Pregenerated sensors for HYAL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010047Ensembl transcript IDs: ENSMUST00000010191.13, ENSMUST00000192887.6, ENSMUST00000193747.2, ENSMUST00000194794.2, ENSMUST00000195681.2, ENSMUST00000195752.6
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGGGGTATGGCCAGGCACTAGGCGGAAGCTGCTGGCATTGAGGTaGAGGAAGGTATTGGCGCTGGGGTTGCGGCGCACACATCGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LGVWPGTRRKLLALR*RKVLALGLRRTHRP Trigger: TGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCGCCTAGTGCCTGGCCATACCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR GCA 90 bp | GCTGGTGAGGTGGGATCCAGCCCAGGCTCTGCTGGCATTTCCAGCTaGCCCCTTATAGTTCCGTTGGCACTGCTCGCCACCCCAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: AGEVGSSPGSAGISS*PLIVPLALLATPAQ Trigger: CTGGGCTGGGGTGGCGAGCAGTGCCAACGGAACTATAAGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTGGATCCCACCTCACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | TGCAGGAAGGTATTGGCGCTGGGGTTGCGGCGCACACATCGCCCATaGCCATGGCACTGGGTCCAACTGCAATACTGGGTGGCCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: CRKVLALGLRRTHRP*PWHWVQLQYWVAQD Trigger: GTCCTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR TCA 90 bp | GTTCACTGGGGGTATGGCCAGGCACTAGGCGGAAGCTGCTGGCATTaGGGTGCAGGAAGGTATTGGCGCTGGGGTTGCGGCGCACACATC | + |
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Preference number: 1 (lower is better) Translates to: VHWGYGQALGGSCWH*GAGRYWRWGCGAHI Trigger: GATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCGCCTAGTGCCTGGCCATACCCCCAGTGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | GTCCAGGTGAGAGCCACAGCTACCAAACCCAGCAGGCTGGTGAGGTaGGATCCAGCCCAGGCTCTGCTGGCATTTCCAGCTGCCCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: VQVRATATKPSRLVR*DPAQALLAFPAAPL Trigger: TAAGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTGGATCCCACCTCACCAGCCTGCTGGGTTTGGTAGCTGTGGCTCTCACCTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR TCA 90 bp | GGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTaGTATCCAGGGGGAGAGATCCCTCATAAGGTCCAGGTGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: GPSCQGDPCTRGQLD*YPGGEIPHKVQVRA Trigger: GGCTCTCACCTGGACCTTATGAGGGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR TCA 90 bp | CCGATGGTAGAGATAAGGTCCACCTGTGTGGGGAGGGATGGTTCCTaGGCAAGACTGGCACCAGACGGTGTCGCAGGAGACTCAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: PMVEIRSTCVGRDGS*ARLAPDGVAGDSEQ Trigger: CTGTTCTGAGTCTCCTGCGACACCGTCTGGTGCCAGTCTTGCTCAGGAACCATCCCTCCCCACACAGGTGGACCTTATCTCTACCATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | AGGAAGGGCGGAACTCCAGCTGTTCAAGATAGCATTTCCTCTTCCTaGGAACAGGGTGGGGGTGCCCTTCTTCCCTCTTGGGTCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RKGGTPAVQDSISSS*EQGGGALLPSWVQG Trigger: TCCCTGGACCCAAGAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCTATCTTGAACAGCTGGAGTTCCGCCCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | ATAGTCAGTCCCCTGTCCCTAGTGAGAAGCGGGGTTGAGACAGACTaGAGCCCAGCTGTGTGGATGAGGAAGGGCGGAACTCCAGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: IVSPLSLVRSGVETD*SPAVWMRKGGTPAV Trigger: AACAGCTGGAGTTCCGCCCTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAGGGACAGGGGACTGACTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR GCA 90 bp | TGGGGGTGCCCTTCTTCCCTCTTGGGTCCAGGGACAAAGCTGCTATaGTTAGGAGATAAGCTATACTCAGTGTGTACACCCAGGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: WGCPSSLLGPGTKLL*LGDKLYSVCTPRWG Trigger: CCCCCACCTGGGTGTACACACTGAGTATAGCTTATCTCCTAAGCATAGCAGCTTTGTCCCTGGACCCAAGAGGGAAGAAGGGCACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | TCCCTAGTGAGAAGCGGGGTTGAGACAGACTGGAGCCCAGCTGTGTaGATGAGGAAGGGCGGAACTCCAGCTGTTCAAGATAGCATTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLVRSGVETDWSPAV*MRKGGTPAVQDSIS Trigger: GGAAATGCTATCTTGAACAGCTGGAGTTCCGCCCTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR GCA 90 bp | CAAAGTCAGGATGCCTGGTTTAGTTCTGTGCACTTTTCATGGACTTaGTACAGGCTCCTGGCTACCTCTCAGCATCTCTGGGCCTCGGTC | + |
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Preference number: 1 (lower is better) Translates to: QSQDAWFSSVHFSWT*YRLLATSQHLWASV Trigger: GACCGAGGCCCAGAGATGCTGAGAGGTAGCCAGGAGCCTGTAGCAAGTCCATGAAAAGTGCACAGAACTAAACCAGGCATCCTGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR TCA 90 bp | CTTGAGGTATTGGCAGGTCTCCTGGAAAAGGCCAAGGTTAAGGAGTaGGTGTCTGATGTTAGCTACCTTTGCCCAAGCCCCGACGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: LEVLAGLLEKAKVKE*VSDVSYLCPSPDGN Trigger: GTTTCCGTCGGGGCTTGGGCAAAGGTAGCTAACATCAGACACTCACTCCTTAACCTTGGCCTTTTCCAGGAGACCTGCCAATACCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR GCA 90 bp | GTTACACATTCTGACCCCAAAGTCAGGATGCCTGGTTTAGTTCTGTaGACTTTTCATGGACTTGCTACAGGCTCCTGGCTACCTCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VTHSDPKVRMPGLVL*TFHGLATGSWLPLS Trigger: GCTGAGAGGTAGCCAGGAGCCTGTAGCAAGTCCATGAAAAGTGCACAGAACTAAACCAGGCATCCTGACTTTGGGGTCAGAATGTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 90 bp | CTGCTATGCTTAGGAGATAAGCTATACTCAGTGTGTACACCCAGGTaGGGGGCAGAAGCCAAAGTATACACTCTTCATCAGCCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LLCLGDKLYSVCTPR*GAEAKVYTLHQPWK Trigger: CTTCCAGGGCTGATGAAGAGTGTATACTTTGGCTTCTGCCCCCCACCTGGGTGTACACACTGAGTATAGCTTATCTCCTAAGCATAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CAA 90 bp | CCAGGCACTAGGCGGAAGCTGCTGGCATTGAGGTGCAGGAAGGTATaGGCGCTGGGGTTGCGGCGCACACATCGCCCATGGCCATGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PGTRRKLLALRCRKV*ALGLRRTHRPWPWH Trigger: GTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCGCCTAGTGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTGGCGCTGGGGTTGCGGCGCACACATCGCCCATGGCCATGGCACTGGGTCAGTGAGAAGCGGGGTTaGGACAGACTGGAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VLALGLRRTHRPWPWHWVSEKRG*DRLEPS Trigger: GCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACT...GACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTGGCGCTGGGGTTGCGGCGCACACATCGCCCATGGCCATGGCACTGGGTCTTCCTGGGAACAGGGTaGGGGTGCCCTTCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VLALGLRRTHRPWPWHWVFLGTG*GCPSSL Trigger: GAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAA...GACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CAA 90 bp | CGGAAGCTGCTGGCATTGAGGTGCAGGAAGGTATTGGCGCTGGGGTaGCGGCGCACACATCGCCCATGGCCATGGCACTGGGTCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: RKLLALRCRKVLALG*RRTHRPWPWHWVQL Trigger: CAGTTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAGTTGAGGTCGGCTTCGCTGAGCTGCCCCTCGGGTCGAAGCTGGGGTTCGGCACTGGGTCCAACTaGAATACTGGGTGGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QVVEVGFAELPLGSKLGFGTGSN*NTGWPR Trigger: CCTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCC...GAACCCCAGCTTCGACCCGAGGGGCAGCTCAGCGAAGCCGACCTCAACTACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CAA 90 bp | AGCCCAGGCTCTGCTGGCATTTCCAGCTGCCCCCTTATAGTTCCGTaGGCACTGCTCGCCACCCCAGCCCAGATAGCACTGGCAGCGAAA | + |
