Pregenerated sensors for HTRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068329Ensembl transcript IDs: ENSMUST00000089645.13, ENSMUST00000113962.8, ENSMUST00000113963.8, ENSMUST00000122955.8, ENSMUST00000132099.8, ENSMUST00000134606.8, ENSMUST00000150217.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCATTCATTCTGTaGCCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGCGCC | + |
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Preference number: 1 (lower is better) Translates to: QGKSFTLLPVQSFIL*PRGSHIRSVSLIRA Trigger: GGCGCGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCACAGAATGAATGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCCCGCACTGCCAGCTGTaGTTGGGTTCGAACAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFPHCQL*LGSNSF Trigger: GAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGG...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATTCATTCTGTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGCCAATTTCTCCCCAATaGCCAAGATCACATCACCAG | + |
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Preference number: 2 (lower is better) Translates to: VIHSVTSGVTYKVSVSDPPISPQ*PRSHHQ Trigger: CTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGG...CGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCACAGAATGAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| 3UTR GCA 72 bp | AGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTaGCGGTCCAGTCATTCATTCTGTGACCTCGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: SKEEIRARASHS*RSSHSFCDLGG Trigger: ACCCCCGAGGTCACAGAATGAATGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| 3UTR CCA 72 bp | AAACATCTTCAGCATTTTGTGCCAATTTCTCCCCAATaGCCAAGATCACATCACCAGGCCGCAGACCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KHLQHFVPISPQ*PRSHHQAADQP Trigger: GGGCTGGTCTGCGGCCTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | CCCCAATGGCCAAGATCACATCACCAGGCCGCAGACCAGCCCTGTGTGCGGGGGTCCCAGGTCCCTGGCTaGGCGCTGAGCAGAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PQWPRSHHQAADQPCVRGSQVPG*ALSRAD Trigger: GTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGA...CCCCCGCACACAGGGCTGGTCTGCGGCCTGGTGATGTGATCTTGGCCATTGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | GTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGCGCCGGATCCGCGGAGTCCCAGGTCCCTaGCTGGGCGCTGAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VTSGVTYKVSVSDPRRIRGVPGP*LGAEQS Trigger: GCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCC...GCGGATCCGGCGCGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | TCCCCAATGGCCAAGATCACATCACCAGGCCGCAGACCAGCCCTGTGTGCGGGGGCTTCCTCCAGAAGATaGCCCCCAAAGCCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPMAKITSPGRRPALCAGASSRR*PPKPAM Trigger: CATGGCGGGCTTTGGGGGGCATCTTCTGGAGGAAGC...CCCCGCACACAGGGCTGGTCTGCGGCCTGGTGATGTGATCTTGGCCATTGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CCGCAGACCAGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACGGAGTCCCAGGTCCCTaGCTGGGCGCTGAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PQTSPVCGGAQDNFMNEDGVPGP*LGAEQS Trigger: GCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCC...GTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCTGGTCTGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | CCAGGACTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCCCCCAAAGCCCGCCATaGCCGAAGGCTCCAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLMQRLEGLALRRFTDSPQSPP*PKAPVC Trigger: GCAAACTGGAGCCTTCGGGCATGGCGGGCTTTGGGG...GGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAGTCCTGG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | AGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACACCATGCTGCACCACTGCACCTCCTaGGCCCACCGCCACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCGGAQDNFMNEDTMLHHCTS*AHRHRQ Trigger: CTGGCGGTGGCGGTGGGCGCAGGAGGTGCAGTGGTG...CAGCATGGTGTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTTCCCAGGTCCCTGGCTaGGCGCTGAGCAGAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMQRLEGLALRRFTDSSSSQVPG*ALSRAD Trigger: GTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGA...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTCTGATCCGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGTCCCTGGCTGGGCGCTaGGCAGAGCTGACAATACCA | + |
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Preference number: 4 (lower is better) Translates to: VSLIRAGSALPAVIGFEQSLAGR*AELTIP Trigger: TGGTATTGTCAGCTCTGCTCAGCGCCCAGCCAGGGA...CTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCGGATCAGAGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCCACCACTGCACCTCCTaGGCCCACCGCCACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGHHCTS*AHRHRQ Trigger: CTGGCGGTGGCGGTGGGCGCAGGAGGTGCAGTGGTG...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | GGGGTCACATATAAGGTCAGTGTCTCTGATCCGCGCCGGATCCGCACTGCCAGCGGCCGAGGGGCAGTGTaGGAAGAGGCTCCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GVTYKVSVSDPRRIRTASGRGAV*EEAPWF Trigger: AAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCC...GCTGGCAGTGCGGATCCGGCGCGGATCAGAGACACTGACCTTATATGTGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAGGAGTCCCAGGTCCCTaGCTGGGCGCTGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGGVPGP*LGAEQS Trigger: GCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCC...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCGGAGTCCCAGGTCCCTaGCTGGGCGCTGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVGVPGP*LGAEQS Trigger: GCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCC...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCTCCCTGGCTGGGCGCTaGGCAGAGCTGACAATACCA | + |
