Pregenerated sensors for HYAL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029678Ensembl transcript IDs: ENSMUST00000031689.6, ENSMUST00000200968.4
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCTCGAACACACGCCTTaGTTCTGGCAAAGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWLEHTP*FWQRVW Trigger: CCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGGAAACAAGACTCAGTTaGGGCATTCCAGGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWETRLS*GIPGPE Trigger: CTCTGGGCCTGGAATGCCCCAACTGAGTCTTGTTTC...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCACATCAGGGATAAGTaGGGGTGCCCTAAAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWHIRDK*GCPKIH Trigger: GTGGATTTTAGGGCACCCCCACTTATCCCTGATGTG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGATTCTTCCCAATCAATaGCAGCCAGGCCCACATTGT | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWILPNQ*QPGPHC Trigger: ACAATGTGGGCCTGGCTGTCATTGATTGGGAAGAAT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCAACGAGATACCCACTaGCATCTTTTCTTGGCACAC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWQRDTH*HLFLAH Trigger: GTGTGCCAAGAAAAGATGTCAGTGGGTATCTCGTTG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGAATATTGTGACAGGTTaGCCCGTGGCACTTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWNIVTG*PVALFL Trigger: CAGAAAAAGTGCCACGGGTCAACCTGTCACAATATT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCACTATAAAATATTGTaGCAGGTTGACCCGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWHYKIL*QVDPWH Trigger: GTGCCACGGGTCAACCTGTCACAATATTTTATAGTG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCTTGTACACGATTTCTaGCATACAGTGCTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWLVHDF*HTVLLV Trigger: CACAAGCAGCACTGTATGTCAGAAATCGTGTACAAG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR GCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTCTCAAGGGTGGGATTaGCACGGATTTCATACTTTC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWSQGWD*HGFHTF Trigger: GAAAGTATGAAATCCGTGGCAATCCCACCCTTGAGA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR GCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGGGTGGGCAAAACAGCTaGAACGGAATTTTTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWGGQNS*NGIFGK Trigger: TTTCCCAAAAATTCCGTTGCAGCTGTTTTGCCCACC...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTTCTGGCAAAGGGTTTaGCTACACATTTTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWFWQRV*LHILAA Trigger: TGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGGCCCACATTGTCTATTaGCATGTAATGCAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWAHIVY*HVMQDV Trigger: GACATCTTGCATTACATGCCAATAGACAATGTGGGC...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCTTCAAATAAATGGATaGGTACAGGGCTGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWLQING*VQGCAF Trigger: GAAAGCACAGCCCTGTACCCATCCATTTATTTGAAG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTACTCTTCAAATAAATaGATGGGTACAGGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWYSSNK*MGTGLC Trigger: GCACAGCCCTGTACCCATCCATTTATTTGAAGAGTA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGACTGACATCTTTTCTTaGCACACATGGACTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWTDIFS*HTWTHC Trigger: ACAGTGAGTCCATGTGTGCCAAGAAAAGATGTCAGT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTTAGCTACTTCCAAATaGGATTTTAGAGACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWLATSK*DFRDTS Trigger: GCTGGTGTCTCTAAAATCTCATTTGGAAGTAGCTAA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCACAAAAATAGGAAGTaGATTTCGAGGGTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWHKNRK*ISRVFD Trigger: GTCAAAGACCCTCGAAATCCACTTCCTATTTTTGTG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCTGCAACGGAATTTTTaGGAAAAGTATAGCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWLQRNF*EKYSRF Trigger: GAACCTGCTATACTTTTCCCAAAAATTCCGTTGCAG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR TCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGAAATTACAAGGGAATTaGTGCAAATGTCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWKLQGN*CKCLPE Trigger: