RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HYDIN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059854

Ensembl transcript IDs: ENSMUST00000043141.7

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCATGGCTCATAGGCTaGGTGGAAGGCCGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAWLIG*VEGRQL
Trigger: CAACTGGCGGCCTTCCACTCAGCCTATGAGCCATGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCGTGGCTCCAGGCCTTaGCCCTGGGCCAGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRGSRP*PWARSV
Trigger: GACACTTCTGGCCCAGGGTCAAGGCCTGGAGCCACG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGTGGCTCCTCCTTTaGCGCAGGGCCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGWLLL*RRACFG
Trigger: CCCAAAGCAGGCCCTGCGGCAAAGGAGGAGCCACCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCCTGGAGGCAGAGGTaGATGGTTGGCCCTCCGTAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAWRQR*MVGPPY
Trigger: GTACGGAGGGCCAACCATTCACCTCTGCCTCCAGGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGGGTCTGTGGTCTTaGCCACCAGCAGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGGLWS*PPAGRG
Trigger: TCCCCTTCCTGCTGGTGGGCAAGACCACAGACCCCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGAAGGCGCCTGGCGCTaGTCGTCAGCCTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGEGAWR*SSASCD
Trigger: GTCACATGAGGCTGACGACCAGCGCCAGGCGCCTTC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGACGGGAGGAGGGATaGGTGGTCCTGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRREEG*VVLRTP
Trigger: TGGGGTCCTCAGGACCACCCATCCCTCCTCCCGTCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCTGGGCACGGATGGTaGCACTGTTGGGAGAGATGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPGHGW*HCWERW
Trigger: CCATCTCTCCCAACAGTGGCACCATCCGTGCCCAGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATACAGTGTGTGGGGCTaGCAGAGAGCTGGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYSVWG*QRAGGD
Trigger: GTCACCGCCAGCTCTCTGGCAGCCCCACACACTGTA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGTTTCTCGGGAGGTaGAGGCAAGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGFLGR*RQGLQS
Trigger: GCTCTGAAGGCCTTGCCTGCACCTCCCGAGAAACCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCAGGGGCTACCTTGTaGCCGATGTCTTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPGATL*PMSLGL
Trigger: CAGCCCCAAAGACATCGGCCACAAGGTAGCCCCTGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGGGAAAGTCCAGGATaGCTCGAGCCCCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRESPG*LEPLWL
Trigger: AAGCCAGAGGGGCTCGAGCCATCCTGGACTTTCCCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTCCGCCTTGCCTTTaGGGAGCATCACACTCCCGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCPPCL*GASHSR
Trigger: GCGGGAGTGTGATGCTCCCCAAAGGCAAGGCGGACA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCCTTTAGCAGGCAGTaGAGGGCAGAGGGCGCATTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAFSRQ*RAEGAF
Trigger: GAATGCGCCCTCTGCCCTCCACTGCCTGCTAAAGGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACAAGACCTCGGCTCCTaGCAATGTTGCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGQDLGS*QCCWAG
Trigger: GCCTGCCCAGCAACATTGCCAGGAGCCGAGGTCTTG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGTCCACATGCAGCTaGGCGGGGATGGTGCCGTTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRSTCS*AGMVPL
Trigger: TAACGGCACCATCCCCGCCCAGCTGCATGTGGACCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCATTCCTTCTCCTCTaGTTCGGAGGGGCAAGCGGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPFLLL*FGGASG
Trigger: TCCGCTTGCCCCTCCGAATCAGAGGAGAAGGAATGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGCGGACACGCAGTTTaGAGGTCATGGGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRGHAV*RSWGPK
Trigger: CTTTGGTCCCCATGACCTTCAAACTGCGTGTCCGCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGGCTGTCTTTCCTaGCAAGGGCGTCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGIGCLS*QGRPVD
Trigger: GTCCACGGGACGCCCTTGTCAGGAAAGACAGCCAAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTGACGAAGGCATGTaGGCGGCTCCCGATGCACAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCDEGM*AAPDAH
Trigger: ATGTGCATCGGGAGCCGCTCACATGCCTTCGTCACA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCTGACAACAGCCACTaGGGAGGAAGAGAGGACGCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPDNSH*GGREDA
Trigger: TGCGTCCTCTCTTCCTCCTCAGTGGCTGTTGTCAGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCTCTGTGCCTGAGATaGTGTAGCCTTCTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPLCLR*CSLLRG
Trigger: GCCCCGAAGAAGGCTACATCATCTCAGGCACAGAGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGAAGACTTCCACGCTaGCTTCAGTGCCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRRLPR*LQCHPG
Trigger: CCCAGGGTGGCACTGAAGTCAGCGTGGAAGTCTTCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTGGCCATCTTCCGATaGATGGCCCCCATGGACTCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLAIFR*MAPMDS
Trigger: GGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGTGGCTGTCCGCCTTaGCTTTGGGGAGCATCACAC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSGCPP*LWGASH
Trigger: GTGTGATGCTCCCCAAAGGCAAGGCGGACAGCCACT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCCTCTCCAGCTCCTaGTGCAGCTTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCLSSS*CSFFSC
Trigger: GCAGGAGAAGAAGCTGCAGCAGGAGCTGGAGAGGCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGCTCCTGGCAATGTTaGTGGGCAGGCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGSWQC*WAGHPK
Trigger: CTTTGGATGGCCTGCCCAGCAACATTGCCAGGAGCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACAGCCAGGGTGGAGATaGCCAATCTGTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGQPGWR*PICGEK
Trigger: CTTCTCCCCACAGATTGGGCATCTCCACCCTGGCTG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGTTCGGCAGTCCCGTaGAGGGCATATAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSSAVP*RAYSQP
Trigger: TGGCTGGCTATATGCCCTGCACGGGACTGCCGAACT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGCAGTAAAGCCCTaGGCACGGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGMAVKP*ARMVPL
Trigger: CAGTGGCACCATCCGTGCCCAGGGCTTTACTGCCAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTTCCCGTTATCTGTaGGTTCCTGGGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSRYL*VPGRPW
Trigger: CCAAGGCCTCCCAGGAACCCACAGATAACGGGAACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCGGTCTCCTCCTCTaGGAGTTCCTCAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSGLLL*EFLSHH
Trigger: GTGATGGCTGAGGAACTCCCAGAGGAGGAGACCGCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGAGGCAGAGGTGAATaGTTGGCCCTCCGTACACCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGGRGE*LALRTP
Trigger: AGGTGTACGGAGGGCCAACCATTCACCTCTGCCTCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCCCATACTCTCCCTTaGGTAGCATGGTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAHTLP*VAWCPA
Trigger: TGCAGGGCACCATGCTACCCAAGGGAGAGTATGGGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTTCTACCACCGAGTaGGCTGGCTCAGGGTCCATC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSSTTE*AGSGSI
Trigger: GATGGACCCTGAGCCAGCCCACTCGGTGGTAGAAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGCAGCACAGGGGGTaGATTCTCATACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEQHRG*ILIQLR
Trigger: CCTCAGCTGTATGAGAATTCACCCCCTGTGCTGCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACACCAGCTTCTCTTTaGCTTTCTTGGGCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTPASL*LSWAWR
Trigger: CCGCCACGCCCAAGAAAGTCAAAGAGAAGCTGGTGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACAGCCAGGATCTGAATaGGGAGGTCATCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGQPGSE*GGHLGA
Trigger: TGCTCCCAGATGACCTCCTCATTCAGATCCTGGCTG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCCGAGGGTAAAAGGTaGTTGGGATCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPEGKR*LGSPGS
Trigger: AGACCCTGGAGATCCCAATCACCTTTTACCCTCGGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGCAAGGCTGTTGTTaGCGAGGGAGACTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGQGCC*RGRLFS
Trigger: GGAAAACAGTCTCCCTCGTCAACAACAGCCTTGCCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGTTCCAGACAGGGTaGGGCACAGAGGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRFQTG*GTEDFL
Trigger: GAGGAAATCCTCTGTGCCTCACCCTGTCTGGAACCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAACTTGATGGAGGCTaGTACACTCTGGCGGACTGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQLDGG*YTLADW
Trigger: CCAGTCCGCCAGAGTGTATCAGCCTCCATCAAGTTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCTTGGGTAGCATGGTaGCCTGCATCATGGACACAG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPWVAW*PASWTQ
Trigger: CTGTGTCCATGATGCAGGGCACCATGCTACCCAAGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCAGGAGGATGGTGGTaGCCATCCTGTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSGGWW*PSCLCT
Trigger: AGTGCAGAGACAGGATGGGCACCACCATCCTCCTGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTATCTGTGGGTTCCTaGGAGGCCTTGGACTGGCGA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLSVGS*EALDWR
Trigger: TCGCCAGTCCAAGGCCTCCCAGGAACCCACAGATAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATACTCTACAGTGTGTaGGGCTGCCAGAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGILYSV*GCQRAG
Trigger: GCCAGCTCTCTGGCAGCCCCACACACTGTAGAGTAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTCTCTGCAGATGTATaGGTAGGTGCAGACTCCGCG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVSADV*VGADSA
Trigger: CGCGGAGTCTGCACCTACCCATACATCTGCAGAGAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACAGGTTTGGAGGGCTaGAAGTGCACTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTGLEG*KCTCSP
Trigger: TGGGCTGCAAGTGCACTTCCAGCCCTCCAAACCTGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTGGCAGCGCAGGATaGGCTGGCAATCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSGSAG*AGNRSS
Trigger: TGAAGATCGATTGCCAGCCCATCCTGCGCTGCCAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTTGGCTCAATAATCTaGCAGCGCAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVGSII*QRRMGW
Trigger: CCAGCCCATCCTGCGCTGCCAGATTATTGAGCCAAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATACCACCGAGTGGGCTaGCTCAGGGTCCATCTCTAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYHRVG*LRVHLY
Trigger: ATAGAGATGGACCCTGAGCCAGCCCACTCGGTGGTA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTCAGGAGGATGGTaGTGCCCATCCTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGMSGGW*CPSCLC
Trigger: GCAGAGACAGGATGGGCACCACCATCCTCCTGACAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGATGTCAGGAGGATaGTGGTGCCCATCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWMSGG*WCPSCL
Trigger: GAGACAGGATGGGCACCACCATCCTCCTGACATCCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGTTTGAGAGCAGGATaGTCTGTGTGTGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGLRAG*SVCAWS
Trigger: GCTCCAGGCACACACAGACCATCCTGCTCTCAAACC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCCACCCTGGGCTCCTaGGGCTGCGTTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGATLGS*GCVNNF
Trigger: AAAGTTATTAACGCAGCCCCAGGAGCCCAGGGTGGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGACCTTGGGGTTTaGGGGGCAGAGCAATTCCAA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRDLGV*GAEQFQ
Trigger: TTGGAATTGCTCTGCCCCCCAAACCCCAAGGTCCCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGCTGGAACAAGGCCTaGTCCAAGTCAACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGWNKA*SKSTLE
Trigger: TTCCAGAGTTGACTTGGATCAGGCCTTGTTCCAGCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCGAACACCACGCCTCTaGAACAGTTGCTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRTPRL*NSCSAV
Trigger: TACAGCTGAGCAACTGTTTCAGAGGCGTGGTGTTCG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAGGCATGGCAAAACTaGCTGCCTTGGAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQAWQN*LPWRLL
Trigger: AAGAAGCCTCCAAGGCAGTCAGTTTTGCCATGCCTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTGATACGGTTGGAATaGCAGGTTGGCCGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLIRLE*QVGRFR
Trigger: TCTGAACCGGCCAACCTGTCATTCCAACCGTATCAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGTGCCCTTCCCTTTaGTCTCCACTGTCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLCPSL*SPLSVE
Trigger: CTCAACAGACAGTGGAGATCAAAGGGAAGGGCACAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGAGAACAGGACCGAGTaGTTAAAGGTGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGENRTE*LKVSWA
Trigger: TGCCCAGCTCACCTTTAATCACTCGGTCCTGTTCTC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGCCACCTCTGTGCCTaGGATGATGTAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSHLCA*DDVAFF
Trigger: GAAGAAGGCTACATCATCTCAGGCACAGAGGTGGCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGGTTGGAACGGTTTaGGAGCAGGATGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLVGTV*EQDGLC
Trigger: ACACAGACCATCCTGCTCTCAAACCGTTCCAACCAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAAGGCCCTTCAGGGTaGCACTTAGGTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQGPSG*HLGLSS
Trigger: AGAAGACAGACCTAAGTGTCACCCTGAAGGGCCTTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGGGTTCTCCAACTTaGTGGAGGCTGATACACTCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGGSPT*WRLIHS
Trigger: AGAGTGTATCAGCCTCCATCAAGTTGGAGAACCCCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGTTGTATCCGGCTCTaGTTAGGAAGGGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGCCIRL*LGRDLG
Trigger: CCCAAGGTCCCTTCCTAATCAGAGCCGGATACAACA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTTCCTTCTTGCTCTaGTTTTCCTTGGGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSFLL*FSLGRK
Trigger: CTTCCGCCCCAAGGAAAAGCAGAGCAAGAAGGAACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACGATATCTGATGGCTaGTGTAGGGCCGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTISDG*CRAAEL