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Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTSLAGR*AELTIP Trigger: TGGTATTGTCAGCTCTGCTCAGCGCCCAGCCAGGGA...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCGCTTCCTCCAGAAGATaGCCCCCAAAGCCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTASSRR*PPKPAM Trigger: CATGGCGGGCTTTGGGGGGCATCTTCTGGAGGAAGC...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCGGCTTCCAGGGCTCCTaGGGGCCTCCTGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGGFQGS*GPPGHW Trigger: CCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCC...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVPGRSG*RSRNSS Trigger: GCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGG...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPPGRSG*RSRNSS Trigger: GCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGG...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCGGCCGAGGGGCAGTGTaGGAAGAGGCTCCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTGRGAV*EEAPWF Trigger: AAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCC...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACACCATGTCCCAGGTCCCTGGCTaGGCGCTGAGCAGAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TSPVCGGAQDNFMNEDTMSQVPG*ALSRAD Trigger: GTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGA...CATGGTGTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | CCAGGACTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCCTGGTCACTGGAGCCTaGAGTCCCCACATTCAATCG | + |
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Preference number: 4 (lower is better) Translates to: PGLMQRLEGLALRRFTDSLVTGA*SPHIQS Trigger: CGATTGAATGTGGGGACTTCAGGCTCCAGTGACCAG...GGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCATTCATTCTGTGGCTTCCAGGGCTCCTaGGGGCCTCCTGGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: EEIRARASHSCRSSHSFCGFQGS*GPPGHW Trigger: CCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCC...ACAGAATGAATGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAACACCACTGCACCTCCTaGGCCCACCGCCACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQHHCTS*AHRHRQ Trigger: CTGGCGGTGGCGGTGGGCGCAGGAGGTGCAGTGGTG...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTCTGGTCACTGGAGCCTaGAGTCCCCACATTCAATCG | + |
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Preference number: 4 (lower is better) Translates to: LMQRLEGLALRRFTDSSSLVTGA*SPHIQS Trigger: CGATTGAATGTGGGGACTTCAGGCTCCAGTGACCAG...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCCTGGTCACTGGAGCCTaGAGTCCCCACATTCAATCG | + |
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Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTLVTGA*SPHIQS Trigger: CGATTGAATGTGGGGACTTCAGGCTCCAGTGACCAG...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGTCCCTGGCTGGGCGCTaGGCAGAGCTGACAATACCA | + |
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Preference number: 4 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPSLAGR*AELTIP Trigger: TGGTATTGTCAGCTCTGCTCAGCGCCCAGCCAGGGA...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCCCGAAGGCTCCAGTTTaGACCCCGCCCCGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGPKAPV*TPPRFQ Trigger: CTGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGG...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGCTTCCAGGGCTCCTaGGGGCCTCCTGGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQGFQGS*GPPGHW Trigger: CCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCC...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | CCAGGACTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGLMQRLEGLALRRFTDSQCGNV*YGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTG...GGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKPGRSG*RSRNSS Trigger: GCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGG...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCCTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTLIRLR*GLHGRR Trigger: TCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAG...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | TCTGATCCGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCACTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SDPRRIRTASCDWVRTASLIRLR*GLHGRR Trigger: TCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAG...TGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCGGATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCATAAACATGGCCGAGGGGCAGTGTaGGAAGAGGCTCCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RAGSALPAVIGFEQLHKHGRGAV*EEAPWF Trigger: AAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCC...ATGTTTATGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGTCCCAGGTCCCTGGCTaGGCGCTGAGCAGAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKSQVPG*ALSRAD Trigger: GTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGA...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | CCAGGACTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: PGLMQRLEGLALRRFTDSRGSLV*ILSVAM Trigger: CATTGCCACACTGAGGATTCAAACCAAGGAGCCTCT...GGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAGTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGACCGCACTGCCAGCTGTaGTTGGGTTCGAACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGPHCQL*LGSNSF Trigger: GAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGG...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR GCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCCGAAGGCTCCAGTTTaGACCCCGCCCCGCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKPKAPV*TPPRFQ Trigger: CTGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGG...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACCGAAGGCTCCAGTTTaGACCCCGCCCCGCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTPKAPV*TPPRFQ Trigger: CTGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGG...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCCGAAGGCTCCAGTTTaGACCCCGCCCCGCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTHMHSEPRLGKQGGDPKAPV*TPPRFQ Trigger: CTGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGG...ATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCGCTTCCTCCAGAAGATaGCCCCCAAAGCCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGASSRR*PPKPAM Trigger: CATGGCGGGCTTTGGGGGGCATCTTCTGGAGGAAGC...