATGCTGCCCTGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGGCCCGGTCAGCCCCTTaGGGTACTCGGCCAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLARSAP*GTRPAI Trigger: GATGGCTGGCCGAGTACCCCAAGGGGCTGACCGGGC...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCGCCCGGTCAGCCCCTTaGGGTACTCGGCCAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: QRRGLRTLTHRPRAACRCARSAP*GTRPAI Trigger: GATGGCTGGCCGAGTACCCCAAGGGGCTGACCGGGC...GCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCCTCTCCAGAGCTGCCTaGCTCCCCGCGGTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QRRGLRTLTHRPRAACRCLSRAA*LPAVWD Trigger: GTCCCAGACCGCGGGGAGCCAGGCAGCTCTGGAGAG...GCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCCTCTCCAGAGCTGCCTaGCTCCCCGCGGTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EGTPDTNTPPQGSMQVLCLSRAA*LPAVWD Trigger: GTCCCAGACCGCGGGGAGCCAGGCAGCTCTGGAGAG...GCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTCTCCATCTCCCCCTTaGCTGCAGCCCGGTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLSPSPP*LQPGQP Trigger: GGGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGA...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGCTAGCTCTCCAGAGCTaGCTGGCTCCCCGCGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLLALQS*LAPRGL Trigger: CAGACCGCGGGGAGCCAGGCAGCTCTGGAGAGCTAG...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCCGCGGTCTGGGACCTaGGCCACTTGCACATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVPRSGT*ATCTCP Trigger: CGGGCATGTGCAAGTGGCCCAGGTCCCAGACCGCGG...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCACCGCGGTCTGGGACCTaGGCCACTTGCACATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCAPRSGT*ATCTCP Trigger: CGGGCATGTGCAAGTGGCCCAGGTCCCAGACCGCGG...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTTACTGGCCAGTCCGTaGGTGGCCCCGCCTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLLLASP*VAPPVP Trigger: TGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAA...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR TCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATCTCCATCTCCCCCTTaGCTGCAGCCCGGTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCASPSPP*LQPGQP Trigger: GGGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGA...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTAGCTCTCCAGAGCTaGCTGGCTCCCCGCGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVLALQS*LAPRGL Trigger: CAGACCGCGGGGAGCCAGGCAGCTCTGGAGAGCTAG...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGCCATCAGGTGGATCCTaGGGCAGCCCAGAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLPSGGS*GSPEPW Trigger: CCAAGGCTCTGGGCTGCCCCAGGATCCACCTGATGG...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATTACTGGCCAGTCCGTaGGTGGCCCCGCCTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCALLASP*VAPPVP Trigger: TGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAA...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGGAGCCCGGGGAGCTCTaGAAACAGCCAGGAGACGTT | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLEPGEL*KQPGDV Trigger: AACGTCTCCTGGCTGTTTCCAGAGCTCCCCGGGCTC...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCGAGCCCGGGGAGCTCTaGAAACAGCCAGGAGACGTT | + |
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Preference number: 4 (lower is better) Translates to: QRRGLRTLTHRPRAACRCEPGEL*KQPGDV Trigger: AACGTCTCCTGGCTGTTTCCAGAGCTCCCCGGGCTC...GCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCGGCAGCCCAGAGCCTTaGCATACAGCACAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QRRGLRTLTHRPRAACRCGSPEP*HTAQPA Trigger: AGCAGGCTGTGCTGTATGCCAAGGCTCTGGGCTGCC...GCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCACCATCAGGTGGATCCTaGGGCAGCCCAGAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCAPSGGS*GSPEPW Trigger: CCAAGGCTCTGGGCTGCCCCAGGATCCACCTGATGG...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCAGGCAGCCCAGAGCCTTaGCATACAGCACAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCAGSPEP*HTAQPA Trigger: AGCAGGCTGTGCTGTATGCCAAGGCTCTGGGCTGCC...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGGGTCTCCCAACCTTCTaGAAAATGGCTGCCGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLGLPTF*KMAAAC Trigger: GCAAGCGGCAGCCATTTTGCAGAAGGTTGGGAGACC...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CTTACTGGCCAGTCCGTGGGTGGCCCCGCCTGTCCCAGTATGAACGTAGCCAACGAGCCCGGGGAGCTCTaGAAACAGCCAGGAGACGTT | + |
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Preference number: 4 (lower is better) Translates to: LTGQSVGGPACPSMNVANEPGEL*KQPGDV Trigger: AACGTCTCCTGGCTGTTTCCAGAGCTCCCCGGGCTC...GTTGGCTACGTTCATACTGGGACAGGCGGGGCCACCCACGGACTGGCCAGTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106393.8 |