Trigger: GAGTTCTGCGGCCCTACAGCAGCCATCAGATATCGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACGCTCCTTCTCCTTTaGCAGGGCTTCCTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTLLLL*QGFLAF
Trigger: AAACGCAAGGAAGCCCTGGCAAAGGAGAAGGAGCGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCAACTGCAGCAAGCTaGTTGTTTGTGGCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGATAAS*LFVAPC
Trigger: ACAAGGCGCCACAAACAAGCAGCTTGCTGCAGTTGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGGAGGGCTGGAAGTaGACTTGCAGCCCATACTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLEGWK*TCSPYS
Trigger: AGAGTATGGGCTGCAAGTGCACTTCCAGCCCTCCAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGTGCCCTGGTGCTTaGGATTCTCCAGATTCATGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGECPGA*DSPDSW
Trigger: CCATGAATCTGGAGAATCGCAAGCACCAGGGCACTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTAAGATGCTCTGGCTaGTGCCAAGAACGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLRCSG*CQERSG
Trigger: TCCAGACCGTTCTTGGCAGCAGCCAGAGCATCTTAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCACCTTCGGGCTCATaGGTGGTAAGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPPSGS*VVRLCS
Trigger: AGAGCAAAGTCTTACCACCCATGAGCCCGAAGGTGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGATGCTGCCCTTGTTaGACAGGATTGCCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRCCPC*TGLPRN
Trigger: GTTACGAGGCAATCCTGTCCAACAAGGGCAGCATCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCTGTAGTCACCAACTaGAGCTTGGGGACCACACAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSVVTN*SLGTTH
Trigger: GTGTGTGGTCCCCAAGCTCCAGTTGGTGACTACAGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGCAGTCAGTGTCAGTaGGATGTCATCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSQCQ*DVIFCR
Trigger: CCTGCAGAAGATGACATCCCACTGACACTGACTGCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTAGTACTTCATAGGTaGGCCCTCCTTCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVVLHR*ALLPPH
Trigger: GTGAGGTGGAAGGAGGGCCCACCTATGAAGTACTAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTCCAGGATGTACTCTaGCAGCTGGACTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVQDVL*QLDFGE
Trigger: CTCACCAAAGTCCAGCTGCCAGAGTACATCCTGGAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACCTGTTTCTCTGCGTaGAAGGACACAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTCFSA*KDTGKW
Trigger: CCACTTCCCTGTGTCCTTCCACGCAGAGAAACAGGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCAGAGGTGAATGGTTaGCCCTCCGTACACCTTGAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGAEVNG*PSVHLD
Trigger: ATCAAGGTGTACGGAGGGCCAACCATTCACCTCTGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCCTCGTCCAGTGTCTaGAGACGCTCCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSSSSV*RRSFSF
Trigger: AAAGGAGAAGGAGCGTCTCCAGACACTGGACGAGGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGATGTGGTACAGGTTaGGGCTGGTGCAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGCGTG*GWCRSD
Trigger: ATCAGATCTGCACCAGCCCCAACCTGTACCACATCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTCTGCATGGTCTGTaGTGTGAACAGCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGLHGL*CEQHCD
Trigger: GTCACAGTGCTGTTCACACCACAGACCATGCAGACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGCTTCCTGGAGCTCTaGAATAGAGAACAGGACCGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGFLEL*NREQDR
Trigger: TCGGTCCTGTTCTCTATTCCAGAGCTCCAGGAAGCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATATTGGCAACAGCTTTaGGGAGTTCGGCAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYWQQL*GVRQSR
Trigger: ACGGGACTGCCGAACTCCCCAAAGCTGTTGCCAATA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCGGATGCTGAAGGCTaGGTTCTCCACAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPDAEG*VLHNEG
Trigger: TCCTTCATTGTGGAGAACCCAGCCTTCAGCATCCGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCATTGCTTGCTGTCTaGCTCCTGAGAGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPLLAV*LLRVTW
Trigger: CCAAGTTACTCTCAGGAGTCAGACAGCAAGCAATGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTTGAGTGGGATGTATaGAGATCACGGGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFEWDV*RSRGLL
Trigger: GAGAAGGCCCCGTGATCTTCATACATCCCACTCAAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCACAGGCAGGGTGGTaGTGTTCTTTATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSQAGW*CSLSPR
Trigger: CCTTGGTGATAAAGAACATCACCACCCTGCCTGTGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTGCAAACCTGATCTaGTTTTCCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGANLI*FSSSST
Trigger: GGTGGATGAGGAGGAAAATCAGATCAGGTTTGCACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTGTAGGTCAAGGCTaGTTCGTGGAAAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCVGQG*FVERCP
Trigger: AGGGCATCTTTCCACGAATCAGCCTTGACCTACACA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGAAGTGTCAGCTTCTaGGAGCTCTGGCCAATTTGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRSVSF*ELWPIW
Trigger: CCAAATTGGCCAGAGCTCTCAGAAGCTGACACTTCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTCATTGAAGACTCATaGGCTGACTCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVIEDS*ADSSAS
Trigger: GGAAGCAGAGGAGTCAGCTCATGAGTCTTCAATGAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGCTGGGTAAGAGATaGTGGAGAACAAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLLGKR*WRTRRE
Trigger: CTCCCGTCTTGTTCTCCATCATCTCTTACCCAGCAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGTCGTTTTTCCTTCTaGGTTTCCCGCACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRRFSF*VSRTCS
Trigger: AGAGCAAGTGCGGGAAACTCAGAAGGAAAAACGACG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAAAACACTCAATGGTaGTCACCTGCTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQNTQW*SPAVLQ
Trigger: CTGGAGGACAGCAGGTGATCACCATTGAGTGTTTTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGTCCAGAAAGAGCATaGTGTCTCCTTGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGPERA*CLLGPV
Trigger: AACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCGAACCCGAAATACTaGAGGGATGAAGGACTGGTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGANPKY*RDEGLV
Trigger: AACCAGTCCTTCATCCCTGCAGTATTTCGGGTTCGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGGATGTCATCTTCTaGAGGAACTGCACCCTCACT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWDVIF*RNCTLT
Trigger: AGTGAGGGTGCAGTTCCTGCAGAAGATGACATCCCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGGTGTTATTGGAGATaGTTCTCTGGTGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRCYWR*FSGVPG
Trigger: CCCTGGAACACCAGAGAAGCATCTCCAATAACACCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGACCTGTTTCTCTaGGTGGAAGGACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGKDLFL*VEGHRE
Trigger: TTCCCTGTGTCCTTCCACGCAGAGAAACAGGTCCTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTAGCATGGTGCCCTaGATCATGGACACAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSMVP*IMDTVK
Trigger: CTTTACTGTGTCCATGATGCAGGGCACCATGCTACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTCGGGTTCTTCCATaGCTCATGTGGCTGGTTATC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSRVLP*LMWLVI
Trigger: GATAACCAGCCACATGAGGCATGGAAGAACCCGAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCTCCCCACAGGGTCTaGAAAACACTCAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPPHRV*KTLNGD
Trigger: ATCACCATTGAGTGTTTTGCAGACCCTGTGGGGAGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGGTCCAGAGAGCTCTaGCTGGTAGCTGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGWSREL*LVAEVE
Trigger: TTCAACTTCAGCTACCAGGCAGAGCTCTCTGGACCA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTGGGAAAAAGAGAGTaGCCTGGTGCTTGCGATTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVGKRE*PGACDS
Trigger: AGAATCGCAAGCACCAGGGCACTCTCTTTTTCCCAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTTCACAGGGCAAGTaGAGAAATTCAGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTSQGK*RNSARR
Trigger: CCGACGAGCTGAATTTCTCCACTTGCCCTGTGAAGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCAGCAGAACCTTCTaGGTGTTGTACTTCACAGGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTSRTF*VLYFTG
Trigger: CCCTGTGAAGTACAACACCCAGAAGGTTCTGCTGGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTTCCTCTTCTTCGGTaGCAAACACCTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLPLLR*QTPSTG
Trigger: TCCAGTGGAAGGTGTTTGCCACCGAAGAAGAGGAAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGCATGCTGTCTCCTTaGACCAGTTTCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSMLSP*TSFLWF
Trigger: GAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGAGCTGGAGAATTCTaGAGGTGTCCTTCAGGACGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRAGEF*RCPSGR
Trigger: ACGTCCTGAAGGACACCTCCAGAATTCTCCAGCTCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGACTGGTTAGAGAGCTaGAGAATTCTGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGDWLES*RILEVS
Trigger: GGACACCTCCAGAATTCTCCAGCTCTCTAACCAGTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGAGCTCTGGCCAATTTaGAACAACAGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGELWPI*NNRDWL
Trigger: CAGCCAGTCTCTGTTGTTCCAAATTGGCCAGAGCTC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTAATCATAGACTTCTaGTGGCAGCTTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVIIDF*WQLLPW
Trigger: CCAGGGGAGAAGCTGCCACCAGAAGTCTATGATTAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGCTTCTAAGACGATaGAGTCAATGTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGLLRR*SQCSGR
Trigger: CCTGCCTGAACATTGACTCCATCGTCTTAGAAGCCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTGGGTATTCGGTCATaGCTTTCTTCTTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVGIRS*LSSSWW
Trigger: CCACCAGGAAGAAGAAAGCCATGACCGAATACCCAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGATCTGGTCTCCTTTaGGAAGCTTGTCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSGLL*EACHSP
Trigger: TGGAGAGTGACAAGCTTCCCAAAGGAGACCAGATCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGATGTCCAGGATCTaGTCTCCTTTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRMSRI*SPLGSL
Trigger: CAAGCTTCCCAAAGGAGACCAGATCCTGGACATCCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGAGGCCTTTCCTGCTaGAGTAAGTGCGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGGLSC*SKCVVF
Trigger: AAAAACGACGCACTTACTCCAGCAGGAAAGGCCTCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTCCACCTCAATTTCTaGGCGAATTCCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLHLNF*ANSLAA
Trigger: AGCTGCCAAGGAATTCGCCCAGAAATTGAGGTGGAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCAGGGAGGCCGTGTaGGCTTTCTTGACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTREAV*AFLTFS
Trigger: TGAAAAAGTCAAGAAAGCCCACACGGCCTCCCTGGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTCCAAGTGGGAGGTTaGGAATTTGGCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLQVGG*EFGSTR
Trigger: CCTTGTACTGCCAAATTCCCAACCTCCCACTTGGAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTGCAACAGGAGTTTTaGTCCAGAGAGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLQQEF*SRELCL
Trigger: CAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGTAAAAGGTGATTaGGATCTCCAGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRVKGD*DLQGLP
Trigger: GGGAAGACCCTGGAGATCCCAATCACCTTTTACCCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTCATGGTGATCGTGTaGAAGGGCTCCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFMVIV*KGSKVM
Trigger: CATCACCTTGGAGCCCTTCCACACGATCACCATGAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAAGGGAAGATGCTCTTaGTCCAGGGAAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGKGRCS*SREISR
Trigger: CCTGGAGATTTCCCTGGACCAAGAGCATCTTCCCTT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTTGCTAAGATGCTCTaGCTGCTGCCAAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFAKML*LLPRTV
Trigger: GACCGTTCTTGGCAGCAGCCAGAGCATCTTAGCAAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTCACCCAGATGGCTaGGCTCAAAGAAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSHPDG*AQRRLP
Trigger: TGGAAGTCTTCTTTGAGCCCAGCCATCTGGGTGAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTTGCTCTGCAGTCCTaGGATCACTTTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFALQS*DHFGHL
Trigger: AAGATGGCCAAAGTGATCTCAGGACTGCAGAGCAAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTTCCATCTGGACATaGGCACTTATTTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTSIWT*ALISAV
Trigger: GACCGCTGAAATAAGTGCTCATGTCCAGATGGAAGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTTTGGCTTCAATTGTaGGATGCCGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFWLQL*DAALPG
Trigger: ACCTGGAAGAGCGGCATCTCACAATTGAAGCCAAAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGCTTTGGGCCTTTTaGCCTTCCGTTTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLLWAF*PSVLAH
Trigger: ATGAGCTAAAACGGAAGGTCAAAAGGCCCAAAGCAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTTGAGGAAGATGTCTaGATCTCCTTCCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVEEDV*ISFRVF
Trigger: AAAGACCCGGAAGGAGATTCAGACATCTTCCTCAAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACAATCCACCGGAAGTaGTTCAGCCTGATGAACTTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTIHRK*FSLMNF
Trigger: GAAGTTCATCAGGCTGAATCACTTCCGGTGGATTGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTTTCAGAGTCATGTTaGCCGGCTCTAGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVSESC*PALESR
Trigger: CCTACTTTCTAGAGCCGGTCAACATGACTCTGAAAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCTTTACCTCCTCCATaGCCCTCAAAGTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGALPPP*PSKSQN
Trigger: ATTTTGGGACTTTGAGGGTCATGGAGGAGGTAAAGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGTCTACAGGGAGCTaGAACATGATCTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWSTGS*NMILES