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCCTGGGCCGGGAGACTaGGGGTCCCATAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKPGPGD*GSHKSS Trigger: GGATGACTTATGGGACCCCCAGTCTCCCGGCCCAGG...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCGCGATGAAATTGTACTaGCTCCGGGGAGAAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTAMKLY*LRGEVG Trigger: ACCCACTTCTCCCCGGAGCCAGTACAATTTCATCGC...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCCGATCAGCCACCACGTaGGCGTTGGTAACGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKARRRSGQELHTLAGPVRSATT*ALVTMS Trigger: GCTCATCGTTACCAACGCCCACGTGGTGGCTGATCG...GACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACAGCCGCAGACCAGCCCTaGGAGTCAGGGTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTAADQP*ESGSAS Trigger: TGATGCTGACCCTGACTCCCAGGGCTGGTCTGCGGC...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCGCCGCAGACCAGCCCTaGGAGTCAGGGTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFAADQP*ESGSAS Trigger: TGATGCTGACCCTGACTCCCAGGGCTGGTCTGCGGC...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCACTGGTCACTGGAGCCTaGAGTCCCCACATTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: GKQGGDQGKSFTLLPVQSLVTGA*SPHIQS Trigger: CGATTGAATGTGGGGACTTCAGGCTCCAGTGACCAG...TGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR TCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGACCACCACATCTGCGATaGAATTGTACTGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGPPHLR*NCTGSG Trigger: CCCGGAGCCAGTACAATTTCATCGCAGATGTGGTGG...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTRGSLV*ILSVAM Trigger: CATTGCCACACTGAGGATTCAAACCAAGGAGCCTCT...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACAGCTTCCTCCAGAAGATaGCCCCCAAAGCCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTASSRR*PPKPAM Trigger: CATGGCGGGCTTTGGGGGGCATCTTCTGGAGGAAGC...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGCACCACTGCACCTCCTaGGCCCACCGCCACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGHHCTS*AHRHRQ Trigger: CTGGCGGTGGCGGTGGGCGCAGGAGGTGCAGTGGTG...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | CGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCATAAACATACAACAAACTCCCCTTaGCGGACATCAGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSALPAVIGFEQLHKHTTNSP*RTSAER Trigger: CCGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGT...ATGTTTATGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCGATCGTGTTCTGCAGTaGAAAGGGGCTTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVDRVLQ*KGASHG Trigger: GCCATGGGAAGCCCCTTTGCACTGCAGAACACGATC...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTTTCTTTTCCCCGCGATaGAGAAACTCCCTAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRLEGLALRRFTDSSSFFSPR*RNSLRR Trigger: TCGCCTTAGGGAGTTTCTGCATCGCGGGGAAAAGAA...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR CCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAACCTGGGCCGGGAGACTaGGGGTCCCATAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQPGPGD*GSHKSS Trigger: GGATGACTTATGGGACCCCCAGTCTCCCGGCCCAGG...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCCGATCAGCCACCACGTaGGCGTTGGTAACGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGRSATT*ALVTMS Trigger: GCTCATCGTTACCAACGCCCACGTGGTGGCTGATCG...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTTGGGAAGAGGCTCCTTaGTTTGAATCCTCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMQRLEGLALRRFTDSSSWEEAP*FESSVW Trigger: CCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCA...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATGGCCGAGGGGCAGTGTaGGAAGAGGCTCCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTHMHSEPRLGKQGGDGRGAV*EEAPWF Trigger: AAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCC...ATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTCTGATCCGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACACAAAGGGGCTTCCCATaGCAACAACAAACTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSDPRRIRTASCDWVRTQRGFP*QQQTPL Trigger: AAGGGGAGTTTGTTGTTGCCATGGGAAGCCCCTTTG...TGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCGGATCAGAGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR TCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGATATTCCACGTTGTTTTaGGGGAGTCCCAGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGYSTLF*GSPRSL Trigger: CAGGGACCTGGGACTCCCTCAAAACAACGTGGAATA...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR TCA 90 bp | GAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGCACTGCCAGCTGTaGTTGGGTTCGAACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRLGKQGGDQGKSFTLLPHCQL*LGSNSF Trigger: GAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGG...CAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR TCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACCGCACTGCCAGCTGTaGTTGGGTTCGAACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTPHCQL*LGSNSF Trigger: GAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGG...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGGGCTTCCAGGGCTCCTaGGGGCCTCCTGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGGFQGS*GPPGHW Trigger: CCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCC...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVQCGNV*YGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTG...