Pregenerated sensors for HUS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020413Ensembl transcript IDs: ENSMUST00000020683.10, ENSMUST00000129115.2
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCACACAGGCTCCACATGCAGTAGCTGTATACTCAACAGTGTGGTaGGAGCCTGGCATGCTGCAGGGACAGAGGGGCTGTCCGTTTCGC | + |
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Preference number: 1 (lower is better) Translates to: ITQAPHAVAVYSTVW*EPGMLQGQRGCPFR Trigger: GCGAAACGGACAGCCCCTCTGTCCCTGCAGCATGCCAGGCTCTCACCACACTGTTGAGTATACAGCTACTGCATGTGGAGCCTGTGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR GCA 90 bp | CTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTaGAGTGGCTGCAGGGCCTGCAGGAAGACAGCGTTTCTAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LLGEHPCRNGKAVKL*SGCRACRKTAFLDR Trigger: TCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | AGCTCCAATCCAGGAGCAGGACACACCCTCAGCACGTCACAGATATaGCAGACAGCCGAGCTTCGACTGCTTTACACAAAACAACGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SSNPGAGHTLSTSQI*QTAELRLLYTKQRS Trigger: GGAACGTTGTTTTGTGTAAAGCAGTCGAAGCTCGGCTGTCTGTCATATCTGTGACGTGCTGAGGGTGTGTCCTGCTCCTGGATTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | AGAGAGATAACCAGGTGCCCAAGAGGGAAGGCACAGAGTGAAAGGTaGGGAACAACTGTGGATGGAGTGACAGCCATAGAACCCTCAACC | + |
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Preference number: 1 (lower is better) Translates to: REITRCPRGKAQSER*GTTVDGVTAIEPST Trigger: GGTTGAGGGTTCTATGGCTGTCACTCCATCCACAGTTGTTCCTCACCTTTCACTCTGTGCCTTCCCTCTTGGGCACCTGGTTATCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR GCA 90 bp | GAACTGCTTTTCAGACTTCCAAGAGCACGATTCTCTGTGGCAAGATaGACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: ELLFRLPRARFSVAR*TAGQTQPGDLMMGR Trigger: CCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCATCTTGCCACAGAGAATCGTGCTCTTGGAAGTCTGAAAAGCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR GCA 90 bp | GAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTGCAGTGGCTaGAGGGCCTGCAGGAAGACAGCGTTTCTAGACAGATTTACTATA | + |
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Preference number: 1 (lower is better) Translates to: EHPCRNGKAVKLCSG*RACRKTAFLDRFTI Trigger: TATAGTAAATCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | CAGGACAGTCTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTaGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGG | + |
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Preference number: 1 (lower is better) Translates to: QDSLKISVQDKLPGM*VLSPGRQGQGVAYR Trigger: CCGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAGACTGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR GCA 90 bp | TGTAGAAATGGCAAGGCCGTCAAGCTTTGCAGTGGCTGCAGGGCCTaGAGGAAGACAGCGTTTCTAGACAGATTTACTATACAAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: CRNGKAVKLCSGCRA*RKTAFLDRFTIQGW Trigger: CCATCCTTGTATAGTAAATCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | CCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGCTCTCATATGTATaGAAGTACTCTCCAAACCTCAGAGTTTTAGGCAGTCATAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: PGRQGQGVAYRLSYV*KYSPNLRVLGSHSK Trigger: CTTACTATGACTGCCTAAAACTCTGAGGTTTGGAGAGTACTTCCATACATATGAGAGCCGGTAAGCTACCCCCTGACCTTGCCTGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | CATAGGGAGCGAAATAAGCCAAGTACAGATGTGCGGATAGGCAGCTaGCTGACCATATCGTCCAGTGCTTCTCTCATAGTGACAAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: HRERNKPSTDVRIGS*LTISSSASLIVTKV Trigger: GACCTTTGTCACTATGAGAGAAGCACTGGACGATATGGTCAGTCAGCTGCCTATCCGCACATCTGTACTTGGCTTATTTCGCTCCCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
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| 3UTR CCA 90 bp | ACAACACACAGTAAAATGTCTCTGGTCTCAGTCTCCACCTCAGGATaGGGTTTCACAAAGCAGCTCCCAGTTCTCCTAACCTGGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: TTHSKMSLVSVSTSG*GFTKQLPVLLTWLS Trigger: AGAAAGCCAGGTTAGGAGAACTGGGAGCTGCTTTGTGAAACCCCATCCTGAGGTGGAGACTGAGACCAGAGACATTTTACTGTGTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | GAAAGTCCATCTCCAAACTGCAGACAACACACAGTAAAATGTCTCTaGTCTCAGTCTCCACCTCAGGATGGGGTTTCACAAAGCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ESPSPNCRQHTVKCL*SQSPPQDGVSQSSS Trigger: GGAGCTGCTTTGTGAAACCCCATCCTGAGGTGGAGACTGAGACCAGAGACATTTTACTGTGTGTTGTCTGCAGTTTGGAGATGGACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | TTCTCAGCTCCCTCCCTTGACTACAGCTCCTTGAGACATAAGCTATaGAAGGAACACTACGCAGAAAGTTGTGGCAAGAACCAGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: FSAPSLDYSSLRHKL*KEHYAESCGKNQRD Trigger: GTCTCTCTGGTTCTTGCCACAACTTTCTGCGTAGTGTTCCTTTCATAGCTTATGTCTCAAGGAGCTGTAGTCAAGGGAGGGAGCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | CACATTATGAGACTTTGTATAGGAGTCTGTTCTGGTCTGTTCACATaGGACAGTGTGAGCAGAGCAGCGCTAGCCTACCCAGGCCATTTA | + |
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Preference number: 1 (lower is better) Translates to: HIMRLCIGVCSGLFT*DSVSRAALAYPGHL Trigger: TAAATGGCCTGGGTAGGCTAGCGCTGCTCTGCTCACACTGTCTCATGTGAACAGACCAGAACAGACTCCTATACAAAGTCTCATAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR GCA 90 bp | TACTCCACTAATTGGGTGACGTTTACCAAGAATGTCATCAGCCACTaGTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGAACTAATGTT | + |
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Preference number: 1 (lower is better) Translates to: YSTNWVTFTKNVISH*SWWKNQNSRPRTNV Trigger: AACATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGTGGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | AATTGGGTGACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTaGAAGAACCAGAATTCCCGCCCCAGAACTAATGTTGAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: NWVTFTKNVISHCSW*KNQNSRPRTNVELL Trigger: AAGCAGTTCAACATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | ACTAATTGGGTGACGTTTACCAAGAATGTCATCAGCCACTGCTCCTaGTGGAAGAACCAGAATTCCCGCCCCAGAACTAATGTTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: TNWVTFTKNVISHCS*WKNQNSRPRTNVEL Trigger: CAGTTCAACATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | CATTTGGCTTCCCCACATTATGAGACTTTGTATAGGAGTCTGTTCTaGTCTGTTCACATGAGACAGTGTGAGCAGAGCAGCGCTAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: HLASPHYETLYRSLF*SVHMRQCEQSSASL Trigger: TAGGCTAGCGCTGCTCTGCTCACACTGTCTCATGTGAACAGACCAGAACAGACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | ACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTaGCGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: TELHLLKTKGTPLIG*RLPRMSSATAPGGR Trigger: TCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | AAGTACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTaGGTGACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: KYRITSLKNKGYSTN*VTFTKNVISHCSWW Trigger: CCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | CTAACTTTCCAGCAACAAGACGACTACCCTGAATTCTCCAAATTTTaGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LTFQQQDDYPEFSKF*SEAVKPIGSQRNAK Trigger: TTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTTGGAGAATTCAGGGTAGTCGTCTTGTTGCTGGAAAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR TCA 90 bp | TGGAAGTACTCTCCAAACCTCAGAGTTTTAGGCAGTCATAGTAAGTaGAAGTCCATCTCCAAACTGCAGACAACACACAGTAAAATGTCT | + |
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Preference number: 1 (lower is better) Translates to: WKYSPNLRVLGSHSK*KSISKLQTTHSKMS Trigger: AGACATTTTACTGTGTGTTGTCTGCAGTTTGGAGATGGACTTTCACTTACTATGACTGCCTAAAACTCTGAGGTTTGGAGAGTACTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CCA 90 bp | TTTACACAAAACAACGTTCCTTACAGAAGGGTAGATCTGACACTGTaGAAGCATTATACAAAATTACGATATAAAGGACTGGAGATAGAG | + |