Trigger: GCTTTCCAAGATCATGTTTCAGCTCCCTGTAGACCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCGGGTTCAGAATTGTaGAGGTCTGGACATTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSGSEL*RSGHSS
Trigger: GGAAGAATGTCCAGACCTTCACAATTCTGAACCCGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGGTGGTAAGACTTTaGTCTGCAGTCCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWVVRL*SAVLRS
Trigger: TGATCTCAGGACTGCAGAGCAAAGTCTTACCACCCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACTATGGATCGATGTaGGCCAATGACCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGNYGSM*ANDLCL
Trigger: GAGACACAGGTCATTGGCGCACATCGATCCATAGTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGATGTCCTCTTTGTaGTGGTGGTTCCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLMSSL*WWFLGQ
Trigger: CTGACCAAGGAACCACCAGCACAAAGAGGACATCAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTGCCAGGGCTTCCTTaGGTTTGTTCTCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLPGLP*VCSLLA
Trigger: AGCAAGAAGAGAACAAACGCAAGGAAGCCCTGGCAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCAGCTTCTTCTCCTaGATCTCCTTGGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCSFFS*ISLASL
Trigger: AAGACTTGCCAAGGAGATGCAGGAGAAGAAGCTGCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCCTGCTGGAGTAAGTaGGTCGTTTTTCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSCWSK*VVFPSE
Trigger: CTCAGAAGGAAAAACGACGCACTTACTCCAGCAGGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAAAGGCTGGCAGACATaGTTCAGCAAGCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGKGWQT*FSKQSV
Trigger: TACACTCTGCTTGCTGAAGCATGTCTGCCAGCCTTT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTGGGCTCCTGGGGCTaGGTTAATAACTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLGSWG*VNNFFC
Trigger: ACAGAAAAAGTTATTAACGCAGCCCCAGGAGCCCAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGTACTCTGGCAGCTaGACTTTGGTGAGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMYSGS*TLVSFR
Trigger: CCGAAAACTCACCAAAGTCCAGCTGCCAGAGTACAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCAAGATGCCAGAAGTaGGTTGGATCTCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPRCQK*VGSQRS
Trigger: GGATCTTTGAGATCCAACCCACTTCTGGCATCTTGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGTTCTCCATGTACTTaGCCTTCATGTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGSPCT*PSCAPL
Trigger: AAGAGGAGCACATGAAGGCCAAGTACATGGAGAACC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCCTCTTTGTGCTGGTaGTTCCTTGGTCAGACGTAT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSSLCW*FLGQTY
Trigger: ATACGTCTGACCAAGGAACCACCAGCACAAAGAGGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCGAAGTCTGGAGACTaGATGTTGATAAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSKSGD*MLIKGT
Trigger: GGTGCCCTTTATCAACATCCAGTCTCCAGACTTCGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTTGCTTCCCTTAGGTaGAGAGGGTTGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFASLR*RGLFLL
Trigger: CAAGAGGAACAACCCTCTCCACCTAAGGGAAGCAAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGAATCACATTCACTTaGCTGTGGTTGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRITFT*LWLVMV
Trigger: CACCATCACCAACCACAGCCAAGTGAATGTGATTCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAAGAAAATATCAACTaGGAACCTGGACAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEENIN*EPGQWR
Trigger: CCGCCACTGTCCAGGTTCCCAGTTGATATTTTCTTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGCTAATGGAGAAGTaGGGCTTGAGTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGLMEK*GLSFLT
Trigger: TGTCAAGAAACTCAAGCCCCACTTCTCCATTAGCCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCTATCTCAGTGGGGTaGTATGTTACTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPISVG*YVTSRA
Trigger: GGCTCTAGAAGTAACATACCACCCCACTGAGATAGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTAGTCTCACCCAGATaGCTGGGCTCAAAGAAGACT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLVSPR*LGSKKT
Trigger: AGTCTTCTTTGAGCCCAGCCATCTGGGTGAGACTAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAAGGTCATCATGATTaGCAAGCTGGATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEGHHD*QAGWSS
Trigger: AGAAGACCATCCAGCTTGTCAATCATGATGACCTTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTGTTGCGTGCTCTCTaGCAGAAACTTTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVLRAL*QKLSFL
Trigger: TAGAAAGGAAAGTTTCTGTCAGAGAGCACGCAACAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCGGTCCCAATACATaGGGATGTTTTGAACATCCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCGPNT*GCFEHP
Trigger: AGGATGTTCAAAACATCCTCATGTATTGGGACCGCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTCACTTTGAGCTTTTaGGTCTTTCCTACGGGCACA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFTLSF*VFPTGT
Trigger: TGTGCCCGTAGGAAAGACTCAAAAGCTCAAAGTGAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGCTGGAATTCAAATaGGAATGTTCCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGLEFK*ECSLRV
Trigger: AACTCTGAGGGAACATTCTCATTTGAATTCCAGCCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCATGCTGGTTTCCTaGTTTTCCTCCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGIMLVS*FSSLFR
Trigger: CCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATCACAAACACAAAGTaGTTTAGGATCTCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGITNTK*FRISVA
Trigger: CGCCACGGAGATCCTAAAGCACTTTGTGTTTGTGAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGTCTGGTCATAGTTaGCAACATCTAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTSGHS*QHLERR
Trigger: TCTCCTCTCTAGATGTTGGCAACTATGACCAGACGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGGAAACAGAAGTATaGCTCTACCACCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLETEV*LYHHWR
Trigger: TCTCCAATGGTGGTAGAGGCATACTTCTGTTTCCAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTGGCCATTTTAGTTaGTCCAGGCTTGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLGHFS*SRLVEA
Trigger: AGCTTCTACAAGCCTGGAGCAACTAAAATGGCCAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGCGAGTTTTGAGGTaGAACATGGAGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLRVLR*NMESLL
Trigger: CAACAAAGACTCCATGTTCCACCTCAAAACTCGCAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTCAAGGATCATGCTaGTTTCCTGCTTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLQGSC*FPAFPP
Trigger: AGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGAGAGCTGGATGATTaGAGCTATAAACTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGELDD*SYKLAD
Trigger: ATCTGCGAGTTTATAGCTCCAATCATCCAGCTCTCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCACGTTCTGTGACATaGTCAAACAGCTGCAATCCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSRSVT*SNSCNP
Trigger: TGGATTGCAGCTGTTTGACCATGTCACAGAACGTGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGTCCTCGGTGTTATTaGAGATGCTTCTCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGCPRCY*RCFSGV
Trigger: AACACCAGAGAAGCATCTCCAATAACACCGAGGACA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTGCTGGTGGTTCCTTaGTCAGACGTATTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVLVVP*SDVFIS
Trigger: AGAAATGAATACGTCTGACCAAGGAACCACCAGCAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCCCTAGGATGTTGTTaGTGTCTGATAGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSLGCC*CLIGLL
Trigger: TAGAAGCCCTATCAGACACCAACAACATCCTAGGGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGCCTCTACCACCATTaGAGAATCATTCAGGATCGT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGCLYHH*RIIQDR
Trigger: ACGATCCTGAATGATTCTCCAATGGTGGTAGAGGCA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCACTGATAAGTGGATaGTGCCTGTCATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSLISG*CLSFSQ
Trigger: TTGGGAGAATGACAGGCACCATCCACTTATCAGTGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCTTCCCTATCTCAGTaGGGTGGTATGTTACTTCTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPSLSQ*GGMLLL
Trigger: TAGAAGTAACATACCACCCCACTGAGATAGGGAAGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGTGAGCAGATCCAATaGAAACTTTGCCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSEQIQ*KLCQCP
Trigger: TGGACATTGGCAAAGTTTTCATTGGATCTGCTCACT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGTCTTTCTTCCTCTaGGAAAACACAACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMSFFL*ENTTLG
Trigger: CCCCAAAGTTGTGTTTTCTCAGAGGAAGAAAGACAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTAGAGGGCATATTTaGAGTCGATTATGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCRGHI*SRLCLG
Trigger: ACCAAGGCATAATCGACTTCAAATATGCCCTCTACA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTGGTTATCTTCTTTTaGAGAATTGGACTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLVIFF*RIGLSP
Trigger: AGGGGAGAGTCCAATTCTTCAAAAGAAGATAACCAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTTCTGGACTGTGTCTaGGAACTTGGCCATTTTAGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFLDCV*ELGHFS
Trigger: ACTAAAATGGCCAAGTTCTCAGACACAGTCCAGAAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTTTATTTTCCTCCATaGTGTAGATGTAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVYFPP*CRCRRW
Trigger: CCACCTCCTACATCTACATCATGGAGGAAAATAAAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACATCTTCTTCAGGGTaGTGGGTGATTCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTSSSG*WVILIS
Trigger: TGAAATCAGAATCACCCATCACCCTGAAGAAGATGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCGAGAACTTCACTTTaGGCTTTTGAGTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGARTSL*AFESFL
Trigger: TAGGAAAGACTCAAAAGCTCAAAGTGAAGTTCTCGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGCTGAAATTGAGGTaGGACTTGTCAAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGELKLR*DLSREI
Trigger: TATCTCTCTTGACAAGTCTCACCTCAATTTCAGCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACCGGGTATAATTGGTaGACTTTGCTAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTGYNW*TLLRCS
Trigger: AGAGCATCTTAGCAAAGTTCACCAATTATACCCGGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGATTTCTTGTTTaGCATGCGAACCCGAAATAC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGKGFLV*HANPKY
Trigger: GTATTTCGGGTTCGCATGGCAAACAAGAAATCCCTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGCTTCATACATGGTaGAAACCTGATCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGLHTW*KPDLIF
Trigger: GAAAATCAGATCAGGTTTGCACCATGTATGAAGCCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCGTTTGTTCTCTTCTTaGTCCTTTTTAGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRLFSS*SFLAFS
Trigger: GGAGAAGGCTAAAAAGGAGCAAGAAGAGAACAAACG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTCTATCTTGGCAACTaGAGCAAGCTGCTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFYLGN*SKLLVC
Trigger: ACAAACAAGCAGCTTGCTGCAGTTGCCAAGATAGAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTTCAAGTGTTGCGTaGTCTCTGACAGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSSSVA*SLTETF
Trigger: GAAAGTTTCTGTCAGAGAGCACGCAACACTTGAAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGACTGAGATATTATaGTCTGGGATAGAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGTEIL*SGIEKV
Trigger: GACTTTCTCTATCCCAGAGCATAATATCTCAGTCCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTGAAGTCCAAGTATTaGAACAGGAGTTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVKSKY*NRSFGP
Trigger: TGGACCAAAACTCCTGTTGCAATACTTGGACTTCAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATACTTTTCATTGCCTTaGAGGTTCCTGTGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYFSLP*RFLCRS
Trigger: TGACCTACACAGGAACCTCCAAGGCAATGAAAAGTA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTTCTTCTTCCTGGTaGTTTCTTCAAGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLSSSW*FLQVLR
Trigger: ACGCAACACTTGAAGAAACCACCAGGAAGAAGAAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGAAAACACAACTTTaGGGTCTCTGCAGATGTATG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEKTQL*GLCRCM
Trigger: CATACATCTGCAGAGACCCCAAAGTTGTGTTTTCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTGGGCGAATTCCTTaGCAGCTTAACTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSGRIP*QLNLKM
Trigger: CATCTTTAAGTTAAGCTGCCAAGGAATTCGCCCAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGAATGTTGGGCCATaGCTGATCTTGATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTNVGP*LILILS
Trigger: ACTCAAAATCAAGATCAGCCATGGCCCAACATTCGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCCAGCTTTCAGGGGCTaGAATTCAAATGAGAATGTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGPAFRG*NSNENV
Trigger: AACATTCTCATTTGAATTCCAGCCCCTGAAAGCTGG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCATCTTGTCGGTTTaGAATGTTAGTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCILSV*NVSFSR
Trigger: CCTGGAAAAACTAACATTTCAAACCGACAAGATGCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGTTTCACACTGATATaGAGCAAAATCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCFTLI*SKIHIG
Trigger: GCCAATGTGGATTTTGCTTCATATCAGTGTGAAACA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGATAATAAACCCATTTaGTTCCAGATTCGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGDNKPI*FQIRCL
Trigger: AAGGCACCGAATCTGGAATCAAATGGGTTTATTATC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTTCATACTTTTCATTaGCTTGGAGGTTCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVHTFH*LGGSCV
Trigger: TACACAGGAACCTCCAAGGCAATGAAAAGTATGAAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTGCTTTTATGTCATaGTGGAAACAGAAGTATGCC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLAFMS*WKQKYA
Trigger: GGCATACTTCTGTTTCCAGCATGACATAAAAGCAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCTCTAGAAAGTAGGTaGTTGCTTTTATGTCATGCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGALESR*LLLCHA
