Pregenerated sensors for HYAL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029680Ensembl transcript IDs: ENSMUST00000031691.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTTCAAATGGATTCTAAATCCAAGTATACTACTCAAAATGATATaGGCAGCAGAGGAAGGCAGAGTAGCTGATTTTCCTTATAACTTA | + |
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Preference number: 1 (lower is better) Translates to: RFKWILNPSILLKMI*AAEEGRVADFPYNL Trigger: TAAGTTATAAGGAAAATCAGCTACTCTGCCTTCCTCTGCTGCCCATATCATTTTGAGTAGTATACTTGGATTTAGAATCCATTTGAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR CAA 90 bp | GGCCATGGAAGGAAACAGCTTGACTTCTCTTTGGTGACCAAGAGATaGTCCTGCATCCCTTACATCACTAAGAACCCAGGAGTGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GHGRKQLDFSLVTKR*SCIPYITKNPGVQS Trigger: GCTCTGCACTCCTGGGTTCTTAGTGATGTAAGGGATGCAGGACAATCTCTTGGTCACCAAAGAGAAGTCAAGCTGTTTCCTTCCATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCAGGGATCCTGAGTTGAAAGAGTTAAGAAAGAGAAGACATCAAGTGGTGATGGTTGCGATGAATTaGAACCAGGTCCCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: ASRDPELKELRKRRHQVVMVAMN*NQVPDL Trigger: GAGGTCAGGGACCTGGTTCCAATTCATCGCAACCAT...CACCACTTGATGTCTTCTCTTTCTTAACTCTTTCAACTCAGGATCCCTGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGAAGGGGAGGCTGGCACAGTAGCCCTGCATTTCACCTTCTCTGATGAATTAGAAAATGGTGTGCATTaGTTTGTTCTTTTAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SEGEAGTVALHFTFSDELENGVH*FVLLKL Trigger: CAGCTTTAAAAGAACAAAGCAATGCACACCATTTTC...TAATTCATCAGAGAAGGTGAAATGCAGGGCTACTGTGCCAGCCTCCCCTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCAGGGATCCTGAGTTGAAAGAGTTAAGAAAGAGAAGACATCAAGTGGTGTCATCATATCACTTCTaGGCTTCTTTTCCCACTAAA | + |
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Preference number: 2 (lower is better) Translates to: ASRDPELKELRKRRHQVVSSYHF*ASFPTK Trigger: TTTAGTGGGAAAAGAAGCTCAGAAGTGATATGATGA...CACCACTTGATGTCTTCTCTTTCTTAACTCTTTCAACTCAGGATCCCTGCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAACTAAGAACCCAGGAGTaGAGAGCAAATTCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CLFVSYISELSFHSHLWQLRTQE*RANSCA Trigger: AGCACAGGAATTTGCTCTGCACTCCTGGGTTCTTAG...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCAACTCAAGTAAGAAAATaGTGTGCATTGCTTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KLVGSMKEEVDGCDELEPTQVRK*CALLCS Trigger: AGAACAAAGCAATGCACACCATTTTCTTACTTGAGT...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAACTACTCAAAATGATATaGGCAGCAGAGGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CLFVSYISELSFHSHLWQLLKMI*AAEEGR Trigger: TCTGCCTTCCTCTGCTGCCCATATCATTTTGAGTAG...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGAGCTTCTTTTCCCACTAAATTATCTTTATGGAGTGAAAACCGTATCCCTAAGTGATGATAAATaGTCCCTGGCCATGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSELLFPLNYLYGVKTVSLSDDK*SLAMEG Trigger: TCCTTCCATGGCCAGGGACCATTTATCATCACTTAG...GGATACGGTTTTCACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR GCA 72 bp | CAGCTTGACTTCTCTTTGGTGACCAAGAGATTGTCCTaGATCCCTTACATCACTAAGAACCCAGGAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QLDFSLVTKRLS*IPYITKNPGVQ Trigger: CTGCACTCCTGGGTTCTTAGTGATGTAAGGGATGCAGGACAATCTCTTGGTCACCAAAGAGAAGTCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR TCA 72 bp | CTGGCCATGGAAGGAAACAGCTTGACTTCTCTTTGGTaGCCAAGAGATTGTCCTGCATCCCTTACATCACTA | + |
