Pregenerated sensors for HTRA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037406Ensembl transcript IDs: ENSMUST00000084031.6
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCAAGATGTCTTATAGGTGATGACCTTTCTATCCACAAACCCTaGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: APRCLIGDDLSIHKP*PRVDITWEIQYTKG Trigger: CCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGGTTTGTGGATAGAAAGGTCATCACCTATAAGACATCTTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR TCA 90 bp | CTTACTGTCATCAAGTTTTATCAGATCACCATAGCTGTTTCCATTTaGGTTAGGAAGGTTTTTGCGGCAGAAGAGCACTCTCAACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LTVIKFYQITIAVSI*VRKVFAAEEHSQPQ Trigger: CTGAGGTTGAGAGTGCTCTTCTGCCGCAAAAACCTTCCTAACTCAAATGGAAACAGCTATGGTGATCTGATAAAACTTGATGACAGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR GCA 90 bp | CTTCTGCATTTAAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTaGCATCTCTGGCACCTCTTCGATACAAAACCAGGTAATATAACT | + |
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Preference number: 1 (lower is better) Translates to: LLHLKHPFFLISRRP*HLWHLFDTKPGNIT Trigger: AGTTATATTACCTGGTTTTGTATCGAAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTTAAATGCAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTAGCATCCATTTTTCTTaGTCTCCAGAAGACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VSTSKMITLLCGSMMSSASIHFS*SPEDPA Trigger: GGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCT...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCGTATGCACACAAACATaGACTTCTGCATTTAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LGIACFPVLTVIKFYQITVCTQT*TSAFKA Trigger: TGCTTTAAATGCAGAAGTTCATGTTTGTGTGCATAC...GGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR TCA 72 bp | TTTGCGGCAGAAGAGCACTCTCAACCTCAGGATCCATaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: FAAEEHSQPQDP*VCVCVCVCVLM Trigger: CATCAACACACACACACACACACACACACACACTCATGGATCCTGAGGTTGAGAGTGCTCTTCTGCCGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGGTATTATAAGCATCCATTTTTCTaGATCTCCAGAAGACCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PWPRVDITWEIQYTKGYYKHPFF*ISRRPC Trigger: GCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTT...ATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR CCA 72 bp | TGTCTTATAGGTGATGACCTTTCTATCCACAAACCCTaGCCCAGAGTGGATATAACCTGGGAAATTCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: CLIGDDLSIHKP*PRVDITWEIQY Trigger: ATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGGTTTGTGGATAGAAAGGTCATCACCTATAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR TCA 72 bp | ATCAAGTTTTATCAGATCACCATAGCTGTTTCCATTTaGGTTAGGAAGGTTTTTGCGGCAGAAGAGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: IKFYQITIAVSI*VRKVFAAEEHS Trigger: AGAGTGCTCTTCTGCCGCAAAAACCTTCCTAACTCAAATGGAAACAGCTATGGTGATCTGATAAAACTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| 3UTR CCA 72 bp | TCTATCCACAAACCCTGGCCCAGAGTGGATATAACCTaGGAAATTCAGTATACAAAGGGGTATTATTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: SIHKPWPRVDIT*EIQYTKGYYLK Trigger: TTTTAAATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGGTTTGTGGATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | TCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTCGATACGGAGCGCACATAGGCTaGGGTAGGTGCGCCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: SIFLDLQKTLPSLAPLRYGAHIG*GRCAHR Trigger: GCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCC...GTATCGAAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTTCGCAGGCACCCTTCTaGACTGGCACAGCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSTSKMITLLCGSMMSSASQAPF*TGTAGS Trigger: GCTCCCGGCTGTGCCAGTGCAGAAGGGTGCCTGCGA...