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Preference number: 1 (lower is better) Translates to: FTQNNVPYRRVDLTL*KHYTKLRYKGLEIE Trigger: CTCTATCTCCAGTCCTTTATATCGTAATTTTGTATAATGCTTCCACAGTGTCAGATCTACCCTTCTGTAAGGAACGTTGTTTTGTGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGAGTTTGGCACACAGTaGCTGCCTAGCATGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: TRNVGSKPWQARSGGSLPEFGTQ*LPSMNP Trigger: TGGGTTCATGCTAGGCAGGCACTGTGTGCCAAACTC...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGCTAAGATGGGAACTGTGTaGGCTGGGGGTAGGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: RNVGSKPWQARSGGSLPAKMGTV*AGGRFV Trigger: CACAAACCTACCCCCAGCCCACACAGTTCCCATCTT...AGCCGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGACTCAGCTCCCTCCCTTaGCTACAGCTCCTTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: KNVISHCSWWKNQNSRPRLSSLP*LQLLET Trigger: TGTCTCAAGGAGCTGTAGTCAAGGGAGGGAGCTGAG...TCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTGGCTGCAGGGCCTGCAGGAAGACAGCGTTTCTAGACAGATTTACTATAGTGGGTTCTAAGCCCTaGCAGGCAAGGTCAGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: CSGCRACRKTAFLDRFTIVGSKP*QARSGG Trigger: ACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCAC...TATAGTAAATCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCCACGGTGGAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGCGTCAAGCTTTGCAGTaGCTGCAGGGCCTGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DSTVEIDRSWHLASPHYERQALQ*LQGLQE Trigger: TTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACG...CTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTGACTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTTACTCAACAGTGTGGTaGGAGCCTGGCATGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KCDCWESTLVEMARPSSFYSTVW*EPGMLQ Trigger: CTGCAGCATGCCAGGCTCTCACCACACTGTTGAGTA...AAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCCAGGCTGGGAGCTCTaGAGGTTCCTCAGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DVYQECHQPLLLVEEPEFPGWEL*RFLRLS Trigger: AGAGAGCCTGAGGAACCTGCAGAGCTCCCAGCCTGG...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTGCAGTGGCTGCAGGGCCCGGCTCTCATATGTATaGAAGTACTCTCCAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: EHPCRNGKAVKLCSGCRARLSYV*KYSPNL Trigger: GAGGTTTGGAGAGTACTTCCATACATATGAGAGCCG...GGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGGCTGCAGGGCCTGCAGGAAGACAGCGTTTCTAGACAGATTTACTATATACTCAACAGTGTGGTaGGAGCCTGGCATGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CSGCRACRKTAFLDRFTIYSTVW*EPGMLQ Trigger: CTGCAGCATGCCAGGCTCTCACCACACTGTTGAGTA...TATAGTAAATCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGTCTCTGGTCTCAGTCTCCACCTCAGGATGGGGTTTCACAAAGCAGCTCCAGCTCAGTGGCAGAGTaGGTGCTCAGTATGCATGAC | + |
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Preference number: 2 (lower is better) Translates to: KCLWSQSPPQDGVSQSSSSSVAE*VLSMHD Trigger: GTCATGCATACTGAGCACGCACTCTGCCACTGAGCT...GGAGCTGCTTTGTGAAACCCCATCCTGAGGTGGAGACTGAGACCAGAGACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
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| 3UTR-3UTR GCA 90 bp | ATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTTGTATAGGAGTGAGAGCCTGGCATGCTaGAGGGACAGAGGGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: IDRSWHLASPHYETLYRSESLAC*RDRGAV Trigger: GACAGCCCCTCTGTCCCTGCAGCATGCCAGGCTCTC...ACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGACTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTAAGATGGGAACTGTGTaGGCTGGGGGTAGGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: KCDCWESTLVEMARPSSFKMGTV*AGGRFV Trigger: CACAAACCTACCCCCAGCCCACACAGTTCCCATCTT...AAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGAACCCGTGCTCAGTATGCATaGCGCCCTGGTCTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGQSMYSSSEFSLAYTRTRAQYA*RPGLIS Trigger: GGAGATGAGACCAGGGCGTCATGCATACTGAGCACG...GGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTTTGACTACAGCTCCTTaGGACATAAGCTATGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPLTTAP*DISYER Trigger: CCTTTCATAGCTTATGTCTCAAGGAGCTGTAGTCAA...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTCGAGAAGGAAGTGAGTaGACTCGAATCTTCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPREGSE*TRIFSK Trigger: TTTACTGAAGATTCGAGTCCACTCACTTCCTTCTCG...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR CAA 90 bp | GACATGGGCAGAAGCCGAGGTGCAAAGGCTGGGACCAGTATACATTaGACATGCAGATTGCAGATTCTGATTACCAGAGTCAAGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: DMGRSRGAKAGTSIH*TCRLQILITRVKST Trigger: GGTGCTCTTGACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCCTTTGCACCTCGGCTTCTGCCCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTAGTCCATCTCCAAACTaGAGACAACACACAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPSPSPN*RQHTVK Trigger: TTTTACTGTGTGTTGTCTGCAGTTTGGAGATGGACT...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTGGGTTCTAAGCCCTGGCAGTGTGGTGAGAGCCTaGCATGCTGCAGGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKISVQDKLPGMWVLSPGSVVRA*HAAGTE Trigger: CTCTGTCCCTGCAGCATGCCAGGCTCTCACCACACT...GCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCCACGGTGGAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGTCAAAGTGTGACTGCTaGGAGAGCACCCTTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: DSTVEIDRSWHLASPHYESKCDC*ESTLVE Trigger: TTCTACAAGGGTGCTCTCCCAGCAGTCACACTTTGA...CTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCGCAGAGCCAGTGGTGTaGTGGCTCATATCTGTCATA | + |
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Preference number: 2 (lower is better) Translates to: DVYQECHQPLLLVEEPEFAEPVV*WLISVI Trigger: TATGACAGATATGAGCCATCACACCACTGGCTCTGC...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACTTCCAAGAGCACGATTCTCTGTGGCAAGATGCACAGCAGGACAGACTCAATTCTTCTGCATTCCTaGCTCTCTCAGGACAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QTSKSTILCGKMHSRTDSILLHS*LSQDSL Trigger: AAGACTGTCCTGAGAGAGTCAGGAATGCAGAAGAAT...TGAGTCTGTCCTGCTGTGCATCTTGCCACAGAGAATCGTGCTCTTGGAAGTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCACCAGGCTGGGAGCTCTaGAGGTTCCTCAGGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPPGWEL*RFLRLS Trigger: AGAGAGCCTGAGGAACCTGCAGAGCTCCCAGCCTGG...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTCCATCAGAATCCACACAAAAGCACAGAACTGGAGTGTGTCACCACATAAGGACAAGTTCAAGATaGGAACTGTGTGGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DSPSESTQKHRTGVCHHIRTSSR*ELCGLG Trigger: CCCCAGCCCACACAGTTCCCATCTTGAACTTGTCCT...TATGTGGTGACACACTCCAGTTCTGTGCTTTTGTGTGGATTCTGATGGAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTTCCAAGAGCACGATTCTCTGTGGCAAGATGCACAGCAGGACAGACTCAAACAGGATAGGAGCTTaGGAGTTCCAGGACAATCTA | + |
|
Preference number: 2 (lower is better) Translates to: QTSKSTILCGKMHSRTDSNRIGA*EFQDNL Trigger: TAGATTGTCCTGGAACTCCCAAGCTCCTATCCTGTT...TGAGTCTGTCCTGCTGTGCATCTTGCCACAGAGAATCGTGCTCTTGGAAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTTCCAAGAGCACGATTCTCTGTGGCAAGATGCACAGCAGGACAGACTCACGGCTCTCATATGTATaGAAGTACTCTCCAAACCTC | + |
|