CTCTGGAAGACATTTGCATCAATTCCCTTGTAATTT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR GCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTTCCATAAAATGTCTTaGTGCCTCTTCAAACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWFHKMS*CLFKLF Trigger: GAAGAGTTTGAAGAGGCAGCAAGACATTTTATGGAA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR GCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGAGAGCATCATTTCTGTaGTTTTCTATATCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWRASFL*FSISGH Trigger: ATGCCCTGATATAGAAAAGCACAGAAATGATGCTCT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTCCTATAAATATCCTTaGGTTTCCAATTTCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWSYKYP*VSNFLP Trigger: GGGCAAGAAATTGGAAACCCAAGGATATTTATAGGA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR GCA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGCATAAAATGTCTTGCTaGCTCTTCAAACTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PDYLDGIIFERWCPVFEWHKMSC*LFKLFF Trigger: AAAGAAGAGTTTGAAGAGGCAGCAAGACATTTTATG...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS GCA 90 bp | GGCATTCCAGGCCCAGAGGAAAGGCACATCAGGGATAAGTGGGGGTaGCCTAAAATCCACAGTCAAGTAGCACGGAATCAGAAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GIPGPEERHIRDKWG*PKIHSQVARNQKED Trigger: GTCTTCCTTCTGATTCCGTGCTACTTGACTGTGGATTTTAGGGCACCCCCACTTATCCCTGATGTGCCTTTCCTCTGGGCCTGGAATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 90 bp | ACAGTGCTGCTTGTGGGGATGACTTCAAGCTACTCTTCAAATAAATaGATGGGTACAGGGCTGTGCTTTCCTCCCATATCCAGAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: TVLLVGMTSSYSSNK*MGTGLCFPPISRRE Trigger: CTCTCTTCTGGATATGGGAGGAAAGCACAGCCCTGTACCCATCCATTTATTTGAAGAGTAGCTTGAAGTCATCCCCACAAGCAGCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 90 bp | TTTCTGGGGCTTCCTACTAAAGAGAACAGACCAAGATCTAGTGGCTaGTTAAACCTTGTGAAACAAGACTCAGTTGGGGCATTCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: FLGLPTKENRPRSSG*LNLVKQDSVGAFQA Trigger: GGCCTGGAATGCCCCAACTGAGTCTTGTTTCACAAGGTTTAATCAGCCACTAGATCTTGGTCTGTTCTCTTTAGTAGGAAGCCCCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 90 bp | GTACACACACTGACAGTGCTAACACTTTCTATGTCAGCTCTCTCCTaGCAGTTCAGGTGGGCAAAACAGCTGCAACGGAATTTTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: VHTLTVLTLSMSALS*QFRWAKQLQRNFWE Trigger: TTCCCAAAAATTCCGTTGCAGCTGTTTTGCCCACCTGAACTGTCAGGAGAGAGCTGACATAGAAAGTGTTAGCACTGTCAGTGTGTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 90 bp | GGCTTCTTGTACACGATTTCTGACATACAGTGCTGCTTGTGGGGATaGCTTCAAGCTACTCTTCAAATAAATGGATGGGTACAGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GFLYTISDIQCCLWG*LQATLQINGWVQGC Trigger: ACAGCCCTGTACCCATCCATTTATTTGAAGAGTAGCTTGAAGTCATCCCCACAAGCAGCACTGTATGTCAGAAATCGTGTACAAGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS GCA 90 bp | ACACACGCCTTGATTCTGGCAAAGGGTTTGGCTACACATTTTGGCTaGAAGGGTGACGTTGATGATATAAGGATTCAGGATGGTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: THALILAKGLATHFG*KGDVDDIRIQDGLQ Trigger: TTGAAGACCATCCTGAATCCTTATATCATCAACGTCACCCTTGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 90 bp | CCGCCATTCTTCCCAATCAATGACAGCCAGGCCCACATTGTCTATTaGCATGTAATGCAAGATGTCAGTCTTAGCTACTTCCAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: PPFFPINDSQAHIVY*HVMQDVSLSYFQMR Trigger: TCTCATTTGGAAGTAGCTAAGACTGACATCTTGCATTACATGCCAATAGACAATGTGGGCCTGGCTGTCATTGATTGGGAAGAATGGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS GCA 90 bp | ATGACTTCAAGCTACTCTTCAAATAAATGGATGGGTACAGGGCTGTaGTTTCCTCCCATATCCAGAAGAGAGCATCATTTCTGTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: MTSSYSSNKWMGTGL*FPPISRREHHFCAF Trigger: AAAAGCACAGAAATGATGCTCTCTTCTGGATATGGGAGGAAAGCACAGCCCTGTACCCATCCATTTATTTGAAGAGTAGCTTGAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGGTTTGGCTACACATTTaGGCTGCAAGGGTGACGTTG | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWVWLHI*AARVTL Trigger: CAACGTCACCCTTGCAGCCAAAATGTGTAGCCAAAC...