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Preference number: 3 (lower is better) Translates to: LAMEGNSLTSLW*PRDCPASLTSL Trigger: TAGTGATGTAAGGGATGCAGGACAATCTCTTGGTCACCAAAGAGAAGTCAAGCTGTTTCCTTCCATGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR TCA 72 bp | ATGATAAATGGTCCCTGGCCATGGAAGGAAACAGCTTaGCTTCTCTTTGGTGACCAAGAGATTGTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: MINGPWPWKETA*LLFGDQEIVLH Trigger: ATGCAGGACAATCTCTTGGTCACCAAAGAGAAGTCAAGCTGTTTCCTTCCATGGCCAGGGACCATTTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR CCA 72 bp | GCCCTGCATTTCACCTTCTCTGATGAATTAGTTGACTaGGTCATGGCTGAGTTGATCCATCTGTTGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: ALHFTFSDELVD*VMAELIHLLNE Trigger: CTCATTCAACAGATGGATCAACTCAGCCATGACCCAGTCAACTAATTCATCAGAGAAGGTGAAATGCAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR CCA 72 bp | CTCAAGACCACAACACAATGTCTAAGTGATGATAAATaGTCCCTGGCCATGGAAGGAAACAGCTTGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: LKTTTQCLSDDK*SLAMEGNSLTS Trigger: AGAAGTCAAGCTGTTTCCTTCCATGGCCAGGGACCATTTATCATCACTTAGACATTGTGTTGTGGTCTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR CCA 72 bp | TGGATTCTAAATCCAAGTATACTACTCAAAATGATATaGGCAGCAGAGGAAGGCAGAGTAGCTGATTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: WILNPSILLKMI*AAEEGRVADFP Trigger: AGGAAAATCAGCTACTCTGCCTTCCTCTGCTGCCCATATCATTTTGAGTAGTATACTTGGATTTAGAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR TCA 72 bp | TGGTGCCCTTCTTTAACAGCATCATCATATCACTTCTaGGCTTCTTTTCCCACTAAATTATCTTTATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: WCPSLTASSYHF*ASFPTKLSLWS Trigger: ACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGTGATATGATGATGCTGTTAAAGAAGGGCACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | GCAAGCAGGGATCCTGAGTTGAAAGAGTTAAGAAAGAGAAGACATCAAGTGGTGGCCCCGAGGGGCCACTaGCCTCTGTCATTTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: ASRDPELKELRKRRHQVVAPRGH*PLSFLY Trigger: GTAGAGAAATGACAGAGGCCAGTGGCCCCTCGGGGC...CACCACTTGATGTCTTCTCTTTCTTAACTCTTTCAACTCAGGATCCCTGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | AGTGAAGGGGAGGCTGGCACAGTAGCCCTGCATTTCACCTTCTCTGATGAATTAACGCACCCGAAATCGTaGGAAGTGCAAAGTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SEGEAGTVALHFTFSDELTHPKS*EVQSVF Trigger: GAAAACACTTTGCACTTCTCACGATTTCGGGTGCGT...TAATTCATCAGAGAAGGTGAAATGCAGGGCTACTGTGCCAGCCTCCCCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | AGTGAAGGGGAGGCTGGCACAGTAGCCCTGCATTTCACCTTCTCTGATGAATTACAAACACAGGTCTGTTaGAGCATTCCAAGCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SEGEAGTVALHFTFSDELQTQVC*SIPSSN Trigger: ATTGCTGCTTGGAATGCTCCAACAGACCTGTGTTTG...TAATTCATCAGAGAAGGTGAAATGCAGGGCTACTGTGCCAGCCTCCCCTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCAAACCCCAAAGGCCCTTaGGTCTGCTCTTACTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLVGSMKEEVDGCDELEPNPKGP*VCSYFP Trigger: TGGGAAGTAAGAGCAGACCCAAGGGCCTTTGGGGTT...