Preference number: 2 (lower is better) Translates to: QTSKSTILCGKMHSRTDSRLSYV*KYSPNL Trigger: GAGGTTTGGAGAGTACTTCCATACATATGAGAGCCG...TGAGTCTGTCCTGCTGTGCATCTTGCCACAGAGAATCGTGCTCTTGGAAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTAGCCACTGCTCCTGGTaGAAGAACCAGAATTCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: GWDQYTFDMQIADSDYQSSHCSW*KNQNSR Trigger: GCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCT...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATGGAGTGACAGCCATAGAACCCTCAACCATCTAACAATCCTCCAGCTTGTATACTGGCATCAGGTATaGGGCACAGTGGTGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: GWSDSHRTLNHLTILQLVYWHQV*GTVVKL Trigger: CAATTTCACCACTGTGCCGCATACCTGATGCCAGTA...TACAAGCTGGAGGATTGTTAGATGGTTGAGGGTTCTATGGCTGTCACTCCATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATAGTAAATAGCCAAGTGCCAGTTTCTCCAGGCTaGGAGCTCTGCAGGTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQRKQFQAFPRIVNSQVPVSPG*ELCRFL Trigger: GAGGAACCTGCAGAGCTCCCAGCCTGGAGAAACTGG...CACTTGGCTATTTACTATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTCAGGACAAGTTCAAGATaGGAACTGTGTGGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: AGTSIHLTCRLQILITRVRTSSR*ELCGLG Trigger: CCCCAGCCCACACAGTTCCCATCTTGAACTTGTCCT...GACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTAGGGCGTCAAGCTTTGCAGTaGCTGCAGGGCCTGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TSHWFVTILAALYCIALGRQALQ*LQGLQE Trigger: TTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACG...CCCTAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 90 bp | GAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTaGTATAGGAGTCTGTTCTGGTCTGTTCACATGAGACAGTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EIDRSWHLASPHYET*YRSLFWSVHMRQCE Trigger: CTCACACTGTCTCATGTGAACAGACCAGAACAGACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGAACCCAGCCGAGCTTCGACTaGTTTACACAAAACAACGTT | + |
|
Preference number: 2 (lower is better) Translates to: PGQSMYSSSEFSLAYTRTQPSFD*FTQNNV Trigger: AACGTTGTTTTGTGTAAAGCAGTCGAAGCTCGGCTG...GGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAAGCATAAGTATTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATAGTGGCTGCAGGGCCTaGAGGAAGACAGCGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LTSISIKSKEAVSSFPTDSGCRA*RKTAFL Trigger: TAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACT...ATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAATACTTATGCTTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTGGGTTCTAAGCCCTGGCGAGCATGCTAAACTCTaGAAGCAGACAGCTGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LKISVQDKLPGMWVLSPGEHAKL*KQTAVL Trigger: TAACACAGCTGTCTGCTTTCAGAGTTTAGCATGCTC...GCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTGGGTTCTAAGCCCTGGCTATGTACAGCTCATCTaGGTTCAGCTTGGCTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: LKISVQDKLPGMWVLSPGYVQLI*VQLGLH Trigger: GTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATA...GCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTACTCAGCTCCCTCCCTTaGCTACAGCTCCTTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: PTSHWFVTILAALYCIALLSSLP*LQLLET Trigger: TGTCTCAAGGAGCTGTAGTCAAGGGAGGGAGCTGAG...TAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTAGTGTGGTGAGAGCCTaGCATGCTGCAGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: YRITSLKNKGYSTNWVTFSVVRA*HAAGTE Trigger: CTCTGTCCCTGCAGCATGCCAGGCTCTCACCACACT...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTACCAGTTCTCCTAACCTaGCTTTCTCAGCTCCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PTSHWFVTILAALYCIALPVLLT*LSQLPP Trigger: GGGAGGGAGCTGAGAAAGCCAGGTTAGGAGAACTGG...TAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCATGTAGTAAGGAATGGTaGTTTCAGAGGCCTGGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPCSKEW*FQRPGR Trigger: ACGCCCAGGCCTCTGAAACCACCATTCCTTACTACA...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTCCATCAGAATCCACACAAAAGCACAGAACTGGAGTGTGTCACCACATATATAGGAGTCTGTTCTaGTCTGTTCACATGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: DSPSESTQKHRTGVCHHIYRSLF*SVHMRQ Trigger: CTGTCTCATGTGAACAGACCAGAACAGACTCCTATA...TATGTGGTGACACACTCCAGTTCTGTGCTTTTGTGTGGATTCTGATGGAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTACAAGCATAAGTATTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATAGGGAAGGCACAGAGTaGAAGGTGAGGAACAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LTSISIKSKEAVSSFPTDREGTE*KVRNNC Trigger: ACAGTTGTTCCTCACCTTTCACTCTGTGCCTTCCCT...ATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAATACTTATGCTTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | GACTCTCCATCAGAATCCACACAAAAGCACAGAACTGGAGTGTGTCACCACATAACTGGCTTAAGTGACTaGATTAGGAATTCTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: DSPSESTQKHRTGVCHHITGLSD*IRNSSA Trigger: TGCAGAAGAATTCCTAATGCAGTCACTTAAGCCAGT...TATGTGGTGACACACTCCAGTTCTGTGCTTTTGTGTGGATTCTGATGGAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTTGTATAGGAGTATACAATCCAGGATGTaGCTCACAGCAATCAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IDRSWHLASPHYETLYRSIQSRM*LTAIKV Trigger: CACTTTGATTGCTGTGAGGCACATCCTGGATTGTAT...ACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGACGAGAAGGAAGTGAGTaGACTCGAATCTTCAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VPGQSMYSSSEFSLAYTRREGSE*TRIFSK Trigger: TTTACTGAAGATTCGAGTCCACTCACTTCCTTCTCG...TCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTCATCTGAGTTCAGCTTaGCTTACACAAGAACCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GWDQYTFDMQIADSDYQSHLSSA*LTQEPF Trigger: GAAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATG...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTACAAGCATAAGTATTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATTGTAGTAAGGAATGGTaGTTTCAGAGGCCTGGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: LTSISIKSKEAVSSFPTDCSKEW*FQRPGR Trigger: ACGCCCAGGCCTCTGAAACCACCATTCCTTACTACA...ATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAATACTTATGCTTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTCAGTCCATCTCCAAACTaGAGACAACACACAGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AGTSIHLTCRLQILITRVSPSPN*RQHTVK Trigger: TTTTACTGTGTGTTGTCTGCAGTTTGGAGATGGACT...GACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTACAAGCATAAGTATTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATAGGAACAACTGTGGATaGAGTGACAGCCATAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LTSISIKSKEAVSSFPTDRNNCG*SDSHRT Trigger: GGTTCTATGGCTGTCACTCCATCCACAGTTGTTCCT...ATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAATACTTATGCTTGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTGGGTTCTAAGCCCTGGCAGTAATTTGAAGGAGTaGCTATTCAACTGTGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKISVQDKLPGMWVLSPGSNLKE*LFNCAS Trigger: TGAAGCACAGTTGAATAGTCACTCCTTCAAATTACT...GCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR-3UTR TCA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTGCAGAGCCAGTGGTGTaGTGGCTCATATCTGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: YRITSLKNKGYSTNWVTFAEPVV*WLISVI Trigger: TATGACAGATATGAGCCATCACACCACTGGCTCTGC...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTATACTGGCATCAGGTATaGGGCACAGTGGTGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: PTSHWFVTILAALYCIALYWHQV*GTVVKL Trigger: CAATTTCACCACTGTGCCGCATACCTGATGCCAGTA...TAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCACATCTGAGTTCAGCTTaGCTTACACAAGAACCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPHLSSA*LTQEPF Trigger: GAAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATG...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 90 bp | TTGGGAGTTCCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTaGGCTTACACAAGAACCTTTCTAGTAAAAATGGAAACTACAATG | + |