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| CDS-3UTR GCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGGGTCTCCCAACCTTCTaGAAAATGGCTGCCGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVGLPTF*KMAAAC Trigger: GCAAGCGGCAGCCATTTTGCAGAAGGTTGGGAGACC...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCGTGTCCAGGAAATACTaGGGGTCTGTGATTCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QRRGLRTLTHRPRAACRCVSRKY*GSVIRV Trigger: CACCCGAATCACAGACCCCCAGTATTTCCTGGACAC...GCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGAGCCAGAACGCCAGCTaGATGCTTCAGATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVSQNAS*MLQILH Trigger: GTGGAGAATCTGAAGCATGCAGCTGGCGTTCTGGCT...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCAAGCCAGAACGCCAGCTaGATGCTTCAGATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCASQNAS*MLQILH Trigger: GTGGAGAATCTGAAGCATGCAGCTGGCGTTCTGGCT...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGGTGTCCAGGAAATACTaGGGGTCTGTGATTCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVVSRKY*GSVIRV Trigger: CACCCGAATCACAGACCCCCAGTATTTCCTGGACAC...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR GCA 90 bp | GAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCTTCCCATCCATGATCTaGCAGTGGAATATGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: EGTPDTNTPPQGSMQVLCFPSMI*QWNMSI Trigger: GATGGACATATTCCACTGGCAGATCATGGATGGGAA...GCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGTCCATGATCTGCCAGTaGAATATGTCCATCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVSMICQ*NMSICN Trigger: GTTGCAGATGGACATATTCCACTGGCAGATCATGGA...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CCA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATCCATGATCTGCCAGTaGAATATGTCCATCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: RGLRTLTHRPRAACRCCASMICQ*NMSICN Trigger: GTTGCAGATGGACATATTCCACTGGCAGATCATGGA...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS GCA 90 bp | GGCCAGGCCACCTCGGCCGCTTCGAAGCCCGCACGGCCCGCGGCGTaGAGCCGCTCGGGGAGCCCGGGGAGCTCTGGAAACAGCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GQATSAASKPARPAA*SRSGSPGSSGNSQE Trigger: CTCCTGGCTGTTTCCAGAGCTCCCCGGGCTCCCCGAGCGGCTGCACGCCGCGGGCCGTGCGGGCTTCGAAGCGGCCGAGGTGGCCTGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS CCA 90 bp | AGCACCAGCCGCAGTCCCGCAGTCTGCGCCGCGCTCGCCAGCGCCTaGGGGGACTCGGTGTACGGCCAGGCCACCTCGGCCGCTTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: STSRSPAVCAALASA*GDSVYGQATSAASK Trigger: CTTCGAAGCGGCCGAGGTGGCCTGGCCGTACACCGAGTCCCCCCAGGCGCTGGCGAGCGCGGCGCAGACTGCGGGACTGCGGCTGGTGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCAAGCCCGGTCAGCCCCTaGGGGTACTCGGCCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RGLRTLTHRPRAACRCCASPVSP*GYSASH Trigger: ATGGCTGGCCGAGTACCCCAAGGGGCTGACCGGGCT...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGAGCCCGGTCAGCCCCTaGGGGTACTCGGCCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SEEGTPDTNTPPQGSMQVSPVSP*GYSASH Trigger: ATGGCTGGCCGAGTACCCCAAGGGGCTGACCGGGCT...CACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGGTCTCCATCTCCCCCTaGACTGCAGCCCGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: EEGTPDTNTPPQGSMQVLVSISP*TAARSA Trigger: GGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGAC...CAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | AGGAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGTCTCCATCTCCCCCTaGACTGCAGCCCGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RRGLRTLTHRPRAACRCCVSISP*TAARSA Trigger: GGCTGACCGGGCTGCAGTCAAGGGGGAGATGGAGAC...ACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATGGGACCTGGGCCACTaGCACATGCCCGACAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: RGLRTLTHRPRAACRCCAWDLGH*HMPDSG Trigger: CCCACTGTCGGGCATGTGCAAGTGGCCCAGGTCCCA...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATCTGTGATTCGGGTGTaGATGGGCTCCAGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: RGLRTLTHRPRAACRCCASVIRV*MGSSSP Trigger: GGGACTGCTGGAGCCCATCAACACCCGAATCACAGA...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCATCTGCAACTGCAGATaGGGTCTCCCAACCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: EGTPDTNTPPQGSMQVLCICNCR*GLPTFC Trigger: GCAGAAGGTTGGGAGACCCAATCTGCAGTTGCAGAT...GCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS-3UTR CAA 90 bp | AGGGGACTCCGGACACTAACACACCGCCCCAGGGCAGCATGCAGGTGCTGTGCAATCTGCAACTGCAGATaGGGTCTCCCAACCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: RGLRTLTHRPRAACRCCAICNCR*GLPTFC Trigger: GCAGAAGGTTGGGAGACCCAATCTGCAGTTGCAGAT...TGCACAGCACCTGCATGCTGCCCTGGGGCGGTGTGTTAGTGTCCGGAGTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006562.6 ENSMUST00000194248.2 |
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| CDS CCA 72 bp | CGCAGTCCCGCAGTCTGCGCCGCGCTCGCCAGCGCCTaGGGGGACTCGGTGTACGGCCAGGCCACCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSPAVCAALASA*GDSVYGQATSA Trigger: GGCCGAGGTGGCCTGGCCGTACACCGAGTCCCCCCAGGCGCTGGCGAGCGCGGCGCAGACTGCGGGACTGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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| CDS GCA 72 bp | ACCTCGGCCGCTTCGAAGCCCGCACGGCCCGCGGCGTaGAGCCGCTCGGGGAGCCCGGGGAGCTCTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: TSAASKPARPAA*SRSGSPGSSGN Trigger: GTTTCCAGAGCTCCCCGGGCTCCCCGAGCGGCTGCACGCCGCGGGCCGTGCGGGCTTCGAAGCGGCCGAGGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006562.6 ENSMUST00000106393.8 ENSMUST00000194248.2 |
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