Trigger: AGCATGACATAAAAGCAAGCACCTACTTTCTAGAGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCATACGTTTAGTGCCTaGTTTTCATTGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGHTFSA*FSLGFR
Trigger: TCTGAAACCCAATGAAAAGCAGGCACTAAACGTATG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGAAGCTTGTTGCATaGAAGAAGACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEKLVA*KKTFLK
Trigger: CTTCAAGAATGTCTTCTTGCATGCAACAAGCTTCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGAAGGAGAAGCTTGTTaGATGCAAGAAGACATTCTT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGEGEAC*MQEDIL
Trigger: AAGAATGTCTTCTTGCATGCAACAAGCTTCTCCTTC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCAAACACCTTCCACTaGAAGTGGGCAATTATATTA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGANTFH*KWAIIL
Trigger: TAATATAATTGCCCACTTCCAGTGGAAGGTGTTTGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTTTAATTCTATCTTaGCAACTGCAGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSLILS*QLQQAA
Trigger: AGCAGCTTGCTGCAGTTGCCAAGATAGAATTAAAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGATGTCATCGTTTGGTaGAATCACAAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGDVIVW*NHKHKV
Trigger: CACTTTGTGTTTGTGATTCCACCAAACGATGACATC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCTTTTATGTCATGCTaGAAACAGAAGTATGCCTCT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAFMSC*KQKYAS
Trigger: AGAGGCATACTTCTGTTTCCAGCATGACATAAAAGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTTGGACTGAGATCATaGAACTTAAGTTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVGLRS*NLSLLA
Trigger: TGCCAACAAACTTAAGTTCCATGATCTCAGTCCAAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAAGTCGATTATGCCTTaGTTTTCTATGGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGKSIMP*FSMVKV
Trigger: CACCTTCACCATAGAAAACCAAGGCATAATCGACTT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCATGCCTCATGTGGCTaGTTATCTTCTTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGHASCG*LSSFEE
Trigger: TTCTTCAAAAGAAGATAACCAGCCACATGAGGCATG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGAGGATTTCCTCCTTaGATGAAGCAGAGAATGTTT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRGFPP*MKQRMF
Trigger: AAACATTCTCTGCTTCATCCAAGGAGGAAATCCTCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGGGCTTGTCATCTaGATGGTTTTTATAATGCCA +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGTGLVI*MVFIMP
Trigger: TGGCATTATAAAAACCATCCAGATGACAAGCCCAGT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACTCTGGAAAACTTTTaGTGTGTTGTTTCTCCCATA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTLENF*CVVSPI
Trigger: TATGGGAGAAACAACACATCAAAAGTTTTCCAGAGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTTCTTCTTTGTTGGTaGCAACGAGGATTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFLLCW*QRGFAY
Trigger: ATAAGCAAATCCTCGTTGTCACCAACAAAGAAGAAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR TCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGATTTCCTCCTTGGATaGAGCAGAGAATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGDFLLG*SRECFY
Trigger: ATAAAAACATTCTCTGCTTCATCCAAGGAGGAAATC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTGAAATATTTTCTTTaGTCACAGAGAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLKYFL*SQRGTE
Trigger: CTCTGTGCCTCTCTGTGAGCAAAGAAAATATTTCAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATATAATTCTTGTACTTaGCAATTTCTGCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYNSCT*QFLLRG
Trigger: ACCACGGAGCAGAAATTGGCAAGTACAAGAATTATA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATTCCCAAAGTTCAGTaGAGGGACATTAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGIPKVQ*RDIKME
Trigger: TTCCATTTTAATGTCCCTGCACTGAACTTTGGGAAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGATCCAAGTCAACTCTaGAAAACTTTTGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGDPSQL*KTFDVL
Trigger: CAACACATCAAAAGTTTTCCAGAGTTGACTTGGATC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTGTCCTCTTGTTCTTaGGAAATTGGAATTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLSSCS*EIGIKS
Trigger: ACTCTTAATTCCAATTTCCCAAGAACAAGAGGACAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATAACTTTTTCTGTGTaGAAGTCAGAACAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGITFSV*KSEQSV
Trigger: GACTGACTGTTCTGACTTCCACACAGAAAAAGTTAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR GCA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTCTACGTTTTTCTTTaGTTGTTCCAAGAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFYVFL*LFQEVF
Trigger: GAACACTTCTTGGAACAAGCAAAGAAAAACGTAGAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGAGAATTACTATCTTaGTTTCTTTCCTATGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGELLS*FLSYEA
Trigger: TGCTTCATAGGAAAGAAACCAAGATAGTAATTCTCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CCA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTCTCCCAATCTTATTaGAGTGGAAAAAGACATCAA +
Preference number: 4 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFSQSY*SGKRHQ
Trigger: TTGATGTCTTTTTCCACTCCAATAAGATTGGGAGAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp ATGGCGAGGCTTCGGTCCAGCGGTCCAGGGCACTGTCCAGGGAGCTaGCTGAGCCCTGACTTAGCTCTTTTTGACTTGAACCTTGACGCT +
Preference number: 5 (lower is better)
Translates to: MARLRSSGPGHCPGS*LSPDLALFDLNLDA
Trigger: AGCGTCAAGGTTCAAGTCAAAAAGAGCTAAGTCAGGGCTCAGGCAGCTCCCTGGACAGTGCCCTGGACCGCTGGACCGAAGCCTCGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp GCTGCTGCCAAGAACGGTCTGGAAGTGGACGGGTTTCTCGGGAGGTaGAGGCAAGGCCTTCAGAGCGAGCTCGTACTGGTAGTAACCCAA +
Preference number: 5 (lower is better)
Translates to: AAAKNGLEVDGFLGR*RQGLQSELVLVVTQ
Trigger: TTGGGTTACTACCAGTACGAGCTCGCTCTGAAGGCCTTGCCTGCACCTCCCGAGAAACCCGTCCACTTCCAGACCGTTCTTGGCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp ACGTGGTCCAGAAAGAGCATGCTGTCTCCTTGGACCAGTTTCCTCTaGTTCTCGAAGGTCCGGGAGATGATGGAGAGGCGCTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: TWSRKSMLSPWTSFL*FSKVREMMERRSRS
Trigger: GCTCCGAGAGCGCCTCTCCATCATCTCCCGGACCTTCGAGAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GAGTTGGGCCAGACATCACCTTCCGGGGGCTCGATCGTGAAAACGTaGTCCAGAAAGAGCATGCTGTCTCCTTGGACCAGTTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ELGQTSPSGGSIVKT*SRKSMLSPWTSFLW
Trigger: CCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCACGATCGAGCCCCCGGAAGGTGATGTCTGGCCCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp TCAGGAACTCTGAGGGTGTCAGCATCCGGTTCACTTCCTCCTCTGTaGCCACCTTCGGGCTCATGGGTGGTAAGACTTTGCTCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SGTLRVSASGSLPPL*PPSGSWVVRLCSAV
Trigger: GACTGCAGAGCAAAGTCTTACCACCCATGAGCCCGAAGGTGGTCACAGAGGAGGAAGTGAACCGGATGCTGACACCCTCAGAGTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GATCTTCTTGGGCCGCACGGTCTCTGCAGCCCGGATGCTGAAGGCTaGGTTCTCCACAATGAAGGAGAAGCTTGTTGCATGCAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: DLLGPHGLCSPDAEG*VLHNEGEACCMQED
Trigger: GTCTTCTTGCATGCAACAAGCTTCTCCTTCATTGTGGAGAACCCAGCCTTCAGCATCCGGGCTGCAGAGACCGTGCGGCCCAAGAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp GGCGCTCTCGGAGCGAGGGATCCAAGACGCTGTCTTCAAGGATCATaGTGGTTTCCTGCTTTTCCTCCTTGTTCAGGCCATCACAGATCT +
Preference number: 5 (lower is better)
Translates to: GALGARDPRRCLQGS*WFPAFPPCSGHHRS
Trigger: AGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGACAGCGTCTTGGATCCCTCGCTCCGAGAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp TTCTCTTCTGCTGTTAGGGCGTCATACTCGTCCTCGTCCAGTGTCTaGAGACGCTCCTTCTCCTTTGCCAGGGCTTCCTTGCGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: FSSAVRASYSSSSSV*RRSFSFARASLRLF
Trigger: GAACAAACGCAAGGAAGCCCTGGCAAAGGAGAAGGAGCGTCTCCAGACACTGGACGAGGACGAGTATGACGCCCTAACAGCAGAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp CCTATGAGTGACGATAGGCACAGGATGCCTTTAGTCTCACCCAGATaGCTGGGCTCAAAGAAGACTTCCACGCTGACTTCAGTGCCACCC +
Preference number: 5 (lower is better)
Translates to: PMSDDRHRMPLVSPR*LGSKKTSTLTSVPP
Trigger: GGGTGGCACTGAAGTCAGCGTGGAAGTCTTCTTTGAGCCCAGCCATCTGGGTGAGACTAAAGGCATCCTGTGCCTATCGTCACTCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp TGCCAATTTCTGCTCCGTGGTGAGGGACATCTCTTTCAGGAACTCTaGGGGTGTCAGCATCCGGTTCACTTCCTCCTCTGTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: CQFLLRGEGHLFQEL*GCQHPVHFLLCDHL
Trigger: AAGGTGGTCACAGAGGAGGAAGTGAACCGGATGCTGACACCCTCAGAGTTCCTGAAAGAGATGTCCCTCACCACGGAGCAGAAATTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp GCTCTGGCTTCTTTCCGTTCCCGCGGAGCTGTATTTTATCGCTTCTaGGACCATGGTGGATGTCGCGGGCTTTTTGATTTCTTCGGGTCC +
Preference number: 5 (lower is better)
Translates to: ALASFRSRGAVFYRF*DHGGCRGLFDFFGS
Trigger: GGACCCGAAGAAATCAAAAAGCCCGCGACATCCACCATGGTCTCAGAAGCGATAAAATACAGCTCCGCGGGAACGGAAAGAAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp CTGAATCGTGGCAAACTCTATTTTGTTGCACGACAGGGTCATACTTaGGATGATCACCGTGGCCTGGAGGCAGAGGTGAATGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: LNRGKLYFVARQGHT*DDHRGLEAEVNGWP
Trigger: GGGCCAACCATTCACCTCTGCCTCCAGGCCACGGTGATCATCCCAAGTATGACCCTGTCGTGCAACAAAATAGAGTTTGCCACGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp CTCCTTGGCAAGTCTTTCCAGCTCCCTCTTCTTTCTCTCCCGGAGTaGCTGCCGAACATCACGGTCAAATGCAACTTTCTCTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LLGKSFQLPLLSLPE*LPNITVKCNFLFCC
Trigger: ACAGCAGAAGAGAAAGTTGCATTTGACCGTGATGTTCGGCAGGCACTCCGGGAGAGAAAGAAGAGGGAGCTGGAAAGACTTGCCAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp AAAGTAGACTGTGATGTTGTTGATCTTCTTGGGCCGCACGGTCTCTaGAGCCCGGATGCTGAAGGCTGGGTTCTCCACAATGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: KVDCDVVDLLGPHGL*SPDAEGWVLHNEGE
Trigger: TTCTCCTTCATTGTGGAGAACCCAGCCTTCAGCATCCGGGCTGCAGAGACCGTGCGGCCCAAGAAGATCAACAACATCACAGTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GTAATCCTTGTTCTCCTCTGGAGTGAAGAGGATTCGGAATACAGATaGCACACCAGGGGCTACCTTGTGGCCGATGTCTTTGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: VILVLLWSEEDSEYR*HTRGYLVADVFGAD
Trigger: ATCAGCCCCAAAGACATCGGCCACAAGGTAGCCCCTGGTGTGCCATCTGTATTCCGAATCCTCTTCACTCCAGAGGAGAACAAGGATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GCTCTCGGAGCGAGGGATCCAAGACGCTGTCTTCAAGGATCATGCTaGTTTCCTGCTTTTCCTCCTTGTTCAGGCCATCACAGATCTTGT +
Preference number: 5 (lower is better)
Translates to: ALGARDPRRCLQGSC*FPAFPPCSGHHRSC
Trigger: ACAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGACAGCGTCTTGGATCCCTCGCTCCGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp TTGGCAAGTCTTTCCAGCTCCCTCTTCTTTCTCTCCCGGAGTGCCTaGCGAACATCACGGTCAAATGCAACTTTCTCTTCTGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LASLSSSLFFLSRSA*RTSRSNATFSSAVR
Trigger: CCTAACAGCAGAAGAGAAAGTTGCATTTGACCGTGATGTTCGGCAGGCACTCCGGGAGAGAAAGAAGAGGGAGCTGGAAAGACTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp GAAGACTTCCACGCTGACTTCAGTGCCACCCTGGGCTCCTGGGGCTaGGTTAATAACTTTTTCTGTGTGGAAGTCAGAACAGTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: EDFHADFSATLGSWG*VNNFFCVEVRTVSL
Trigger: AAGACTGACTGTTCTGACTTCCACACAGAAAAAGTTATTAACGCAGCCCCAGGAGCCCAGGGTGGCACTGAAGTCAGCGTGGAAGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GTCTTTGAACGTCACTATGTCGTCCAGGTTGGCAGTCAGTGTCAGTaGGATGTCATCTTCTGCAGGAACTGCACCCTCACTGGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: VFERHYVVQVGSQCQ*DVIFCRNCTLTGFN
Trigger: GTTAAACCCAGTGAGGGTGCAGTTCCTGCAGAAGATGACATCCCACTGACACTGACTGCCAACCTGGACGACATAGTGACGTTCAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp ATGCCATGGGTGAAGCGGGCCTGGTTTGCTATGTTCGTGTCTTTCTaGACTGTGTCTGAGAACTTGGCCATTTTAGTTGCTCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: MPWVKRAWFAMFVSF*TVSENLAILVAPGL
Trigger: CAAGCCTGGAGCAACTAAAATGGCCAAGTTCTCAGACACAGTCCAGAAAGACACGAACATAGCAAACCAGGCCCGCTTCACCCATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp TTGTGCAAGGTCAGTCTCCCGCATAGTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAATGTTCCCTCAGAGTTTGGAGGCACAGCG +
Preference number: 5 (lower is better)
Translates to: LCKVSLPHSSPAFRG*NSNENVPSEFGGTA
Trigger: CGCTGTGCCTCCAAACTCTGAGGGAACATTCTCATTTGAATTCCAGCCCCTGAAAGCTGGAGAACTATGCGGGAGACTGACCTTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp CTCAAAGAAGACTTCCACGCTGACTTCAGTGCCACCCTGGGCTCCTaGGGCTGCGTTAATAACTTTTTCTGTGTGGAAGTCAGAACAGTC +
Preference number: 5 (lower is better)
Translates to: LKEDFHADFSATLGS*GCVNNFFCVEVRTV
Trigger: GACTGTTCTGACTTCCACACAGAAAAAGTTATTAACGCAGCCCCAGGAGCCCAGGGTGGCACTGAAGTCAGCGTGGAAGTCTTCTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GGGAATTTGGCAGTACAAGGAGCTCTCGAACTCTCCGATGTCCATTaGCGAGAACTTCACTTTGAGCTTTTGAGTCTTTCCTACGGGCAC +
Preference number: 5 (lower is better)
Translates to: GNLAVQGALELSDVH*RELHFELLSLSYGH
Trigger: GTGCCCGTAGGAAAGACTCAAAAGCTCAAAGTGAAGTTCTCGCCAATGGACATCGGAGAGTTCGAGAGCTCCTTGTACTGCCAAATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGGGTGGCTCCTCCTTaGCCGCAGGGCCTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGVAPP*PQGLLW
Trigger: CCAAAGCAGGCCCTGCGGCAAAGGAGGAGCCACCCC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp AAGACTTTGCTCTGCAGTCCTGAGATCACTTTGGCCATCTTCCGATaGATGGCCCCCATGGACTCCTCTAGCCTTTTATTTGTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KTLLCSPEITLAIFR*MAPMDSSSLLFVCL
Trigger: CAAACAGACAAATAAAAGGCTAGAGGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAAAGTGATCTCAGGACTGCAGAGCAAAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp TACTTCCATCTGGACATGAGCACTTATTTCAGCGGTCTCCTCCTCTaGGAGTTCCTCAGCCATCACCTCATATTGATCGACAGCCTCATA +
Preference number: 5 (lower is better)
Translates to: YFHLDMSTYFSGLLL*EFLSHHLILIDSLI
Trigger: TATGAGGCTGTCGATCAATATGAGGTGATGGCTGAGGAACTCCCAGAGGAGGAGACCGCTGAAATAAGTGCTCATGTCCAGATGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGTTCCTGGGAGGCCTaGGACTGGCGACGGCTACTG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGGSWEA*DWRRLL