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCACAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKQGGDQGKSFTLLPVQSQCGNV*YGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTG...TGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | CGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCATAAACATCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSALPAVIGFEQLHKHQCGNV*YGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTG...ATGTTTATGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCAGGATAACTTTATGAATGAGGACACCATGCTGAACATCAGGGAAGCTCCTGGGCCGGGAGACTaGGGGTCCCATAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GAQDNFMNEDTMLNIREAPGPGD*GSHKSS Trigger: GGATGACTTATGGGACCCCCAGTCTCCCGGCCCAGG...AGCTTCCCTGATGTTCAGCATGGTGTCCTCATTCATAAAGTTATCCTGGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCGCGATGAAATTGTACTaGCTCCGGGGAGAAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKARRRSGQELHTLAGPVAMKLY*LRGEVG Trigger: ACCCACTTCTCCCCGGAGCCAGTACAATTTCATCGC...GACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | GTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGCGCCGGATCCGCTTTGAATCCTCAGTGTaGCAATGTCTGCTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSGVTYKVSVSDPRRIRFESSV*QCLLRD Trigger: ATCCCGTAGCAGACATTGCCACACTGAGGATTCAAA...GCGGATCCGGCGCGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTACCCCAATTTCTCCCCAATaGCCAAGATCACATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQRLEGLALRRFTDSSSTPISPQ*PRSHHQ Trigger: CTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGG...GGTAGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTCCAATTTCTCCCCAATaGCCAAGATCACATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQRLEGLALRRFTDSSSPISPQ*PRSHHQ Trigger: CTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGG...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS-3UTR TCA 90 bp | TCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCATAAACATCTTCAGCATTCCCTGGCTGGGCGCTaGGCAGAGCTGACAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: SALPAVIGFEQLHKHLQHSLAGR*AELTIP Trigger: TGGTATTGTCAGCTCTGCTCAGCGCCCAGCCAGGGA...ATGCTGAAGATGTTTATGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTCACATATAAGGTCAGTGTCTCTGATCCGCGCCGGATCCGCACTGCCAGCATAGCTGCATCGGTCTaGATGTATTCCACGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVTYKVSVSDPRRIRTASIAASV*MYSTLF Trigger: AAACAACGTGGAATACATTCAGACCGATGCAGCTAT...GCTGGCAGTGCGGATCCGGCGCGGATCAGAGACACTGACCTTATATGTGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | CCGCAGACCAGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACCTTCTCCACCACATCTaGGATGAAATTGTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTSPVCGGAQDNFMNEDLLHHI*DEIVLA Trigger: AGCCAGTACAATTTCATCGCAGATGTGGTGGAGAAG...GTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCTGGTCTGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGACAACAAACTCCCCTTaGCGGACATCAGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKTTNSP*RTSAER Trigger: CCGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGT...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACAACAAACTCCCCTTaGCGGACATCAGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFTTNSP*RTSAER Trigger: CCGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGT...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACAGATCGTGTTCTGCAGTaGAAAGGGGCTTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTDRVLQ*KGASHG Trigger: GCCATGGGAAGCCCCTTTGCACTGCAGAACACGATC...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | ACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGATCGTGTTCTGCAGTaGAAAGGGGCTTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSSSTHMHSEPRLGKQGDRVLQ*KGASHG Trigger: GCCATGGGAAGCCCCTTTGCACTGCAGAACACGATC...TCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCCAAGATCACATCACCAGGCCGCAGACCAGCCCTGTGTGCGGGGGAGCTCCAAAATCAATAGCTaGATCGGTCTGAATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: QWPRSHHQAADQPCVRGSSKINS*IGLNVF Trigger: GAATACATTCAGACCGATGCAGCTATTGATTTTGGA...GCTCCCCCGCACACAGGGCTGGTCTGCGGCCTGGTGATGTGATCTTGGCCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCATTCTTTTCCCCGCGATaGAGAAACTCCCTAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GKQGGDQGKSFTLLPVQSFFSPR*RNSLRR Trigger: TCGCCTTAGGGAGTTTCTGCATCGCGGGGAAAAGAA...TGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR CCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGPGRSG*RSRNSS Trigger: GCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGG...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCGCGATGAAATTGTACTaGCTCCGGGGAGAAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMHSEPRLGKQGGDQGKSAMKLY*LRGEVG Trigger: ACCCACTTCTCCCCGGAGCCAGTACAATTTCATCGC...GCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCCTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFLIRLR*GLHGRR Trigger: TCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAG...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAACGATCAGCCACCACGTaGGCGTTGGTAACGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQRSATT*ALVTMS Trigger: GCTCATCGTTACCAACGCCCACGTGGTGGCTGATCG...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | TCTGATCCGCGCCGGATCCGCACTGCCAGCTGTGATTGGGTTCGAACAGCTTCATTTGAATCCTCAGTGTaGCAATGTCTGCTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDPRRIRTASCDWVRTASFESSV*QCLLRD Trigger: ATCCCGTAGCAGACATTGCCACACTGAGGATTCAAA...TGAAGCTGTTCGAACCCAATCACAGCTGGCAGTGCGGATCCGGCGCGGATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCATGGGAAGAGGCTCCTTaGTTTGAATCCTCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQGGDQGKSFTLLPVQSWEEAP*FESSVW Trigger: CCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCA...TGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | AGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCCAAAGGGGCTTCCCATaGCAACAACAAACTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKARRRSGQELHTLAGPVQRGFP*QQQTPL Trigger: AAGGGGAGTTTGTTGTTGCCATGGGAAGCCCCTTTG...GACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGRGSLV*ILSVAM Trigger: CATTGCCACACTGAGGATTCAAACCAAGGAGCCTCT...