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTATAGGCTGGGGTAGGTaGGCCCATCGCTGCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: VSTSKMITLLCGSMMSSAIGWGR*AHRCRT Trigger: TGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTAT...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | CCCTGGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGGTATTATCATCCTCAGACACTATaGACCCAGAGCCGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PWPRVDITWEIQYTKGYYHPQTL*TQSRWR Trigger: CCTCCAGCGGCTCTGGGTTCATAGTGTCTGAGGATG...ATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | AAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTTCTCAACCCCGAGCTTaGAGCAGCCGATCCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: KASIFLDLQKTLPSLAPLSQPRA*SSRSLN Trigger: ATTCAGGGATCGGCTGCTGCAAGCTCGGGGTTGAGA...AAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGGTATTATGCCCAGCAGCAGTACTaGAAGCTCAGTATCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PWPRVDITWEIQYTKGYYAQQQY*KLSIWL Trigger: GAGCCAGATACTGAGCTTCCAGTACTGCTGCTGGGC...ATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | TCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTCGATACGTGGTGGTGACAGGTTaGCCGTTTATGCTGACAATT | + |
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Preference number: 4 (lower is better) Translates to: SIFLDLQKTLPSLAPLRYVVVTG*PFMLTI Trigger: AATTGTCAGCATAAACGGGCAACCTGTCACCACCAC...GTATCGAAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | AAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTGAGGAAGGGATTTCCTaGTTGGTGAGAGGTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: KASIFLDLQKTLPSLAPLEEGIS*LVRGDL Trigger: CAGATCACCTCTCACCAACCAGGAAATCCCTTCCTC...AAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | TCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTCGATACCCCCCAGAATTTCCATaGTTAATGATGGCATCCGTC | + |
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Preference number: 4 (lower is better) Translates to: SIFLDLQKTLPSLAPLRYPPEFP*LMMASV Trigger: GACGGATGCCATCATTAACCATGGAAATTCTGGGGG...GTATCGAAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | TTAGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCCTCTCTGTGTGGTGCTaGCAATCCCTGCAGTCACGG | + |
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Preference number: 4 (lower is better) Translates to: LGIACFPVLTVIKFYQITLSVWC*QSLQSR Trigger: CCGTGACTGCAGGGATTGTCAGCACCACACAGAGAG...GGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | TCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTCGATACCTGACAATTACATCATaGTCTCTCAACCCCGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SIFLDLQKTLPSLAPLRYLTITS*SLNPEL Trigger: AAGCTCGGGGTTGAGAGACCATGATGTAATTGTCAG...GTATCGAAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGCAGTCACGGTGTTCTaGAGAGAAAATGGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHAVTVF*RENGLP Trigger: GGGCAGCCCATTTTCTCTGCAGAACACCGTGACTGC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGGTGCTGACAATCCCTaGAGTCACGGTGTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHGADNP*SHGVLQ Trigger: CTGCAGAACACCGTGACTGCAGGGATTGTCAGCACC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | GCATTTAAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACGCAAAAGAGATCCCTaGAGTCACCTTCAGAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: AFKASIFLDLQKTLPSLARKRDP*SHLQSV Trigger: AACACTCTGAAGGTGACTGCAGGGATCTCTTTTGCG...TGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTTAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGGATTTCCTGGTTGGTaGGAGGTGATCTGCGGAACA | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHGFPGW*EVICGT Trigger: TGTTCCGCAGATCACCTCTCACCAACCAGGAAATCC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGAAGGAGGTTCAGAGTaGGAGGCAGCATTCGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHEGGSE*EAAFED Trigger: GTCTTCGAATGCTGCCTCTCACTCTGAACCTCCTTC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTGCAGAGAAAATGGGCTaGCCAAAGCTACCACAAACT | + |
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Preference number: 4 (lower is better) Translates to: VSTSKMITLLCGSMMSSAAEKMG*PKLPQT Trigger: AGTTTGTGGTAGCTTTGGGCAGCCCATTTTCTCTGC...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGTTCTGCAGAGAAAATaGGCTGCCCAAAGCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHVLQRK*AAQSYH Trigger: GTGGTAGCTTTGGGCAGCCCATTTTCTCTGCAGAAC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CCA 90 bp | CATCTCTGGCACCTCTTCGATACAAAACCAGGTAATATAACTGGTTTTGCTAGGCACATCAGGGAACTCTaGATCTTGCCTCTTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: HLWHLFDTKPGNITGFARHIREL*ILPLHF Trigger: GAAATGAAGAGGCAAGATCCAGAGTTCCCTGATGTG...CCTAGCAAAACCAGTTATATTACCTGGTTTTGTATCGAAGAGGTGCCAGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | CATCTCTGGCACCTCTTCGATACAAAACCAGGTAATATAACTGGTTTTGCTAGGGATATAGTCTATGTCTaGATTCTTCAGTCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HLWHLFDTKPGNITGFARDIVYV*ILQSQL Trigger: GAGCTGGGACTGAAGAATTCAGACATAGACTATATC...CCTAGCAAAACCAGTTATATTACCTGGTTTTGTATCGAAGAGGTGCCAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATTGCCTCTTCATTTCCTaGAGGAGGTTCAGAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHCLFIS*RRFRVR Trigger: TCTCACTCTGAACCTCCTTCAGGAAATGAAGAGGCA...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTTTCCTCGAAGCACAATaGTGGAGAGAAAGTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: VSTSKMITLLCGSMMSSAFLEAQ*WRESHC Trigger: ACAATGACTTTCTCTCCATCATTGTGCTTCGAGGAA...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR TCA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATGTCAGAAACAAGGTTTaGCTTCCTCGAAGCACAATG | + |
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Preference number: 4 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHVRNKV*LPRSTM Trigger: CATTGTGCTTCGAGGAAGTCAAACCTTGTTTCTGAC...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | GCACAGCCGGGAGCGCGCCCCGCTGGCGAGCGGCTCGGTTCTCCTTaGGGAGCGCACATAGGCTGGGGTAGGTGCGCCCATCGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: AQPGARPAGERLGSP*GAHIGWGRCAHRCR Trigger: GCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACCGAGCCGCTCGCCAGCGGGGCGCGCTCCCGGCTGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | CCCTGCTCTTGTGGTCCCTGCTTCCTCGCAGGCACCCTTCTGCACTaGCACAGCCGGGAGCGCGCCCCGCTGGCGAGCGGCTCGGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PCSCGPCFLAGTLLH*HSRERAPLASGSVL Trigger: GAGAACCGAGCCGCTCGCCAGCGGGGCGCGCTCCCGGCTGTGCCAGTGCAGAAGGGTGCCTGCGAGGAAGCAGGGACCACAAGAGCAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | TCTCCTTGCGGAGCGCACATAGGCTGGGGTAGGTGCGCCCATCGCTaGCGCACACTACCGCATCCTCAGCACCCTCCGCGCAGCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SPCGAHIGWGRCAHR*RTLPHPQHPPRSRR Trigger: CCTGCGGCTGCGCGGAGGGTGCTGAGGATGCGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | CCCGCTGGCGAGCGGCTCGGTTCTCCTTGCGGAGCGCACATAGGCTaGGGTAGGTGCGCCCATCGCTGCCGCACACTACCGCATCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PAGERLGSPCGAHIG*GRCAHRCRTLPHPQ Trigger: CTGAGGATGCGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACCGAGCCGCTCGCCAGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | GAGCGGCTCGGTTCTCCTTGCGGAGCGCACATAGGCTGGGGTAGGTaGGCCCATCGCTGCCGCACACTACCGCATCCTCAGCACCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: ERLGSPCGAHIGWGR*AHRCRTLPHPQHPP Trigger: CGGAGGGTGCTGAGGATGCGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACCGAGCCGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | TGGGATCGCAGGCATCGGGACAGGGCAGCGAGACTCTGGACCTCCTaGCCTCGGCCCACGGAACAGGCACGGCTGGTAGCAGCAACCACA | + |
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Preference number: 5 (lower is better) Translates to: WDRRHRDRAARLWTS*PRPTEQARLVAATT Trigger: TGTGGTTGCTGCTACCAGCCGTGCCTGTTCCGTGGGCCGAGGCCAGGAGGTCCAGAGTCTCGCTGCCCTGTCCCGATGCCTGCGATCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | GATGAAGTTGTACTTTCTCCGGAGCCGCCCTGCTCTTGTGGTCCCTaGTTCCTCGCAGGCACCCTTCTGCACTGGCACAGCCGGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: DEVVLSPEPPCSCGP*FLAGTLLHWHSRER Trigger: GCGCTCCCGGCTGTGCCAGTGCAGAAGGGTGCCTGCGAGGAAGCAGGGACCACAAGAGCAGGGCGGCTCCGGAGAAAGTACAACTTCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 90 bp | GAACCCAGAGCCGCTGGAGGAAGGGATTTCCTGGTTGGTGAGAGGTaGTCTGCGGAACAGCTGCAAGTGGACCACAGACGGCGCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: EPRAAGGRDFLVGER*SAEQLQVDHRRRHL Trigger: AAGGTGGCGCCGTCTGTGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAATCCCTTCCTCCAGCGGCTCTGGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | CAGTCCCAGCTCTCTGCCGCCTCTCTGTGTGGTGCTGACAATCCCTaGAGTCACGGTGTTCTGCAGAGAAAATGGGCTGCCCAAAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: QSQLSAASLCGADNP*SHGVLQRKWAAQSY Trigger: GTAGCTTTGGGCAGCCCATTTTCTCTGCAGAACACCGTGACTGCAGGGATTGTCAGCACCACACAGAGAGGCGGCAGAGAGCTGGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | TTATGGTCGATGTCTTTGACGGTGGCTTCATACCGGGCCCCGCTCTaGAGCTCTACCTGGATCTTCTGCTGGTTGGTGAGGACGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LWSMSLTVASYRAPL*SSTWIFCWLVRTWA Trigger: TGCCCACGTCCTCACCAACCAGCAGAAGATCCAGGTAGAGCTCCAGAGCGGGGCCCGGTATGAAGCCACCGTCAAAGACATCGACCATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 90 bp | CTGAATTCTTCAGTCCCAGCTCTCTGCCGCCTCTCTGTGTGGTGCTaGCAATCCCTGCAGTCACGGTGTTCTGCAGAGAAAATGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LNSSVPALCRLSVWC*QSLQSRCSAEKMGC Trigger: GCAGCCCATTTTCTCTGCAGAACACCGTGACTGCAGGGATTGTCAGCACCACACAGAGAGGCGGCAGAGAGCTGGGACTGAAGAATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | TCCTCAGACACTATGAACCCAGAGCCGCTGGAGGAAGGGATTTCCTaGTTGGTGAGAGGTGATCTGCGGAACAGCTGCAAGTGGACCACA | + |
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Preference number: 5 (lower is better) Translates to: SSDTMNPEPLEEGIS*LVRGDLRNSCKWTT Trigger: TGTGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAATCCCTTCCTCCAGCGGCTCTGGGTTCATAGTGTCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | AAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCACCTCTTGGAGCCGCCCTGCTCTaGTGGTCCCTGCTTCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: KASIFLDLQKTLPSLAPLGAALL*WSLLPR Trigger: GCGAGGAAGCAGGGACCACAAGAGCAGGGCGGCTCC...AAGAGGTGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | AGCTCAGTATCTGGCTCGATCTTAATCAGTGCAAGGTCCAGTTTATaGTCGATGTCTTTGACGGTGGCTTCATACCGGGCCCCGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSVSGSILISARSSL*SMSLTVASYRAPLW Trigger: CCAGAGCGGGGCCCGGTATGAAGCCACCGTCAAAGACATCGACCATAAACTGGACCTTGCACTGATTAAGATCGAGCCAGATACTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 90 bp | GAGGTCAGAGGATCGGCCCAGCAGCAGTACTGGAAGCTCAGTATCTaGCTCGATCTTAATCAGTGCAAGGTCCAGTTTATGGTCGATGTC | + |