Trigger: CAGTAGCCGTCGCCAGTCCAAGGCCTCCCAGGAACC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCGTGGCTCCAGGCCTaGACCCTGGGCCAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAWLQA*TLGQKC
Trigger: ACACTTCTGGCCCAGGGTCAAGGCCTGGAGCCACGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGGGTCTGTGGTCTaGCCCACCAGCAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRGSVV*PTSRKG
Trigger: CCCCTTCCTGCTGGTGGGCAAGACCACAGACCCCCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp CCGGATGCTGAAGGCTGGGTTCTCCACAATGAAGGAGAAGCTTGTTaGATGCAAGAAGACATTCTTGAAGGGGATGATGATGTTGTATCC +
Preference number: 5 (lower is better)
Translates to: PDAEGWVLHNEGEAC*MQEDILEGDDDVVS
Trigger: GGATACAACATCATCATCCCCTTCAAGAATGTCTTCTTGCATGCAACAAGCTTCTCCTTCATTGTGGAGAACCCAGCCTTCAGCATCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCCGCAGGGCCTGCTTaGGGCCTTTTGACCTTCCGT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGAAGPA*GLLTFR
Trigger: ACGGAAGGTCAAAAGGCCCAAAGCAGGCCCTGCGGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp CCAATGGCACCTCATAGACTTCACAGGGAGAATAGTTCTGGAATATaGTTTCAGACGGAAAGGGCTGGAACAAGGCCTGATCCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: PMAPHRLHRENSSGI*FQTERAGTRPDPSQ
Trigger: TTGACTTGGATCAGGCCTTGTTCCAGCCCTTTCCGTCTGAAATCATATTCCAGAACTATTCTCCCTGTGAAGTCTATGAGGTGCCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp TCTATTGATTCCATCTTTAATTCTATCTTGGCAACTGCAGCAAGCTaGTTGTTTGTGGCGCCTTGTGCTTTCTTTAGGGGTGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SIDSIFNSILATAAS*LFVAPCAFFRGGSS
Trigger: GGAGGAGCCACCCCTAAAGAAAGCACAAGGCGCCACAAACAAGCAGCTTGCTGCAGTTGCCAAGATAGAATTAAAGATGGAATCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp TGTGAAGTCCAAGTATTGCAACAGGAGTTTTGGTCCAGAGAGCTCTaGCTGGTAGCTGAAGTTGAACTTGCCCGTGTTGATGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: CEVQVLQQEFWSREL*LVAEVELARVDETE
Trigger: TTCAGTTTCATCAACACGGGCAAGTTCAACTTCAGCTACCAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTGGACTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp ATGCTGAAGGCTGGGTTCTCCACAATGAAGGAGAAGCTTGTTGCATaGAAGAAGACATTCTTGAAGGGGATGATGATGTTGTATCCGGCT +
Preference number: 5 (lower is better)
Translates to: MLKAGFSTMKEKLVA*KKTFLKGMMMLYPA
Trigger: AGCCGGATACAACATCATCATCCCCTTCAAGAATGTCTTCTTGCATGCAACAAGCTTCTCCTTCATTGTGGAGAACCCAGCCTTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp GTAATAGTGGGTATCCAGGCTAAAATGCGCTCCCAAGTTGAGTTCTaGAGCAAATGGTTTGTCGGAAACAATGGTAGAACCAATCCCGGT +
Preference number: 5 (lower is better)
Translates to: VIVGIQAKMRSQVEF*SKWFVGNNGRTNPG
Trigger: ACCGGGATTGGTTCTACCATTGTTTCCGACAAACCATTTGCTCCAGAACTCAACTTGGGAGCGCATTTTAGCCTGGATACCCACTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTCACCAACTGGAGCTaGGGGACCACACACCTGGCT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVTNWS*GTTHLA
Trigger: AGCCAGGTGTGTGGTCCCCAAGCTCCAGTTGGTGAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp TCAGCGGTCTCCTCCTCTGGGAGTTCCTCAGCCATCACCTCATATTaGTCGACAGCCTCATATTTAGTGTACTCTTTTTCTACGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SAVSSSGSSSAITSY*STASYLVYSFSTFF
Trigger: GAAAAACGTAGAAAAAGAGTACACTAAATATGAGGCTGTCGATCAATATGAGGTGATGGCTGAGGAACTCCCAGAGGAGGAGACCGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 90 bp CCTCTTGTTCTTGGGAAATTGGAATTAAGAGTGGGTATTCGGTCATaGCTTTCTTCTTCCTGGTGGTTTCTTCAAGTGTTGCGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLVLGKLELRVGIRS*LSSSWWFLQVLRAL
Trigger: GAGAGCACGCAACACTTGAAGAAACCACCAGGAAGAAGAAAGCCATGACCGAATACCCACTCTTAATTCCAATTTCCCAAGAACAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGCGGTTGGCCGGCTaGTTGGAGATGGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMRLAG*LEMGLM
Trigger: CATCAAGCCCATCTCCAACAAGCCGGCCAACCGCAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGCTCAGGGGACCCGTaGACATCAATCAGGAACTCT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGSGDP*TSIRNS
Trigger: AGAGTTCCTGATTGATGTCAACGGGTCCCCTGAGCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACTATGTCGTCCAGGTaGGCAGTCAGTGTCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTMSSR*AVSVSG
Trigger: CCCACTGACACTGACTGCCAACCTGGACGACATAGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTCCCCGGTTCCTTCTaGCTCTGCTTTTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFPGSF*LCFSLG
Trigger: CCCCAAGGAAAAGCAGAGCAAGAAGGAACCGGGGAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACACACCAGCTTCTCTTaGACTTTCTTGGGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGHTSFS*TFLGVA
Trigger: CGCCACGCCCAAGAAAGTCAAAGAGAAGCTGGTGTG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGCCCTCCGTACACCTaGATGGGGAGAATGACTTCT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGPPYT*MGRMTS
Trigger: AGAAGTCATTCTCCCCATCAAGGTGTACGGAGGGCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCCGCTCTTCCAGGTaGGATGTGACTGAGATCCCT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGCRSSR*DVTEIP
Trigger: AGGGATCTCAGTCACATCCAACCTGGAAGAGCGGCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACTGCAGCAAGCTGCTaGTTTGTGGCGCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTAASC*FVAPCA
Trigger: AGCACAAGGCGCCACAAACAAGCAGCTTGCTGCAGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGGCCATGGCTGATCTaGATTTTGAGTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGPWLI*ILSSRP
Trigger: GGGCCTGGAACTCAAAATCAAGATCAGCCATGGCCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGCTGGGCAAGGCTGTaGTTGACGAGGGAGACTGTT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSWARL*LTRETV
Trigger: AACAGTCTCCCTCGTCAACAACAGCCTTGCCCAGCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCCAAGGTGATGACCTaGGCTTCCTGGAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSKVMT*ASWSSG
Trigger: TCCAGAGCTCCAGGAAGCCAAGGTCATCACCTTGGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACCGCGTGGCTTGAGTTaGATACACAACGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGPRGLS*IHNGAK
Trigger: TTTGGCCCCGTTGTGTATCAAACTCAAGCCACGCGG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTGCCTGGAGCGCACTaGGCAGTTGAAATTCACCAC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVPGAH*AVEIHH
Trigger: GTGGTGAATTTCAACTGCCAAGTGCGCTCCAGGCAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGCATGCTGTCTCCTaGGACCAGTTTCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEHAVS*DQFPLV
Trigger: AACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCTGGCAGCTGGACTTaGGTGAGTTTTCGGCAACTC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSGSWT*VSFRQL
Trigger: GAGTTGCCGAAAACTCACCAAAGTCCAGCTGCCAGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCCATGCTGATGGCATaGGCTGTCTTTCCTGACAAG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAMLMA*AVFPDK
Trigger: CTTGTCAGGAAAGACAGCCAATGCCATCAGCATGGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTCTCCTGCATCTCCTaGGCAAGTCTTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGFSCIS*ASLSSS
Trigger: GGAGCTGGAAAGACTTGCCAAGGAGATGCAGGAGAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTCACTCTCCAGAGCTaGCTTCCAGCTTACACCTTC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVTLQS*LPAYTF
Trigger: GAAGGTGTAAGCTGGAAGCAAGCTCTGGAGAGTGAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGGATCTGGTCTCCTTaGGGAAGCTTGTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRIWSP*GSLSLS
Trigger: GGAGAGTGACAAGCTTCCCAAAGGAGACCAGATCCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTAGGTGGAGAGGGTaGTTCCTCTTGAGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLRWRG*FLLSLG
Trigger: ACCAAGGCTCAAGAGGAACAACCCTCTCCACCTAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTCAGTGTCTCCATGTaGCCAGGGAACAAGGATGAC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVSVSM*PGNKDD
Trigger: GTCATCCTTGTTCCCTGGCAACATGGAGACACTGAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGTGCCCTGGTGCTaGCGATTCTCCAGATTCATG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRVPWC*RFSRFM
Trigger: CATGAATCTGGAGAATCGCAAGCACCAGGGCACTCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGTTGTTGATCTTCTaGGGCCGCACGGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMLLIF*GRTVSA
Trigger: TGCAGAGACCGTGCGGCCCAAGAAGATCAACAACAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGGGTGGTAAGACTTaGCTCTGCAGTCCTGAGATC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMGGKT*LCSPEI
Trigger: GATCTCAGGACTGCAGAGCAAAGTCTTACCACCCAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCCTGCTTTTCCTCCTaGTTCAGGCCATCACAGATC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSCFSS*FRPSQI
Trigger: GATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTTGCTCTGCTTTTCCTaGGGGCGGAAGTCATCATTC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLLCFS*GRKSSF
Trigger: GAATGATGACTTCCGCCCCAAGGAAAAGCAGAGCAA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCGATATAGTAGCTGCTaGGCGGAGAGCTGGATGATT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRYSSC*AESWMI
Trigger: AATCATCCAGCTCTCCGCCAAGCAGCTACTATATCG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGATGCCAGAAGTGGGTaGGATCTCAAAGATCCGAGA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGDARSG*DLKDPR
Trigger: TCTCGGATCTTTGAGATCCAACCCACTTCTGGCATC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGCTCTGGCCAATTaGGAACAACAGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGRALAN*EQQRLA
Trigger: AGCCAGTCTCTGTTGTTCCAAATTGGCCAGAGCTCT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCGAATCACATTCACTaGGCTGTGGTTGGTGATGGT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGANHIH*AVVGDG
Trigger: ACCATCACCAACCACAGCCAAGTGAATGTGATTCGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGAAGCAAAATCCACATaGGCACTGAACTGGATCCGC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGEAKST*ALNWIR
Trigger: GCGGATCCAGTTCAGTGCCAATGTGGATTTTGCTTC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGCAAAACTGACTGCCTaGGAGGCTTCTTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGAKLTA*EASSEI
Trigger: GATCTCAGAAGAAGCCTCCAAGGCAGTCAGTTTTGC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCTCCAAGTGGGAGGTaGGGAATTTGGCAGTACAAG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSPSGR*GIWQYK
Trigger: CTTGTACTGCCAAATTCCCAACCTCCCACTTGGAGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATTGCAACAGGAGTTTaGGTCCAGAGAGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGIATGV*VQRALP
Trigger: AGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAAAGGGAAGATGCTCTaGGTCCAGGGAAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGKGKML*VQGNLQ
Trigger: CTGGAGATTTCCCTGGACCAAGAGCATCTTCCCTTT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 90 bp TCGGTCATGGCTTTCTTCTTCCTGGTGGTTTCTTCAAGTGTTGCGTaGTCTCTGACAGAAACTTTCCTTTCTATTGATTCCATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SVMAFFFLVVSSSVA*SLTETFLSIDSIFN
Trigger: ATTAAAGATGGAATCAATAGAAAGGAAAGTTTCTGTCAGAGAGCACGCAACACTTGAAGAAACCACCAGGAAGAAGAAAGCCATGACCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACATGGAGTCTTTGTaGCCAATGTTTCGGACCAGC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGNMESL*PMFRTS
Trigger: GCTGGTCCGAAACATTGGCAACAAAGACTCCATGTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTATTTCTGCACGGTGTaGGAACACAAGGTCACCTTG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGYFCTV*EHKVTL
Trigger: CAAGGTGACCTTGTGTTCCAACACCGTGCAGAAATA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGCTTCCTTGCGTTaGTTCTCTTCTTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRASLR*FSSCSF
Trigger: AAAGGAGCAAGAAGAGAACAAACGCAAGGAAGCCCT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTTTGTGCCAGGTTCTaGTCAGAGTCCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGFCARF*SESFRK
Trigger: CTTCCTGAAGGACTCTGACAAGAACCTGGCACAAAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTGAGTTTCCCGCACTaGCTCTGGTTTGTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLSFPH*LWFVFQ
Trigger: TTGAAAGACAAACCAGAGCAAGTGCGGGAAACTCAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGCCTCTACCACCATaGGAGAATCATTCAGGATCG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGMPLPP*ENHSGS
Trigger: CGATCCTGAATGATTCTCCAATGGTGGTAGAGGCAT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCCACGGTTTTTCAGTaGAAGGGTCTGCTTTACCTC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSTVFQ*KGLLYL
Trigger: GAGGTAAAGCAGACCCTTCAACTGAAAAACCGTGGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGACAGTACCCAAATaGGATGTGTTCCATCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMTVPK*DVFHQG
Trigger: GCCCTGATGGAACACATCCAATTTGGGTACTGTCAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCTTCACTTTGAGCTTTaGAGTCTTTCCTACGGGCAC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGLHFEL*SLSYGH
Trigger: GTGCCCGTAGGAAAGACTCAAAAGCTCAAAGTGAAG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGCTGATCTTGATTTaGAGTTCCAGGCCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWLILI*SSRPFK
Trigger: CTTGAAGGGCCTGGAACTCAAAATCAAGATCAGCCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGGAGAAGTGGGGCTaGAGTTTCTTGACATCCCAT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMEKWG*SFLTSH
Trigger: ATGGGATGTCAAGAAACTCAAGCCCCACTTCTCCAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGGGATGATGATGTaGTATCCGGCTCTGATTAGG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGKGMMM*YPALIR
Trigger: CCTAATCAGAGCCGGATACAACATCATCATCCCCTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATCCATAAGGATCGTCTaGATGGAATCACTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSIRIV*MESLKS
Trigger: GGACTTCAGTGATTCCATCAAGACGATCCTTATGGA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGTGGCAAACTCTATTTaGTTGCACGACAGGGTCATA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGVANSI*LHDRVI
Trigger: TATGACCCTGTCGTGCAACAAAATAGAGTTTGCCAC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATGTGTTTGTCCAGCTaGTTAGTAGACTTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGMCLSS*LVDFGV