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | GAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGTATTCCACGTTGTTTTaGGGGAGTCCCAGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPRLGKQGGDQGKSFTLLYSTLF*GSPRSL Trigger: CAGGGACCTGGGACTCCCTCAAAACAACGTGGAATA...CAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | ATTTTGTGCCAATTTCTCCCCAATGGCCAAGATCACATCACCAGGCCGCAGACCCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILCQFLPNGQDHITRPQTQCGNV*YGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTG...GGTCTGCGGCCTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGGCACAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGTTCTTTTCCCCGCGATaGAGAAACTCCCAGGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPFFSPR*RNSQVN Trigger: GTTAACCTGGGAGTTTCTGCATCGCGGGGAAAAGAA...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGCCTGGGCCGGGAGACTaGGGGTCCCATAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGPGPGD*GSHKSS Trigger: GGATGACTTATGGGACCCCCAGTCTCCCGGCCCAGG...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGCAGCAGCCAGCACCGTaGAAAGACCCCGACCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGQQPAP*KDPDPN Trigger: GTTGGGGTCGGGGTCTTTCCACGGTGCTGGCTGCTG...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCCAAAGGGGCTTCCCATaGCAACAACAAACTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMHSEPRLGKQGGDQGKSQRGFP*QQQTPL Trigger: AAGGGGAGTTTGTTGTTGCCATGGGAAGCCCCTTTG...GCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | GTCATTCATTCTGTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGTATTCCACGTTGTTTTaGGGGAGTCCCAGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIHSVTSGVTYKVSVSDPYSTLF*GSPRSL Trigger: CAGGGACCTGGGACTCCCTCAAAACAACGTGGAATA...CGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCACAGAATGAATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | TATAAGGTCAGTGTCTCTGATCCGCGCCGGATCCGCACTGCCAGCTGTGATTGGATAGCTGCATCGGTCTaGATGTATTCCACGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKVSVSDPRRIRTASCDWIAASV*MYSTLF Trigger: AAACAACGTGGAATACATTCAGACCGATGCAGCTAT...CCAATCACAGCTGGCAGTGCGGATCCGGCGCGGATCAGAGACACTGACCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGCTTCTCCACCACATCTaGGATGAAATTGTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPLLHHI*DEIVLA Trigger: AGCCAGTACAATTTCATCGCAGATGTGGTGGAGAAG...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR GCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCTTCTTTTCCCCGCGATaGAGAAACTCCCTAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFFFSPR*RNSLRR Trigger: TCGCCTTAGGGAGTTTCTGCATCGCGGGGAAAAGAA...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR CCA 90 bp | CAGGATAACTTTATGAATGAGGACACCATGCTGAACATCAGGGAAGCTTGGCTCCGATCAGCCACCACGTaGGCGTTGGTAACGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDNFMNEDTMLNIREAWLRSATT*ALVTMS Trigger: GCTCATCGTTACCAACGCCCACGTGGTGGCTGATCG...GAGCCAAGCTTCCCTGATGTTCAGCATGGTGTCCTCATTCATAAAGTTATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGATTTGAATCCTCAGTGTaGCAATGTCTGCTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGFESSV*QCLLRD Trigger: ATCCCGTAGCAGACATTGCCACACTGAGGATTCAAA...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGATGGGAAGAGGCTCCTTaGTTTGAATCCTCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDSSSTHMHSEPRLGKQGWEEAP*FESSVW Trigger: CCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCA...TCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCCCAATTTCTCCCCAATaGCCAAGATCACATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGPISPQ*PRSHHQ Trigger: CTGGTGATGTGATCTTGGCCATTGGGGAGAAATTGG...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR TCA 90 bp | GTCATTCATTCTGTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTGATCCGAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VIHSVTSGVTYKVSVSDPRGSLV*ILSVAM Trigger: CATTGCCACACTGAGGATTCAAACCAAGGAGCCTCT...CGGATCAGAGACACTGACCTTATATGTGACCCCCGAGGTCACAGAATGAATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGTCATTCATTCTGTGACCTCGGGGGTCACATATAAGGTCAGTGTCTCTTGGGAAGAGGCTCCTTaGTTTGAATCCTCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVIHSVTSGVTYKVSVSWEEAP*FESSVW Trigger: CCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCA...AGAGACACTGACCTTATATGTGACCCCCGAGGTCACAGAATGAATGACTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAACAAAGGGGCTTCCCATaGCAACAACAAACTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQQRGFP*QQQTPL Trigger: AAGGGGAGTTTGTTGTTGCCATGGGAAGCCCCTTTG...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGACAGCTGTCACCTTCATaGTGTTCACTCCAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TDSSSTHMHSEPRLGKQGQLSPS*CSLQSP Trigger: AGGTGATTGGAGTGAACACCATGAAGGTGACAGCTG...TCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR CCA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAGCTGTCACCTTCATaGTGTTCACTCCAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKQLSPS*CSLQSP Trigger: AGGTGATTGGAGTGAACACCATGAAGGTGACAGCTG...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR GCA 90 bp | AACATCTTCAGCATTTTGTGCCAATTTCTCCCCAATGGCCAAGATCACATCACCACAACAAACTCCCCTTaGCGGACATCAGCAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NIFSILCQFLPNGQDHITTTNSP*RTSAER Trigger: CCGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGT...GGTGATGTGATCTTGGCCATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGCTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGLIRLR*GLHGRR Trigger: TCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAG...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CCA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCTTTGAATCCTCAGTGTaGCAATGTCTGCTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFFESSV*QCLLRD Trigger: ATCCCGTAGCAGACATTGCCACACTGAGGATTCAAA...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGTATTCCACGTTGTTTTaGGGGAGTCCCAGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGYSTLF*GSPRSL Trigger: CAGGGACCTGGGACTCCCTCAAAACAACGTGGAATA...