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | AGTGAAGGGGAGGCTGGCACAGTAGCCCTGCATTTCACCTTCTCTGATGAATTACTCTATGTGGTAACTTaGAGGGTTCAAATGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SEGEAGTVALHFTFSDELLYVVT*RVQMEV Trigger: TACCTCCATTTGAACCCTGCAAGTTACCACATAGAG...TAATTCATCAGAGAAGGTGAAATGCAGGGCTACTGTGCCAGCCTCCCCTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | ACTTCTGAGCTTCTTTTCCCACTAAATTATCTTTATGGAGTGAAAACCGTATCCGTTCCGGGCCCACTGTaGGCGCCAATATTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSELLFPLNYLYGVKTVSVPGPL*APIFPV Trigger: GACTGGGAATATTGGCGCCCACAGTGGGCCCGGAAC...GGATACGGTTTTCACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | CTAAGAGAGAAGAGTGTCTATCTGTTCCCTAACACCCTTTTTAAAAGGATGCGAGGTGGAAATCCTCAGTaGTTCACGCACCCGAAATCG | + |
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Preference number: 4 (lower is better) Translates to: LREKSVYLFPNTLFKRMRGGNPQ*FTHPKS Trigger: CGATTTCGGGTGCGTGAATCACTGAGGATTTCCACC...TCGCATCCTTTTAAAAAGGGTGTTAGGGAACAGATAGACACTCTTCTCTCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAACTCCCCAAACAACAATaGCTGCCGCTCCCAACGCAG | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQLPKQQ*LPLPTQ Trigger: CTGCGTTGGGAGCGGCAGGCATTGTTGTTTGGGGAG...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCACTGCTCTGGTCACATTaGTTATGTAGCTGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: KLVGSMKEEVDGCDELEPLLWSH*LCSCQN Trigger: ATTTTGGCAGCTACATAATCAATGTGACCAGAGCAG...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCATGTAAGCTTGTGTTTTaGGGAAGACCACCATTGATG | + |
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Preference number: 4 (lower is better) Translates to: KLVGSMKEEVDGCDELEPCKLVF*GRPPLM Trigger: CATCAATGGTGGTCTTCCCCAAAACACAAGCTTACA...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | ACTTCTGAGCTTCTTTTCCCACTAAATTATCTTTATGGAGTGAAAACCGTATCCCAGAGCATAATCCTGTaGTGTCATGGTGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: TSELLFPLNYLYGVKTVSQSIIL*CHGGNP Trigger: AGGATTTCCACCATGACATCACAGGATTATGCTCTG...GGATACGGTTTTCACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAACTGCACACCTCAGCTaGTCTGGTCACATTGATTAT | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQTAHLS*SGHIDY Trigger: ATAATCAATGTGACCAGAGCAGCTGAGGTGTGCAGT...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAACCTCCCATTATTCTTaGAAAGGTGACGACTGCACA | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQTSHYS*KGDDCT Trigger: TGTGCAGTCGTCACCTTTGCAAGAATAATGGGAGGT...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CCA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCATCTCAAAAGTTGCCTTaGCTGAATATTCAATATCAG | + |