Trigger: CACCCCAAAGTCTACTAACAAGCTGGACAAACACAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCGTTTGTTCTCTTCTaGCTCCTTTTTAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAFVLF*LLFSLL
Trigger: GAGAAGGCTAAAAAGGAGCAAGAAGAGAACAAACGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGTGCCTGCTTTTCATaGGGTTTCAGAGTCATGTTG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGSACFS*GFRVML
Trigger: CAACATGACTCTGAAACCCAATGAAAAGCAGGCACT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGCTGGTTATCTTCTTTaGAAGAATTGGACTCTCCCC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGAGYLL*KNWTLP
Trigger: GGGGAGAGTCCAATTCTTCAAAAGAAGATAACCAGC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAATATCAAGATGTTGTaGTCGGTCACAAAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGNIKML*SVTKAG
Trigger: GCCAGCCTTTGTGACCGACAACAACATCTTGATATT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGGCTTGATGACAATGTaGATGTCACAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGGLMTM*MSQEIL
Trigger: CAAGATCTCCTGTGACATCAACATTGTCATCAAGCC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGGAAAGCTTGCACTaGACACACATCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLESLH*THIFFR
Trigger: CCTGAAGAAGATGTGTGTCAAGTGCAAGCTTTCCAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTAGCTCTTTTTGACTaGAACCTTGACGCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLALFD*NLDAQA
Trigger: TGCCTGAGCGTCAAGGTTCAAGTCAAAAAGAGCTAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACCCTTGCTCCTCCTaGTTGATGATCTTTACTGTC +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGNPCSS*LMIFTV
Trigger: GACAGTAAAGATCATCAACAAGGAGGAGCAAGGGTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAGAGGATTTCCTCCTaGGATGAAGCAGAGAATGTT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQRISS*DEAENV
Trigger: AACATTCTCTGCTTCATCCAAGGAGGAAATCCTCTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 90 bp TGGCTTTCTTCTTCCTGGTGGTTTCTTCAAGTGTTGCGTGCTCTCTaGCAGAAACTTTCCTTTCTATTGATTCCATCTTTAATTCTATCT +
Preference number: 5 (lower is better)
Translates to: WLSSSWWFLQVLRAL*QKLSFLLIPSLILS
Trigger: AGATAGAATTAAAGATGGAATCAATAGAAAGGAAAGTTTCTGTCAGAGAGCACGCAACACTTGAAGAAACCACCAGGAAGAAGAAAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGAGATGGTGAATTCTTaGGGTTTTGTGGTAGGCATT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGEMVNS*GFVVGI
Trigger: AATGCCTACCACAAAACCCAAAGAATTCACCATCTC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAAGGGATTTCTTGTTaGCCATGCGAACCCGAAATA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGKGISC*PCEPEI
Trigger: TATTTCGGGTTCGCATGGCAAACAAGAAATCCCTTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTCTGGAGCAAATGGTTaGTCGGAAACAATGGTAGAA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGSGANG*SETMVE
Trigger: TTCTACCATTGTTTCCGACAAACCATTTGCTCCAGA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGTTCATACTTTTCATaGCCTTGGAGGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGCSYFS*PWRFLC
Trigger: ACACAGGAACCTCCAAGGCAATGAAAAGTATGAACA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGCAGTATTTTGGGTCATaGAAGACTCATGAGCTGACT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGQYFGS*KTHELT
Trigger: AGTCAGCTCATGAGTCTTCAATGACCCAAAATACTG...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACGCACTTGCTCTGGTTaGTCTTTCAATTTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGRTCSG*SFNFCL
Trigger: CAAACAGAAATTGAAAGACAAACCAGAGCAAGTGCG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGACTAGAAAGTAGGTGCTaGCTTTTATGTCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLESRC*LLCHAG
Trigger: TCCAGCATGACATAAAAGCAAGCACCTACTTTCTAG...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGTTGGAGATGGGCTaGATGACAATGTTGATGTCA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLLEMG*MTMLMS
Trigger: TGACATCAACATTGTCATCAAGCCCATCTCCAACAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATATCAAAATAGGACCTaGTTCTCCAAGTGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGYQNRT*FSKWEV
Trigger: AACCTCCCACTTGGAGAACAAGGTCCTATTTTGATA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAGATGTTTCTTCTTTGTaGGTGACAACGAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGDVSSL*VTTRIC
Trigger: GCAAATCCTCGTTGTCACCAACAAAGAAGAAACATC...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATGGGGCTTGAGTTTCTaGACATCCCATTTAAACCTT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGWGLSF*TSHLNL
Trigger: AAGGTTTAAATGGGATGTCAAGAAACTCAAGCCCCA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGTGCAAGAAGACATTCTaGAAGGGGATGATGATGTTG +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGCKKTF*KGMMML
Trigger: CAACATCATCATCCCCTTCAAGAATGTCTTCTTGCA...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGATTGGTTATGATGGTGTaGAGGAAGATGTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGLVMMV*RKMSES
Trigger: AGATTCAGACATCTTCCTCAACACCATCATAACCAA...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACTCTGGAAAACTTTaGATGTGTTGTTTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGNSGKL*MCCFSH
Trigger: ATGGGAGAAACAACACATCAAAAGTTTTCCAGAGTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATCTTGTATTTTTCTTaGTCTTCCTCTTCTTCGGTG +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGILYFS*SSSSSV
Trigger: CACCGAAGAAGAGGAAGACAAAGAAAAATACAAGAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAACCAAAGATGTATTATaGAGGGAACACATCAAGGTA +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGTKDVL*REHIKV
Trigger: TACCTTGATGTGTTCCCTCAATAATACATCTTTGGT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGGTAGATTTTAAACTTTaGTGCCAGGTTCTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGVDFKL*CQVLVR
Trigger: TCTGACAAGAACCTGGCACAAAAGTTTAAAATCTAC...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp ACAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAAGGATGACTTATACTaGTCTCTTGACTTTCCACAA +
Preference number: 5 (lower is better)
Translates to: TTKHIQESPWKIPLFFVGKDDLY*SLDFPQ
Trigger: TTGTGGAAAGTCAAGAGACAAGTATAAGTCATCCTT...CCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS-3UTR CAA 90 bp CAACTAAACACATACAAGAAAGTCCTTGGAAAATTCCCCTATTCTTTGTTGGGAATAGATGTTTCTTCTTaGTTGGTGACAACGAGGATT +
Preference number: 5 (lower is better)
Translates to: QLNTYKKVLGKFPYSLLGIDVSS*LVTTRI
Trigger: AATCCTCGTTGTCACCAACAAAGAAGAAACATCTAT...TCCCAACAAAGAATAGGGGAATTTTCCAAGGACTTTCTTGTATGTGTTTAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CCCTTGCGACCCCCGCCCCCTGAAGGCGCCTGGCGCTaGTCGTCAGCCTCATGTGACATCTCGTCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: PLRPPPPEGAWR*SSASCDISSVP
Trigger: AGGCACGGACGAGATGTCACATGAGGCTGACGACCAGCGCCAGGCGCCTTCAGGGGGCGGGGGTCGCAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp GAAGTCCATCTCCGTATACTCTACAGTGTGTGGGGCTaGCAGAGAGCTGGCGGTGACCGAGGTGGCCGCGAT +
Preference number: 6 (lower is better)
Translates to: EVHLRILYSVWG*QRAGGDRGGRD
Trigger: ATCGCGGCCACCTCGGTCACCGCCAGCTCTCTGGCAGCCCCACACACTGTAGAGTATACGGAGATGGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GGGCCGCACGGTCTCTGCAGCCCGGATGCTGAAGGCTaGGTTCTCCACAATGAAGGAGAAGCTTGTTGCATG +
Preference number: 6 (lower is better)
Translates to: GPHGLCSPDAEG*VLHNEGEACCM
Trigger: CATGCAACAAGCTTCTCCTTCATTGTGGAGAACCCAGCCTTCAGCATCCGGGCTGCAGAGACCGTGCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ACGGGGTTCCCGTTATCTGTGGGTTCCTGGGAGGCCTaGGACTGGCGACGGCTACTGGAAGTAGAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: TGFPLSVGSWEA*DWRRLLEVEPF
Trigger: AAAGGGCTCTACTTCCAGTAGCCGTCGCCAGTCCAAGGCCTCCCAGGAACCCACAGATAACGGGAACCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CAAAGAGCGTGTCCAGGCCGTCGAACACCACGCCTCTaGAACAGTTGCTCAGCTGTATCCGCTCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: QRACPGRRTPRL*NSCSAVSAQPG
Trigger: TCCTGGCTGAGCGGATACAGCTGAGCAACTGTTTCAGAGGCGTGGTGTTCGACGGCCTGGACACGCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp CTTCGGTCCAGCGGTCCAGGGCACTGTCCAGGGAGCTaGCTGAGCCCTGACTTAGCTCTTTTTGACTTGAAC +
Preference number: 6 (lower is better)
Translates to: LRSSGPGHCPGS*LSPDLALFDLN
Trigger: GTTCAAGTCAAAAAGAGCTAAGTCAGGGCTCAGGCAGCTCCCTGGACAGTGCCCTGGACCGCTGGACCGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp TTCCCGTTATCTGTGGGTTCCTGGGAGGCCTTGGACTaGCGACGGCTACTGGAAGTAGAGCCCTTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: FPLSVGSWEALD*RRLLEVEPFFP
Trigger: GGGGAAAAAGGGCTCTACTTCCAGTAGCCGTCGCCAGTCCAAGGCCTCCCAGGAACCCACAGATAACGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp AGTTGGAACACGGGGTTCCCGTTATCTGTGGGTTCCTaGGAGGCCTTGGACTGGCGACGGCTACTGGAAGTA +
Preference number: 6 (lower is better)
Translates to: SWNTGFPLSVGS*EALDWRRLLEV
Trigger: TACTTCCAGTAGCCGTCGCCAGTCCAAGGCCTCCCAGGAACCCACAGATAACGGGAACCCCGTGTTCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp ATCACTGAAGTCCATCTCCGTATACTCTACAGTGTGTaGGGCTGCCAGAGAGCTGGCGGTGACCGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: ITEVHLRILYSV*GCQRAGGDRGG
Trigger: GCCACCTCGGTCACCGCCAGCTCTCTGGCAGCCCCACACACTGTAGAGTATACGGAGATGGACTTCAGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCTGTTAGGGCGTCATACTCGTCCTCGTCCAGTGTCTaGAGACGCTCCTTCTCCTTTGCCAGGGCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: AVRASYSSSSSV*RRSFSFARASL
Trigger: CAAGGAAGCCCTGGCAAAGGAGAAGGAGCGTCTCCAGACACTGGACGAGGACGAGTATGACGCCCTAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp GTCAATCGTCTGTCCCGGGTACAACTCCATCCTGACGGGGTAAAGTaGGAACACGGGGTTCCCGTTATCTGTGGGTTCCTGGGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VNRLSRVQLHPDGVK*EHGVPVICGFLGGL
Trigger: AAGGCCTCCCAGGAACCCACAGATAACGGGAACCCCGTGTTCCAACTTTACCCCGTCAGGATGGAGTTGTACCCGGGACAGACGATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CTGAGGGTGTCAGCATCCGGTTCACTTCCTCCTCTGTaGCCACCTTCGGGCTCATGGGTGGTAAGACTTTGC +
Preference number: 6 (lower is better)
Translates to: LRVSASGSLPPL*PPSGSWVVRLC
Trigger: GCAAAGTCTTACCACCCATGAGCCCGAAGGTGGTCACAGAGGAGGAAGTGAACCGGATGCTGACACCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GATGATCACCGTGGCCTGGAGGCAGAGGTGAATGGTTaGCCCTCCGTACACCTTGATGGGGAGAATGACTTC +
Preference number: 6 (lower is better)
Translates to: DDHRGLEAEVNG*PSVHLDGENDF
Trigger: GAAGTCATTCTCCCCATCAAGGTGTACGGAGGGCCAACCATTCACCTCTGCCTCCAGGCCACGGTGATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CGGACCATTGCTTGCTGTCTGACTCCTGAGAGTAACTaGGGATGCTACTCATGCCTTCGCCATCGCCGCGGA +
Preference number: 6 (lower is better)
Translates to: RTIACCLTPESN*GCYSCLRHRRG
Trigger: TCCGCGGCGATGGCGAAGGCATGAGTAGCATCCCAAGTTACTCTCAGGAGTCAGACAGCAAGCAATGGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CTGTCCCGGGTACAACTCCATCCTGACGGGGTAAAGTaGGAACACGGGGTTCCCGTTATCTGTGGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: LSRVQLHPDGVK*EHGVPVICGFL
Trigger: CAGGAACCCACAGATAACGGGAACCCCGTGTTCCAACTTTACCCCGTCAGGATGGAGTTGTACCCGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GAGGGCTGGAAGTGCACTTGCAGCCCATACTCTCCCTaGGGTAGCATGGTGCCCTGCATCATGGACACAGTA +
Preference number: 6 (lower is better)
Translates to: EGWKCTCSPYSP*GSMVPCIMDTV
Trigger: TACTGTGTCCATGATGCAGGGCACCATGCTACCCAAGGGAGAGTATGGGCTGCAAGTGCACTTCCAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp ACAGGTTTGGAGGGCTGGAAGTGCACTTGCAGCCCATACTCTCCCTaGGGTAGCATGGTGCCCTGCATCATGGACACAGTAAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TGLEGWKCTCSPYSP*GSMVPCIMDTVKSS
Trigger: GGAGGACTTTACTGTGTCCATGATGCAGGGCACCATGCTACCCAAGGGAGAGTATGGGCTGCAAGTGCACTTCCAGCCCTCCAAACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CTGCTCCGTGGTGAGGGACATCTCTTTCAGGAACTCTaGGGGTGTCAGCATCCGGTTCACTTCCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLRGEGHLFQEL*GCQHPVHFLLC
Trigger: ACAGAGGAGGAAGTGAACCGGATGCTGACACCCTCAGAGTTCCTGAAAGAGATGTCCCTCACCACGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp AGTTGGGCCAGACATCACCTTCCGGGGGCTCGATCGTaGAAACGTGGTCCAGAAAGAGCATGCTGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SWARHHLPGARS*KRGPERACCLL
Trigger: AAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCACGATCGAGCCCCCGGAAGGTGATGTCTGGCCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp ATTGCTTGCTGTCTGACTCCTGAGAGTAACTTGGGATaGTACTCATGCCTTCGCCATCGCCGCGGACACGCA +
Preference number: 6 (lower is better)
Translates to: IACCLTPESNLG*YSCLRHRRGHA
Trigger: TGCGTGTCCGCGGCGATGGCGAAGGCATGAGTAGCATCCCAAGTTACTCTCAGGAGTCAGACAGCAAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp GTCCTCGTCCAGTGTCTGGAGACGCTCCTTCTCCTTTaGCAGGGCTTCCTTGCGTTTGTTCTCTTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: VLVQCLETLLLL*QGFLAFVLFLL
Trigger: GAGCAAGAAGAGAACAAACGCAAGGAAGCCCTGGCAAAGGAGAAGGAGCGTCTCCAGACACTGGACGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TGCAGCCCATACTCTCCCTTGGGTAGCATGGTGCCCTaGATCATGGACACAGTAAAGTCCTCCCCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: CSPYSPLGSMVP*IMDTVKSSPRC
Trigger: ACACCTAGGGGAGGACTTTACTGTGTCCATGATGCAGGGCACCATGCTACCCAAGGGAGAGTATGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TGTGATGTTGTTGATCTTCTTGGGCCGCACGGTCTCTaGAGCCCGGATGCTGAAGGCTGGGTTCTCCACAAT +
Preference number: 6 (lower is better)
Translates to: CDVVDLLGPHGL*SPDAEGWVLHN
Trigger: ATTGTGGAGAACCCAGCCTTCAGCATCCGGGCTGCAGAGACCGTGCGGCCCAAGAAGATCAACAACATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp AGAAAGAGCATGCTGTCTCCTTGGACCAGTTTCCTCTaGTTCTCGAAGGTCCGGGAGATGATGGAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: RKSMLSPWTSFL*FSKVREMMERR
Trigger: GCGCCTCTCCATCATCTCCCGGACCTTCGAGAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CAGACATCACCTTCCGGGGGCTCGATCGTGAAAACGTaGTCCAGAAAGAGCATGCTGTCTCCTTGGACCAGT +
Preference number: 6 (lower is better)
Translates to: QTSPSGGSIVKT*SRKSMLSPWTS
Trigger: ACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCACGATCGAGCCCCCGGAAGGTGATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp TTCAAGGTCACCACCACGTCCTTGGAACAGCCAGGGTaGAGATGCCCAATCTGTGGGGAGAAGGACAGTGTA +