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Preference number: 2 (lower is better) Translates to: SPGSAGISSCPLIVP*ALLATPAQIALAAK Trigger: TTTCGCTGCCAGTGCTATCTGGGCTGGGGTGGCGAGCAGTGCCAACGGAACTATAAGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCAGGGCGGCACTCTCACCGATGGTAGAGATAAGGTCCACCTGTGTGGGGAGCATTTCCTCTTCCTaGGAACAGGGTGGGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: EPRAALSPMVEIRSTCVGSISSS*EQGGGA Trigger: GGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCT...CCCCACACAGGTGGACCTTATCTCTACCATCGGTGAGAGTGCCGCCCTGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACCAGCCCAGGCTCTGCTaGCATTTCCAGCTGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYQPRLC*HFQLPP Trigger: AGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTG...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACGTTCCTGAGCAAGACTaGCACCAGACGGTGTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYVPEQD*HQTVSQ Trigger: CTGCGACACCGTCTGGTGCCAGTCTTGCTCAGGAAC...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACGAAGCTGGGGTTCACTaGGGGTATGGCCAGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYEAGVH*GYGQAL Trigger: TAGTGCCTGGCCATACCCCCAGTGAACCCCAGCTTC...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACGCACCAGAGGCCAGCTaGACTGATATCCAGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TDGMGALLSILGALPTPDAPEAS*TDIQGE Trigger: CTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGC...GTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR GCA 90 bp | GGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGCTAACAGGCCCCTCATaGCAAGGAGATCCTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: GLARFSIFSGKMRASQGMLTGPS*QGDPCT Trigger: GGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAG...CATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCCCATGGCCATGGCACTaGGTCCAACTGCAATACTGG | + |
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Preference number: 2 (lower is better) Translates to: SGLLWPSSILHLLWQDEGPWPWH*VQLQYW Trigger: CCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGG...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACATGCCAAGGAGATCCTTaGACCAGAGGCCAGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLWQDEGISGDVSLPLRTCQGDP*TRGQLD Trigger: GTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCA...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTGCACCAGAGGCCAGCTaGACTGATATCCAGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LARFSIFSGKMRASQGMFAPEAS*TDIQGE Trigger: CTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGC...AAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCATTCTCCATCTTCTCTaGCAAGATGAGGGCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: RPLMPRRSLHQRPAGLISILHLL*QDEGIS Trigger: TGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAAT...GGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR TCA 90 bp | TATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACTTTTGTCTTCTTCTCTGGCAAGATaGGGGCATCTCAGGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: YGCSAKHPGSTAYSRLLSSSLAR*GHLRGC Trigger: ACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGA...AGACAAAAGTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACTAACAGGCCCCTCATaGCAAGGAGATCCTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: IFSGKMRASQGMFLSPLELTGPS*QGDPCT Trigger: GGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAG...TTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR GCA 90 bp | TCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCTAACAGGCCCCTCATaGCAAGGAGATCCTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: SILHLLWQDEGISGDVSLLTGPS*QGDPCT Trigger: GGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAG...GAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| 3UTR-3UTR GCA 90 bp | TATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACTTTTGTCTCACTTTTCATGGACTTaGTACAGGCTCCTGGCTACC | + |
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Preference number: 2 (lower is better) Translates to: YGCSAKHPGSTAYSRLLSHFSWT*YRLLAT Trigger: GGTAGCCAGGAGCCTGTAGCAAGTCCATGAAAAGTG...AGACAAAAGTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAAGCACTCTACTGAGGCACATCCCTGGCATATTTATTTGTATATGTATTTCCTGGGAACAGGGTaGGGGTGCCCTTCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LGKHSTEAHPWHIYLYMYFLGTG*GCPSSL Trigger: GAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAA...ATACATATACAAATAAATATGCCAGGGATGTGCCTCAGTAGAGTGCTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGTGGATGAGGAAGGGCGGAACTCCAGCTGTTCAAGATAGCATTTCCTCTCAAAGTCAGGATGCCTaGTTTAGTTCTGTGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: AVWMRKGGTPAVQDSISSQSQDA*FSSVHF Trigger: AAAGTGCACAGAACTAAACCAGGCATCCTGACTTTG...AGAGGAAATGCTATCTTGAACAGCTGGAGTTCCGCCCTTCCTCATCCACACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGAACCCTAGACTAGGCAAGCACTCTACTGAGGCACATCCCTGGCATATTATTCTCCATCTTCTCTaGCAAGATGAGGGCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLNPRLGKHSTEAHPWHIILHLL*QDEGIS Trigger: TGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAAT...AATATGCCAGGGATGTGCCTCAGTAGAGTGCTTGCCTAGTCTAGGGTTCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAAGCACTCTACTGAGGCACATCCCTGGCATATTTATTTGTATATGTATGTGTGTACACCCAGGTaGGGGGCAGAAGCCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LGKHSTEAHPWHIYLYMYVCTPR*GAEAKV Trigger: TACTTTGGCTTCTGCCCCCCACCTGGGTGTACACAC...ATACATATACAAATAAATATGCCAGGGATGTGCCTCAGTAGAGTGCTTGCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | AGGTCGGCTTCGCTGAGCTGCCCCTCGGGTCGAAGCTaGGGTTCACTGGGGGTATGGCCAGGCACTAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: RSASLSCPSGRS*GSLGVWPGTRR Trigger: CCGCCTAGTGCCTGGCCATACCCCCAGTGAACCCCAGCTTCGACCCGAGGGGCAGCTCAGCGAAGCCGACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | GCGCTGGGGTTGCGGCGCACACATCGCCCATGGCCATaGCACTGGGTCCAACTGCAATACTGGGTGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: ALGLRRTHRPWP*HWVQLQYWVAQ Trigger: CTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | GTATTGGCGCTGGGGTTGCGGCGCACACATCGCCCATaGCCATGGCACTGGGTCCAACTGCAATACTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: VLALGLRRTHRP*PWHWVQLQYWV Trigger: CACCCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | CCCCTGTCCCTAGTGAGAAGCGGGGTTGAGACAGACTaGAGCCCAGCTGTGTGGATGAGGAAGGGCGGAACT | + |