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Preference number: 4 (lower is better) Translates to: KLVGSMKEEVDGCDELEPSQKLP*LNIQYQ Trigger: CTGATATTGAATATTCAGCCAAGGCAACTTTTGAGA...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAGGGCTTCCAACCATCTaGAACACTTTTAAGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQGLPTI*NTFKFS Trigger: ACTGAACTTAAAAGTGTTTCAGATGGTTGGAAGCCC...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR TCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAAAAAGTTGCCTTGGCTaGATATTCAATATCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQKSCLG*IFNISS Trigger: GCTGCTGATATTGAATATTCAGCCAAGGCAACTTTT...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAACGAAATCGTGAGAAGTaGAAAGTGTTTTCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CLFVSYISELSFHSHLWQRNREK*KVFSLS Trigger: AGACAGTGAAAACACTTTGCACTTCTCACGATTTCG...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR GCA 90 bp | ACTTCTGAGCTTCTTTTCCCACTAAATTATCTTTATGGAGTGAAAACCGTATCCAGTGTTTTCACTGTCTaGAAAGGATTTCCTAATACT | + |
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Preference number: 4 (lower is better) Translates to: TSELLFPLNYLYGVKTVSSVFTV*KGFPNT Trigger: AGTATTAGGAAATCCTTTGCAGACAGTGAAAACACT...GGATACGGTTTTCACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| 3UTR CAA 72 bp | ATAGTACACCAAAAGTTACCAGCATATGGTAGGGGTTaGTTGGTGATTTCTTTGGTTATTATTAAAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: IVHQKLPAYGRG*LVISLVIIKVV Trigger: CACAACTTTAATAATAACCAAAGAAATCACCAACAAACCCCTACCATATGCTGGTAACTTTTGGTGTACTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS TCA 90 bp | CTGCCATCACAGCTAGGTCAGTGTCTGATGCTCTTCCCCTCACTATaGATTCTCCATCCTCAGAGGCCTCTATGTGGTAACTTGCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LPSQLGQCLMLFPSL*ILHPQRPLCGNLQG Trigger: ACCCTGCAAGTTACCACATAGAGGCCTCTGAGGATGGAGAATTCATAGTGAGGGGAAGAGCATCAGACACTGACCTAGCTGTGATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 90 bp | CCTCACTATGAATTCTCCATCCTCAGAGGCCTCTATGTGGTAACTTaGAGGGTTCAAATGGAGGTAATGAGCTGCTTTCCATGTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: PHYEFSILRGLYVVT*RVQMEVMSCFPCLP Trigger: CGGAAGACATGGAAAGCAGCTCATTACCTCCATTTGAACCCTGCAAGTTACCACATAGAGGCCTCTGAGGATGGAGAATTCATAGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 90 bp | CTTCTGTCTGTAGATATCCTTTGTGTTCCAGTTCCGGGCCCACTGTaGGCGCCAATATTCCCAGTCTATAACAGCAAGTCCACTGAAATT | + |
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Preference number: 5 (lower is better) Translates to: LLSVDILCVPVPGPL*APIFPVYNSKSTEI Trigger: AATTTCAGTGGACTTGCTGTTATAGACTGGGAATATTGGCGCCCACAGTGGGCCCGGAACTGGAACACAAAGGATATCTACAGACAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 90 bp | GGCCTCTATGTGGTAACTTGCAGGGTTCAAATGGAGGTAATGAGCTaGTTTCCATGTCTTCCGTACACACCTCCCATTATTCTTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GLYVVTCRVQMEVMS*FPCLPYTPPIILAK Trigger: CTTTGCAAGAATAATGGGAGGTGTGTACGGAAGACATGGAAAGCAGCTCATTACCTCCATTTGAACCCTGCAAGTTACCACATAGAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 90 bp | GTGTGTAGACAAATACAGGCAGAGCATAATCCTGTGATGTCATGGTaGAAATCCTCAGTGATTCACGCACCCGAAATCGTGAGAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: VCRQIQAEHNPVMSW*KSSVIHAPEIVRSA Trigger: TGCACTTCTCACGATTTCGGGTGCGTGAATCACTGAGGATTTCCACCATGACATCACAGGATTATGCTCTGCCTGTATTTGTCTACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 90 bp | ACACCTCCCATTATTCTTGCAAAGGTGACGACTGCACACCTCAGCTaGTCTGGTCACATTGATTATGTAGCTGCCAAAATCAGAATTCAC | + |