Preference number: 6 (lower is better)
Translates to: FKVTTTSLEQPG*RCPICGEKDSV
Trigger: TACACTGTCCTTCTCCCCACAGATTGGGCATCTCCACCCTGGCTGTTCCAAGGACGTGGTGGTGACCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GGTGGTAAGACTTTGCTCTGCAGTCCTGAGATCACTTaGGCCATCTTCCGATGCATGGCCCCCATGGACTCC +
Preference number: 6 (lower is better)
Translates to: GGKTLLCSPEIT*AIFRCMAPMDS
Trigger: GGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAAAGTGATCTCAGGACTGCAGAGCAAAGTCTTACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CGTCCTCGTCCAGTGTCTGGAGACGCTCCTTCTCCTTaGCCAGGGCTTCCTTGCGTTTGTTCTCTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: RPRPVSGDAPSP*PGLPCVCSLLA
Trigger: AGCAAGAAGAGAACAAACGCAAGGAAGCCCTGGCAAAGGAGAAGGAGCGTCTCCAGACACTGGACGAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp GGGCTCGATCGTGAAAACGTGGTCCAGAAAGAGCATGCTGTCTCCTaGGACCAGTTTCCTCTGGTTCTCGAAGGTCCGGGAGATGATGGA +
Preference number: 6 (lower is better)
Translates to: GLDRENVVQKEHAVS*DQFPLVLEGPGDDG
Trigger: TCCATCATCTCCCGGACCTTCGAGAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCACGATCGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CAGGCCCTTCAAGACACACTTCTGATACGGTTGGAATaGCAGGTTGGCCGGTTCAGACTGACCCACGTCTAC +
Preference number: 6 (lower is better)
Translates to: QALQDTLLIRLE*QVGRFRLTHVY
Trigger: GTAGACGTGGGTCAGTCTGAACCGGCCAACCTGTCATTCCAACCGTATCAGAAGTGTGTCTTGAAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp CAGGTTGGCAGTCAGTGTCAGTGGGATGTCATCTTCTaGAGGAACTGCACCCTCACTGGGTTTAACCGTCCA +
Preference number: 6 (lower is better)
Translates to: QVGSQCQWDVIF*RNCTLTGFNRP
Trigger: TGGACGGTTAAACCCAGTGAGGGTGCAGTTCCTGCAGAAGATGACATCCCACTGACACTGACTGCCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp AGTGCTGAAGCCTGTTTCGTGAAGGACCTGTTTCTCTaGGTGGAAGGACACAGGGAAGTGGCTGGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: SAEACFVKDLFL*VEGHREVAGVG
Trigger: ACCAACACCAGCCACTTCCCTGTGTCCTTCCACGCAGAGAAACAGGTCCTTCACGAAACAGGCTTCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GTGGTAAGACTTTGCTCTGCAGTCCTGAGATCACTTTaGCCATCTTCCGATGCATGGCCCCCATGGACTCCT +
Preference number: 6 (lower is better)
Translates to: VVRLCSAVLRSL*PSSDAWPPWTP
Trigger: AGGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAAAGTGATCTCAGGACTGCAGAGCAAAGTCTTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GTGAAAACGTGGTCCAGAAAGAGCATGCTGTCTCCTTaGACCAGTTTCCTCTGGTTCTCGAAGGTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: VKTWSRKSMLSP*TSFLWFSKVRE
Trigger: CTCCCGGACCTTCGAGAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CGTCACTATGTCGTCCAGGTTGGCAGTCAGTGTCAGTaGGATGTCATCTTCTGCAGGAACTGCACCCTCACT +
Preference number: 6 (lower is better)
Translates to: RHYVVQVGSQCQ*DVIFCRNCTLT
Trigger: AGTGAGGGTGCAGTTCCTGCAGAAGATGACATCCCACTGACACTGACTGCCAACCTGGACGACATAGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp TGCACAGCTCCCGGGCCCGAATCCCTAGGATGTTGTTaGTGTCTGATAGGGCTTCTAAGACGATGGAGTCAA +
Preference number: 6 (lower is better)
Translates to: CTAPGPESLGCC*CLIGLLRRWSQ
Trigger: TTGACTCCATCGTCTTAGAAGCCCTATCAGACACCAACAACATCCTAGGGATTCGGGCCCGGGAGCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GACTTCCACGCTGACTTCAGTGCCACCCTGGGCTCCTaGGGCTGCGTTAATAACTTTTTCTGTGTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: DFHADFSATLGS*GCVNNFFCVEV
Trigger: GACTTCCACACAGAAAAAGTTATTAACGCAGCCCCAGGAGCCCAGGGTGGCACTGAAGTCAGCGTGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CGTGAAAACGTGGTCCAGAAAGAGCATGCTGTCTCCTaGGACCAGTTTCCTCTGGTTCTCGAAGGTCCGGGA +
Preference number: 6 (lower is better)
Translates to: RENVVQKEHAVS*DQFPLVLEGPG
Trigger: TCCCGGACCTTCGAGAACCAGAGGAAACTGGTCCAAGGAGACAGCATGCTCTTTCTGGACCACGTTTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATGCACAGCTCCCGGGCCCGAATCCCTAGGATGTTGTaGGTGTCTGATAGGGCTTCTAAGACGATGGAGTCA +
Preference number: 6 (lower is better)
Translates to: MHSSRARIPRML*VSDRASKTMES
Trigger: TGACTCCATCGTCTTAGAAGCCCTATCAGACACCAACAACATCCTAGGGATTCGGGCCCGGGAGCTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp CTGACCCACGTCTACGCTACTGTCGGTGGGTGTGAAGTCCAAGTATaGCAACAGGAGTTTTGGTCCAGAGAGCTCTGCCTGGTAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LTHVYATVGGCEVQV*QQEFWSRELCLVAE
Trigger: TTCAGCTACCAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTGGACTTCACACCCACCGACAGTAGCGTAGACGTGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp CTTTGCTCACAGAGAGGCACAGAGGCGGTTAACTGTTaGAGTCTTGCTTCAGGGTCGCATAAGAAGAGCACG +
Preference number: 6 (lower is better)
Translates to: LCSQRGTEAVNC*SLASGSHKKST
Trigger: CGTGCTCTTCTTATGCGACCCTGAAGCAAGACTGCAACAGTTAACCGCCTCTGTGCCTCTCTGTGAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TCTACGCTACTGTCGGTGGGTGTGAAGTCCAAGTATTaGAACAGGAGTTTTGGTCCAGAGAGCTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: STLLSVGVKSKY*NRSFGPESSAW
Trigger: CCAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTGGACTTCACACCCACCGACAGTAGCGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GTTCTCCTCTGGAGTGAAGAGGATTCGGAATACAGATaGCACACCAGGGGCTACCTTGTGGCCGATGTCTTT +
Preference number: 6 (lower is better)
Translates to: VLLWSEEDSEYR*HTRGYLVADVF
Trigger: AAAGACATCGGCCACAAGGTAGCCCCTGGTGTGCCATCTGTATTCCGAATCCTCTTCACTCCAGAGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCAGAACCTTCTGGGTGTTGTACTTCACAGGGCAAGTaGAGAAATTCAGCTCGTCGGGAAAGTCCAGGATGG +
Preference number: 6 (lower is better)
Translates to: AEPSGCCTSQGK*RNSARRESPGW
Trigger: CCATCCTGGACTTTCCCGACGAGCTGAATTTCTCCACTTGCCCTGTGAAGTACAACACCCAGAAGGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCGAGGGATCCAAGACGCTGTCTTCAAGGATCATGCTaGTTTCCTGCTTTTCCTCCTTGTTCAGGCCATCAC +
Preference number: 6 (lower is better)
Translates to: ARDPRRCLQGSC*FPAFPPCSGHH
Trigger: GTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGACAGCGTCTTGGATCCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCCATGCGAACCCGAAATACTGCAGGGATGAAGGACTaGTTAGAGAGCTGGAGAATTCTGGAGGTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: AMRTRNTAGMKD*LESWRILEVSF
Trigger: GAAGGACACCTCCAGAATTCTCCAGCTCTCTAACCAGTCCTTCATCCCTGCAGTATTTCGGGTTCGCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GGGCTCCAAGGTGATGACCTTGGCTTCCTGGAGCTCTaGAATAGAGAACAGGACCGAGTGATTAAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: GLQGDDLGFLEL*NREQDRVIKGE
Trigger: CTCACCTTTAATCACTCGGTCCTGTTCTCTATTCCAGAGCTCCAGGAAGCCAAGGTCATCACCTTGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GAGGCTGATACACTCTGGCGGACTGGGCTTGTCATCTaGATGGTTTTTATAATGCCAGAAGGGGTGACCCTG +
Preference number: 6 (lower is better)
Translates to: EADTLWRTGLVI*MVFIMPEGVTL
Trigger: CAGGGTCACCCCTTCTGGCATTATAAAAACCATCCAGATGACAAGCCCAGTCCGCCAGAGTGTATCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GACGATAGGCACAGGATGCCTTTAGTCTCACCCAGATaGCTGGGCTCAAAGAAGACTTCCACGCTGACTTCA +
Preference number: 6 (lower is better)
Translates to: DDRHRMPLVSPR*LGSKKTSTLTS
Trigger: TGAAGTCAGCGTGGAAGTCTTCTTTGAGCCCAGCCATCTGGGTGAGACTAAAGGCATCCTGTGCCTATCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CACAGAGAGGCACAGAGGCGGTTAACTGTTGCAGTCTaGCTTCAGGGTCGCATAAGAAGAGCACGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: HREAQRRLTVAV*LQGRIRRARLG
Trigger: TCCCAAACGTGCTCTTCTTATGCGACCCTGAAGCAAGACTGCAACAGTTAACCGCCTCTGTGCCTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GTCTACGCTACTGTCGGTGGGTGTGAAGTCCAAGTATaGCAACAGGAGTTTTGGTCCAGAGAGCTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: VYATVGGCEVQV*QQEFWSRELCL
Trigger: CAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTGGACTTCACACCCACCGACAGTAGCGTAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp CTGGGTTCCACGTCAAAGGTGTCAGTGATGCGGTTGGCCGGCTTGTaGGAGATGGGCTTGATGACAATGTTGATGTCACAGGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: LGSTSKVSVMRLAGL*EMGLMTMLMSQEIL
Trigger: CAAGATCTCCTGTGACATCAACATTGTCATCAAGCCCATCTCCAACAAGCCGGCCAACCGCATCACTGACACCTTTGACGTGGAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp ATCTCCAGGATGACCGTGTCTTTGAACGTCACTATGTCGTCCAGGTaGGCAGTCAGTGTCAGTGGGATGTCATCTTCTGCAGGAACTGCA +
Preference number: 6 (lower is better)
Translates to: ISRMTVSLNVTMSSR*AVSVSGMSSSAGTA
Trigger: TGCAGTTCCTGCAGAAGATGACATCCCACTGACACTGACTGCCAACCTGGACGACATAGTGACGTTCAAAGACACGGTCATCCTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp ACTCTATTTTGTTGCACGACAGGGTCATACTTGGGATaGTCACCGTGGCCTGGAGGCAGAGGTGAATGGTTG +
Preference number: 6 (lower is better)
Translates to: TLFCCTTGSYLG*SPWPGGRGEWL
Trigger: CAACCATTCACCTCTGCCTCCAGGCCACGGTGATCATCCCAAGTATGACCCTGTCGTGCAACAAAATAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CGAACTCTCCGATGTCCATTGGCGAGAACTTCACTTTaGGCTTTTGAGTCTTTCCTACGGGCACAACGCCTG +
Preference number: 6 (lower is better)
Translates to: RTLRCPLARTSL*AFESFLRAQRL
Trigger: CAGGCGTTGTGCCCGTAGGAAAGACTCAAAAGCTCAAAGTGAAGTTCTCGCCAATGGACATCGGAGAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp CTCTGCAGTCCTGAGATCACTTTGGCCATCTTCCGATaGATGGCCCCCATGGACTCCTCTAGCCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: LCSPEITLAIFR*MAPMDSSSLLF
Trigger: AAATAAAAGGCTAGAGGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAAAGTGATCTCAGGACTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp AAGTCTTTCCAGCTCCCTCTTCTTTCTCTCCCGGAGTaGCTGCCGAACATCACGGTCAAATGCAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: KSFQLPLLSLPE*LPNITVKCNFL
Trigger: GAGAAAGTTGCATTTGACCGTGATGTTCGGCAGGCACTCCGGGAGAGAAAGAAGAGGGAGCTGGAAAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCAGTCCTGAGATCACTTTGGCCATCTTCCGATGCATaGCCCCCATGGACTCCTCTAGCCTTTTATTTGTCT +
Preference number: 6 (lower is better)
Translates to: AVLRSLWPSSDA*PPWTPLAFYLS
Trigger: AGACAAATAAAAGGCTAGAGGAGTCCATGGGGGCCATGCATCGGAAGATGGCCAAAGTGATCTCAGGACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CTGGACATGAGCACTTATTTCAGCGGTCTCCTCCTCTaGGAGTTCCTCAGCCATCACCTCATATTGATCGAC +
Preference number: 6 (lower is better)
Translates to: LDMSTYFSGLLL*EFLSHHLILID
Trigger: GTCGATCAATATGAGGTGATGGCTGAGGAACTCCCAGAGGAGGAGACCGCTGAAATAAGTGCTCATGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GGCAAACTCTATTTTGTTGCACGACAGGGTCATACTTaGGATGATCACCGTGGCCTGGAGGCAGAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: GKLYFVARQGHT*DDHRGLEAEVN
Trigger: ATTCACCTCTGCCTCCAGGCCACGGTGATCATCCCAAGTATGACCCTGTCGTGCAACAAAATAGAGTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp TGCCAGAAGTGGGTTGGATCTCAAAGATCCGAGACTTaGGAATCATCTCGGCTTGCAGCTTCCGCCGTAAAT +
Preference number: 6 (lower is better)
Translates to: CQKWVGSQRSET*ESSRLAASAVN
Trigger: ATTTACGGCGGAAGCTGCAAGCCGAGATGATTCCCAAGTCTCGGATCTTTGAGATCCAACCCACTTCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CCCCACTCTGTATGGTCTGTAGGATGTGGTACAGGTTaGGGCTGGTGCAGATCTGATGCTCCTCAAATATCA +
Preference number: 6 (lower is better)
Translates to: PHSVWSVGCGTG*GWCRSDAPQIS
Trigger: TGATATTTGAGGAGCATCAGATCTGCACCAGCCCCAACCTGTACCACATCCTACAGACCATACAGAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATGCCAGAAGTGGGTTGGATCTCAAAGATCCGAGACTaGGGAATCATCTCGGCTTGCAGCTTCCGCCGTAAA +
Preference number: 6 (lower is better)
Translates to: MPEVGWISKIRD*GIISACSFRRK
Trigger: TTTACGGCGGAAGCTGCAAGCCGAGATGATTCCCAAGTCTCGGATCTTTGAGATCCAACCCACTTCTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ACGTCAAAGGTGTCAGTGATGCGGTTGGCCGGCTTGTaGGAGATGGGCTTGATGACAATGTTGATGTCACAG +
Preference number: 6 (lower is better)
Translates to: TSKVSVMRLAGL*EMGLMTMLMSQ
Trigger: CTGTGACATCAACATTGTCATCAAGCCCATCTCCAACAAGCCGGCCAACCGCATCACTGACACCTTTGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TCCACGTCAAAGGTGTCAGTGATGCGGTTGGCCGGCTaGTTGGAGATGGGCTTGATGACAATGTTGATGTCA +
Preference number: 6 (lower is better)
Translates to: STSKVSVMRLAG*LEMGLMTMLMS
Trigger: TGACATCAACATTGTCATCAAGCCCATCTCCAACAAGCCGGCCAACCGCATCACTGACACCTTTGACGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TCTTCGGGGCTAATGGAGAAGTGGGGCTTGAGTTTCTaGACATCCCATTTAAACCTTGCACCCACGTCGCCT +
Preference number: 6 (lower is better)
Translates to: SSGLMEKWGLSF*TSHLNLAPTSP
Trigger: AGGCGACGTGGGTGCAAGGTTTAAATGGGATGTCAAGAAACTCAAGCCCCACTTCTCCATTAGCCCCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp TTGACCCTGGGCCAGAAGTGTCAGCTTCTGAGAGCTCTGGCCAATTaGGAACAACAGAGACTGGCTGTAAAGTTTCTCTTCCTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: LTLGQKCQLLRALAN*EQQRLAVKFLFLGH
Trigger: ATGCCCAAGGAAGAGAAACTTTACAGCCAGTCTCTGTTGTTCCAAATTGGCCAGAGCTCTCAGAAGCTGACACTTCTGGCCCAGGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CTACCACCGAGTGGGCTGGCTCAGGGTCCATCTCTATaGCCTTTCGTTTTGTATTCAAGGTCAGAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: LPPSGLAQGPSL*PFVLYSRSEVY
Trigger: ATACACCTCTGACCTTGAATACAAAACGAAAGGTCATAGAGATGGACCCTGAGCCAGCCCACTCGGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp TTTGACTTGAACCTTGACGCTCAGGCATGGCAAAACTaGCTGCCTTGGAGGCTTCTTCTGAGATCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: FDLNLDAQAWQN*LPWRLLLRSSR
Trigger: TCTGCTGGATCTCAGAAGAAGCCTCCAAGGCAGTCAGTTTTGCCATGCCTGAGCGTCAAGGTTCAAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp AGAAAGAATAGGTGCTGTTGGTCGGGTTCAGAATTGTaGAGGTCTGGACATTCTTCCCACCGATGCCCACAC +
Preference number: 6 (lower is better)
Translates to: RKNRCCWSGSEL*RSGHSSHRCPH
Trigger: GTGTGGGCATCGGTGGGAAGAATGTCCAGACCTTCACAATTCTGAACCCGACCAACAGCACCTATTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GGTGGGTGTGAAGTCCAAGTATTGCAACAGGAGTTTTaGTCCAGAGAGCTCTGCCTGGTAGCTGAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: GGCEVQVLQQEF*SRELCLVAEVE
Trigger: TTCAACTTCAGCTACCAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTGGACTTCACACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GAGAATGTTCCCTCAGAGTTTGGAGGCACAGCGAACTaGGAAGGCAGGCTAATGTCACTCAACTTGCATTCT +