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Preference number: 5 (lower is better) Translates to: EVRGSAQQQYWKLSI*LDLNQCKVQFMVDV Trigger: GACATCGACCATAAACTGGACCTTGCACTGATTAAGATCGAGCCAGATACTGAGCTTCCAGTACTGCTGCTGGGCCGATCCTCTGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 90 bp | GGAACTCTGGATCTTGCCTCTTCATTTCCTGAAGGAGGTTCAGAGTaGGAGGCAGCATTCGAAGACCCAGGTATTTCTTCTGCAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GTLDLASSFPEGGSE*EAAFEDPGISSAKG Trigger: CCCCTTTGCAGAAGAAATACCTGGGTCTTCGAATGCTGCCTCTCACTCTGAACCTCCTTCAGGAAATGAAGAGGCAAGATCCAGAGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 90 bp | CCAGAACTCACATCAGGGAACTCTGGATCTTGCCTCTTCATTTCCTaGAGGAGGTTCAGAGTGAGAGGCAGCATTCGAAGACCCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: PELTSGNSGSCLFIS*RRFRVRGSIRRPRY Trigger: ATACCTGGGTCTTCGAATGCTGCCTCTCACTCTGAACCTCCTTCAGGAAATGAAGAGGCAAGATCCAGAGTTCCCTGATGTGAGTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | CAGGAACTGTCTGATCCGATCAGAGGGGATCGCAAAAGAGATCCCTaGAGTCACCTTCAGAGTGTTTATACCAATCACGTCGCCATCCAA | + |
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Preference number: 5 (lower is better) Translates to: QELSDPIRGDRKRDP*SHLQSVYTNHVAIQ Trigger: TTGGATGGCGACGTGATTGGTATAAACACTCTGAAGGTGACTGCAGGGATCTCTTTTGCGATCCCCTCTGATCGGATCAGACAGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | GCATTTAAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCAGTGAGGACGTGGGCATaGGTGACAATGAGCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: AFKASIFLDLQKTLPSLAVRTWA*VTMSPS Trigger: GGATGGGCTCATTGTCACCAATGCCCACGTCCTCAC...TGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTTAAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGGTATTATTTCTGCAAAGGGGCCTaGCCTTTCAACTGGCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PWPRVDITWEIQYTKGYYFCKGA*PFNWRS Trigger: TGAGCGCCAGTTGAAAGGCAAGGCCCCTTTGCAGAA...ATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 90 bp | ATTTCCATGGTTAATGATGGCATCCGTCTGGATATAGTCTATGTCTaGATTCTTCAGTCCCAGCTCTCTGCCGCCTCTCTGTGTGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ISMVNDGIRLDIVYV*ILQSQLSAASLCGA Trigger: AGCACCACACAGAGAGGCGGCAGAGAGCTGGGACTGAAGAATTCAGACATAGACTATATCCAGACGGATGCCATCATTAACCATGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | CAGCAGCAGTACTGGAAGCTCAGTATCTGGCTCGATCTTAATCAGTaGAAGGTCCAGTTTATGGTCGATGTCTTTGACGGTGGCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: QQQYWKLSIWLDLNQ*KVQFMVDVFDGGFI Trigger: TATGAAGCCACCGTCAAAGACATCGACCATAAACTGGACCTTGCACTGATTAAGATCGAGCCAGATACTGAGCTTCCAGTACTGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | GTTTCTACCTCCAAAATGATCACACTCCTGTGTGGTAGTATGATGTCATCAGCTTGGATCTTCTGCTGGTaGGTGAGGACGTGGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: VSTSKMITLLCGSMMSSAWIFCW*VRTWAL Trigger: CAATGCCCACGTCCTCACCAACCAGCAGAAGATCCA...AGCTGATGACATCATACTACCACACAGGAGTGTGATCATTTTGGAGGTAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | TTAGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCCTCTCAACCCCGAGCTaGCAGCAGCCGATCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LGIACFPVLTVIKFYQITLSTPS*QQPIPE Trigger: TTCAGGGATCGGCTGCTGCAAGCTCGGGGTTGAGAG...GGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | CCCGTTTATGCTGACAATTACATCATGGTCTCTCAACCCCGAGCTTaGAGCAGCCGATCCCTGAATCACTTCATATACAAAAACTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: PVYADNYIMVSQPRA*SSRSLNHFIYKNSR Trigger: TCTGGAGTTTTTGTATATGAAGTGATTCAGGGATCGGCTGCTGCAAGCTCGGGGTTGAGAGACCATGATGTAATTGTCAGCATAAACGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 90 bp | TTGTCCTTAACAGCTTCAATGACATCAGTTGTGGTGGTGACAGGTTaGCCGTTTATGCTGACAATTACATCATGGTCTCTCAACCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: LSLTASMTSVVVVTG*PFMLTITSWSLNPE Trigger: CTCGGGGTTGAGAGACCATGATGTAATTGTCAGCATAAACGGGCAACCTGTCACCACCACAACTGATGTCATTGAAGCTGTTAAGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATACTGCGGCGATGAAGTaGTACTTTCTCCGGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHTAAMK*YFLRSR Trigger: GCGGCTCCGGAGAAAGTACAACTTCATCGCCGCAGT...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCCAGAGTGGATATAACCTGGGAAATTCAGTATACAAAGGGGTATTATTGTGGTGGTGACAGGTaGCCCGTTTATGCTGACAAT | + |
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Preference number: 5 (lower is better) Translates to: PWPRVDITWEIQYTKGYYCGGDR*PVYADN Trigger: ATTGTCAGCATAAACGGGCAACCTGTCACCACCACA...ATAATACCCCTTTGTATACTGAATTTCCCAGGTTATATCCACTCTGGGCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | GCATTTAAAGCATCCATTTTTCTTGATCTCCAGAAGACCCTGCCATCTCTGGCAAGGGAACTCTGGATCTaGCCTCTTCATTTCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: AFKASIFLDLQKTLPSLARELWI*PLHFLK Trigger: CTTCAGGAAATGAAGAGGCAAGATCCAGAGTTCCCT...TGCCAGAGATGGCAGGGTCTTCTGGAGATCAAGAAAAATGGATGCTTTAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS-3UTR CAA 90 bp | AGGAATTGCCTGCTTTCCAGTTCTTACTGTCATCAAGTTTTATCAGATCACCATTTATGGTCGATGTCTTaGACGGTGGCTTCATACCGG | + |
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Preference number: 5 (lower is better) Translates to: RNCLLSSSYCHQVLSDHHLWSMS*TVASYR Trigger: CCGGTATGAAGCCACCGTCAAAGACATCGACCATAA...ATGGTGATCTGATAAAACTTGATGACAGTAAGAACTGGAAAGCAGGCAATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | TGTGGTCCCTGCTTCCTCGCAGGCACCCTTCTGCACTaGCACAGCCGGGAGCGCGCCCCGCTGGCGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: CGPCFLAGTLLH*HSRERAPLASG Trigger: GCCGCTCGCCAGCGGGGCGCGCTCCCGGCTGTGCCAGTGCAGAAGGGTGCCTGCGAGGAAGCAGGGACCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | GGAGCGCGCCCCGCTGGCGAGCGGCTCGGTTCTCCTTaGGGAGCGCACATAGGCTGGGGTAGGTGCGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GARPAGERLGSP*GAHIGWGRCAH Trigger: ATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACCGAGCCGCTCGCCAGCGGGGCGCGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | CCCTTCTGCACTGGCACAGCCGGGAGCGCGCCCCGCTaGCGAGCGGCTCGGTTCTCCTTGCGGAGCGCACAT | + |
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Preference number: 6 (lower is better) Translates to: PFCTGTAGSAPR*RAARFSLRSAH Trigger: ATGTGCGCTCCGCAAGGAGAACCGAGCCGCTCGCCAGCGGGGCGCGCTCCCGGCTGTGCCAGTGCAGAAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | GCTCTTGTGGTCCCTGCTTCCTCGCAGGCACCCTTCTaGACTGGCACAGCCGGGAGCGCGCCCCGCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: ALVVPASSQAPF*TGTAGSAPRWR Trigger: TCGCCAGCGGGGCGCGCTCCCGGCTGTGCCAGTGCAGAAGGGTGCCTGCGAGGAAGCAGGGACCACAAGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | GGAGCGCACATAGGCTGGGGTAGGTGCGCCCATCGCTaGCGCACACTACCGCATCCTCAGCACCCTCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: GAHIGWGRCAHR*RTLPHPQHPPR Trigger: GCGCGGAGGGTGCTGAGGATGCGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | AGGCATCGGGACAGGGCAGCGAGACTCTGGACCTCCTaGCCTCGGCCCACGGAACAGGCACGGCTGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RHRDRAARLWTS*PRPTEQARLVA Trigger: TGCTACCAGCCGTGCCTGTTCCGTGGGCCGAGGCCAGGAGGTCCAGAGTCTCGCTGCCCTGTCCCGATGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | GAGCGGCTCGGTTCTCCTTGCGGAGCGCACATAGGCTaGGGTAGGTGCGCCCATCGCTGCCGCACACTACCG | + |