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGATTCTGGCAAAGGGTTaGGCTACACATTTTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWILAKG*ATHFGC Trigger: GCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAAT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTCTTCAAACTCTTCTTaGGCCCACTTGACAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWSSNSS*AHLTAS Trigger: AGAAGCTGTCAAGTGGGCCAAAGAAGAGTTTGAAGA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTTCTCAAGGGTGGGATaGCCACGGATTTCATACTTT | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWFSRVG*PRISYF Trigger: AAAGTATGAAATCCGTGGCAATCCCACCCTTGAGAA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGTCTTCTTTGGCCCACTaGACAGCTTCTGTGAAATTA | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWSSLAH*TASVKL Trigger: TAATTTCACAGAAGCTGTCAAGTGGGCCAAAGAAGA...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTATTTAGATGGAATTATTTTTGAAAGGTGGTGTCCAGTTTTTGAGTGGAGGTACCCAGAGCAATaGTTTCACCAATTGTATTCA | + |
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Preference number: 5 (lower is better) Translates to: PDYLDGIIFERWCPVFEWRYPEQ*FHQLYS Trigger: TGAATACAATTGGTGAAACAATTGCTCTGGGTACCT...CCACTCAAAAACTGGACACCACCTTTCAAAAATAATTCCATCTAAATAATCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200968.4 |
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| CDS GCA 72 bp | GGCCCAGAGGAAAGGCACATCAGGGATAAGTGGGGGTaGCCTAAAATCCACAGTCAAGTAGCACGGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: GPEERHIRDKWG*PKIHSQVARNQ Trigger: CTGATTCCGTGCTACTTGACTGTGGATTTTAGGGCACCCCCACTTATCCCTGATGTGCCTTTCCTCTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 72 bp | ATTCCAGGCCCAGAGGAAAGGCACATCAGGGATAAGTaGGGGTGCCCTAAAATCCACAGTCAAGTAGCACGG | + |
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Preference number: 6 (lower is better) Translates to: IPGPEERHIRDK*GCPKIHSQVAR Trigger: CCGTGCTACTTGACTGTGGATTTTAGGGCACCCCCACTTATCCCTGATGTGCCTTTCCTCTGGGCCTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 72 bp | CTTCCTCGAACACACGCCTTGATTCTGGCAAAGGGTTaGGCTACACATTTTGGCTGCAAGGGTGACGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LPRTHALILAKG*ATHFGCKGDVD Trigger: ATCAACGTCACCCTTGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 90 bp | ATTCCAATCCTTCCTCGAACACACGCCTTGATTCTGGCAAAGGGTTaGGCTACACATTTTGGCTGCAAGGGTGACGTTGATGATATAAGG | + |
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Preference number: 6 (lower is better) Translates to: IPILPRTHALILAKG*ATHFGCKGDVDDIR Trigger: CCTTATATCATCAACGTCACCCTTGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAGGAAGGATTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 90 bp | GTGGAGATAGTCATTAGAATTCCAATCCTTCCTCGAACACACGCCTaGATTCTGGCAAAGGGTTTGGCTACACATTTTGGCTGCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VEIVIRIPILPRTHA*ILAKGLATHFGCKG Trigger: ACCCTTGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAGGAAGGATTGGAATTCTAATGACTATCTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 72 bp | CTTGTGGGGATGACTTCAAGCTACTCTTCAAATAAATaGATGGGTACAGGGCTGTGCTTTCCTCCCATATCC | + |
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Preference number: 6 (lower is better) Translates to: LVGMTSSYSSNK*MGTGLCFPPIS Trigger: GGATATGGGAGGAAAGCACAGCCCTGTACCCATCCATTTATTTGAAGAGTAGCTTGAAGTCATCCCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 72 bp | GTCATTAGAATTCCAATCCTTCCTCGAACACACGCCTaGATTCTGGCAAAGGGTTTGGCTACACATTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VIRIPILPRTHA*ILAKGLATHFG Trigger: GCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAGGAAGGATTGGAATTCTAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 72 bp | TCATTAGAATTCCAATCCTTCCTCGAACACACGCCTTaGTTCTGGCAAAGGGTTTGGCTACACATTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLEFQSFLEHTP*FWQRVWLHILA Trigger: AGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAAGGCGTGTGTTCGAGGAAGGATTGGAATTCTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS GCA 72 bp | AGCTACTCTTCAAATAAATGGATGGGTACAGGGCTGTaGTTTCCTCCCATATCCAGAAGAGAGCATCATTTC | + |
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Preference number: 6 (lower is better) Translates to: SYSSNKWMGTGL*FPPISRREHHF Trigger: GAAATGATGCTCTCTTCTGGATATGGGAGGAAAGCACAGCCCTGTACCCATCCATTTATTTGAAGAGTAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 72 bp | TTCCCAATCAATGACAGCCAGGCCCACATTGTCTATTaGCATGTAATGCAAGATGTCAGTCTTAGCTACTTC | + |