|
Preference number: 2 (lower is better) Translates to: LGVPGQSMYSSSEFS*AYTRTFLVKMETTM Trigger: CATTGTAGTTTCCATTTTTACTAGAAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAACTCCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTATATGTACAGCTCATCTaGGTTCAGCTTGGCTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: PTSHWFVTILAALYCIALYVQLI*VQLGLH Trigger: GTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATA...TAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCATTGAGACATAAGCTATaGAAGGAACACTACGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPLRHKL*KEHYAE Trigger: TTCTGCGTAGTGTTCCTTTCATAGCTTATGTCTCAA...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATAGTAAATAGCCAAGTGTTGAGACATAAGCTATaGAAGGAACACTACGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRKQFQAFPRIVNSQVLRHKL*KEHYAE Trigger: TTCTGCGTAGTGTTCCTTTCATAGCTTATGTCTCAA...CACTTGGCTATTTACTATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTACTGGCTTAAGTGACTaGATTAGGAATTCTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YRITSLKNKGYSTNWVTFTGLSD*IRNSSA Trigger: TGCAGAAGAATTCCTAATGCAGTCACTTAAGCCAGT...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | TCAAGAGCACCAGGCCCTCCTAGCTGTAGTAAGGAATaGTGGTTTCAGAGGCCTGGGCGTCTTGGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRAPGPPSCSKE*WFQRPGRLGRR Trigger: CCTCCTCCCAAGACGCCCAGGCCTCTGAAACCACCATTCCTTACTACAGCTAGGAGGGCCTGGTGCTCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGACTGCCAATGGAAGCTaGTTCTCCCCCAACGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRNVGSKPWQARSGGSLPTANGS*FSPNVR Trigger: CCTAACGTTGGGGGAGAACAAGCTTCCATTGGCAGT...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | GAGCAGCTCAGTGGCAGAGTGCGTGCTCAGTATGCATaGCGCCCTGGTCTCATCTCCGGCACCAGAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EQLSGRVRAQYA*RPGLISGTRRK Trigger: TTTTCTTCTGGTGCCGGAGATGAGACCAGGGCGTCATGCATACTGAGCACGCACTCTGCCACTGAGCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR GCA 72 bp | GAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTaGAGTGGCTGCAGGGCCTGCAGGAAGACAGCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EHPCRNGKAVKL*SGCRACRKTAF Trigger: AAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AGAGCACCAGGCCCTCCTAGCTGTAGTAAGGAATGGTaGTTTCAGAGGCCTGGGCGTCTTGGGAGGAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RAPGPPSCSKEW*FQRPGRLGRRL Trigger: TAACCTCCTCCCAAGACGCCCAGGCCTCTGAAACCACCATTCCTTACTACAGCTAGGAGGGCCTGGTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | GCTCTCTGGCTCTGCAGGCCGCGAGAAGGAAGTGAGTaGACTCGAATCTTCAGTAAATCACACAGGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ALWLCRPREGSE*TRIFSKSHRLH Trigger: GTGGAGCCTGTGTGATTTACTGAAGATTCGAGTCCACTCACTTCCTTCTCGCGGCCTGCAGAGCCAGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CATGCTGCAGGGACAGAGGGGCTGTCCGTTTCGCACTaGTCTCCTAGATGTGTGGATGGGAGAAATGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HAAGTEGLSVSH*SPRCVDGRNEH Trigger: ATGCTCATTTCTCCCATCCACACATCTAGGAGATCAGTGCGAAACGGACAGCCCCTCTGTCCCTGCAGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR GCA 72 bp | TGTAGAAATGGCAAGGCCGTCAAGCTTTGCAGTGGCTaGAGGGCCTGCAGGAAGACAGCGTTTCTAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CRNGKAVKLCSG*RACRKTAFLDR Trigger: TCTGTCTAGAAACGCTGTCTTCCTGCAGGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | TGGGGTTTCACAAAGCAGCTCCCAGTTCTCCTAACCTaGCTTTCTCAGCTCCCTCCCTTGACTACAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WGFTKQLPVLLT*LSQLPPLTTAP Trigger: AGGAGCTGTAGTCAAGGGAGGGAGCTGAGAAAGCCAGGTTAGGAGAACTGGGAGCTGCTTTGTGAAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CCAGGAGCAGGACACACCCTCAGCACGTCACAGATATaGCAGACAGCCGAGCTTCGACTGCTTTACACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGAGHTLSTSQI*QTAELRLLYTK Trigger: TTTTGTGTAAAGCAGTCGAAGCTCGGCTGTCTGTCATATCTGTGACGTGCTGAGGGTGTGTCCTGCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | TGGTGTTTTTGGAGAATGGGAAGTCACTGTTTAGGGTaGGGCAGCTCCAATCCAGGAGCAGGACACACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WCFWRMGSHCLG*GSSNPGAGHTL Trigger: GAGGGTGTGTCCTGCTCCTGGATTGGAGCTGCCTCACCCTAAACAGTGACTTCCCATTCTCCAAAAACACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR GCA 72 bp | CGATATAAAGGACTGGAGATAGAGTTTGGCACACAGTaGCTGCCTAGCATGAACCCAGTCCTGGGCTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RYKGLEIEFGTQ*LPSMNPVLGLT Trigger: GGTCAAGCCCAGGACTGGGTTCATGCTAGGCAGGCACTGTGTGCCAAACTCTATCTCCAGTCCTTTATATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR GCA 72 bp | AATTGGGTGACGTTTACCAAGAATGTCATCAGCCACTaGTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NWVTFTKNVISH*SWWKNQNSRPR Trigger: TCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AACTGCTTTTCAGACTTCCAAGAGCACGATTCTCTGTaGCAAGATGCACAGCAGGACAGACTCAGCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NCFSDFQEHDSL*QDAQQDRLSLE Trigger: CTCCAGGCTGAGTCTGTCCTGCTGTGCATCTTGCCACAGAGAATCGTGCTCTTGGAAGTCTGAAAAGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | GTGACGTTTACCAAGAATGTCATCAGCCACTGCTCCTaGTGGAAGAACCAGAATTCCCGCCCCAGAACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VTFTKNVISHCS*WKNQNSRPRTN Trigger: ATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AAGGATGGACATGGGCAGAAGCCGAGGTGCAAAGGCTaGGACCAGTATACATTTGACATGCAGATTGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KDGHGQKPRCKG*DQYTFDMQIAD Trigger: ATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCCTTTGCACCTCGGCTTCTGCCCATGTCCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | GCGTTTCTAGACAGATTTACTATACAAGGATGGACATaGGCAGAAGCCGAGGTGCAAAGGCTGGGACCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AFLDRFTIQGWT*AEAEVQRLGPV Trigger: TACTGGTCCCAGCCTTTGCACCTCGGCTTCTGCCCATGTCCATCCTTGTATAGTAAATCTGTCTAGAAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGGAGTGACAGCCATAGAACCCTCAACCATCTAACAATCCTCCAGCTTGTAGGCACAGTGGTGAAATaGGTGACTAGTGAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GWSDSHRTLNHLTILQLVGTVVK*VTSEVL Trigger: CAGAACCTCACTAGTCACCAATTTCACCACTGTGCC...TACAAGCTGGAGGATTGTTAGATGGTTGAGGGTTCTATGGCTGTCACTCCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CGAAATAAGCCAAGTACAGATGTGCGGATAGGCAGCTaGCTGACCATATCGTCCAGTGCTTCTCTCATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RNKPSTDVRIGS*LTISSSASLIV Trigger: CACTATGAGAGAAGCACTGGACGATATGGTCAGTCAGCTGCCTATCCGCACATCTGTACTTGGCTTATTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR TCA 72 bp | ATACAATCCAGGATGTGCCTCACAGCAATCAAAGTGTaGCTGCTGGGAGAGCACCCTTGTAGAAATGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQSRMCLTAIKV*LLGEHPCRNGK Trigger: CTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTTTGATTGCTGTGAGGCACATCCTGGATTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR GCA 72 bp | TTACTATACAAGGATGGACATGGGCAGAAGCCGAGGTaGAAAGGCTGGGACCAGTATACATTTGACATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLYKDGHGQKPR*KGWDQYTFDMQ Trigger: CTGCATGTCAAATGTATACTGGTCCCAGCCTTTGCACCTCGGCTTCTGCCCATGTCCATCCTTGTATAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | CAAGGTCAGGGGGTAGCTTACCGGCTCTCATATGTATaGAAGTACTCTCCAAACCTCAGAGTTTTAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QGQGVAYRLSYV*KYSPNLRVLGS Trigger: ACTGCCTAAAACTCTGAGGTTTGGAGAGTACTTCCATACATATGAGAGCCGGTAAGCTACCCCCTGACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | CTTAAAATCTCAGTTCAAGACAAGTTACCAGGAATGTaGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LKISVQDKLPGM*VLSPGRQGQGV