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR TCA 90 bp | GAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGATAGCTGCATCGGTCTaGATGTATTCCACGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPRLGKQGGDQGKSFTLLIAASV*MYSTLF Trigger: AAACAACGTGGAATACATTCAGACCGATGCAGCTAT...CAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR TCA 90 bp | CACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACAATAGCTGCATCGGTCTaGATGTATTCCACGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSEPRLGKQGGDQGKSFTIAASV*MYSTLF Trigger: AAACAACGTGGAATACATTCAGACCGATGCAGCTAT...TGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | CGCAGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGATCCAAAATCAATAGCTaGATCGGTCTGAATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: RRFTDSSSTHMHSEPRLGSKINS*IGLNVF Trigger: GAATACATTCAGACCGATGCAGCTATTGATTTTGGA...TCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACACCATGCTGTCCAAAATCAATAGCTaGATCGGTCTGAATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCGGAQDNFMNEDTMLSKINS*IGLNVF Trigger: GAATACATTCAGACCGATGCAGCTATTGATTTTGGA...CAGCATGGTGTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CCA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAATTTGAATCCTCAGTGTaGCAATGTCTGCTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQFESSV*QCLLRD Trigger: ATCCCGTAGCAGACATTGCCACACTGAGGATTCAAA...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR GCA 90 bp | TTCATAAACATCTTCAGCATTTTGTGCCAATTTCTCCCCAATGGCCAAGATCACGATCGTGTTCTGCAGTaGAAAGGGGCTTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FINIFSILCQFLPNGQDHDRVLQ*KGASHG Trigger: GCCATGGGAAGCCCCTTTGCACTGCAGAACACGATC...GTGATCTTGGCCATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR GCA 90 bp | TCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCTCCAAAATCAATAGCTaGATCGGTCTGAATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: STHMHSEPRLGKQGGDQGSKINS*IGLNVF Trigger: GAATACATTCAGACCGATGCAGCTATTGATTTTGGA...GCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGCAGAATTTCCAAACTTaGTTTGAATCCTCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTHMHSEPRLGKQGGDQQNFQT*FESSVW Trigger: CCACACTGAGGATTCAAACCAAGTTTGGAAATTCTG...CTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113962.8 |
||
| CDS TCA 90 bp | CCGACGGCTTCCAGGGCTCCTGCGGGCCTCCTGGTCACTGGAGCCTaGAGTCCCCACATTCAATCGTGCCCAGAGATCCGGGGTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTASRAPAGLLVTGA*SPHIQSCPEIRGPR Trigger: TCTAGGACCCCGGATCTCTGGGCACGATTGAATGTGGGGACTTCAGGCTCCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCCGTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS CCA 90 bp | CTGCCCGTGATGCAAGGAACCCCTCAGGCACCTGGGCCGGGAGACTaGGGGTCCCATAAGTCATCCAGATCTGAGAGTCAGGAGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPVMQGTPQAPGPGD*GSHKSSRSESQEFL Trigger: CAGGAACTCCTGACTCTCAGATCTGGATGACTTATGGGACCCCCAGTCTCCCGGCCCAGGTGCCTGAGGGGTTCCTTGCATCACGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS CCA 90 bp | CACCACATCTGCGATGAAATTGTACTGGCTCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGCCAGCACCGTGGAAAGACCCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: HHICDEIVLAPGRSG*RSRNSSQHRGKTPT Trigger: GGTCGGGGTCTTTCCACGGTGCTGGCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGGAGCCAGTACAATTTCATCGCAGATGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS CCA 90 bp | CCGCTAGGCAGCCTCACTCGTACTCGGCGCCGATCAGCCACCACGTaGGCGTTGGTAACGATGAGCCCATCTGAAGCCACTACGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGSLTRTRRRSATT*ALVTMSPSEATTNP Trigger: AGGATTCGTAGTGGCTTCAGATGGGCTCATCGTTACCAACGCCCACGTGGTGGCTGATCGGCGCCGAGTACGAGTGAGGCTGCCTAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAATGGCCAAGATCACATCACCAGGCCGCAGACCAGCCCTGTGTGCGGGGAACAACAAACTCCCCTaGCCGGACATCAGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPMAKITSPGRRPALCAGNNKLP*PDISRA Trigger: CGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGTT...CCCCGCACACAGGGCTGGTCTGCGGCCTGGTGATGTGATCTTGGCCATTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCCCCGAAGGCTCCAGTTaGCACCCCGCCCCGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKARRRSGQELHTLAGPVPEGSS*HPAPLS Trigger: TGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGGG...GACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS TCA 90 bp | TCAGCAGAGCGGCCGAGGGGCAGTGTGGGAAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATGTCTGCTACGGGATCCACAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAERPRGSVGRGSLV*ILSVAMSATGSTAV Trigger: CACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCGCTCTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS CCA 90 bp | GGACATCAGCAGAGCGGCCGAGGGGCAGTGTGGGAAGAGGCTCCTTaGTTTGAATCCTCAGTGTGGCAATGTCTGCTACGGGATCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GHQQSGRGAVWEEAP*FESSVWQCLLRDPQ Trigger: CTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCGCTCTGCTGATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 90 bp | CAAACTCCCCTTGCCGGACATCAGCAGAGCGGCCGAGGGGCAGTGTaGGAAGAGGCTCCTTGGTTTGAATCCTCAGTGTGGCAATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTPLAGHQQSGRGAV*EEAPWFESSVWQCL Trigger: CAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCGCTCTGCTGATGTCCGGCAAGGGGAGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCCCGAAGGCTCCAGTTaGCACCCCGCCCCGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKPEGSS*HPAPLS Trigger: TGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGGG...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGAACAACAAACTCCCCTaGCCGGACATCAGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPNNKLP*PDISRA Trigger: CGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGTT...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CAA 90 bp | CAGGATAACTTTATGAATGAGGACACCATGCTGAACATCAGGGAAGCTTGGCTCCCCGAAGGCTCCAGTTaGCACCCCGCCCCGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDNFMNEDTMLNIREAWLPEGSS*HPAPLS Trigger: TGAAAGCGGGGCGGGGTGCAAACTGGAGCCTTCGGG...GAGCCAAGCTTCCCTGATGTTCAGCATGGTGTCCTCATTCATAAAGTTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122955.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVVFHVV*RESQVP Trigger: AGGGACCTGGGACTCCCTCAAAACAACGTGGAATAC...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRLGKQGGDQGKSFTLLPVFHVV*RESQVP Trigger: AGGGACCTGGGACTCCCTCAAAACAACGTGGAATAC...CGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACACCATGCTGGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVCGGAQDNFMNEDTMLVFHVV*RESQVP Trigger: AGGGACCTGGGACTCCCTCAAAACAACGTGGAATAC...CAGCATGGTGTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