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Preference number: 6 (lower is better) Translates to: ERLGSPCGAHIG*GRCAHRCRTLP Trigger: CGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACCGAGCCGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | GGTTCTCCTTGCGGAGCGCACATAGGCTGGGGTAGGTaGGCCCATCGCTGCCGCACACTACCGCATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GSPCGAHIGWGR*AHRCRTLPHPQ Trigger: CTGAGGATGCGGTAGTGTGCGGCAGCGATGGGCGCACCTACCCCAGCCTATGTGCGCTCCGCAAGGAGAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | TGCGGCGATGAAGTTGTACTTTCTCCGGAGCCGCCCTaGTCTTGTGGTCCCTGCTTCCTCGCAGGCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: CGDEVVLSPEPP*SCGPCFLAGTL Trigger: AAGGGTGCCTGCGAGGAAGCAGGGACCACAAGAGCAGGGCGGCTCCGGAGAAAGTACAACTTCATCGCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | TGGTTGGTGAGAGGTGATCTGCGGAACAGCTGCAAGTaGACCACAGACGGCGCCACCTTCTCCACCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: WLVRGDLRNSCK*TTDGATFSTTA Trigger: CGCAGTGGTGGAGAAGGTGGCGCCGTCTGTGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | TACCGGGCCCCGCTCTGGAGCTCTACCTGGATCTTCTaGTGGTTGGTGAGGACGTGGGCATTGGTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: YRAPLWSSTWIF*WLVRTWALVTM Trigger: CATTGTCACCAATGCCCACGTCCTCACCAACCAGCAGAAGATCCAGGTAGAGCTCCAGAGCGGGGCCCGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 72 bp | ACCCAGAGCCGCTGGAGGAAGGGATTTCCTGGTTGGTaGGAGGTGATCTGCGGAACAGCTGCAAGTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: TQSRWRKGFPGW*EVICGTAASGP Trigger: TGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAATCCCTTCCTCCAGCGGCTCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | ATTTCCTGGTTGGTGAGAGGTGATCTGCGGAACAGCTaGAAGTGGACCACAGACGGCGCCACCTTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: ISWLVRGDLRNS*KWTTDGATFST Trigger: GGTGGAGAAGGTGGCGCCGTCTGTGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | ATGTCTTTGACGGTGGCTTCATACCGGGCCCCGCTCTaGAGCTCTACCTGGATCTTCTGCTGGTTGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MSLTVASYRAPL*SSTWIFCWLVR Trigger: CCTCACCAACCAGCAGAAGATCCAGGTAGAGCTCCAGAGCGGGGCCCGGTATGAAGCCACCGTCAAAGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 72 bp | TCAGTCCCAGCTCTCTGCCGCCTCTCTGTGTGGTGCTaGCAATCCCTGCAGTCACGGTGTTCTGCAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SVPALCRLSVWC*QSLQSRCSAEK Trigger: TTTCTCTGCAGAACACCGTGACTGCAGGGATTGTCAGCACCACACAGAGAGGCGGCAGAGAGCTGGGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | AGCCCGGAGGTCAGAGGATCGGCCCAGCAGCAGTACTaGAAGCTCAGTATCTGGCTCGATCTTAATCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPEVRGSAQQQY*KLSIWLDLNQC Trigger: GCACTGATTAAGATCGAGCCAGATACTGAGCTTCCAGTACTGCTGCTGGGCCGATCCTCTGACCTCCGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 72 bp | ATGAACCCAGAGCCGCTGGAGGAAGGGATTTCCTGGTaGGTGAGAGGTGATCTGCGGAACAGCTGCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: MNPEPLEEGISW*VRGDLRNSCKW Trigger: CCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAATCCCTTCCTCCAGCGGCTCTGGGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 90 bp | TCAGACACTATGAACCCAGAGCCGCTGGAGGAAGGGATTTCCTGGTaGGTGAGAGGTGATCTGCGGAACAGCTGCAAGTGGACCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: SDTMNPEPLEEGISW*VRGDLRNSCKWTTD Trigger: GTCTGTGGTCCACTTGCAGCTGTTCCGCAGATCACCTCTCACCAACCAGGAAATCCCTTCCTCCAGCGGCTCTGGGTTCATAGTGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 90 bp | GGCTCGATCTTAATCAGTGCAAGGTCCAGTTTATGGTCGATGTCTTaGACGGTGGCTTCATACCGGGCCCCGCTCTGGAGCTCTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSILISARSSLWSMS*TVASYRAPLWSSTW Trigger: CCAGGTAGAGCTCCAGAGCGGGGCCCGGTATGAAGCCACCGTCAAAGACATCGACCATAAACTGGACCTTGCACTGATTAAGATCGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | GTGACAGGTTGCCCGTTTATGCTGACAATTACATCATaGTCTCTCAACCCCGAGCTTGCAGCAGCCGATCCC | + |