Trigger: TACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGTAACTTGTCTTGAACTGAGATTTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | ACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTaGAAGAACCAGAATTCCCGCCCCAGAACTAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TFTKNVISHCSW*KNQNSRPRTNV Trigger: AACATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AAGACAGCGTTTCTAGACAGATTTACTATACAAGGATaGACATGGGCAGAAGCCGAGGTGCAAAGGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KTAFLDRFTIQG*TWAEAEVQRLG Trigger: TCCCAGCCTTTGCACCTCGGCTTCTGCCCATGTCCATCCTTGTATAGTAAATCTGTCTAGAAACGCTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCCACGGTGGAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGTCATCTGAGTTCAGCTaGGCTTACACAAGAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DSTVEIDRSWHLASPHYESSEFS*AYTRTF Trigger: AAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATGA...CTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CCCTCCCTTGACTACAGCTCCTTGAGACATAAGCTATaGAAGGAACACTACGCAGAAAGTTGTGGCAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLDYSSLRHKL*KEHYAESCGKN Trigger: GTTCTTGCCACAACTTTCTGCGTAGTGTTCCTTTCATAGCTTATGTCTCAAGGAGCTGTAGTCAAGGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | TGGCTTTCTCAGCTCCCTCCCTTGACTACAGCTCCTTaGGACATAAGCTATGAAAGGAACACTACGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WLSQLPPLTTAP*DISYERNTTQK Trigger: TTTCTGCGTAGTGTTCCTTTCATAGCTTATGTCTCAAGGAGCTGTAGTCAAGGGAGGGAGCTGAGAAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR GCA 72 bp | CGAGGTGCAAAGGCTGGGACCAGTATACATTTGACATaGAGATTGCAGATTCTGATTACCAGAGTCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGAKAGTSIHLT*RLQILITRVKS Trigger: GCTCTTGACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCCTTTGCACCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTCACACTACGCAGAAAGTaGTGGCAAGAACCAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AGTSIHLTCRLQILITRVTLRRK*WQEPER Trigger: TCTCTCTGGTTCTTGCCACAACTTTCTGCGTAGTGT...GACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTACACTACGCAGAAAGTaGTGGCAAGAACCAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GWDQYTFDMQIADSDYQSTLRRK*WQEPER Trigger: TCTCTCTGGTTCTTGCCACAACTTTCTGCGTAGTGT...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | AGATGTGTGGATGGGAGAAATGAGCATGCTAAACTCTaGAAGCAGACAGCTGTGTTATACCAGGCAACGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RCVDGRNEHAKL*KQTAVLYQATN Trigger: GTTCGTTGCCTGGTATAACACAGCTGTCTGCTTTCAGAGTTTAGCATGCTCATTTCTCCCATCCACACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| 3UTR CCA 72 bp | CCTGTATTTGACTCCACGGTGGAAATAGACAGGAGCTaGCATTTGGCTTCCCCACATTATGAGACTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PVFDSTVEIDRS*HLASPHYETLY Trigger: ATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTCAAATACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | CAGCAACAAGACGACTACCCTGAATTCTCCAAATTTTaGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QQQDDYPEFSKF*SEAVKPIGSQR Trigger: TCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTTGGAGAATTCAGGGTAGTCGTCTTGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CTTGGGAGTTCCAGGACAATCTATGTACAGCTCATCTaGGTTCAGCTTGGCTTACACAAGAACCTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGSSRTIYVQLI*VQLGLHKNLSS Trigger: ACTAGAAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAACTCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | GTGAAACCCATTGGGTCACAGAGAAATGCAAAACCATaGACAGACAGCCAGGGTAATTACAAAGCTGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VKPIGSQRNAKP*TDSQGNYKAAL Trigger: TAGAGCAGCTTTGTAATTACCCTGGCTGTCTGTTCATGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AAACACCCAGGCTTCCTGGTCTTTAATGTCACACCATaGACACCAACATCCCACTGGTTTGTTACCATATTA | + |
|
Preference number: 3 (lower is better) Translates to: KHPGFLVFNVTP*TPTSHWFVTIL Trigger: TAATATGGTAACAAACCAGTGGGATGTTGGTGTCCATGGTGTGACATTAAAGACCAGGAAGCCTGGGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTTCATCTGAGTTCAGCTaGGCTTACACAAGAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GWDQYTFDMQIADSDYQSSSEFS*AYTRTF Trigger: AAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATGA...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | CATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTaGCGTTTACCAAGAATGTCATCAGCCACTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLLKTKGTPLIG*RLPRMSSATAP Trigger: AGGAGCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTGGCACAGTGGTGAAATaGGTGACTAGTGAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YRITSLKNKGYSTNWVTFGTVVK*VTSEVL Trigger: CAGAACCTCACTAGTCACCAATTTCACCACTGTGCC...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | ATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTaGGTGACGTTTACCAAGAATGTCATCAGCCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: ITSLKNKGYSTN*VTFTKNVISHC Trigger: GCAGTGGCTGATGACATTCTTGGTAAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CCA 72 bp | AACAACGTTCCTTACAGAAGGGTAGATCTGACACTGTaGAAGCATTATACAAAATTACGATATAAAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: NNVPYRRVDLTL*KHYTKLRYKGL Trigger: CAGTCCTTTATATCGTAATTTTGTATAATGCTTCCACAGTGTCAGATCTACCCTTCTGTAAGGAACGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR TCA 72 bp | GAGATAAGGGGATTGGTATTGAGTAATTTGAAGGAGTaGCTATTCAACTGTGCTTCATTAATTCCATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: EIRGLVLSNLKE*LFNCASLIPFV Trigger: CACAAATGGAATTAATGAAGCACAGTTGAATAGTCACTCCTTCAAATTACTCAATACCAATCCCCTTATCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGTCAGCTTCTCCGGGCTaGTGCGGAGGGTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRNVGSKPWQARSGGSLPSASPG*CGGCRF Trigger: AAACCTGCACCCTCCGCATCAGCCCGGAGAAGCTGA...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTCTCTGGTCTCAGTCTCCACCTCAGGATGGGGTTTCACAAAGCAGCTCCTCAGCTTCTCCGGGCTaGTGCGGAGGGTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLWSQSPPQDGVSQSSSSASPG*CGGCRF Trigger: AAACCTGCACCCTCCGCATCAGCCCGGAGAAGCTGA...GGAGCTGCTTTGTGAAACCCCATCCTGAGGTGGAGACTGAGACCAGAGACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTTTGGTGGGAGTCACTTaGTGTCCGGCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPLVGVT*CPARNW Trigger: CCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAA...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGACTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTTGCTCACGCCTCCACTaGCCAGCTTGTCGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KCDCWESTLVEMARPSSFCSRLH*PACRTG Trigger: TCCTGTGCGACAAGCTGGCCAGTGGAGGCGTGAGCA...AAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGATGCACACTGCCTTGGTaGGAGTCACTTGCTGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNVISHCSWWKNQNSRPRCTLPW*ESLAVR Trigger: CCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCA...TCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGCTCTCATATGTATGGAAGCTGGGATGAAATACTaGAGGGAGACGTCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWQARSGGSLPALICMEAGMKY*RETSSR Trigger: CCTGGAAGACGTCTCCCTTCAGTATTTCATCCCAGC...TTCCATACATATGAGAGCCGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGCTCTCATATGTATGGAATTGGTGGGAGTCACTTaGTGTCCGGCAAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWQARSGGSLPALICMELVGVT*CPARNW Trigger: CCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAA...TTCCATACATATGAGAGCCGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGGCTCTTGGCCATGTCTTCTaGGTGTCTGTTTTGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNVGSKPWQARSGGSLPALGHVF*VSVLRD Trigger: GTCTCTCAAAACAGACACCCAGAAGACATGGCCAAG...AGCCGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGTTTATGGGGATATCATaGACCACGATTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRNVGSKPWQARSGGSLPFMGIS*TTILLL Trigger: CAGCAGCAGAATCGTGGTGCATGATATCCCCATAAA...