||
| CDS GCA 90 bp | TGTGGGAAGAGGCTCCTTGGTTTGAATCCTCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGTGACCATGGCCTCATAAGTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGKRLLGLNPQCGNV*YGIHSCDHGLISIP Trigger: GGGGATACTTATGAGGCCATGGTCACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 90 bp | CTGAATGTATTCCACGTTGTTTTGAGGGAGTCCCAGGTCCCTGGCTaGGCGCTGAGCAGAGCTGACAATACCAGATGTGATCGTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNVFHVVLRESQVPG*ALSRADNTRCDRVL Trigger: CAGAACACGATCACATCTGGTATTGTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCCCTCAAAACAACGTGGAATACATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 90 bp | TCAGGGTCAGCATCATCACTCCAATGTAGCGGCGCTGGGACCCACTaGTTCCAAACCAGGAATCTGGGGCATGGATTCTTAGAAGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSASSLQCSGAGTH*FQTRNLGHGFLEEH Trigger: GTGTTCTTCTAAGAATCCATGCCCCAGATTCCTGGTTTGGAACCAGTGGGTCCCAGCGCCGCTACATTGGAGTGATGATGCTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150217.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCAACATCTGCGATGAAATaGTACTGGCTCCGGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GKQGGDQGKSFTLLPVQSTSAMK*YWLRGE Trigger: TTCTCCCCGGAGCCAGTACAATTTCATCGCAGATGT...TGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CAA 90 bp | CAGACCAGCCCTGTGTGCGGGGGAGCCCAGGATAACTTTATGAATGAGGACACCAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QTSPVCGGAQDNFMNEDTKRLLG*NPQCGN Trigger: ATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTT...GGTGTCCTCATTCATAAAGTTATCCTGGGCTCCCCCGCACACAGGGCTGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CAA 90 bp | ATGCACTCAGAACCTAGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCAACAACAAACTCCCCTaGCCGGACATCAGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: MHSEPRLGKQGGDQGKSFNNKLP*PDISRA Trigger: CGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGTT...GAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCTAGGTTCTGAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS GCA 90 bp | TGTGGGAAGAGGCTCCTTGGTTTGAATCCTCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGTGACCATGGCCTCATAAGTATCCCN | + |
|
Preference number: 5 (lower is better) Translates to: CGKRLLGLNPQCGNV*YGIHSCDHGLISIP Trigger: NGGGATACTTATGAGGCCATGGTCACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132099.8 |
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| CDS-3UTR CAA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVKRLLG*NPQCGN Trigger: ATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTT...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKARRRSGQELHTLAGPVKRLLG*NPQCGN Trigger: ATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTT...GACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCCAGTCATTCATTCTGTGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEIRARASHSCRSSHSFCVFHVV*RESQVP Trigger: AGGGACCTGGGACTCCCTCAAAACAACGTGGAATAC...ACAGAATGAATGACTGGACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122955.8 ENSMUST00000132099.8 |
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| CDS-3UTR CAA 90 bp | CTGATGCAGCGGTTAGAGGGACTTGCCCTCCGCAGGTTCACTGACTCCTCCTCTAACATCTTCAGCATTTaGTGCCAATTTCTCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LMQRLEGLALRRFTDSSSNIFSI*CQFLPN Trigger: ATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTT...AGAGGAGGAGTCAGTGAACCTGCGGAGGGCAAGTCCCTCTAACCGCTGCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGCAAACATCTGCGATGAAATaGTACTGGCTCCGGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FTDSSSTHMHSEPRLGKQTSAMK*YWLRGE Trigger: TTCTCCCCGGAGCCAGTACAATTTCATCGCAGATGT...TTGCTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CAA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKKRLLG*NPQCGN Trigger: ATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTT...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS GCA 90 bp | ACCAGAATTTCCAAACTTGGTTTGAATCCTCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGTGACCATGGCCTCATAAGTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRISKLGLNPQCGNV*YGIHSCDHGLISIP Trigger: GGGGATACTTATGAGGCCATGGTCACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGTTTGGAAATTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113962.8 |
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| CDS-3UTR CAA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGAACAACAAACTCCCCTaGCCGGACATCAGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGNNKLP*PDISRA Trigger: CGCTCTGCTGATGTCCGGCAAGGGGAGTTTGTTGTT...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS-3UTR CAA 90 bp | AGGCTAGGAAAGCAAGGAGGAGATCAGGGCAAGAGCTTCACACTCTTGCCGGTCAACATCTTCAGCATTTaGTGCCAATTTCTCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLGKQGGDQGKSFTLLPVNIFSI*CQFLPN Trigger: ATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTT...GACCGGCAAGAGTGTGAAGCTCTTGCCCTGATCTCCTCCTTGCTTTCCTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