Preference number: 6 (lower is better)
Translates to: ENVPSEFGGTAN*EGRLMSLNLHS
Trigger: AGAATGCAAGTTGAGTGACATTAGCCTGCCTTCCCAGTTCGCTGTGCCTCCAAACTCTGAGGGAACATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATGACCGTGTCTTTGAACGTCACTATGTCGTCCAGGTaGGCAGTCAGTGTCAGTGGGATGTCATCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: MTVSLNVTMSSR*AVSVSGMSSSA
Trigger: TGCAGAAGATGACATCCCACTGACACTGACTGCCAACCTGGACGACATAGTGACGTTCAAAGACACGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GCTTGCAGCTTCCGCCGTAAATACTTTGGCATGTGTTaGTCCAGCTTGTTAGTAGACTTTGGGGTGTGGACG +
Preference number: 6 (lower is better)
Translates to: ACSFRRKYFGMC*SSLLVDFGVWT
Trigger: CGTCCACACCCCAAAGTCTACTAACAAGCTGGACAAACACATGCCAAAGTATTTACGGCGGAAGCTGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TGTGTTCATTATGAGAATGCGCCGCGTGGCTTGAGTTaGATACACAACGGGGCCAAAGGGAAGATGCTCTTG +
Preference number: 6 (lower is better)
Translates to: CVHYENAPRGLS*IHNGAKGKMLL
Trigger: CAAGAGCATCTTCCCTTTGGCCCCGTTGTGTATCAAACTCAAGCCACGCGGCGCATTCTCATAATGAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp AGTTCTCAGTGCTTAGTCGTGCTGGTACCACAGTATTTTGGGTCATaGAAGACTCATGAGCTGACTCCTCTGCTTCCCTCATGGACTGCT +
Preference number: 6 (lower is better)
Translates to: SSQCLVVLVPQYFGS*KTHELTPLLPSWTA
Trigger: AGCAGTCCATGAGGGAAGCAGAGGAGTCAGCTCATGAGTCTTCAATGACCCAAAATACTGTGGTACCAGCACGACTAAGCACTGAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp CGCCCTTTTGTTATCAAAATAGGACCTTGTTCTCCAAGTGGGAGGTaGGGAATTTGGCAGTACAAGGAGCTCTCGAACTCTCCGATGTCC +
Preference number: 6 (lower is better)
Translates to: RPFVIKIGPCSPSGR*GIWQYKELSNSPMS
Trigger: GGACATCGGAGAGTTCGAGAGCTCCTTGTACTGCCAAATTCCCAACCTCCCACTTGGAGAACAAGGTCCTATTTTGATAACAAAAGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TCCAAGACGCTGTCTTCAAGGATCATGCTGGTTTCCTaGTTTTCCTCCTTGTTCAGGCCATCACAGATCTTG +
Preference number: 6 (lower is better)
Translates to: SKTLSSRIMLVS*FSSLFRPSQIL
Trigger: CAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGACAGCGTCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp CAAGTATTGCAACAGGAGTTTTGGTCCAGAGAGCTCTaGCTGGTAGCTGAAGTTGAACTTGCCCGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: QVLQQEFWSREL*LVAEVELARVD
Trigger: ATCAACACGGGCAAGTTCAACTTCAGCTACCAGGCAGAGCTCTCTGGACCAAAACTCCTGTTGCAATACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCAGTACAAGGAGCTCTCGAACTCTCCGATGTCCATTaGCGAGAACTTCACTTTGAGCTTTTGAGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: AVQGALELSDVH*RELHFELLSLS
Trigger: GGAAAGACTCAAAAGCTCAAAGTGAAGTTCTCGCCAATGGACATCGGAGAGTTCGAGAGCTCCTTGTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GCACAGCCTAAGATGTTGCATACGAATGTTGGGCCATaGCTGATCTTGATTTTGAGTTCCAGGCCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: AQPKMLHTNVGP*LILILSSRPFK
Trigger: CTTGAAGGGCCTGGAACTCAAAATCAAGATCAGCCATGGCCCAACATTCGTATGCAACATCTTAGGCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GTCAGTCTCCCGCATAGTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAATGTTCCCTCAGAGTTTGGA +
Preference number: 6 (lower is better)
Translates to: VSLPHSSPAFRG*NSNENVPSEFG
Trigger: TCCAAACTCTGAGGGAACATTCTCATTTGAATTCCAGCCCCTGAAAGCTGGAGAACTATGCGGGAGACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATTGGAGATGCTTCTCTGGTGTTCCAGGGCATAGTCTaGGACTATGAGTCGCTCTACTTCCATCTGGACATG +
Preference number: 6 (lower is better)
Translates to: IGDASLVFQGIV*DYESLYFHLDM
Trigger: CATGTCCAGATGGAAGTAGAGCGACTCATAGTCCAAGACTATGCCCTGGAACACCAGAGAAGCATCTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp CTGTTTGCTTCCCTTAGGTGGAGAGGGTTGTTCCTCTaGAGCCTTGGTTATGATGGTGTTGAGGAAGATGTC +
Preference number: 6 (lower is better)
Translates to: LFASLRWRGLFL*SLGYDGVEEDV
Trigger: GACATCTTCCTCAACACCATCATAACCAAGGCTCAAGAGGAACAACCCTCTCCACCTAAGGGAAGCAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp ATCATCTCGGCTTGCAGCTTCCGCCGTAAATACTTTGGCATGTGTTaGTCCAGCTTGTTAGTAGACTTTGGGGTGTGGACGAACCATTCA +
Preference number: 6 (lower is better)
Translates to: IISACSFRRKYFGMC*SSLLVDFGVWTNHS
Trigger: TGAATGGTTCGTCCACACCCCAAAGTCTACTAACAAGCTGGACAAACACATGCCAAAGTATTTACGGCGGAAGCTGCAAGCCGAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp GGTGAAGCTCACATTGTAGCTGATTCCAATATGACAGTACCCAAATaGGATGTGTTCCATCAGGGCAGCTGTCACCAAGTCCTCCATGGT +
Preference number: 6 (lower is better)
Translates to: GEAHIVADSNMTVPK*DVFHQGSCHQVLHG
Trigger: ACCATGGAGGACTTGGTGACAGCTGCCCTGATGGAACACATCCAATTTGGGTACTGTCATATTGGAATCAGCTACAATGTGAGCTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp TGTTTGCTTCCCTTAGGTGGAGAGGGTTGTTCCTCTTaGGCCTTGGTTATGATGGTGTTGAGGAAGATGTCT +
Preference number: 6 (lower is better)
Translates to: CLLPLGGEGCSS*ALVMMVLRKMS
Trigger: AGACATCTTCCTCAACACCATCATAACCAAGGCTCAAGAGGAACAACCCTCTCCACCTAAGGGAAGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp ATAGAGAAAGTCCAGAACTCTTCCGTGATGTCCAGGTaGGCCGGCAGGAACTGGAATATAATCTCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: IEKVQNSSVMSR*AGRNWNIISAF
Trigger: GAAAGCTGAGATTATATTCCAGTTCCTGCCGGCTCACCTGGACATCACGGAAGAGTTCTGGACTTTCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp AAGGGATTTCTTGTTTGCCATGCGAACCCGAAATACTaGAGGGATGAAGGACTGGTTAGAGAGCTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: KGFLVCHANPKY*RDEGLVRELEN
Trigger: ATTCTCCAGCTCTCTAACCAGTCCTTCATCCCTGCAGTATTTCGGGTTCGCATGGCAAACAAGAAATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp GGTATCCAGGCTAAAATGCGCTCCCAAGTTGAGTTCTaGAGCAAATGGTTTGTCGGAAACAATGGTAGAACC +
Preference number: 6 (lower is better)
Translates to: GIQAKMRSQVEF*SKWFVGNNGRT
Trigger: GGTTCTACCATTGTTTCCGACAAACCATTTGCTCCAGAACTCAACTTGGGAGCGCATTTTAGCCTGGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp TTTCACTCTCTCGGGTTCTTCCATGCCTCATGTGGCTaGTTATCTTCTTTTGAAGAATTGGACTCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: FHSLGFFHASCG*LSSFEELDSPL
Trigger: CAGGGGAGAGTCCAATTCTTCAAAAGAAGATAACCAGCCACATGAGGCATGGAAGAACCCGAGAGAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CAATTCTCGGTAATTTTCTTCTACCACCGAGTGGGCTaGCTCAGGGTCCATCTCTATGACCTTTCGTTTTGT +
Preference number: 6 (lower is better)
Translates to: QFSVIFFYHRVG*LRVHLYDLSFC
Trigger: ACAAAACGAAAGGTCATAGAGATGGACCCTGAGCCAGCCCACTCGGTGGTAGAAGAAAATTACCGAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TCTTCGGGTCCAGCTTCGTCATCCATAAGGATCGTCTaGATGGAATCACTGAAGTCCATCTCCGTATACTCT +
Preference number: 6 (lower is better)
Translates to: SSGPASSSIRIV*MESLKSISVYS
Trigger: AGAGTATACGGAGATGGACTTCAGTGATTCCATCAAGACGATCCTTATGGATGACGAAGCTGGACCCGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATCTTTAATTCTATCTTGGCAACTGCAGCAAGCTGCTaGTTTGTGGCGCCTTGTGCTTTCTTTAGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: IFNSILATAASC*FVAPCAFFRGG
Trigger: GCCACCCCTAAAGAAAGCACAAGGCGCCACAAACAAGCAGCTTGCTGCAGTTGCCAAGATAGAATTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp TGCTTTTCCTCCTTGTTCAGGCCATCACAGATCTTGTATTTTTCTTaGTCTTCCTCTTCTTCGGTGGCAAACACCTTCCACTGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: CFSSLFRPSQILYFS*SSSSSVANTFHWKW
Trigger: CCACTTCCAGTGGAAGGTGTTTGCCACCGAAGAAGAGGAAGACAAAGAAAAATACAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CCTCATAGACTTCACAGGGAGAATAGTTCTGGAATATaGTTTCAGACGGAAAGGGCTGGAACAAGGCCTGAT +
Preference number: 6 (lower is better)
Translates to: PHRLHRENSSGI*FQTERAGTRPD
Trigger: ATCAGGCCTTGTTCCAGCCCTTTCCGTCTGAAATCATATTCCAGAACTATTCTCCCTGTGAAGTCTATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp AAAACTTTGCCAATGTCCAGTAATTCGAAGTTGAAGTaGAGCTTGGGCCCCATTCCTTCTCCTCTGATTCGG +
Preference number: 6 (lower is better)
Translates to: KTLPMSSNSKLK*SLGPIPSPLIR
Trigger: CCGAATCAGAGGAGAAGGAATGGGGCCCAAGCTTCACTTCAACTTCGAATTACTGGACATTGGCAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp GCAGGACCTTATAGCATCCAGGAAGGTCATCATGATTaGCAAGCTGGATGGTCTTCTCATATGGGTACTTCA +
Preference number: 6 (lower is better)
Translates to: AGPYSIQEGHHD*QAGWSSHMGTS
Trigger: TGAAGTACCCATATGAGAAGACCATCCAGCTTGTCAATCATGATGACCTTCCTGGATGCTATAAGGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp CTGGTTTGCTATGTTCGTGTCTTTCTGGACTGTGTCTaGGAACTTGGCCATTTTAGTTGCTCCAGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: LVCYVRVFLDCV*ELGHFSCSRLV
Trigger: TACAAGCCTGGAGCAACTAAAATGGCCAAGTTCTCAGACACAGTCCAGAAAGACACGAACATAGCAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TTCGGTGATCTGCGGTCGACATATAATTCTTGTACTTaGCAATTTCTGCTCCGTGGTGAGGGACATCTCTTT +
Preference number: 6 (lower is better)
Translates to: FGDLRSTYNSCT*QFLLRGEGHLF
Trigger: AAAGAGATGTCCCTCACCACGGAGCAGAAATTGGCAAGTACAAGAATTATATGTCGACCGCAGATCACCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp TCCATCTTTAATTCTATCTTGGCAACTGCAGCAAGCTaGTTGTTTGTGGCGCCTTGTGCTTTCTTTAGGGGT +
Preference number: 6 (lower is better)
Translates to: SIFNSILATAAS*LFVAPCAFFRG
Trigger: ACCCCTAAAGAAAGCACAAGGCGCCACAAACAAGCAGCTTGCTGCAGTTGCCAAGATAGAATTAAAGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GTTATCAAAATAGGACCTTGTTCTCCAAGTGGGAGGTaGGGAATTTGGCAGTACAAGGAGCTCTCGAACTCT +
Preference number: 6 (lower is better)
Translates to: VIKIGPCSPSGR*GIWQYKELSNS
Trigger: AGAGTTCGAGAGCTCCTTGTACTGCCAAATTCCCAACCTCCCACTTGGAGAACAAGGTCCTATTTTGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp ATGCTGGTTTCCTGCTTTTCCTCCTTGTTCAGGCCATCACAGATCTaGTATTTTTCTTTGTCTTCCTCTTCTTCGGTGGCAAACACCTTC +
Preference number: 6 (lower is better)
Translates to: MLVSCFSSLFRPSQI*YFSLSSSSSVANTF
Trigger: GAAGGTGTTTGCCACCGAAGAAGAGGAAGACAAAGAAAAATACAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp TTCTCCACAATGAAGGAGAAGCTTGTTGCATGCAAGAAGACATTCTaGAAGGGGATGATGATGTTGTATCCGGCTCTGATTAGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: FSTMKEKLVACKKTF*KGMMMLYPALIRKG
Trigger: TCCCTTCCTAATCAGAGCCGGATACAACATCATCATCCCCTTCAAGAATGTCTTCTTGCATGCAACAAGCTTCTCCTTCATTGTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp TCCTCCTCTGGGAGTTCCTCAGCCATCACCTCATATTaGTCGACAGCCTCATATTTAGTGTACTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SSSGSSSAITSY*STASYLVYSFS
Trigger: AGAAAAAGAGTACACTAAATATGAGGCTGTCGATCAATATGAGGTGATGGCTGAGGAACTCCCAGAGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp GTAAGTGCGTCGTTTTTCCTTCTGAGTTTCCCGCACTaGCTCTGGTTTGTCTTTCAATTTCTGTTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: VSASFFLLSFPH*LWFVFQFLFAS
Trigger: GGAAGCAAACAGAAATTGAAAGACAAACCAGAGCAAGTGCGGGAAACTCAGAAGGAAAAACGACGCACTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp AAGACGCTGTCTTCAAGGATCATGCTGGTTTCCTGCTTTTCCTCCTaGTTCAGGCCATCACAGATCTTGTATTTTTCTTTGTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: KTLSSRIMLVSCFSS*FRPSQILYFSLSSS
Trigger: AGAGGAAGACAAAGAAAAATACAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGACAGCGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp TTTTTGATTTCTTCGGGTCCAGCTTCGTCATCCATAAGGATCGTCTaGATGGAATCACTGAAGTCCATCTCCGTATACTCTACAGTGTGT +
Preference number: 6 (lower is better)
Translates to: FLISSGPASSSIRIV*MESLKSISVYSTVC
Trigger: ACACACTGTAGAGTATACGGAGATGGACTTCAGTGATTCCATCAAGACGATCCTTATGGATGACGAAGCTGGACCCGAAGAAATCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS GCA 72 bp ATCCTTCAGACACATGTCGTAGATTTTAAACTTTTGTaGCAGGTTCTTGTCAGAGTCCTTCAGGAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: ILQTHVVDFKLL*QVLVRVLQEVS
Trigger: GGAGACTTCCTGAAGGACTCTGACAAGAACCTGGCACAAAAGTTTAAAATCTACGACATGTGTCTGAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp CTTGGGAAATTGGAATTAAGAGTGGGTATTCGGTCATaGCTTTCTTCTTCCTGGTGGTTTCTTCAAGTGTTG +
Preference number: 6 (lower is better)
Translates to: LGKLELRVGIRS*LSSSWWFLQVL
Trigger: CAACACTTGAAGAAACCACCAGGAAGAAGAAAGCCATGACCGAATACCCACTCTTAATTCCAATTTCCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp ATGAAGGAGAAGCTTGTTGCATGCAAGAAGACATTCTaGAAGGGGATGATGATGTTGTATCCGGCTCTGATT +
Preference number: 6 (lower is better)
Translates to: MKEKLVACKKTF*KGMMMLYPALI
Trigger: AATCAGAGCCGGATACAACATCATCATCCCCTTCAAGAATGTCTTCTTGCATGCAACAAGCTTCTCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 90 bp CTGACAGAAACTTTCCTTTCTATTGATTCCATCTTTAATTCTATCTaGGCAACTGCAGCAAGCTGCTTGTTTGTGGCGCCTTGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LTETFLSIDSIFNSI*ATAASCLFVAPCAF
Trigger: GAAAGCACAAGGCGCCACAAACAAGCAGCTTGCTGCAGTTGCCAAGATAGAATTAAAGATGGAATCAATAGAAAGGAAAGTTTCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TCTTCAAGGATCATGCTGGTTTCCTGCTTTTCCTCCTaGTTCAGGCCATCACAGATCTTGTATTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SSRIMLVSCFSS*FRPSQILYFSL
Trigger: CAAAGAAAAATACAAGATCTGTGATGGCCTGAACAAGGAGGAAAAGCAGGAAACCAGCATGATCCTTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TTCTTTGCTTGTTCCAAGAAGTGTTCATACTTTTCATaGCCTTGGAGGTTCCTGTGTAGGTCAAGGCTGATT +
Preference number: 6 (lower is better)
Translates to: FFACSKKCSYFS*PWRFLCRSRLI
Trigger: AATCAGCCTTGACCTACACAGGAACCTCCAAGGCAATGAAAAGTATGAACACTTCTTGGAACAAGCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS TCA 72 bp TCTTCCTGGTGGTTTCTTCAAGTGTTGCGTGCTCTCTaGCAGAAACTTTCCTTTCTATTGATTCCATCTTTA +
Preference number: 6 (lower is better)
Translates to: SSWWFLQVLRAL*QKLSFLLIPSL
Trigger: TAAAGATGGAATCAATAGAAAGGAAAGTTTCTGTCAGAGAGCACGCAACACTTGAAGAAACCACCAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CCA 72 bp AGATCTTGTATTTTTCTTTGTCTTCCTCTTCTTCGGTaGCAAACACCTTCCACTGGAAGTGGGCAATTATAT +
Preference number: 6 (lower is better)
Translates to: RSCIFLCLPLLR*QTPSTGSGQLY
Trigger: ATATAATTGCCCACTTCCAGTGGAAGGTGTTTGCCACCGAAGAAGAGGAAGACAAAGAAAAATACAAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7
CDS CAA 72 bp TACAAACAATCTAGGCTCATAGATGTTTCTTCTTTGTaGGTGACAACGAGGATTTGCTTATATGGAGGCATC +
Preference number: 6 (lower is better)
Translates to: YKQSRLIDVSSL*VTTRICLYGGI
Trigger: GATGCCTCCATATAAGCAAATCCTCGTTGTCACCAACAAAGAAGAAACATCTATGAGCCTAGATTGTTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043141.7