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | AAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGAAGGACAAGGCTGGGATaGAATACTGAAGGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVISHCSWWKNQNSRPRRTRLG*NTEGRR Trigger: ACGTCTCCCTTCAGTATTTCATCCCAGCCTTGTCCT...TCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCCGCCCCAGATATTGCACACTGCCTTaGTGGGAGTCACTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNVISHCSWWKNQNSRPRYCTLP*WESLAV Trigger: GACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATA...TCTGGGGCGGGAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTCTCTGGTCTCAGTCTCCACCTCAGGATGGGGTTTCACAAAGCAGCTCCAGGACAAGGCTGGGATaGAATACTGAAGGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KCLWSQSPPQDGVSQSSSRTRLG*NTEGRR Trigger: ACGTCTCCCTTCAGTATTTCATCCCAGCCTTGTCCT...GGAGCTGCTTTGTGAAACCCCATCCTGAGGTGGAGACTGAGACCAGAGACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTTGTATAGGAGTCCAGCTCACACCACATaGTCACGCCTCCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDRSWHLASPHYETLYRSPAHTT*SRLHWP Trigger: TGGCCAGTGGAGGCGTGAGCATGTGGTGTGAGCTGG...ACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCACGGTGGAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGGGAGGGTGCAGGTTTTaGCAAGCTTGGCTATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DSTVEIDRSWHLASPHYEGGCRF*QAWLSC Trigger: ACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCC...CTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGACTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTTGTCAATGTGCACCTTaGCCATGTCTTCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCDCWESTLVEMARPSSFCQCAP*PCLLGV Trigger: GACACCCAGAAGACATGGCCAAGGTGCACATTGACA...AAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | GACTCTCCATCAGAATCCACACAAAAGCACAGAACTGGAGTGTGTCACCACATATGCACACTGCCTTGGTaGGAGTCACTTGCTGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSPSESTQKHRTGVCHHICTLPW*ESLAVR Trigger: CCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCA...TATGTGGTGACACACTCCAGTTCTGTGCTTTTGTGTGGATTCTGATGGAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGAACCTCTGCTGCTGCTCGATaGAGACACCTGCAGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSMYSSSEFSLAYTRTSAAAR*RHLQLY Trigger: GTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGA...GGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGATCTGCTGCTGCTCGATaGAGACACCTGCAGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGQSMYSSSEFSLAYTRSAAAR*RHLQLY Trigger: GTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGA...TCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCACCAGCTCACACCACATaGTCACGCCTCCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPPAHTT*SRLHWP Trigger: TGGCCAGTGGAGGCGTGAGCATGTGGTGTGAGCTGG...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCACTGTTTAGGGTGAGGCAGCTCCAATCCAGGAGCAGGACACACCCTCAGTTCTTTATGTCAATGTaGACCTTGGCCATGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLFRVRQLQSRSRTHPQFFMSM*TLAMSS Trigger: AGAAGACATGGCCAAGGTGCACATTGACATAAAGAA...CTGAGGGTGTGTCCTGCTCCTGGATTGGAGCTGCCTCACCCTAAACAGTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCTATTGCACACTGCCTTaGTGGGAGTCACTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVYQECHQPLLLVEEPEFYCTLP*WESLAV Trigger: GACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATA...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | ATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTTGTATAGGAGTGCTGGGATGAAATACTaGAGGGAGACGTCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDRSWHLASPHYETLYRSAGMKY*RETSSR Trigger: CCTGGAAGACGTCTCCCTTCAGTATTTCATCCCAGC...ACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAAGCATAAGTATTAAGTCAAAGGAAGCAGTTTCAAGCTTTCCCACGGATTGCTCACGCCTCCACTaGCCAGCTTGTCGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSISIKSKEAVSSFPTDCSRLH*PACRTG Trigger: TCCTGTGCGACAAGCTGGCCAGTGGAGGCGTGAGCA...ATCCGTGGGAAAGCTTGAAACTGCTTCCTTTGACTTAATACTTATGCTTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTGACCATATCGTCCAGTGCTTCTCTCATAGTGACAAAGGTCTCTGTGCTTTTATGGGGATATCATaGACCACGATTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTDHIVQCFSHSDKGLCAFMGIS*TTILLL Trigger: CAGCAGCAGAATCGTGGTGCATGATATCCCCATAAA...AGCACAGAGACCTTTGTCACTATGAGAGAAGCACTGGACGATATGGTCAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020683.10 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGACAACACACAGTAAAATGTCTCTGGTCTCAGTCTCCACCTCAGGATCTTGGCCATGTCTTCTaGGTGTCTGTTTTGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCRQHTVKCLWSQSPPQDLGHVF*VSVLRD Trigger: GTCTCTCAAAACAGACACCCAGAAGACATGGCCAAG...ATCCTGAGGTGGAGACTGAGACCAGAGACATTTTACTGTGTGTTGTCTGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTTGTCAATGTGCACCTTaGCCATGTCTTCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWDQYTFDMQIADSDYQSCQCAP*PCLLGV Trigger: GACACCCAGAAGACATGGCCAAGGTGCACATTGACA...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | GGTGGAAGAACCAGAATTCCCGCCCCAGAACTAATGTaGAACTGCTTTTCAGACTTCCAAGAGCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRTRIPAPELM*NCFSDFQEHDS Trigger: AGAATCGTGCTCTTGGAAGTCTGAAAAGCAGTTCAACATTAGTTCTGGGGCGGGAATTCTGGTTCTTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | GCAAAGGCTGGGACCAGTATACATTTGACATGCAGATaGCAGATTCTGATTACCAGAGTCAAGAGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKAGTSIHLTCR*QILITRVKSTR Trigger: CCTGGTGCTCTTGACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | AGAAGCCGAGGTGCAAAGGCTGGGACCAGTATACATTaGACATGCAGATTGCAGATTCTGATTACCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSRGAKAGTSIH*TCRLQILITRV Trigger: GACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCCTTTGCACCTCGGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCTGTTATTCACAATATTaGACACTGCCTTGGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVYQECHQPLLLVEEPEFCYSQY*TLPWWE Trigger: CTCCCACCAAGGCAGTGTGCAATATTGTGAATAACA...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | AGGAGCTGGCATTTGGCTTCCCCACATTATGAGACTTaGTATAGGAGTCTGTTCTGGTCTGTTCACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSWHLASPHYET*YRSLFWSVHMR Trigger: TCTCATGTGAACAGACCAGAACAGACTCCTATACAAAGTCTCATAATGTGGGGAAGCCAAATGCCAGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | CCACGGATAGTAAATAGCCAAGTGACCTTCAGGACATaGGTACTAACACCCCTCCTACCATCAATGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRIVNSQVTFRT*VLTPLLPSMSK Trigger: TTTGGACATTGATGGTAGGAGGGGTGTTAGTACCAATGTCCTGAAGGTCACTTGGCTATTTACTATCCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGAACCTGTCCGGCAAGAAACTaGAGGAGTTTCTTTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQSMYSSSEFSLAYTRTCPARN*RSFFMS Trigger: TGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACA...GGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGATGTTATTCACAATATTaGACACTGCCTTGGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGQSMYSSSEFSLAYTRCYSQY*TLPWWE Trigger: CTCCCACCAAGGCAGTGTGCAATATTGTGAATAACA...TCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | CAACGTTCCTTACAGAAGGGTAGATCTGACACTGTGGAAGCATTATACAAAATTGGAGGGTGCAGGTTTTaGCAAGCTTGGCTATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSLQKGRSDTVEALYKIGGCRF*QAWLSC Trigger: ACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCC...AATTTTGTATAATGCTTCCACAGTGTCAGATCTACCCTTCTGTAAGGAACGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTTGGCTTACACAAGAGCTTCAATCACAAGCTaGTTGCTGATGTTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VPGQSMYSSSEFSLAYTRASITS*LLMFLI Trigger: AATGAGAAACATCAGCAATCAGCTTGTGATTGAAGC...TCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTAAGGCTCTGGAGTTCTaGGCAGTTTTCAAGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YRITSLKNKGYSTNWVTFKALEF*AVFKAR Trigger: TCGAGCCTTGAAAACTGCCCAGAACTCCAGAGCCTT...