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| CDS-3UTR CAA 90 bp | AGGTTCACTGACTCCTCCTCTACCCACATGCACTCAGAACCTAGGCTAGGAAAGATTTCCAAACTTGGTTaGAATCCTCAGTGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RFTDSSSTHMHSEPRLGKISKLG*NPQCGN Trigger: ATTGCCACACTGAGGATTCAAACCAAGTTTGGAAAT...CTTTCCTAGCCTAGGTTCTGAGTGCATGTGGGTAGAGGAGGAGTCAGTGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113962.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTATATAAAATGTGTTCTTCGGAGCCCAGGACTGATGCAGCGGTTAGAGGGAACATCTTCAGCATTTaGTGCCAATTTCTCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILYKMCSSEPRTDAAVRGNIFSI*CQFLPN Trigger: ATTGGGGAGAAATTGGCACAAAATGCTGAAGATGTT...CCCTCTAACCGCTGCATCAGTCCTGGGCTCCGAAGAACACATTTTATATAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 |
||
| CDS GCA 72 bp | CCGCCAGCCATTCGCGCCGACGGCTTCCAGGGCTCCTaGGGGCCTCCTGGTCACTGGAGCCTGAAGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPAIRADGFQGS*GPPGHWSLKSP Trigger: TGGGGACTTCAGGCTCCAGTGACCAGGAGGCCCGCAGGAGCCCTGGAAGCCGTCGGCGCGAATGGCTGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
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| CDS CAA 90 bp | GGCAGCCTCACTCGTACTCGGCGCCGATCAGCCACCACGTGGGCGTaGGTAACGATGAGCCCATCTGAAGCCACTACGAATCCTGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSLTRTRRRSATTWA*VTMSPSEATTNPDP Trigger: CGGATCAGGATTCGTAGTGGCTTCAGATGGGCTCATCGTTACCAACGCCCACGTGGTGGCTGATCGGCGCCGAGTACGAGTGAGGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 72 bp | AGCCTCACTCGTACTCGGCGCCGATCAGCCACCACGTaGGCGTTGGTAACGATGAGCCCATCTGAAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SLTRTRRRSATT*ALVTMSPSEAT Trigger: AGTGGCTTCAGATGGGCTCATCGTTACCAACGCCCACGTGGTGGCTGATCGGCGCCGAGTACGAGTGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS TCA 72 bp | CGGCCGAGGGGCAGTGTGGGAAGAGGCTCCTTGGTTTaGATCCTCAGTGTGGCAATGTCTGCTACGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RPRGSVGRGSLV*ILSVAMSATGS Trigger: GGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS CCA 72 bp | TGCGATGAAATTGTACTGGCTCCGGGGAGAAGTGGGTaGCGGAGCAGGAACAGCAGCCAGCACCGTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CDEIVLAPGRSG*RSRNSSQHRGK Trigger: CTTTCCACGGTGCTGGCTGCTGTTCCTGCTCCGCCACCCACTTCTCCCCGGAGCCAGTACAATTTCATCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 |
||
| CDS CAA 72 bp | GCGGCCGAGGGGCAGTGTGGGAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAATGTCTGCTACGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: AAEGQCGKRLLG*NPQCGNVCYGI Trigger: GATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS CAA 90 bp | ATCAGCAGAGCGGCCGAGGGGCAGTGTGGGAAGAGGCTCCTTGGTTaGAATCCTCAGTGTGGCAATGTCTGCTACGGGATCCACAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISRAAEGQCGKRLLG*NPQCGNVCYGIHSC Trigger: ACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCTCTTCCCACACTGCCCCTCGGCCGCTCTGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS CAA 72 bp | ACTCGTACTCGGCGCCGATCAGCCACCACGTGGGCGTaGGTAACGATGAGCCCATCTGAAGCCACTACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRTRRRSATTWA*VTMSPSEATTN Trigger: ATTCGTAGTGGCTTCAGATGGGCTCATCGTTACCAACGCCCACGTGGTGGCTGATCGGCGCCGAGTACGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
||
| CDS CCA 72 bp | CATCTGAAGCCACTACGAATCCTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGAAAGGGTGCCGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: HLKPLRILIRLR*GLHGRRKGAGL Trigger: TAGACCGGCACCCTTTCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAGGATTCGTAGTGGCTTCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089645.13 ENSMUST00000113962.8 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000150217.2 |
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| CDS CCA 72 bp | CATCTGAAGCCACTACGAATCCTGATCCGTTTGAGATaGGGACTTCACGGCCGGAGAAAGGGTGCCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HLKPLRILIRLR*GLHGRRKGAWD Trigger: ATCCCAGGCACCCTTTCTCCGGCCGTGAAGTCCCCATCTCAAACGGATCAGGATTCGTAGTGGCTTCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134606.8 |
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| CDS CAA 72 bp | AATAGCTGCATCGGTCTGAATGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCTGGCTGGGCGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: NSCIGLNVFHVV*RESQVPGWALS Trigger: GCTCAGCGCCCAGCCAGGGACCTGGGACTCCCTCAAAACAACGTGGAATACATTCAGACCGATGCAGCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 72 bp | GCATCATCACTCCAATGTAGCGGCGCTGGGACCCACTaGTTCCAAACCAGGAATCTGGGGCATGGATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASSLQCSGAGTH*FQTRNLGHGFL Trigger: TAAGAATCCATGCCCCAGATTCCTGGTTTGGAACCAGTGGGTCCCAGCGCCGCTACATTGGAGTGATGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150217.2 |
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| CDS CAA 90 bp | TCCAAAATCAATAGCTGCATCGGTCTGAATGTATTCCACGTTGTTTaGAGGGAGTCCCAGGTCCCTGGCTGGGCGCTGAGCAGAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SKINSCIGLNVFHVV*RESQVPGWALSRAD Trigger: GTCAGCTCTGCTCAGCGCCCAGCCAGGGACCTGGGACTCCCTCAAAACAACGTGGAATACATTCAGACCGATGCAGCTATTGATTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS GCA 72 bp | AGGCTCCTTGGTTTGAATCCTCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGTGACCATGGCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: RLLGLNPQCGNV*YGIHSCDHGLI Trigger: TATGAGGCCATGGTCACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000089645.13 ENSMUST00000113963.8 ENSMUST00000122955.8 ENSMUST00000132099.8 ENSMUST00000134606.8 ENSMUST00000150217.2 |
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| CDS CCA 72 bp | TGGGACCCACTGGTTCCAAACCAGGAATCTGGGGCATaGATTCTTAGAAGAACACGGACACTCACCAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: WDPLVPNQESGA*ILRRTRTLTRL Trigger: TAACCTGGTGAGTGTCCGTGTTCTTCTAAGAATCCATGCCCCAGATTCCTGGTTTGGAACCAGTGGGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150217.2 |
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| CDS GCA 72 bp | TCCAAACTTGGTTTGAATCCTCAGTGTGGCAATGTCTaGTACGGGATCCACAGCTGTGACCATGGCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: SKLGLNPQCGNV*YGIHSCDHGLI Trigger: TATGAGGCCATGGTCACAGCTGTGGATCCCGTAGCAGACATTGCCACACTGAGGATTCAAACCAAGTTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113962.8 |
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