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Preference number: 5 (lower is better) Translates to: TPPIILAKVTTAHLS*SGHIDYVAAKIRIH Trigger: GTGAATTCTGATTTTGGCAGCTACATAATCAATGTGACCAGAGCAGCTGAGGTGTGCAGTCGTCACCTTTGCAAGAATAATGGGAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCAGGTGTACTTGTAAGCTaGTGTTTTGGGGAAGACCAC | + |
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Preference number: 5 (lower is better) Translates to: KLVGSMKEEVDGCDELEPGVLVS*CFGEDH Trigger: GTGGTCTTCCCCAAAACACAAGCTTACAAGTACACC...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | AAACTGGTAGGGTCTATGAAGGAAGAGGTTGATGGTTGCGATGAATTGGAACCAAAATATAACAACATTTaGCCCCCTGTCTTTGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: KLVGSMKEEVDGCDELEPKYNNI*PPVFEP Trigger: CGGCTCAAAGACAGGGGGCAAAATGTTGTTATATTT...TGGTTCCAATTCATCGCAACCATCAACCTCTTCCTTCATAGACCCTACCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAGTCTGTAGATATCCTTaGTGTTCCAGTTCCGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CLFVSYISELSFHSHLWQVCRYP*CSSSGP Trigger: GGGCCCGGAACTGGAACACAAAGGATATCTACAGAC...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS TCA 90 bp | GAGCCAAGAGAGGTCATTGTTCCTCAAAACTTCCTCTTCTGGGCATaGCCCAGTATAGTTTGTGGCATAAACATTATAATTGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: EPREVIVPQNFLFWA*PSIVCGINIIIVAI Trigger: GATTGCCACAATTATAATGTTTATGCCACAAACTATACTGGGTCATGCCCAGAAGAGGAAGTTTTGAGGAACAATGACCTCTCTTGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS TCA 90 bp | ATCAGCAGCAGATATGTTCTCTTTCATATCAGAAATAAGAGTTCTTaGCTTCTGTCTGTAGATATCCTTTGTGTTCCAGTTCCGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ISSRYVLFHIRNKSS*LLSVDILCVPVPGP Trigger: TGGGCCCGGAACTGGAACACAAAGGATATCTACAGACAGAAGTCAAGAACTCTTATTTCTGATATGAAAGAGAACATATCTGCTGCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAATCAAACACAGGTCTGTaGGAGCATTCCAAGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: CLFVSYISELSFHSHLWQSNTGL*EHSKQQ Trigger: TTGCTGCTTGGAATGCTCCAACAGACCTGTGTTTGA...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | ACTTCTGAGCTTCTTTTCCCACTAAATTATCTTTATGGAGTGAAAACCGTATCCCCTCTATGTGGTAACTaGCAGGGTTCAAATGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: TSELLFPLNYLYGVKTVSPLCGN*QGSNGG Trigger: ACCTCCATTTGAACCCTGCAAGTTACCACATAGAGG...GGATACGGTTTTCACTCCATAAAGATAATTTAGTGGGAAAAGAAGCTCAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAAAGCCAAGAGAGGTCATaGTTCCTCAAAACTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: CLFVSYISELSFHSHLWQSQERS*FLKTSS Trigger: AGAGGAAGTTTTGAGGAACAATGACCTCTCTTGGCT...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTGTATCGTACATTTCAGAATTAAGCTTTCACAGTCACCTCTGGCAACACTTTTCTCAAAAGTaGCCTTGGCTGAATATTCAA | + |
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Preference number: 5 (lower is better) Translates to: CLFVSYISELSFHSHLWQHFSQK*PWLNIQ Trigger: TTGAATATTCAGCCAAGGCAACTTTTGAGAAAAGTG...TTGCCAGAGGTGACTGTGAAAGCTTAATTCTGAAATGTACGATACAAACAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 90 bp | TGTTCCTCAAAACTTCCTCTTCTGGGCATGACCCAGTATAGTTTGTaGCATAAACATTATAATTGTGGCAATCAGGATATAAATAATAAC | + |