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Preference number: 3 (lower is better) Translates to: PLSLVRSGVETD*SPAVWMRKGGT Trigger: AGTTCCGCCCTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAGGGACAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
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| 3UTR TCA 72 bp | GAGATAAGGTCCACCTGTGTGGGGAGGGATGGTTCCTaGGCAAGACTGGCACCAGACGGTGTCGCAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: EIRSTCVGRDGS*ARLAPDGVAGD Trigger: GTCTCCTGCGACACCGTCTGGTGCCAGTCTTGCTCAGGAACCATCCCTCCCCACACAGGTGGACCTTATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | CCACCTGTGTGGGGAGGGATGGTTCCTGAGCAAGACTaGCACCAGACGGTGTCGCAGGAGACTCAGAACAGA | + |
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Preference number: 3 (lower is better) Translates to: PPVWGGMVPEQD*HQTVSQETQNR Trigger: TCTGTTCTGAGTCTCCTGCGACACCGTCTGGTGCCAGTCTTGCTCAGGAACCATCCCTCCCCACACAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| 3UTR CCA 72 bp | AGGCAGAGGCCGCTCTGCCCATTTCTATCCTCACCTTaGACCTTAGTCTCCAAGGCCAAGAGCCCACGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RQRPLCPFLSSP*TLVSKAKSPRM Trigger: CATGCGTGGGCTCTTGGCCTTGGAGACTAAGGTCCAAGGTGAGGATAGAAATGGGCAGAGCGGCCTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR TCA 72 bp | TGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTaGTATCCAGGGGGAGAGATCCCTCATAAGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CQGDPCTRGQLD*YPGGEIPHKVQ Trigger: CTGGACCTTATGAGGGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CCA 72 bp | CCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTaGACTGATATCCAGGGGGAGAGATCCCTCATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PHAKEILAPEAS*TDIQGERSLIR Trigger: CCTTATGAGGGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR TCA 72 bp | TATAGTCAGTCCCCTGTCCCTAGTGAGAAGCGGGGTTaGGACAGACTGGAGCCCAGCTGTGTGGATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YSQSPVPSEKRG*DRLEPSCVDEE Trigger: TTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAGGGACAGGGGACTGACTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACAATGCCAAGGAGATCCTaGCACCAGAGGCCAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLWQDEGISGDVSLPLRTMPRRS*HQRPAG Trigger: TCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCAT...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| 3UTR GCA 72 bp | GACCTTAGGACAGTTCTAGACAGGCAGAGGCCGCTCTaGCCATTTCTATCCTCACCTTGGACCTTAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLRTVLDRQRPL*PFLSSPWTLVS Trigger: GGAGACTAAGGTCCAAGGTGAGGATAGAAATGGGCAGAGCGGCCTCTGCCTGTCTAGAACTGTCCTAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CCA 72 bp | GGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTaGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLLWPSSILHLL*QDEGISGDVSL Trigger: GAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| 3UTR CCA 72 bp | GGGGCAGAAGCCAAAGTATACACTCTTCATCAGCCCTaGAAGGCCGGGTGGGTCTCCCTTACCATACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GAEAKVYTLHQP*KAGWVSLTILE Trigger: TTCAAGTATGGTAAGGGAGACCCACCCGGCCTTCCAGGGCTGATGAAGAGTGTATACTTTGGCTTCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR TCA 72 bp | TTGGCAGGTCTCCTGGAAAAGGCCAAGGTTAAGGAGTaGGTGTCTGATGTTAGCTACCTTTGCCCAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LAGLLEKAKVKE*VSDVSYLCPSP Trigger: GGGGCTTGGGCAAAGGTAGCTAACATCAGACACTCACTCCTTAACCTTGGCCTTTTCCAGGAGACCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR TCA 72 bp | GGGTCCAACTGCAATACTGGGTGGCCCAGGACACGTTaGCTATGTAGGGAACCAGCAGCTGAGTTAGGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSNCNTGWPRTR*LCREPAAELGN Trigger: ATTACCTAACTCAGCTGCTGGTTCCCTACATAGTCAACGTGTCCTGGGCCACCCAGTATTGCAGTTGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CCA 72 bp | ACTATCCAGGAGCAGGGAGTAGAGTCAGGCCTTCTCTaGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TIQEQGVESGLL*PSSILHLLWQD Trigger: ATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCCCTGCTCCTGGATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| 3UTR CCA 72 bp | GTTCTGTGCACTTTTCATGGACTTGCTACAGGCTCCTaGCTACCTCTCAGCATCTCTGGGCCTCGGTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VLCTFHGLATGS*LPLSISGPRSY Trigger: ATAAGACCGAGGCCCAGAGATGCTGAGAGGTAGCCAGGAGCCTGTAGCAAGTCCATGAAAAGTGCACAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR GCA 72 bp | CCTTCTTCCCTCTTGGGTCCAGGGACAAAGCTGCTATaGTTAGGAGATAAGCTATACTCAGTGTGTACACCC | + |
|
Preference number: 3 (lower is better) Translates to: PSSLLGPGTKLL*LGDKLYSVCTP Trigger: GGGTGTACACACTGAGTATAGCTTATCTCCTAAGCATAGCAGCTTTGTCCCTGGACCCAAGAGGGAAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| 3UTR GCA 72 bp | TCTGACCCCAAAGTCAGGATGCCTGGTTTAGTTCTGTaGACTTTTCATGGACTTGCTACAGGCTCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SDPKVRMPGLVL*TFHGLATGSWL Trigger: TAGCCAGGAGCCTGTAGCAAGTCCATGAAAAGTGCACAGAACTAAACCAGGCATCCTGACTTTGGGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR TCA 72 bp | CTATGTAGGGAACCAGCAGCTGAGTTAGGTAATTCTTaGGGTATTGGCAGGTCTCCTGGAAAAGGCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LCREPAAELGNS*GIGRSPGKGQG Trigger: ACCTTGGCCTTTTCCAGGAGACCTGCCAATACCTCAAGAATTACCTAACTCAGCTGCTGGTTCCCTACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CCA 72 bp | TTAGGAGATAAGCTATACTCAGTGTGTACACCCAGGTaGGGGGCAGAAGCCAAAGTATACACTCTTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGDKLYSVCTPR*GAEAKVYTLHQ Trigger: CTGATGAAGAGTGTATACTTTGGCTTCTGCCCCCCACCTGGGTGTACACACTGAGTATAGCTTATCTCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CAA 72 bp | CTGGCATTGAGGTGCAGGAAGGTATTGGCGCTGGGGTaGCGGCGCACACATCGCCCATGGCCATGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALRCRKVLALG*RRTHRPWPWHW Trigger: CCAGTGCCATGGCCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| 3UTR CAA 72 bp | AGGCGGAAGCTGCTGGCATTGAGGTGCAGGAAGGTATaGGCGCTGGGGTTGCGGCGCACACATCGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKLLALRCRKV*ALGLRRTHRPW Trigger: CCATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGATGGCCAGTCAGGGTaGCGACTGGCCACCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APHAKEILAPEASWTDIQDGQSG*RLATSW Trigger: CCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATC...CTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCCTTCTTCCCTCTTGGGTCCAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFPLPGNRVGVPFFPLGSSQGAD*PPAGVK Trigger: CTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACT...GGACCCAAGAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | CCTAACAGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGAGCAGGCTGGTGAGGTaGGATCCAGCCCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNRPLMPRRSLHQRPAGLSRLVR*DPAQAL Trigger: CAGAGCCTGGGCTGGATCCCACCTCACCAGCCTGCT...CAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCGATGGCCAGTCAGGGTaGCGACTGGCCACCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSDGQSG*RLATSW Trigger: CCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATC...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLMPRRSLHQRPAGLISSQGAD*PPAGVK Trigger: CTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACT...GGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCCAGAGCCAGGCCAGCTaGTCGTTCCGTGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSQSQAS*SFRATS Trigger: GGAGGTGGCACGGAACGACCAGCTGGCCTGGCTCTG...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNRPLMPRRSLHQRPAGLCGHVP*YHKGSA Trigger: GGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACA...CAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAGGGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTGATGGCCAGTCAGGGTaGCGACTGGCCACCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEQGVESGLLWPSSILHLDGQSG*RLATSW Trigger: CCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATC...AAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCCCTGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | GCGCACACATCGCCCATGGCCATGGCACTGGGTCCAACTGCAATACTGGGTGGCGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHTSPMAMALGPTAILGGVLGSD*LDVTES Trigger: ACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCAC...GCCACCCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGCACTGGGTCCAACTaGAATACTGGGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APHAKEILAPEASWTDIQGTGSN*NTGWPR Trigger: CCTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCC...CTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCCTTCTTCCCTCTTGGGTCAAGCCCCACAGGTGCTaGGGTCTGACTGCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SISSSWEQGGGALLPSWVKPHRC*GLTALT Trigger: CGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTT...GACCCAAGAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGCTGTTCAAGATAGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCCAGAGCCAGGCCAGCTaGTCGTTCCGTGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPAVQDSISSSWEQGGGAQSQAS*SFRATS Trigger: GGAGGTGGCACGGAACGACCAGCTGGCCTGGCTCTG...GGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCTATCTTGAACAGCTGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACGGTTCACTGGGGGTATaGCCAGGCACTAGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYGSLGV*PGTRRK Trigger: CTTCCGCCTAGTGCCTGGCCATACCCCCAGTGAACC...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| 3UTR CAA 72 bp | TCTGCTGGCATTTCCAGCTGCCCCCTTATAGTTCCGTaGGCACTGCTCGCCACCCCAGCCCAGATAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGISSCPLIVP*ALLATPAQIAL Trigger: CAGTGCTATCTGGGCTGGGGTGGCGAGCAGTGCCAACGGAACTATAAGGGGGCAGCTGGAAATGCCAGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR TCA 90 bp | CCTAACAGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGGGAAGCTGCTGGCATTaGGGTGCAGGAAGGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNRPLMPRRSLHQRPAGLGSCWH*GAGRYW Trigger: CCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCC...CAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | GGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCTATTGGCGCTGGGGTTaGGGCGCACACATCGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDRWYGCSAKHPGSTAYSYWRWG*GAHIAH Trigger: ATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATA...GGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDGMGALLSILGALPTPDSQGAD*PPAGVK Trigger: CTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACT...GTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCAAGCCCCACAGGTGCTaGGGTCTGACTGCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSKPHRC*GLTALT Trigger: CGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTT...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACGGTGCAGGAAGGTATTaGCGCTGGGGTTGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDGMGALLSILGALPTPDGAGRY*RWGCGA Trigger: TGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACC...GTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCCAGCCCAGGCTCTGCTaGCATTTCCAGCTGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGQPRLC*HFQLPP Trigger: AGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTG...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGAAGCAGGCTGGTGAGGTaGGATCCAGCCCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRWYGCSAKHPGSTAYSRSRLVR*DPAQAL Trigger: CAGAGCCTGGGCTGGATCCCACCTCACCAGCCTGCT...TCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | CCTAACAGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PNRPLMPRRSLHQRPAGLPEHGN*QSCGCV Trigger: TACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGG...CAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | GATAGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCCTTCTTCCCTCTTGGTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSISSSWEQGGGALLPSWCGHVP*YHKGSA Trigger: GGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACA...CCAAGAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGCTACCTCTCAGCATCTCTGGGCCTCGGTCTTATCTACAGAATGGGGGTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLATSQHLWASVLSTEWGCGHVP*YHKGSA Trigger: GGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACA...CCCCCATTCTGTAGATAAGACCGAGGCCCAGAGATGCTGAGAGGTAGCCAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | GACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACAGCATGGGCAGGTGTaGACAGAGGCTGCCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRWYGCSAKHPGSTAYSRQHGQV*TEAAVL Trigger: CAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTG...TCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGCTGTTCAAGATAGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCAGGGAAAGAGAGCCGTaGTCTCAGCCCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAVQDSISSSWEQGGGAREREP*SQPRAR Trigger: CCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCT...GGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCTATCTTGAACAGCTGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCGGCACTGGGTCCAACTaGAATACTGGGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGGTGSN*NTGWPR Trigger: CCTGGGCCACCCAGTATTGCAGTTGGACCCAGTGCC...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | GGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTATTGGCGCTGGGGTTaGGGCGCACACATCGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLARFSIFSGKMRASQGMYWRWG*GAHIAH Trigger: ATGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATA...CATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCCAGCCCAGGCTCTaGTGGCATTTCCAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGIQPRL*WHFQLP Trigger: GGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTGGAT...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAGGGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTATCCAGCCCAGGCTCTaGTGGCATTTCCAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QEQGVESGLLWPSSILHLIQPRL*WHFQLP Trigger: GGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTGGAT...AAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCCCTGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACCAGATTCCTTCAGCATaGGCAGGTGTGCACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYQIPSA*AGVHRG Trigger: GCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTG...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | CGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCAGAGCCAGGCCAGCTaGTCGTTCCGTGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSIFSGKMRASQGMFLSQSQAS*SFRATS Trigger: GGAGGTGGCACGGAACGACCAGCTGGCCTGGCTCTG...GGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCCATCGCCCATGGCCATaGCACTGGGTCCAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDRWYGCSAKHPGSTAYSHRPWP*HWVQLQ Trigger: TTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATG...GGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCCGCACACATCGCCCATaGCCATGGCACTGGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGRTHRP*PWHWVQ Trigger: TTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCG...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCGGAAGGTATTGGCGCTaGGGTTGCGGCGCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGGRYWR*GCGAHI Trigger: GATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCC...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCGAAGCTGGGGTTCACTaGGGGTATGGCCAGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSEAGVH*GYGQAL Trigger: TAGTGCCTGGCCATACCCCCAGTGAACCCCAGCTTC...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | GTTGAGACAGACTGGAGCCCAGCTGTGTGGATGAGGAAGGGCGGAACTCCAGCTCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VETDWSPAVWMRKGGTPAPEHGN*QSCGCV Trigger: TACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGG...AGCTGGAGTTCCGCCCTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACATTGGCATGGTGGGTGTaGGCCACTCGAAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLWQDEGISGDVSLPLRTLAWWV*ATRRAS Trigger: GGAGGCCCTTCGAGTGGCTCACACCCACCATGCCAA...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAAGGGCGGAACTCCAGCTGTTCAAGATAGCATTTCCTCTTCCTGGGAAGATGGCCAGTCAGGGTaGCGACTGGCCACCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRKGGTPAVQDSISSSWEDGQSG*RLATSW Trigger: CCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATC...TTCCCAGGAAGAGGAAATGCTATCTTGAACAGCTGGAGTTCCGCCCTTCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTGAGAAGCGGGGTTGAGACAGACTGGAGCCCAGCTGTGTGGATGAGGAAGGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRSGVETDWSPAVWMRKVLGSD*LDVTES Trigger: ACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCAC...CTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCGTCCAACTGCAATACTaGGTGGCCCAGGACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSVQLQY*VAQDTL Trigger: CAACGTGTCCTGGGCCACCCAGTATTGCAGTTGGAC...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACATCGCCCATGGCCATaGCACTGGGTCCAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DRWYGCSAKHPGSTAYSRHRPWP*HWVQLQ Trigger: TTGCAGTTGGACCCAGTGCCATGGCCATGGGCGATG...TCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGGAAGGTATTGGCGCTaGGGTTGCGGCGCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: GVESGLLWPSSILHLLWQGRYWR*GCGAHI Trigger: GATGTGTGCGCCGCAACCCCAGCGCCAATACCTTCC...TTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACAGGTGCAGGAAGGTATTaGCGCTGGGGTTGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLWQDEGISGDVSLPLRTGAGRY*RWGCGA Trigger: TGCGCCGCAACCCCAGCGCCAATACCTTCCTGCACC...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCGAAGCTGGGGTTCACTaGGGGTATGGCCAGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGEAGVH*GYGQAL Trigger: TAGTGCCTGGCCATACCCCCAGTGAACCCCAGCTTC...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | CTAGTGAGAAGCGGGGTTGAGACAGACTGGAGCCCAGCTGTGTGGATGAGGAAGCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVRSGVETDWSPAVWMRKPEHGN*QSCGCV Trigger: TACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGG...CTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KEILAPEASWTDIQGERSPEHGN*QSCGCV Trigger: TACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGG...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | GGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTGGCCCAGGACACGTTaGCTATGTAGGGAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLARFSIFSGKMRASQGMWPRTR*LCREPA Trigger: TGCTGGTTCCCTACATAGTCAACGTGTCCTGGGCCA...CATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | CGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCAGGGAAAGAGAGCCGTaGTCTCAGCCCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSIFSGKMRASQGMFLSREREP*SQPRAR Trigger: CCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCT...GGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | AGCCCACGCATGAACCCACAAAGTCAAAGGTTACACATTCTGACCCCAAAGTCACAGAGCCAGGCCAGCTaGTCGTTCCGTGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRMNPQSQRLHILTPKSQSQAS*SFRATS Trigger: GGAGGTGGCACGGAACGACCAGCTGGCCTGGCTCTG...TGACTTTGGGGTCAGAATGTGTAACCTTTGACTTTGTGGGTTCATGCGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCGAGATAAGGTCCACCTaGCTCAGTCCCGTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGEIRST*LSPVSP Trigger: AGGACTCACGGGACTGAGCCAGGTGGACCTTATCTC...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGAGGGCGTCCAACTGCAATACTaGGTGGCCCAGGACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWPSSILHLLWQDEGVQLQY*VAQDTL Trigger: CAACGTGTCCTGGGCCACCCAGTATTGCAGTTGGAC...GCCCTCATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACCATGGCCATGGCACTaGGTCCAACTGCAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRWYGCSAKHPGSTAYSRPWPWH*VQLQYW Trigger: CCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGG...TCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATCGCACACATCGCCCATaGCCATGGCACTGGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VESGLLWPSSILHLLWQDRTHRP*PWHWVQ Trigger: TTGGACCCAGTGCCATGGCCATGGGCGATGTGTGCG...ATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGGTTCACTGGGGGTATaGCCAGGCACTAGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VESGLLWPSSILHLLWQDGSLGV*PGTRRK Trigger: CTTCCGCCTAGTGCCTGGCCATACCCCCAGTGAACC...ATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACAGCCCAGGCTCTGCTaGCATTTCCAGCTGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSGKMRASQGMFLSPLEQPRLC*HFQLPP Trigger: AGGGGGCAGCTGGAAATGCCAGCAGAGCCTGGGCTG...TTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | TATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACTTTTGTCTTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YGCSAKHPGSTAYSRLLSCGHVP*YHKGSA Trigger: GGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACA...AGACAAAAGTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVESGLLWPSSILHLLWQVLGSD*LDVTES Trigger: ACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCAC...TTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | TCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCAGGGAAAGAGAGCCGTaGTCTCAGCCCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SILHLLWQDEGISGDVSLREREP*SQPRAR Trigger: CCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCT...GAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGCTGTTCAAGATAGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCTCCAGTGGCACTTTGTaGCGTGGGGCACATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPAVQDSISSSWEQGGGASSGTL*RGAHSC Trigger: ACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGA...GGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCTATCTTGAACAGCTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | GCTGACCTTAGGACAGTTCTAGACAGGCAGAGGCCGCTCTGCCCATTTCTATCCTCCAGTGGCACTTTGTaGCGTGGGGCACATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLRTVLDRQRPLCPFLSSSGTL*RGAHSC Trigger: ACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGA...GGATAGAAATGGGCAGAGCGGCCTCTGCCTGTCTAGAACTGTCCTAAGGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTCTTGGGTCCAGGGACAAAGCTGCTATGCTTAGGAGATAAGCTATACAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLGPGTKLLCLGDKLYSQGAD*PPAGVK Trigger: CTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACT...GTATAGCTTATCTCCTAAGCATAGCAGCTTTGTCCCTGGACCCAAGAGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAAAAGCCCCACAGGTGCTaGGGTCTGACTGCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: IFSGKMRASQGMFLSPLEKPHRC*GLTALT Trigger: CGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTT...TTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGAGATAAGGTCCACCTaGCTCAGTCCCGTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVESGLLWPSSILHLLWQEIRST*LSPVSP Trigger: AGGACTCACGGGACTGAGCCAGGTGGACCTTATCTC...TTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAACCATGGCCATGGCACTaGGTCCAACTGCAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVESGLLWPSSILHLLWQPWPWH*VQLQYW Trigger: CCAGTATTGCAGTTGGACCCAGTGCCATGGCCATGG...TTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTACTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | CGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCGGAAGCTGCTGGCATTaGGGTGCAGGAAGGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSIFSGKMRASQGMFLSGSCWH*GAGRYW Trigger: CCAATACCTTCCTGCACCTCAATGCCAGCAGCTTCC...GGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | TATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGACTTTTGTCTGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGCSAKHPGSTAYSRLLSVLGSD*LDVTES Trigger: ACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCAC...AGACAAAAGTCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR GCA 90 bp | AGCCCACGCATGAACCCACAAAGTCAAAGGTTACACATTCTGACCCCAAAGTCAAGGGAAAGAGAGCCGTaGTCTCAGCCCAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRMNPQSQRLHILTPKSREREP*SQPRAR Trigger: CCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCT...TGACTTTGGGGTCAGAATGTGTAACCTTTGACTTTGTGGGTTCATGCGTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | AGCATTTCCTCTTCCTGGGAACAGGGTGGGGGTGCCCTTCTTCCCTCTTGGGTCAACTCAAACTCGTACTaGGCCTGCTTCATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SISSSWEQGGGALLPSWVNSNSY*ACFITL Trigger: CAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTT...GACCCAAGAGGGAAGAAGGGCACCCCCACCCTGTTCCCAGGAAGAGGAAATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACAACTCAAACTCGTACTaGGCCTGCTTCATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGDRWYGCSAKHPGSTAYNSNSY*ACFITL Trigger: CAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTT...GTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR TCA 90 bp | TCGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCTGGCCCAGGACACGTTaGCTATGTAGGGAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SILHLLWQDEGISGDVSLWPRTR*LCREPA Trigger: TGCTGGTTCCCTACATAGTCAACGTGTCCTGGGCCA...GAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACATCCAGTGGCACTTTGTaGCGTGGGGCACATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLWQDEGISGDVSLPLRTSSGTL*RGAHSC Trigger: ACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGA...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAATCCAGTGGCACTTTGTaGCGTGGGGCACATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSGKMRASQGMFLSPLESSGTL*RGAHSC Trigger: ACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGA...TTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | GACAGATGGTATGGGTGCTCTGCTAAGCATCCTGGGAGCACTGCCTACTCCAGAAACTCAAACTCGTACTaGGCCTGCTTCATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRWYGCSAKHPGSTAYSRNSNSY*ACFITL Trigger: CAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTT...TCTGGAGTAGGCAGTGCTCCCAGGATGCTTAGCAGAGCACCCATACCATCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTCTTGGGTCCAGGGACAAAGCTGCTATGCTTAGGAGATAAGCTATACGAGATAAGGTCCACCTaGCTCAGTCCCGTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLGPGTKLLCLGDKLYEIRST*LSPVSP Trigger: AGGACTCACGGGACTGAGCCAGGTGGACCTTATCTC...GTATAGCTTATCTCCTAAGCATAGCAGCTTTGTCCCTGGACCCAAGAGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193747.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACAAACTCAAACTCGTACTaGGCCTGCTTCATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLWQDEGISGDVSLPLRTNSNSY*ACFITL Trigger: CAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTT...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CCA 90 bp | CTAGGCAAGCACTCTACTGAGGCACATCCCTGGCATATTTATTTGTATATGTATAAGCCCCACAGGTGCTaGGGTCTGACTGCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSTEAHPWHIYLYMYKPHRC*GLTALT Trigger: CGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTT...ATACATATACAAATAAATATGCCAGGGATGTGCCTCAGTAGAGTGCTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS GCA 90 bp | GAGAGCCGTGCTCTCAGCCCAGAGCCAGGCCAGCTGGTCGTTCCGTaGCACCTCCACATCGGGACAGCGGCCCGTGTAGCTCTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESRALSPEPGQLVVP*HLHIGTAARVALPV Trigger: AACTGGGAGAGCTACACGGGCCGCTGTCCCGATGTGGAGGTGGCACGGAACGACCAGCTGGCCTGGCTCTGGGCTGAGAGCACGGCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 90 bp | AGGACGCCAGTGTCTCGTCCAGGTACACAGAGGGAAAGAGAGCCGTaGTCTCAGCCCAGAGCCAGGCCAGCTGGTCGTTCCGTGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RTPVSRPGTQREREP*SQPRARPAGRSVPP Trigger: AGGTGGCACGGAACGACCAGCTGGCCTGGCTCTGGGCTGAGAGCACGGCTCTCTTTCCCTCTGTGTACCTGGACGAGACACTGGCGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 90 bp | GAGCCCAGGGCGGCACTCTCACCGATGGTAGAGATAAGGTCCACCTaGCTCAGTCCCGTGAGTCCTCGGGTGTATGTGGGACGCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EPRAALSPMVEIRST*LSPVSPRVYVGRVK Trigger: CTTCACGCGTCCCACATACACCCGAGGACTCACGGGACTGAGCCAGGTGGACCTTATCTCTACCATCGGTGAGAGTGCCGCCCTGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGAGGTGCAGGAAGGTATaGGCGCTGGGGTTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: APHAKEILAPEASWTDIQRCRKV*ALGLRR Trigger: GCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCT...CTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | AGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGTGCAGGAAGGTATaGGCGCTGGGGTTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPLMPRRSLHQRPAGLISRCRKV*ALGLRR Trigger: GCGCCGCAACCCCAGCGCCAATACCTTCCTGCACCT...GGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS TCA 90 bp | CGCGTGAAGACGTACACGGGGAGGGCGTGGTTGGCATGGTGGGTGTaGGCCACTCGAAGGGCCTCCCGAACACGGAAACTGACAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVKTYTGRAWLAWWV*ATRRASRTRKLTKL Trigger: CAACTTTGTCAGTTTCCGTGTTCGGGAGGCCCTTCGAGTGGCTCACACCCACCATGCCAACCACGCCCTCCCCGTGTACGTCTTCACGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 90 bp | TGGCACTTTGTGGCGTGGGGCACATTCTTGTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCCAGTGAAGATGGGCGGCGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WHFVAWGTFLCGHVP*YHKGSASEDGRRCG Trigger: CCCACAGCGCCGCCCATCTTCACTGGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | CCTAACAGGCCCCTCATGCCAAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: PNRPLMPRRSLHQRPAGLAWGTF*CGHVPC Trigger: GCATGGAACGTGCCCACACAAGAATGTGCCCCACGC...CAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTTGGCATGAGGGGCCTGTTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS TCA 90 bp | CATGGTGGGTGTGAGCCACTCGAAGGGCCTCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTACGGAGGACGCCAGTGTCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGGCEPLEGPPEHGN*QSCGCVRRTPVSRP Trigger: TGGACGAGACACTGGCGTCCTCCGTACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGGAGGCCCTTCGAGTGGCTCACACCCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 90 bp | AGCGTTCCACAGATTCCTTCAGCATGGGCAGGTGTGCACAGAGGCTaGCGTTCTGAGGCACACCGCCATGCACAGATGTCCCGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVPQIPSAWAGVHRG*RSEAHRHAQMSRLH Trigger: ATGCAGCCGGGACATCTGTGCATGGCGGTGTGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGTGGAACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 90 bp | CAGGCTCCTGGGTCTGGATGTAGCGTTCCACAGATTCCTTCAGCATaGGCAGGTGTGCACAGAGGCTGCCGTTCTGAGGCACACCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAPGSGCSVPQIPSA*AGVHRGCRSEAHRH Trigger: ATGGCGGTGTGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGTGGAACGCTACATCCAGACCCAGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | CTAGTGAGAAGCGGGGTTGAGACAGACTGGAGCCCAGCTGTGTGGATGAGGAAGGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LVRSGVETDWSPAVWMRKAWGTF*CGHVPC Trigger: GCATGGAACGTGCCCACACAAGAATGTGCCCCACGC...CTTCCTCATCCACACAGCTGGGCTCCAGTCTGTCTCAACCCCGCTTCTCACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193747.2 ENSMUST00000195681.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGATCCTTGCACCAGAGGCCAGCTGGACTGATATCCAGGGGGAGAGATCCGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: KEILAPEASWTDIQGERSAWGTF*CGHVPC Trigger: GCATGGAACGTGCCCACACAAGAATGTGCCCCACGC...GGATCTCTCCCCCTGGATATCAGTCCAGCTGGCCTCTGGTGCAAGGATCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS GCA 90 bp | GGTCTGGATGTAGCGTTCCACAGATTCCTTCAGCATGGGCAGGTGTaGACAGAGGCTGCCGTTCTGAGGCACACCGCCATGCACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GLDVAFHRFLQHGQV*TEAAVLRHTAMHRC Trigger: ACATCTGTGCATGGCGGTGTGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGTGGAACGCTACATCCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 90 bp | GCAGTCAGGAAAGAGGTAGAAGCCCCACAGGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGTGTTCAACATGAACTGCCGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVRKEVEAPQVLGSD*LDVTESVQHELPSG Trigger: GCCGCTCGGCAGTTCATGTTGAACACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTTCTACCTCTTTCCTGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | CGATTCTCCATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCGTATTGGCGCTGGGGTaGCGGCGCACACATCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RFSIFSGKMRASQGMFLSVLALG*RRTHRP Trigger: TGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATAC...GGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGATGGAGAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
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| CDS GCA 90 bp | TTCAACATGAACTGCCGAGCGGCGAACTCAAACTCGTACTGGGCCTaGTTCATTACTCTGTCTGATGGCCAGTCAGGGTGCCGACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FNMNCRAANSNSYWA*FITLSDGQSGCRLA Trigger: GGCCAGTCGGCACCCTGACTGGCCATCAGACAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTTCGCCGCTCGGCAGTTCATGTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 90 bp | AGCCTTCACATCGAAGGCCCTAAGGTCCAGTGGCACTTTGTGGCGTaGGGCACATTCTTGTGTGGGCACGTTCCATGCTACCACAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHIEGPKVQWHFVA*GTFLCGHVPCYHKG Trigger: CCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 90 bp | GGTGTAGCCTTCACATCGAAGGCCCTAAGGTCCAGTGGCACTTTGTaGCGTGGGGCACATTCTTGTGTGGGCACGTTCCATGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVAFTSKALRSSGTL*RGAHSCVGTFHATT Trigger: TGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGCTACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 90 bp | ACCCTCATTCGGTGTAGCCTTCACATCGAAGGCCCTAAGGTCCAGTaGCACTTTGTGGCGTGGGGCACATTCTTGTGTGGGCACGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLIRCSLHIEGPKVQ*HFVAWGTFLCGHVP Trigger: TGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGCTACACCGAATGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 90 bp | GGGCCTGCTTCATTACTCTGTCTGATGGCCAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAGACTGTCGGTAAACATCTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPASLLCLMASQGAD*PPAGVKTVGKHLSP Trigger: AGGAGAAAGATGTTTACCGACAGTCTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATCAGACAGAGTAATGAAGCAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAAGTATTGGCGCTGGGGTaGCGGCGCACACATCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFSGKMRASQGMFLSPLEVLALG*RRTHRP Trigger: TGGGCGATGTGTGCGCCGCAACCCCAGCGCCAATAC...TTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010191.13 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | GTAGAGTCAGGCCTTCTCTGGCCTAGCTCGATTCTCCATCTTCTCTGGCAAGATGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VESGLLWPSSILHLLWQDAWGTF*CGHVPC Trigger: GCATGGAACGTGCCCACACAAGAATGTGCCCCACGC...ATCTTGCCAGAGAAGATGGAGAATCGAGCTAGGCCAGAGAAGGCCTGACTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 90 bp | AGAGTGTTCAACATGAACTGCCGAGCGGCGAACTCAAACTCGTACTaGGCCTGCTTCATTACTCTGTCTGATGGCCAGTCAGGGTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVFNMNCRAANSNSY*ACFITLSDGQSGCR Trigger: TCGGCACCCTGACTGGCCATCAGACAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTTCGCCGCTCGGCAGTTCATGTTGAACACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTGGCAAGATGAGGGCATCTCAGGGGATGTTTCTCTCCCCCTTAGAACAAGGTCCAGTGGCACTTaGTGGCGTGGGGCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLWQDEGISGDVSLPLRTRSSGT*WRGAHS Trigger: AGAATGTGCCCCACGCCACAAAGTGCCACTGGACCT...TGTTCTAAGGGGGAGAGAAACATCCCCTGAGATGCCCTCATCTTGCCAGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS TCA 72 bp | ACGTACACGGGGAGGGCGTGGTTGGCATGGTGGGTGTaGGCCACTCGAAGGGCCTCCCGAACACGGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: TYTGRAWLAWWV*ATRRASRTRKL Trigger: CAGTTTCCGTGTTCGGGAGGCCCTTCGAGTGGCTCACACCCACCATGCCAACCACGCCCTCCCCGTGTACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 72 bp | GTGGCGTGGGGCACATTCTTGTGTGGGCACGTTCCATaGTACCACAAAGGGTCGGCCAGTGAAGATGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VAWGTFLCGHVP*YHKGSASEDGR Trigger: CCGCCCATCTTCACTGGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS TCA 72 bp | TGTGAGCCACTCGAAGGGCCTCCCGAACACGGAAACTaGCAAAGTTGCGGCTGTGTACGGAGGACGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CEPLEGPPEHGN*QSCGCVRRTPV Trigger: CACTGGCGTCCTCCGTACACAGCCGCAACTTTGTCAGTTTCCGTGTTCGGGAGGCCCTTCGAGTGGCTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS GCA 72 bp | GTAGCGTTCCACAGATTCCTTCAGCATGGGCAGGTGTaGACAGAGGCTGCCGTTCTGAGGCACACCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VAFHRFLQHGQV*TEAAVLRHTAM Trigger: CATGGCGGTGTGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGTGGAACGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 72 bp | CCAGTGGCACTTTGTGGCGTGGGGCACATTCTTGTGTaGGCACGTTCCATGCTACCACAAAGGGTCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVALCGVGHILV*ARSMLPQRVGQ Trigger: CTGGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 72 bp | GCGGCACTCTCACCGATGGTAGAGATAAGGTCCACCTaGCTCAGTCCCGTGAGTCCTCGGGTGTATGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AALSPMVEIRST*LSPVSPRVYVG Trigger: TCCCACATACACCCGAGGACTCACGGGACTGAGCCAGGTGGACCTTATCTCTACCATCGGTGAGAGTGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195752.6 |
||
| CDS CAA 90 bp | GAAGGCCCTAAGGTCCAGTGGCACTTTGTGGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGCTACCACAAAGGGTCGGCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGPKVQWHFVAWGTF*CGHVPCYHKGSASE Trigger: TTCACTGGCCGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS TCA 72 bp | TGGCCAGTCAGGGTGCCGACTGGCCACCAGCTGGCGTaGAGACTGTCGGTAAACATCTTTCTCCTGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WPVRVPTGHQLA*RLSVNIFLLPV Trigger: AACTGGCAGGAGAAAGATGTTTACCGACAGTCTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CCA 72 bp | GGGTCTGGATGTAGCGTTCCACAGATTCCTTCAGCATaGGCAGGTGTGCACAGAGGCTGCCGTTCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGCSVPQIPSA*AGVHRGCRSEA Trigger: TGCCTCAGAACGGCAGCCTCTGTGCACACCTGCCCATGCTGAAGGAATCTGTGGAACGCTACATCCAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
||
| CDS CAA 72 bp | GCCTTCACATCGAAGGCCCTAAGGTCCAGTGGCACTTaGTGGCGTGGGGCACATTCTTGTGTGGGCACGTTC | + |
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Preference number: 6 (lower is better) Translates to: AFTSKALRSSGT*WRGAHSCVGTF Trigger: GAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CAA 90 bp | TTCGGTGTAGCCTTCACATCGAAGGCCCTAAGGTCCAGTGGCACTTaGTGGCGTGGGGCACATTCTTGTGTGGGCACGTTCCATGCTACC | + |
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Preference number: 6 (lower is better) Translates to: FGVAFTSKALRSSGT*WRGAHSCVGTFHAT Trigger: GGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGATGTGAAGGCTACACCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS GCA 72 bp | AACTGCCGAGCGGCGAACTCAAACTCGTACTGGGCCTaGTTCATTACTCTGTCTGATGGCCAGTCAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NCRAANSNSYWA*FITLSDGQSGC Trigger: GCACCCTGACTGGCCATCAGACAGAGTAATGAAGCAGGCCCAGTACGAGTTTGAGTTCGCCGCTCGGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 72 bp | ATCGAAGGCCCTAAGGTCCAGTGGCACTTTGTGGCGTaGGGCACATTCTTGTGTGGGCACGTTCCATGCTAC | + |
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Preference number: 6 (lower is better) Translates to: IEGPKVQWHFVA*GTFLCGHVPCY Trigger: GTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTTAGGGCCTTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CAA 72 bp | AAGGTCCAGTGGCACTTTGTGGCGTGGGGCACATTCTaGTGTGGGCACGTTCCATGCTACCACAAAGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: KVQWHFVAWGTF*CGHVPCYHKGS Trigger: CGACCCTTTGTGGTAGCATGGAACGTGCCCACACAAGAATGTGCCCCACGCCACAAAGTGCCACTGGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010191.13 ENSMUST00000192887.6 ENSMUST00000193747.2 ENSMUST00000194794.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS CCA 72 bp | TCATTACTCTGTCTGATGGCCAGTCAGGGTGCCGACTaGCCACCAGCTGGCGTGAAGACTGTCGGTAAACAT | + |
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Preference number: 6 (lower is better) Translates to: SLLCLMASQGAD*PPAGVKTVGKH Trigger: ATGTTTACCGACAGTCTTCACGCCAGCTGGTGGCCAGTCGGCACCCTGACTGGCCATCAGACAGAGTAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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| CDS GCA 72 bp | ATGGAACAGTACTTCTGGTCCCCGATAACACAAGCATaGAGTGGCTCCCGGAGGAAGGGAGAACACGTACCT | + |
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Preference number: 6 (lower is better) Translates to: MEQYFWSPITQA*SGSRRKGEHVP Trigger: AGGTACGTGTTCTCCCTTCCTCCGGGAGCCACTGCATGCTTGTGTTATCGGGGACCAGAAGTACTGTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195681.2 |
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| CDS GCA 72 bp | AAAGAGGTAGAAGCCCCACAGGTGCTGGGGTCTGACTaGCTTGACGTAACGGAGAGTGTTCAACATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: KEVEAPQVLGSD*LDVTESVQHEL Trigger: CAGTTCATGTTGAACACTCTCCGTTACGTCAAGGCAGTCAGACCCCAGCACCTGTGGGGCTTCTACCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010191.13 ENSMUST00000193747.2 ENSMUST00000195681.2 ENSMUST00000195752.6 |
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