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Preference number: 6 (lower is better) Translates to: VTGCPFMLTITS*SLNPELAAADP Trigger: GGGATCGGCTGCTGCAAGCTCGGGGTTGAGAGACCATGATGTAATTGTCAGCATAAACGGGCAACCTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 72 bp | TTAATCAGTGCAAGGTCCAGTTTATGGTCGATGTCTTaGACGGTGGCTTCATACCGGGCCCCGCTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LISARSSLWSMS*TVASYRAPLWS Trigger: GCTCCAGAGCGGGGCCCGGTATGAAGCCACCGTCAAAGACATCGACCATAAACTGGACCTTGCACTGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | TGTGTGGTGCTGACAATCCCTGCAGTCACGGTGTTCTaGAGAGAAAATGGGCTGCCCAAAGCTACCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: CVVLTIPAVTVF*RENGLPKATTN Trigger: GTTTGTGGTAGCTTTGGGCAGCCCATTTTCTCTGCAGAACACCGTGACTGCAGGGATTGTCAGCACCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | TCTGGCTCGATCTTAATCAGTGCAAGGTCCAGTTTATaGTCGATGTCTTTGACGGTGGCTTCATACCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSILISARSSL*SMSLTVASYRA Trigger: GGCCCGGTATGAAGCCACCGTCAAAGACATCGACCATAAACTGGACCTTGCACTGATTAAGATCGAGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CCA 72 bp | GGATCGGCCCAGCAGCAGTACTGGAAGCTCAGTATCTaGCTCGATCTTAATCAGTGCAAGGTCCAGTTTATG | + |
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Preference number: 6 (lower is better) Translates to: GSAQQQYWKLSI*LDLNQCKVQFM Trigger: CATAAACTGGACCTTGCACTGATTAAGATCGAGCCAGATACTGAGCTTCCAGTACTGCTGCTGGGCCGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 72 bp | GTTAATGATGGCATCCGTCTGGATATAGTCTATGTCTaGATTCTTCAGTCCCAGCTCTCTGCCGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VNDGIRLDIVYV*ILQSQLSAASL Trigger: CAGAGAGGCGGCAGAGAGCTGGGACTGAAGAATTCAGACATAGACTATATCCAGACGGATGCCATCATTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS TCA 72 bp | TGGTCTCTCAACCCCGAGCTTGCAGCAGCCGATCCCTaGATCACTTCATATACAAAAACTCCAGAACTCACA | + |
|
Preference number: 6 (lower is better) Translates to: WSLNPELAAADP*ITSYTKTPELT Trigger: TGTGAGTTCTGGAGTTTTTGTATATGAAGTGATTCAGGGATCGGCTGCTGCAAGCTCGGGGTTGAGAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS GCA 72 bp | TCTGATCCGATCAGAGGGGATCGCAAAAGAGATCCCTaGAGTCACCTTCAGAGTGTTTATACCAATCACGTC | + |
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Preference number: 6 (lower is better) Translates to: SDPIRGDRKRDP*SHLQSVYTNHV Trigger: GACGTGATTGGTATAAACACTCTGAAGGTGACTGCAGGGATCTCTTTTGCGATCCCCTCTGATCGGATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 90 bp | ATTGTCCTTAACAGCTTCAATGACATCAGTTGTGGTGGTGACAGGTaGCCCGTTTATGCTGACAATTACATCATGGTCTCTCAACCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: IVLNSFNDISCGGDR*PVYADNYIMVSQPR Trigger: TCGGGGTTGAGAGACCATGATGTAATTGTCAGCATAAACGGGCAACCTGTCACCACCACAACTGATGTCATTGAAGCTGTTAAGGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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| CDS CAA 72 bp | AACAGCTTCAATGACATCAGTTGTGGTGGTGACAGGTaGCCCGTTTATGCTGACAATTACATCATGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSFNDISCGGDR*PVYADNYIMVS Trigger: AGAGACCATGATGTAATTGTCAGCATAAACGGGCAACCTGTCACCACCACAACTGATGTCATTGAAGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084031.6 |
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