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CCA 90 bp | ACATCCCACTGGTTTGTTACCATATTAGCAGCACTTTATTGTATTGCATTAGGGTGTCCGGCAAGAAACTaGAGGAGTTTCTTTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSHWFVTILAALYCIALGCPARN*RSFFMS Trigger: TGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACA...CCCTAATGCAATACAATAAAGTGCTGCTAATATGGTAACAAACCAGTGGGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| 3UTR CAA 72 bp | CCAGGACAATCTATGTACAGCTCATCTGAGTTCAGCTaGGCTTACACAAGAACCTTTCTAGTAAAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGQSMYSSSEFS*AYTRTFLVKME Trigger: TTCCATTTTTACTAGAAAGGTTCTTGTGTAAGCCAAGCTGAACTCAGATGAGCTGTACATAGATTGTCCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCATCAAGATCCTTAAAATaGGTAGTCACACACACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPSRSLK*VVTHTN Trigger: GTTAGTGTGTGTGACTACTCATTTTAAGGATCTTGA...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR TCA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTTCAAGATCCTTAAAATaGGTAGTCACACACACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YRITSLKNKGYSTNWVTFSRSLK*VVTHTN Trigger: GTTAGTGTGTGTGACTACTCATTTTAAGGATCTTGA...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATG | + |
|
Preference number: 5 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPRRVQV*ASLAIM Trigger: CATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCG...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCACTGTTTAGGGTGAGGCAGCTCCAATCCAGGAGCAGGACACACCCTCAGCCTCCACTGGCCAGCTaGTCGCACAGGATGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFRVRQLQSRSRTHPQPPLAS*SHRMKF Trigger: GAACTTCATCCTGTGCGACAAGCTGGCCAGTGGAGG...CTGAGGGTGTGTCCTGCTCCTGGATTGGAGCTGCCTCACCCTAAACAGTGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGATGTCAATGTGCACCTaGGCCATGTCTTCTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TRNVGSKPWQARSGGSLPMSMCT*AMSSGC Trigger: ACACCCAGAAGACATGGCCAAGGTGCACATTGACAT...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCAGGACAGACTCAGCCTGGAGACCTGATGATGGGTAGGAAGGTGCCTATGTCAATGTGCACCTaGGCCATGTCTTCTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTAGQTQPGDLMMGRKVPMSMCT*AMSSGC Trigger: ACACCCAGAAGACATGGCCAAGGTGCACATTGACAT...AGGCACCTTCCTACCCATCATCAGGTCTCCAGGCTGAGTCTGTCCTGCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTGCAGTGGCTGCAGGGCCCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EHPCRNGKAVKLCSGCRAQVLAS*AIMLLT Trigger: AGTCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...GGCCCTGCAGCCACTGCAAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGAATGTGGGTTCTAAGCCCTGGCAGGCAAGGTCAGGGGGTAGCTTACCGCTGTTATTCACAATATaGCACACTGCCTTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRNVGSKPWQARSGGSLPLLFTI*HTALVG Trigger: TCCCACCAAGGCAGTGTGCAATATTGTGAATAACAG...CGGTAAGCTACCCCCTGACCTTGCCTGCCAGGGCTTAGAACCCACATTCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCCTTGGTGGGAGTCACTaGCTGTCCGGCAAGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: DVYQECHQPLLLVEEPEFLGGSH*LSGKKL Trigger: CAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAG...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS TCA 90 bp | AACCTTTATGGGGATATCATGCACCACGATTCTGCTGCTGCTCGATaGAGACACCTGCAGCTCTACAGACACGGTAAGACAGGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLYGDIMHHDSAAAR*RHLQLYRHGKTGKV Trigger: CACTTTCCCTGTCTTACCGTGTCTGTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGAATCGTGGTGCATGATATCCCCATAAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS CCA 90 bp | TTGCACACTGCCTTGGTGGGAGTCACTTGCTGTCCGGCAAGAAACTaGAGGAGTTTCTTTATGTCAATGTGCACCTTGGCCATGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTALVGVTCCPARN*RSFFMSMCTLAMSS Trigger: AGAAGACATGGCCAAGGTGCACATTGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GACTCTCCATCAGAATCCACACAAAAGCACAGAACTGGAGTGTGTCACCACATACTTGGTGGGAGTCACTaGCTGTCCGGCAAGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: DSPSESTQKHRTGVCHHILGGSH*LSGKKL Trigger: CAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAG...TATGTGGTGACACACTCCAGTTCTGTGCTTTTGTGTGGATTCTGATGGAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GACTCCACGGTGGAAATAGACAGGAGCTGGCATTTGGCTTCCCCACATTATGAGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DSTVEIDRSWHLASPHYEQVLAS*AIMLLT Trigger: AGTCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...CTCATAATGTGGGGAAGCCAAATGCCAGCTCCTGTCTATTTCCACCGTGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GACGTTTACCAAGAATGTCATCAGCCACTGCTCCTGGTGGAAGAACCAGAATTCATATTGCACACTGCCTaGGTGGGAGTCACTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DVYQECHQPLLLVEEPEFILHTA*VGVTCC Trigger: ACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATAT...GAATTCTGGTTCTTCCACCAGGAGCAGTGGCTGATGACATTCTTGGTAAACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTGACTGCTGGGAGAGCACCCTTGTAGAAATGGCAAGGCCGTCAAGCTTTATTCTCCCTTTAGGTTaGCTTCAATCACAAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KCDCWESTLVEMARPSSFILPLG*LQSQAD Trigger: ATCAGCTTGTGATTGAAGCAAACCTAAAGGGAGAAT...AAAGCTTGACGGCCTTGCCATTTCTACAAGGGTGCTCTCCCAGCAGTCACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGACCAGTATACATTTGACATGCAGATTGCAGATTCTGATTACCAGAGTATATTGCACACTGCCTaGGTGGGAGTCACTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWDQYTFDMQIADSDYQSILHTA*VGVTCC Trigger: ACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATAT...ACTCTGGTAATCAGAATCTGCAATCTGCATGTCAAATGTATACTGGTCCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS TCA 90 bp | TTTCCACAACACTCTTCATCATCTTCAAGGCTGGTAAGCAAATACTaGCGTCACAGTCTGGGATGGAGGGTTCTTGTAAGTCCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FPQHSSSSSRLVSKY*RHSLGWRVLVSPST Trigger: TGTGGAAGGACTTACAAGAACCCTCCATCCCAGACTGTGACGTCAGTATTTGCTTACCAGCCTTGAAGATGATGAAGAGTGTTGTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
||
| CDS GCA 90 bp | GTTCTGTTATTCACAATATTGCACACTGCCTTGGTGGGAGTCACTTaGTGTCCGGCAAGAAACTGGAGGAGTTTCTTTATGTCAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLFTILHTALVGVT*CPARNWRSFFMSMC Trigger: GCACATTGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATATTGTGAATAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS-3UTR CAA 90 bp | AACTGCAGACAACACACAGTAAAATGTCTCTGGTCTCAGTCTCCACCTCAGGATCTGTTATTCACAATATaGCACACTGCCTTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: NCRQHTVKCLWSQSPPQDLLFTI*HTALVG Trigger: TCCCACCAAGGCAGTGTGCAATATTGTGAATAACAG...ATCCTGAGGTGGAGACTGAGACCAGAGACATTTTACTGTGTGTTGTCTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS-3UTR CAA 90 bp | TACAGAATTACATCTCTTAAAAACAAAGGGTACTCCACTAATTGGGTGACGTTTCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATG | + |
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Preference number: 5 (lower is better) Translates to: YRITSLKNKGYSTNWVTFRRVQV*ASLAIM Trigger: CATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCG...AAACGTCACCCAATTAGTGGAGTACCCTTTGTTTTTAAGAGATGTAATTCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS-3UTR CAA 90 bp | AACTGCAGACAACACACAGTAAAATGTCTCTGGTCTCAGTCTCCACCTCAGGATAGACAGGGAAAGTGTTaGTTAGTCAGCTTGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: NCRQHTVKCLWSQSPPQDRQGKC*LVSLIF Trigger: GAAAATCAAGCTGACTAACAAACACTTTCCCTGTCT...ATCCTGAGGTGGAGACTGAGACCAGAGACATTTTACTGTGTGTTGTCTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS-3UTR CAA 90 bp | AAATTTTGGAGTGAAGCTGTGAAACCCATTGGGTCACAGAGAAATGCAAAACCAAGACAGGGAAAGTGTTaGTTAGTCAGCTTGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: KFWSEAVKPIGSQRNAKPRQGKC*LVSLIF Trigger: GAAAATCAAGCTGACTAACAAACACTTTCCCTGTCT...TGGTTTTGCATTTCTCTGTGACCCAATGGGTTTCACAGCTTCACTCCAAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS-3UTR CAA 90 bp | TTTACACAAAACAACGTTCCTTACAGAAGGGTAGATCTGACACTGTGGAAGCATATTCTCCCTTTAGGTTaGCTTCAATCACAAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FTQNNVPYRRVDLTLWKHILPLG*LQSQAD Trigger: ATCAGCTTGTGATTGAAGCAAACCTAAAGGGAGAAT...ATGCTTCCACAGTGTCAGATCTACCCTTCTGTAAGGAACGTTGTTTTGTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS TCA 90 bp | GAGACACTGTCAGAGGGTAATAGAGGGTTTTCAAGATCCTTAAAATaGGTAGTCACACACACTAACTCAGTTTCTATCTTTAGGTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: ETLSEGNRGFSRSLK*VVTHTNSVSIFRFN Trigger: ATTAAACCTAAAGATAGAAACTGAGTTAGTGTGTGTGACTACTCATTTTAAGGATCTTGAAAACCCTCTATTACCCTCTGACAGTGTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 72 bp | AGCTCACACCACATGCTCACGCCTCCACTGGCCAGCTaGTCGCACAGGATGAAGTTCAGCTTCTCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSHHMLTPPLAS*SHRMKFSFSGL Trigger: CAGCCCGGAGAAGCTGAACTTCATCCTGTGCGACAAGCTGGCCAGTGGAGGCGTGAGCATGTGGTGTGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 72 bp | TTCAGCTTCTCCGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGACTCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FSFSGLMRRVQV*ASLAIMLLTRV Trigger: CACACGAGTCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCGGAGAAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS TCA 72 bp | GGGGATATCATGCACCACGATTCTGCTGCTGCTCGATaGAGACACCTGCAGCTCTACAGACACGGTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: GDIMHHDSAAAR*RHLQLYRHGKT Trigger: TGTCTTACCGTGTCTGTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGAATCGTGGTGCATGATATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS GCA 72 bp | TGCACCACGATTCTGCTGCTGCTCGATGAAGACACCTaGAGCTCTACAGACACGGTAAGACAGGGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CTTILLLLDEDT*SSTDTVRQGKC Trigger: ACACTTTCCCTGTCTTACCGTGTCTGTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGAATCGTGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS GCA 72 bp | CCTTTATGGGGATATCATGCACCACGATTCTGCTGCTaGTCGATGAAGACACCTGCAGCTCTACAGACACGG | + |
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Preference number: 6 (lower is better) Translates to: PLWGYHAPRFCC*SMKTPAALQTR Trigger: CCGTGTCTGTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGAATCGTGGTGCATGATATCCCCATAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CCA 72 bp | GCCTTGGTGGGAGTCACTTGCTGTCCGGCAAGAAACTaGAGGAGTTTCTTTATGTCAATGTGCACCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALVGVTCCPARN*RSFFMSMCTLA Trigger: GGCCAAGGTGCACATTGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS GCA 72 bp | GAACCTTTATGGGGATATCATGCACCACGATTCTGCTaGTGCTCGATGAAGACACCTGCAGCTCTACAGACA | + |
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Preference number: 6 (lower is better) Translates to: EPLWGYHAPRFC*CSMKTPAALQT Trigger: TGTCTGTAGAGCTGCAGGTGTCTTCATCGAGCAGCAGCAGAATCGTGGTGCATGATATCCCCATAAAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 90 bp | GAAGACACCTGCAGCTCTACAGACACGGTAAGACAGGGAAAGTGTTaGTTAGTCAGCTTGATTTTCAAGGCTCTGGAGTTCTGGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EDTCSSTDTVRQGKC*LVSLIFKALEFWAV Trigger: AACTGCCCAGAACTCCAGAGCCTTGAAAATCAAGCTGACTAACAAACACTTTCCCTGTCTTACCGTGTCTGTAGAGCTGCAGGTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 90 bp | AGCTCTACAGACACGGTAAGACAGGGAAAGTGTTTGTTAGTCAGCTaGATTTTCAAGGCTCTGGAGTTCTGGGCAGTTTTCAAGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SSTDTVRQGKCLLVS*IFKALEFWAVFKAR Trigger: TCGAGCCTTGAAAACTGCCCAGAACTCCAGAGCCTTGAAAATCAAGCTGACTAACAAACACTTTCCCTGTCTTACCGTGTCTGTAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS TCA 72 bp | ATGTGCACCTTGGCCATGTCTTCTGGGTGTCTGTTTTaGGAGACACTGTCAGAGGGTAATAGAGGGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: MCTLAMSSGCLF*ETLSEGNRGFS Trigger: TGAAAACCCTCTATTACCCTCTGACAGTGTCTCTCAAAACAGACACCCAGAAGACATGGCCAAGGTGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS GCA 72 bp | TTCACAATATTGCACACTGCCTTGGTGGGAGTCACTTaGTGTCCGGCAAGAAACTGGAGGAGTTTCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: FTILHTALVGVT*CPARNWRSFFM Trigger: CATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATATTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CCA 72 bp | GAACAGTTCTGTTATTCACAATATTGCACACTGCCTTaGTGGGAGTCACTTGCTGTCCGGCAAGAAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: EQFCYSQYCTLP*WESLAVRQETG Trigger: TCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATATTGTGAATAACAGAACTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS TCA 72 bp | CACTCTTCATCATCTTCAAGGCTGGTAAGCAAATACTaGCGTCACAGTCTGGGATGGAGGGTTCTTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: HSSSSSRLVSKY*RHSLGWRVLVS Trigger: ACTTACAAGAACCCTCCATCCCAGACTGTGACGTCAGTATTTGCTTACCAGCCTTGAAGATGATGAAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 72 bp | GACACGGTAAGACAGGGAAAGTGTTTGTTAGTCAGCTaGATTTTCAAGGCTCTGGAGTTCTGGGCAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DTVRQGKCLLVS*IFKALEFWAVF Trigger: GAAAACTGCCCAGAACTCCAGAGCCTTGAAAATCAAGCTGACTAACAAACACTTTCCCTGTCTTACCGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 72 bp | TGCAGCTCTACAGACACGGTAAGACAGGGAAAGTGTTaGTTAGTCAGCTTGATTTTCAAGGCTCTGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CSSTDTVRQGKC*LVSLIFKALEF Trigger: GAACTCCAGAGCCTTGAAAATCAAGCTGACTAACAAACACTTTCCCTGTCTTACCGTGTCTGTAGAGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 72 bp | ATTCACAATATTGCACACTGCCTTGGTGGGAGTCACTaGCTGTCCGGCAAGAAACTGGAGGAGTTTCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: IHNIAHCLGGSH*LSGKKLEEFLY Trigger: ATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATATTGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS CAA 90 bp | AGTTCTGTTATTCACAATATTGCACACTGCCTTGGTGGGAGTCACTaGCTGTCCGGCAAGAAACTGGAGGAGTTTCTTTATGTCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: SSVIHNIAHCLGGSH*LSGKKLEEFLYVNV Trigger: CACATTGACATAAAGAAACTCCTCCAGTTTCTTGCCGGACAGCAAGTGACTCCCACCAAGGCAGTGTGCAATATTGTGAATAACAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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| CDS TCA 72 bp | TCAGAGGGTAATAGAGGGTTTTCAAGATCCTTAAAATaGGTAGTCACACACACTAACTCAGTTTCTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SEGNRGFSRSLK*VVTHTNSVSIF Trigger: AAAGATAGAAACTGAGTTAGTGTGTGTGACTACTCATTTTAAGGATCTTGAAAACCCTCTATTACCCTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020683.10 ENSMUST00000129115.2 |
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