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Preference number: 6 (lower is better) Translates to: FPINDSQAHIVY*HVMQDVSLSYF Trigger: GAAGTAGCTAAGACTGACATCTTGCATTACATGCCAATAGACAATGTGGGCCTGGCTGTCATTGATTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 72 bp | CTTCCTACTAAAGAGAACAGACCAAGATCTAGTGGCTaGTTAAACCTTGTGAAACAAGACTCAGTTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPTKENRPRSSG*LNLVKQDSVGA Trigger: TGCCCCAACTGAGTCTTGTTTCACAAGGTTTAATCAGCCACTAGATCTTGGTCTGTTCTCTTTAGTAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS GCA 72 bp | CTTATTCCTATAAATATCCTTGGGTTTCCAATTTCTTaGCCAGGTAGGCCGCCATTCTTCCCAATCAATGAC | + |
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Preference number: 6 (lower is better) Translates to: LIPINILGFPIS*PGRPPFFPIND Trigger: GTCATTGATTGGGAAGAATGGCGGCCTACCTGGGCAAGAAATTGGAAACCCAAGGATATTTATAGGAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS GCA 72 bp | TTGATTCTGGCAAAGGGTTTGGCTACACATTTTGGCTaGAAGGGTGACGTTGATGATATAAGGATTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LILAKGLATHFG*KGDVDDIRIQD Trigger: ATCCTGAATCCTTATATCATCAACGTCACCCTTGCAGCCAAAATGTGTAGCCAAACCCTTTGCCAGAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS TCA 72 bp | TACACGATTTCTGACATACAGTGCTGCTTGTGGGGATaGCTTCAAGCTACTCTTCAAATAAATGGATGGGTA | + |
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Preference number: 6 (lower is better) Translates to: YTISDIQCCLWG*LQATLQINGWV Trigger: TACCCATCCATTTATTTGAAGAGTAGCTTGAAGTCATCCCCACAAGCAGCACTGTATGTCAGAAATCGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CCA 72 bp | GGAATTTTTGGGAAAAGTATAGCAGGTTCTCAAGGGTaGGATTGCCACGGATTTCATACTTTCCATGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GIFGKSIAGSQG*DCHGFHTFHVS Trigger: TGAAACATGGAAAGTATGAAATCCGTGGCAATCCCACCCTTGAGAACCTGCTATACTTTTCCCAAAAATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 90 bp | TCCATAAAATGTCTTGCTGCCTCTTCAAACTCTTCTTTGGCCCACTaGACAGCTTCTGTGAAATTAAGTAGTATATTTTGTTGCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: SIKCLAASSNSSLAH*TASVKLSSIFCCWT Trigger: GGTCCAGCAACAAAATATACTACTTAATTTCACAGAAGCTGTCAAGTGGGCCAAAGAAGAGTTTGAAGAGGCAGCAAGACATTTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 90 bp | CCCACATTACCATTCCAGAGGTACCCAGAGCAATTGTTTCACCAATaGTATTCACAAGGTCATCCTCATATAGATATTGGTAAGTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: PTLPFQRYPEQLFHQ*YSQGHPHIDIGKLG Trigger: ACCTAACTTACCAATATCTATATGAGGATGACCTTGTGAATACAATTGGTGAAACAATTGCTCTGGGTACCTCTGGAATGGTAATGTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 72 bp | TCCATAAAATGTCTTGCTGCCTCTTCAAACTCTTCTTaGGCCCACTTGACAGCTTCTGTGAAATTAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SIKCLAASSNSS*AHLTASVKLSS Trigger: ACTACTTAATTTCACAGAAGCTGTCAAGTGGGCCAAAGAAGAGTTTGAAGAGGCAGCAAGACATTTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 72 bp | CCATTCCAGAGGTACCCAGAGCAATTGTTTCACCAATaGTATTCACAAGGTCATCCTCATATAGATATTGGT | + |
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Preference number: 6 (lower is better) Translates to: PFQRYPEQLFHQ*YSQGHPHIDIG Trigger: ACCAATATCTATATGAGGATGACCTTGTGAATACAATTGGTGAAACAATTGCTCTGGGTACCTCTGGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 90 bp | ACAATGCGAAAATACACAAAAATAGGAAGTGGATTTCGAGGGTCTTaGACTTTAGACACTCGAATGGCTTCTTGTACACGATTTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: TMRKYTKIGSGFRGS*TLDTRMASCTRFLT Trigger: TGTCAGAAATCGTGTACAAGAAGCCATTCGAGTGTCTAAAGTCAAAGACCCTCGAAATCCACTTCCTATTTTTGTGTATTTTCGCATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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| CDS CAA 72 bp | TGTCTTGCTGCCTCTTCAAACTCTTCTTTGGCCCACTaGACAGCTTCTGTGAAATTAAGTAGTATATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CLAASSNSSLAH*TASVKLSSIFC Trigger: ACAAAATATACTACTTAATTTCACAGAAGCTGTCAAGTGGGCCAAAGAAGAGTTTGAAGAGGCAGCAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031689.6 ENSMUST00000200968.4 |
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