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Preference number: 5 (lower is better) Translates to: CSSKLPLLGMTQYSL*HKHYNCGNQDINNN Trigger: GTTATTATTTATATCCTGATTGCCACAATTATAATGTTTATGCCACAAACTATACTGGGTCATGCCCAGAAGAGGAAGTTTTGAGGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 72 bp | GTAGATATCCTTTGTGTTCCAGTTCCGGGCCCACTGTaGGCGCCAATATTCCCAGTCTATAACAGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VDILCVPVPGPL*APIFPVYNSKS Trigger: GGACTTGCTGTTATAGACTGGGAATATTGGCGCCCACAGTGGGCCCGGAACTGGAACACAAAGGATATCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 72 bp | GAATTCTCCATCCTCAGAGGCCTCTATGTGGTAACTTaGAGGGTTCAAATGGAGGTAATGAGCTGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: EFSILRGLYVVT*RVQMEVMSCFP Trigger: TGGAAAGCAGCTCATTACCTCCATTTGAACCCTGCAAGTTACCACATAGAGGCCTCTGAGGATGGAGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 72 bp | CAAATACAGGCAGAGCATAATCCTGTGATGTCATGGTaGAAATCCTCAGTGATTCACGCACCCGAAATCGTG | + |
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Preference number: 6 (lower is better) Translates to: QIQAEHNPVMSW*KSSVIHAPEIV Trigger: CACGATTTCGGGTGCGTGAATCACTGAGGATTTCCACCATGACATCACAGGATTATGCTCTGCCTGTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 72 bp | GTGGTAACTTGCAGGGTTCAAATGGAGGTAATGAGCTaGTTTCCATGTCTTCCGTACACACCTCCCATTATT | + |
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Preference number: 6 (lower is better) Translates to: VVTCRVQMEVMS*FPCLPYTPPII Trigger: AATAATGGGAGGTGTGTACGGAAGACATGGAAAGCAGCTCATTACCTCCATTTGAACCCTGCAAGTTACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CAA 90 bp | CCATGGGTAATATCCCAATCTGTTGGCATAAAATATAACAACATTTaGCCCCCTGTCTTTGAGCCGAGGGCTTCCAACCATCTGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: PWVISQSVGIKYNNI*PPVFEPRASNHLKH Trigger: GTGTTTCAGATGGTTGGAAGCCCTCGGCTCAAAGACAGGGGGCAAAATGTTGTTATATTTTATGCCAACAGATTGGGATATTACCCATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS GCA 72 bp | ATTATTCTTGCAAAGGTGACGACTGCACACCTCAGCTaGTCTGGTCACATTGATTATGTAGCTGCCAAAATC | + |
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Preference number: 6 (lower is better) Translates to: IILAKVTTAHLS*SGHIDYVAAKI Trigger: GATTTTGGCAGCTACATAATCAATGTGACCAGAGCAGCTGAGGTGTGCAGTCGTCACCTTTGCAAGAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CAA 72 bp | ATATCCCAATCTGTTGGCATAAAATATAACAACATTTaGCCCCCTGTCTTTGAGCCGAGGGCTTCCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: ISQSVGIKYNNI*PPVFEPRASNH Trigger: ATGGTTGGAAGCCCTCGGCTCAAAGACAGGGGGCAAAATGTTGTTATATTTTATGCCAACAGATTGGGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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| CDS CCA 72 bp | AAACTTCCTCTTCTGGGCATGACCCAGTATAGTTTGTaGCATAAACATTATAATTGTGGCAATCAGGATATA | + |
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Preference number: 6 (lower is better) Translates to: KLPLLGMTQYSL*HKHYNCGNQDI Trigger: TATATCCTGATTGCCACAATTATAATGTTTATGCCACAAACTATACTGGGTCATGCCCAGAAGAGGAAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031691.3 |
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